ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5p04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G13, full insert sequence Length = 2478 Score = 246 bits (124), Expect = 7e-62 Identities = 218/249 (87%), Gaps = 4/249 (1%) Strand = Plus / Plus Query: 375 ggacagtggaatgacaagaagactcatctgaccacttgcgatccgcatgcgaaacgtata 434 ||||||||||||||||||||||| | ||||||||||| ||||| ||||| |||| |||| Sbjct: 816 ggacagtggaatgacaagaagacccgcctgaccacttgtgatcctcatgcaaaacatata 875 Query: 435 attacatcctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatac 494 |||||||| ||||||||||| |||||||||||||||||||||||||| | || || || Sbjct: 876 attacatcatctgattctccccaggaggttgaagttggcaaagacataatatttacttat 935 Query: 495 gatgtggatttcaaggagagtgatatcaagtgggcatctc----gctgggatagttatct 550 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 936 gatgtggatttcaaggagagtgatatcaagtgggcatctcgctggctgggatacctatct 995 Query: 551 gctgatgacagatgatcaaatccattggttctccattgtaaattctctcatgatcgttct 610 |||||||| ||||| |||||||| ||||| |||||||| ||||| |||||||| | || Sbjct: 996 actgatgacggatgaccaaatccactggttttccattgtgaattccctcatgattatcct 1055 Query: 611 cttcctttc 619 ||||||||| Sbjct: 1056 cttcctttc 1064 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 132 aacatgattcttgacaatctacctctagttgttcctattcaaagagtggatcaagaaggt 191 ||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||| Sbjct: 543 aacatgattcttgacaacttacctctagttgttccaattaaaagaatggaccaagaaggt 602 Query: 192 gcttatttctatcaacatgggttccatgttggagccaaaggacaatactcagggagtaag 251 || ||||||||||| |||| |||||||||||||||||||||||||| || |||| ||| Sbjct: 603 gcatatttctatcagcatgtcttccatgttggagccaaaggacaatatgcaaggagcaag 662 Query: 252 gatgaaaagtacttcatccacaatcatttgtcctttacggtgaaatatcacagggatgca 311 ||||||||| |||||| ||||| ||||| || ||||| ||||| |||||||||||||| Sbjct: 663 gatgaaaagagcttcattcacaaccatttatcatttactgtgaagtatcacagggatgcc 722 Query: 312 cagagggatgtttctaggatagtggcctttgaagtaaaaccctacagt 359 || |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 723 caaagggatgtttctaggatagttgcatttgaagtgaaaccatacagt 770 Score = 129 bits (65), Expect = 1e-26 Identities = 102/113 (90%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 26 gtttgaaatgagggtacctcagatg-tgtcaaatagtctgcaagatttcagttggggaaa 84 |||||||||||| | ||||| ||| ||||||||||||||||||||||| || ||||| | Sbjct: 354 gtttgaaatgagagagcctcaaatgctgtcaaatagtctgcaagatttctgtcggggaga 413 Query: 85 aagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 aagaagcaaagattctcaaggaaaagattgaagatgagtaccgtgtgaacatg 466
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 151 bits (76), Expect = 3e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 375 ggacagtggaatgacaagaagactcatctgaccacttgcgatccgcatgcgaaacgtata 434 ||||||||||||||||||||||| | ||||||||||| ||||| ||||| |||| |||| Sbjct: 10617232 ggacagtggaatgacaagaagacccgcctgaccacttgtgatcctcatgcaaaacatata 10617173 Query: 435 attacatcctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatac 494 |||||||| ||||||||||| |||||||||||||||||||||||||| | || || || Sbjct: 10617172 attacatcatctgattctccccaggaggttgaagttggcaaagacataatatttacttat 10617113 Query: 495 gatgtggatttcaagg 510 |||||||||||||||| Sbjct: 10617112 gatgtggatttcaagg 10617097 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 132 aacatgattcttgacaatctacctctagttgttcctattcaaagagtggatcaagaaggt 191 ||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||| Sbjct: 10617677 aacatgattcttgacaacttacctctagttgttccaattaaaagaatggaccaagaaggt 10617618 Query: 192 gcttatttctatcaacatgggttccatgttggagccaaaggacaata 238 || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 10617617 gcatatttctatcagcatgtcttccatgttggagccaaaggacaata 10617571 Score = 129 bits (65), Expect = 1e-26 Identities = 102/113 (90%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 26 gtttgaaatgagggtacctcagatg-tgtcaaatagtctgcaagatttcagttggggaaa 84 |||||||||||| | ||||| ||| ||||||||||||||||||||||| || ||||| | Sbjct: 10617866 gtttgaaatgagagagcctcaaatgctgtcaaatagtctgcaagatttctgtcggggaga 10617807 Query: 85 aagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10617806 aagaagcaaagattctcaaggaaaagattgaagatgagtaccgtgtgaacatg 10617754 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 27785448 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 27785507 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 27785508 aaattcactggttctctattgtgaactctctcatgatcgt 27785547 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 27766090 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 27766149 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 27766150 aaattcactggttctctattgtgaactctctcatgatcgt 27766189 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 27757156 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 27757215 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 27757216 aaattcactggttctctattgtgaactctctcatgatcgt 27757255 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 249 aaggatgaaaagtacttcatccacaatcatttgtcctttacggtgaaatatcacagggat 308 |||||||||||| |||||| ||||| ||||| || ||||| ||||| |||||||||||| Sbjct: 10617467 aaggatgaaaagagcttcattcacaaccatttatcatttactgtgaagtatcacagggat 10617408 Query: 309 gcacagagggatgtttctaggatagtggcctttgaagtaaaaccctacagt 359 || || |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 10617407 gcccaaagggatgtttctaggatagttgcatttgaagtgaaaccatacagt 10617357 Score = 101 bits (51), Expect = 3e-18 Identities = 100/116 (86%), Gaps = 4/116 (3%) Strand = Plus / Minus Query: 508 aggagagtgatatcaagtgggcatctcgctgg----gatagttatctgctgatgacagat 563 |||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||| Sbjct: 10616955 aggagagtgatatcaagtgggcatctcgctggctgggatacctatctactgatgacggat 10616896 Query: 564 gatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcctttc 619 || |||||||| ||||| |||||||| ||||| |||||||| | ||||||||||| Sbjct: 10616895 gaccaaatccactggttttccattgtgaattccctcatgattatcctcttcctttc 10616840 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggat 542 |||| ||||||||||||||||| |||||||||||| Sbjct: 27788641 aggaaagtgatatcaagtgggcttctcgctgggat 27788675 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| |||||||||| |||| || | ||| ||||| ||||||||||||||||||||| Sbjct: 27787789 gttggagaaaaagaagcgaaggagctgacggagaagatggaagatgagtaccgtgtgaac 27787848 Query: 135 atg 137 ||| Sbjct: 27787849 atg 27787851 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 27784652 aaggaaaagatagaggatgagtaccgggtgaacatg 27784687 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 27765298 aaggaaaagatagaggatgagtaccgggtgaacatg 27765333 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 27756359 aaggaaaagatagaggatgagtaccgggtgaacatg 27756394
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 151 bits (76), Expect = 3e-33 Identities = 121/136 (88%) Strand = Plus / Minus Query: 375 ggacagtggaatgacaagaagactcatctgaccacttgcgatccgcatgcgaaacgtata 434 ||||||||||||||||||||||| | ||||||||||| ||||| ||||| |||| |||| Sbjct: 44872 ggacagtggaatgacaagaagacccgcctgaccacttgtgatcctcatgcaaaacatata 44813 Query: 435 attacatcctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatac 494 |||||||| ||||||||||| |||||||||||||||||||||||||| | || || || Sbjct: 44812 attacatcatctgattctccccaggaggttgaagttggcaaagacataatatttacttat 44753 Query: 495 gatgtggatttcaagg 510 |||||||||||||||| Sbjct: 44752 gatgtggatttcaagg 44737 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 132 aacatgattcttgacaatctacctctagttgttcctattcaaagagtggatcaagaaggt 191 ||||||||||||||||| |||||||||||||||| ||| ||||| |||| ||||||||| Sbjct: 45317 aacatgattcttgacaacttacctctagttgttccaattaaaagaatggaccaagaaggt 45258 Query: 192 gcttatttctatcaacatgggttccatgttggagccaaaggacaata 238 || ||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 45257 gcatatttctatcagcatgtcttccatgttggagccaaaggacaata 45211 Score = 129 bits (65), Expect = 1e-26 Identities = 102/113 (90%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 26 gtttgaaatgagggtacctcagatg-tgtcaaatagtctgcaagatttcagttggggaaa 84 |||||||||||| | ||||| ||| ||||||||||||||||||||||| || ||||| | Sbjct: 45506 gtttgaaatgagagagcctcaaatgctgtcaaatagtctgcaagatttctgtcggggaga 45447 Query: 85 aagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 45446 aagaagcaaagattctcaaggaaaagattgaagatgagtaccgtgtgaacatg 45394 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Minus Query: 249 aaggatgaaaagtacttcatccacaatcatttgtcctttacggtgaaatatcacagggat 308 |||||||||||| |||||| ||||| ||||| || ||||| ||||| |||||||||||| Sbjct: 45107 aaggatgaaaagagcttcattcacaaccatttatcatttactgtgaagtatcacagggat 45048 Query: 309 gcacagagggatgtttctaggatagtggcctttgaagtaaaaccctacagt 359 || || |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 45047 gcccaaagggatgtttctaggatagttgcatttgaagtgaaaccatacagt 44997 Score = 101 bits (51), Expect = 3e-18 Identities = 100/116 (86%), Gaps = 4/116 (3%) Strand = Plus / Minus Query: 508 aggagagtgatatcaagtgggcatctcgctgg----gatagttatctgctgatgacagat 563 |||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||| Sbjct: 44595 aggagagtgatatcaagtgggcatctcgctggctgggatacctatctactgatgacggat 44536 Query: 564 gatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcctttc 619 || |||||||| ||||| |||||||| ||||| |||||||| | ||||||||||| Sbjct: 44535 gaccaaatccactggttttccattgtgaattccctcatgattatcctcttcctttc 44480
>ref|XM_507328.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1125_C01.28 mRNA Length = 2304 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 451 ctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggatttcaagg 510 ||||||| |||||||||| ||| || || || | |||||||| ||||| | || ||| Sbjct: 782 ctcctcaagaggttgaagctggaaaggatatcatattcacatatgatgttggctttgagg 841 Query: 511 agagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaa 570 | ||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| Sbjct: 842 aaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatcaaa 901 Query: 571 tccattggttctccattgtaaattctctcatgatcgt 607 | || |||||||| ||||| || |||||||||||||| Sbjct: 902 ttcactggttctctattgtgaactctctcatgatcgt 938 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagtt 161 ||||||||||| || ||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 433 aaggaaaagatagaggatgagtaccgggtgaacatgattcttgacaacctcccgctagtt 492 Query: 162 gttcctatt 170 || |||||| Sbjct: 493 gtgcctatt 501 Score = 48.1 bits (24), Expect = 0.035 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||| ||||| ||||||||||| ||||| | || |||||||||| || Sbjct: 331 gatcgcattgagaattctccttatgtgtttgagatgagagagcccaagatgtgtcagatc 390 Query: 60 gtctgcaa 67 |||||||| Sbjct: 391 gtctgcaa 398
>ref|XM_483721.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 451 ctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggatttcaagg 510 ||||||| |||||||||| ||| || || || | |||||||| ||||| | || ||| Sbjct: 785 ctcctcaagaggttgaagctggaaaggatatcatattcacatatgatgttggctttgagg 844 Query: 511 agagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaa 570 | ||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| Sbjct: 845 aaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatcaaa 904 Query: 571 tccattggttctccattgtaaattctctcatgatcgt 607 | || |||||||| ||||| || |||||||||||||| Sbjct: 905 ttcactggttctctattgtgaactctctcatgatcgt 941 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagtt 161 ||||||||||| || ||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 436 aaggaaaagatagaggatgagtaccgggtgaacatgattcttgacaacctcccgctagtt 495 Query: 162 gttcctatt 170 || |||||| Sbjct: 496 gtgcctatt 504 Score = 48.1 bits (24), Expect = 0.035 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||| ||||| ||||||||||| ||||| | || |||||||||| || Sbjct: 334 gatcgcattgagaattctccttatgtgtttgagatgagagagcccaagatgtgtcagatc 393 Query: 60 gtctgcaa 67 |||||||| Sbjct: 394 gtctgcaa 401
>dbj|AK121320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114C04, full insert sequence Length = 2409 Score = 113 bits (57), Expect = 7e-22 Identities = 139/165 (84%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||||||||| ||||||||| ||||||| | || ||||||| || || Sbjct: 368 gatcgcattgagaactctccatatgtgtttcaaatgagagagcccaagatgtgccagatt 427 Query: 60 gtctgcaagatttcagttggggaaaaagaaggaaagggtctcaaggaaaagattgaagat 119 |||||||| | | ||||| || ||||||| ||||| |||||||||||||| || ||| Sbjct: 428 gtctgcaaattaactgttggtgagaaagaagcaaaggagctcaaggaaaagatagaggat 487 Query: 120 gagtaccgtgtgaacatgattcttgacaatctacctctagttgtt 164 || || |||||||||||||||||||||||||| || ||||||||| Sbjct: 488 gaatatcgtgtgaacatgattcttgacaatctcccgctagttgtt 532 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 444 tctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggat 503 ||||| |||||||||||||| |||| ||||||||| || | ||||| || ||||| | Sbjct: 809 tctgactctcctcaggaggtcgaagctggcaaagaaatcatattcacctatgatgttcac 868 Query: 504 ttcaaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagat 563 || |||||||||| ||||||||||| || || ||||| | |||||| ||||||| ||| Sbjct: 869 tttgaggagagtgacatcaagtgggcttcccgttgggacacctatctgttgatgactgat 928 Query: 564 gatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 ||||| || || ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 929 gatcagattcactggttttctattgtcaactctctcatgatcgtgcttttcct 981
>dbj|AK099230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O15, full insert sequence Length = 2211 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 451 ctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggatttcaagg 510 ||||||| |||||||||| ||| || || || | |||||||| ||||| | || ||| Sbjct: 785 ctcctcaagaggttgaagctggaaaggatatcatattcacatatgatgttggctttgagg 844 Query: 511 agagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaa 570 | ||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| Sbjct: 845 aaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatcaaa 904 Query: 571 tccattggttctccattgtaaattctctcatgatcgt 607 | || |||||||| ||||| || |||||||||||||| Sbjct: 905 ttcactggttctctattgtgaactctctcatgatcgt 941 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagtt 161 ||||||||||| || ||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 436 aaggaaaagatagaggatgagtaccgggtgaacatgattcttgacaacctcccgctagtt 495 Query: 162 gttcctatt 170 || |||||| Sbjct: 496 gtgcctatt 504 Score = 48.1 bits (24), Expect = 0.035 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||| ||||| ||||||||||| ||||| | || |||||||||| || Sbjct: 334 gatcgcattgagaattctccttatgtgtttgagatgagagagcccaagatgtgtcagatc 393 Query: 60 gtctgcaa 67 |||||||| Sbjct: 394 gtctgcaa 401
>dbj|AK072840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141D24, full insert sequence Length = 2306 Score = 113 bits (57), Expect = 7e-22 Identities = 132/157 (84%) Strand = Plus / Plus Query: 451 ctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggatttcaagg 510 ||||||| |||||||||| ||| || || || | |||||||| ||||| | || ||| Sbjct: 782 ctcctcaagaggttgaagctggaaaggatatcatattcacatatgatgttggctttgagg 841 Query: 511 agagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaa 570 | ||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||| Sbjct: 842 aaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatcaaa 901 Query: 571 tccattggttctccattgtaaattctctcatgatcgt 607 | || |||||||| ||||| || |||||||||||||| Sbjct: 902 ttcactggttctctattgtgaactctctcatgatcgt 938 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagtt 161 ||||||||||| || ||||||||||| |||||||||||||||||||| || || |||||| Sbjct: 433 aaggaaaagatagaggatgagtaccgggtgaacatgattcttgacaacctcccgctagtt 492 Query: 162 gttcctatt 170 || |||||| Sbjct: 493 gtgcctatt 501 Score = 48.1 bits (24), Expect = 0.035 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||| ||||| ||||||||||| ||||| | || |||||||||| || Sbjct: 331 gatcgcattgagaattctccttatgtgtttgagatgagagagcccaagatgtgtcagatc 390 Query: 60 gtctgcaa 67 |||||||| Sbjct: 391 gtctgcaa 398
>dbj|AK071848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121L02, full insert sequence Length = 1521 Score = 113 bits (57), Expect = 7e-22 Identities = 139/165 (84%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgtcaaata 59 |||||||||||||||||||| ||||||||| ||||||| | || ||||||| || || Sbjct: 370 gatcgcattgagaactctccatatgtgtttcaaatgagagagcccaagatgtgccagatt 429 Query: 60 gtctgcaagatttcagttggggaaaaagaaggaaagggtctcaaggaaaagattgaagat 119 |||||||| | | ||||| || ||||||| ||||| |||||||||||||| || ||| Sbjct: 430 gtctgcaaattaactgttggtgagaaagaagcaaaggagctcaaggaaaagatagaggat 489 Query: 120 gagtaccgtgtgaacatgattcttgacaatctacctctagttgtt 164 || || |||||||||||||||||||||||||| || ||||||||| Sbjct: 490 gaatatcgtgtgaacatgattcttgacaatctcccgctagttgtt 534 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 444 tctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtggat 503 ||||| |||||||||||||| |||| ||||||||| || | ||||| || ||||| | Sbjct: 811 tctgactctcctcaggaggtcgaagctggcaaagaaatcatattcacctatgatgttcac 870 Query: 504 ttcaaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagat 563 || |||||||||| ||||||||||| || || ||||| | |||||| ||||||| ||| Sbjct: 871 tttgaggagagtgacatcaagtgggcttcccgttgggacacctatctgttgatgactgat 930 Query: 564 gatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 ||||| || || ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 931 gatcagattcactggttttctattgtcaactctctcatgatcgtgcttttcct 983
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01 Length = 123849 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 118370 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 118429 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 118430 aaattcactggttctctattgtgaactctctcatgatcgt 118469 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 99012 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 99071 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 99072 aaattcactggttctctattgtgaactctctcatgatcgt 99111 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 90078 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 90137 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 90138 aaattcactggttctctattgtgaactctctcatgatcgt 90177 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggat 542 |||| ||||||||||||||||| |||||||||||| Sbjct: 121563 aggaaagtgatatcaagtgggcttctcgctgggat 121597 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| |||||||||| |||| || | ||| ||||| ||||||||||||||||||||| Sbjct: 120711 gttggagaaaaagaagcgaaggagctgacggagaagatggaagatgagtaccgtgtgaac 120770 Query: 135 atg 137 ||| Sbjct: 120771 atg 120773 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 117574 aaggaaaagatagaggatgagtaccgggtgaacatg 117609 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 98220 aaggaaaagatagaggatgagtaccgggtgaacatg 98255 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 89281 aaggaaaagatagaggatgagtaccgggtgaacatg 89316
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 39905 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 39964 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 39965 aaattcactggttctctattgtgaactctctcatgatcgt 40004 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 20547 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 20606 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 20607 aaattcactggttctctattgtgaactctctcatgatcgt 20646 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 11613 aggaaagtgatatcaagtgggcttctcgctgggacacctatctgcttatgacagatgatc 11672 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 |||| || |||||||| ||||| || |||||||||||||| Sbjct: 11673 aaattcactggttctctattgtgaactctctcatgatcgt 11712 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggat 542 |||| ||||||||||||||||| |||||||||||| Sbjct: 43098 aggaaagtgatatcaagtgggcttctcgctgggat 43132 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| |||||||||| |||| || | ||| ||||| ||||||||||||||||||||| Sbjct: 42246 gttggagaaaaagaagcgaaggagctgacggagaagatggaagatgagtaccgtgtgaac 42305 Query: 135 atg 137 ||| Sbjct: 42306 atg 42308 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 39109 aaggaaaagatagaggatgagtaccgggtgaacatg 39144 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 19755 aaggaaaagatagaggatgagtaccgggtgaacatg 19790 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatg 137 ||||||||||| || ||||||||||| ||||||||| Sbjct: 10816 aaggaaaagatagaggatgagtaccgggtgaacatg 10851
>ref|NM_121122.2| Arabidopsis thaliana transporter AT5G10840 mRNA, complete cds Length = 1984 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/133 (82%) Strand = Plus / Plus Query: 484 tcttcacatacgatgtggatttcaaggagagtgatatcaagtgggcatctcgctgggata 543 |||||||||| || || |||||| |||| ||||| | |||||||||||| | ||||||| Sbjct: 801 tcttcacatatgacgtcgatttccaggaaagtgaagtgaagtgggcatctagatgggata 860 Query: 544 gttatctgctgatgacagatgatcaaatccattggttctccattgtaaattctctcatga 603 |||||| ||||||| ||| | |||||||| |||||||| || || |||||||| |||| Sbjct: 861 cttatcttctgatgagtgataaccaaatccactggttctctatcgtcaattctctgatga 920 Query: 604 tcgttctcttcct 616 |||| || ||||| Sbjct: 921 tcgtcctattcct 933 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 105 gaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagttgtt 164 |||||||| || ||||||||||| || |||||||| || ||||| || ||||| |||||| Sbjct: 419 gaaaagatcgatgatgagtaccgggtcaacatgatcctcgacaaccttcctctggttgtt 478 Query: 165 cctattcaaagagt 178 || ||| ||||||| Sbjct: 479 ccaattgaaagagt 492
>gb|BT013512.1| Lycopersicon esculentum clone 132227F, mRNA sequence Length = 2358 Score = 77.8 bits (39), Expect = 4e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 403 tgaccacttgcgatccgcatgcgaaacgtataattacatcctctgattctcctcaggagg 462 |||||||||| ||||| ||||| ||||||| ||||| ||||||||||| || |||| Sbjct: 794 tgaccacttgtgatccccatgccaaacgtactgttacaagttctgattctccccaagagg 853 Query: 463 ttgaagttggcaaagacattgtcttcacatacgatgtggatttcaaggagagtgatatca 522 |||||| | || || || |||||||||| ||||| || || |||| |||||||||| Sbjct: 854 ttgaagataagaaggaaatcatcttcacatatgatgttgaatttgaggaaagtgatatca 913 Query: 523 agtgggcatctcgctgggatagttatctgctgatgacagatgatcaaatccattggttct 582 |||||||||| | ||||||| |||||| ||||| | |||||||| ||||| ||||| | Sbjct: 914 agtgggcatcaagatgggatacttatcttttgatggctgatgatcagatccactggtttt 973 Query: 583 ccattgt 589 | ||||| Sbjct: 974 caattgt 980 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 108 aagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctct 157 ||||||||||||||||| || || |||||||| | |||||||| ||||| Sbjct: 502 aagattgaagatgagtatcgggtcaacatgatcttggacaatcttcctct 551
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||||||||| ||||||||||| || || ||||| | |||||| ||||||| ||||||| Sbjct: 74908 aggagagtgacatcaagtgggcttcccgttgggacacctatctgttgatgactgatgatc 74967 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 | || || ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 74968 agattcactggttttctattgtcaactctctcatgatcgtgcttttcct 75016 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| || ||||||| ||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 74103 gttggtgagaaagaagcaaaggagctcaaggaaaagatagaggatgaatatcgtgtgaac 74162 Query: 135 atg 137 ||| Sbjct: 74163 atg 74165 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 444 tctgattctcctcaggaggttgaagttggcaaaga 478 ||||| |||||||||||||| |||| ||||||||| Sbjct: 74726 tctgactctcctcaggaggtcgaagctggcaaaga 74760 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 gattcttgacaatctacctctagttgtt 164 ||||||||||||||| || ||||||||| Sbjct: 74236 gattcttgacaatctcccgctagttgtt 74263 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc 20 |||||||||||||||||||| Sbjct: 73934 gatcgcattgagaactctcc 73953
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||||||||| ||||||||||| || || ||||| | |||||| ||||||| ||||||| Sbjct: 21869474 aggagagtgacatcaagtgggcttcccgttgggacacctatctgttgatgactgatgatc 21869533 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 | || || ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 21869534 agattcactggttttctattgtcaactctctcatgatcgtgcttttcct 21869582 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| || ||||||| ||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 21868669 gttggtgagaaagaagcaaaggagctcaaggaaaagatagaggatgaatatcgtgtgaac 21868728 Query: 135 atg 137 ||| Sbjct: 21868729 atg 21868731 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 444 tctgattctcctcaggaggttgaagttggcaaaga 478 ||||| |||||||||||||| |||| ||||||||| Sbjct: 21869292 tctgactctcctcaggaggtcgaagctggcaaaga 21869326 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 gattcttgacaatctacctctagttgtt 164 ||||||||||||||| || ||||||||| Sbjct: 21868802 gattcttgacaatctcccgctagttgtt 21868829 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc 20 |||||||||||||||||||| Sbjct: 21868500 gatcgcattgagaactctcc 21868519
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||||||||| ||||||||||| || || ||||| | |||||| ||||||| ||||||| Sbjct: 191 aggagagtgacatcaagtgggcttcccgttgggacacctatctgttgatgactgatgatc 250 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 | || || ||||| || ||||| || |||||||||||||| || ||||| Sbjct: 251 agattcactggttttctattgtcaactctctcatgatcgtgcttttcct 299 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 444 tctgattctcctcaggaggttgaagttggcaaaga 478 ||||| |||||||||||||| |||| ||||||||| Sbjct: 9 tctgactctcctcaggaggtcgaagctggcaaaga 43
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 ||||||| |||||||| ||||| || || ||||| || || ||||||||||| ||||||| Sbjct: 26249800 aggagagcgatatcaaatgggcgtcgcggtgggacagctacctgctgatgacggatgatc 26249859 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 | ||||| ||||||||||| || || || || |||||||| Sbjct: 26249860 agatccactggttctccatcgtgaactcgctgatgatcgt 26249899 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 100 tcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||| ||||||||||| |||||||| || ||||||||| Sbjct: 21609877 tcaaagaaaagattgacgatgagtatcgagtgaacatg 21609840
>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0453H04 Length = 175047 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 ||||||| |||||||| ||||| || || ||||| || || ||||||||||| ||||||| Sbjct: 114340 aggagagcgatatcaaatgggcgtcgcggtgggacagctacctgctgatgacggatgatc 114399 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 | ||||| ||||||||||| || || || || |||||||| Sbjct: 114400 agatccactggttctccatcgtgaactcgctgatgatcgt 114439
>dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A19, full insert sequence Length = 2291 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 ||||||| |||||||| ||||| || || ||||| || || ||||||||||| ||||||| Sbjct: 865 aggagagcgatatcaaatgggcgtcgcggtgggacagctacctgctgatgacggatgatc 924 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgt 607 | ||||| ||||||||||| || || || || |||||||| Sbjct: 925 agatccactggttctccatcgtgaactcgctgatgatcgt 964
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 522 aagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaatccattggttc 581 |||||||||||| | ||||||| |||||| ||||||| ||| | |||||||| |||||| Sbjct: 33683 aagtgggcatctagatgggatacttatcttctgatgagtgataaccaaatccactggttc 33624 Query: 582 tccattgtaaattctctcatgatcgttctcttcct 616 || || || |||||||| |||||||| || ||||| Sbjct: 33623 tctatcgtcaattctctgatgatcgtcctattcct 33589
>ref|NM_127978.2| Arabidopsis thaliana transporter AT2G24170 mRNA, complete cds Length = 2169 Score = 67.9 bits (34), Expect = 4e-08 Identities = 139/174 (79%) Strand = Plus / Plus Query: 443 ctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtgga 502 |||||| ||||||||||||||||||| || || || ||| |||||||||| ||||| || Sbjct: 782 ctctgagtctcctcaggaggttgaagaagggaacgagattatcttcacatatgatgttga 841 Query: 503 tttcaaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacaga 562 ||| |||| ||||| | || ||||| ||| | ||||| | ||| || || ||| | || Sbjct: 842 cttccaggaaagtgaggtgaaatgggcgtctaggtgggacacttaccttctaatggctga 901 Query: 563 tgatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 |||||| || ||||||||||| || || |||||| | ||||| ||||| ||||| Sbjct: 902 tgatcagattcattggttctcaatcgttaattctatgatgattgttcttttcct 955 Score = 44.1 bits (22), Expect = 0.54 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactctcc-tatgtgtttgaaatgagggtacctcagatgtgt 53 ||||| |||||||||||||| | ||||||| ||||||||| | | ||||||||| Sbjct: 339 gatcgaattgagaactctccttttgtgtttaaaatgagggaatcgcagatgtgt 392
>gb|AY091067.1| Arabidopsis thaliana putative multispanning membrane protein (At2g24170) mRNA, complete cds Length = 2138 Score = 67.9 bits (34), Expect = 4e-08 Identities = 139/174 (79%) Strand = Plus / Plus Query: 443 ctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtgga 502 |||||| ||||||||||||||||||| || || || ||| |||||||||| ||||| || Sbjct: 782 ctctgagtctcctcaggaggttgaagaagggaacgagattatcttcacatatgatgttga 841 Query: 503 tttcaaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacaga 562 ||| |||| ||||| | || ||||| ||| | ||||| | ||| || || ||| | || Sbjct: 842 cttccaggaaagtgaggtgaaatgggcgtctaggtgggacacttaccttctaatggctga 901 Query: 563 tgatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 |||||| || ||||||||||| || || |||||| | ||||| ||||| ||||| Sbjct: 902 tgatcagattcattggttctcaatcgttaattctatgatgattgttcttttcct 955 Score = 44.1 bits (22), Expect = 0.54 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 1 gatcgcattgagaactct-cctatgtgtttgaaatgagggtacctcagatgtgt 53 ||||| |||||||||||| ||| ||||||| ||||||||| | | ||||||||| Sbjct: 339 gatcgaattgagaactctccctttgtgtttaaaatgagggaatcgcagatgtgt 392
>gb|AC005967.3| Arabidopsis thaliana chromosome 2 clone F27D4 map CIC06C07, complete sequence Length = 96046 Score = 67.9 bits (34), Expect = 4e-08 Identities = 139/174 (79%) Strand = Plus / Minus Query: 443 ctctgattctcctcaggaggttgaagttggcaaagacattgtcttcacatacgatgtgga 502 |||||| ||||||||||||||||||| || || || ||| |||||||||| ||||| || Sbjct: 34496 ctctgagtctcctcaggaggttgaagaagggaacgagattatcttcacatatgatgttga 34437 Query: 503 tttcaaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacaga 562 ||| |||| ||||| | || ||||| ||| | ||||| | ||| || || ||| | || Sbjct: 34436 cttccaggaaagtgaggtgaaatgggcgtctaggtgggacacttaccttctaatggctga 34377 Query: 563 tgatcaaatccattggttctccattgtaaattctctcatgatcgttctcttcct 616 |||||| || ||||||||||| || || |||||| | ||||| ||||| ||||| Sbjct: 34376 tgatcagattcattggttctcaatcgttaattctatgatgattgttcttttcct 34323
>ref|XM_483727.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1851 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 75 gttggggaaaaagaaggaaagggtctcaaggaaaagattgaagatgagtaccgtgtgaac 134 ||||| |||||||||| |||| || | ||| ||||| ||||||||||||||||||||| Sbjct: 319 gttggagaaaaagaagcgaaggagctgacggagaagatggaagatgagtaccgtgtgaac 378 Query: 135 atgattcttgacaa 148 ||| ||||||||| Sbjct: 379 atggctcttgacaa 392 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggat 542 |||| ||||||||||||||||| |||||||||||| Sbjct: 752 aggaaagtgatatcaagtgggcttctcgctgggat 786
>ref|NM_112228.1| Arabidopsis thaliana transporter AT3G13772 mRNA, complete cds Length = 2105 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 507 aaggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgat 566 ||||||||||| ||||| ||||| ||||| ||||| | || || || |||| |||||| Sbjct: 766 aaggagagtgaaatcaaatgggcttctcggtgggacacgtaccttctcatgaacgatgat 825 Query: 567 caaatccattggttctccattgtaaattctctcatgatcgttctcttcctttc 619 |||||||| ||||| ||||| ||||||| || ||||| || || |||||||| Sbjct: 826 caaatccactggttttccatcataaattcacttatgattgtccttttcctttc 878 Score = 40.1 bits (20), Expect = 8.4 Identities = 44/52 (84%) Strand = Plus / Plus Query: 100 tcaaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatct 151 |||||||||||||||| ||||| ||| | | || ||||||||||| ||||| Sbjct: 359 tcaaggaaaagattgatgatgaatacagggctaatatgattcttgataatct 410
>ref|XM_534381.2| PREDICTED: Canis familiaris similar to Transmembrane 9 superfamily protein member 4 (LOC477191), mRNA Length = 2132 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctg 551 |||| ||||| ||||| ||||||||||||||||||| ||||||| Sbjct: 770 aggaaagtgacatcaaatgggcatctcgctgggatacttatctg 813
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 |||||||||| ||||| ||||| ||||| ||||| | || || || |||| ||||||| Sbjct: 67724 aggagagtgaaatcaaatgggcttctcggtgggacacgtaccttctcatgaacgatgatc 67665 Query: 568 aaatccattggttctccattgtaaattctctcatgatcgttctcttcctttc 619 ||||||| ||||| ||||| ||||||| || ||||| || || |||||||| Sbjct: 67664 aaatccactggttttccatcataaattcacttatgattgtccttttcctttc 67613
>gb|BT024118.1| Zea mays clone EL01N0506E07 mRNA sequence Length = 1893 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 518 tatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatcaaatccattg 577 |||||||||||| || |||||||| | || || |||||| |||| || ||||||||||| Sbjct: 456 tatcaagtgggcgtcacgctgggacacctaccttctgatggcagacgaccaaatccattg 515 Query: 578 gttctccattgtaaattctctcatgat 604 ||| || ||||| ||||| || ||||| Sbjct: 516 gttttctattgtcaattcactgatgat 542 Score = 40.1 bits (20), Expect = 8.4 Identities = 71/88 (80%) Strand = Plus / Plus Query: 102 aaggaaaagattgaagatgagtaccgtgtgaacatgattcttgacaatctacctctagtt 161 ||||| || ||||| ||||||||||| | |||||||| |||||||| || ||| | || Sbjct: 40 aaggagaaaattgaggatgagtaccgcataaacatgatccttgacaaccttcctttggtc 99 Query: 162 gttcctattcaaagagtggatcaagaag 189 || || ||| | ||| |||||||||||| Sbjct: 100 gtcccaattaagagattggatcaagaag 127
>ref|NM_104386.2| Arabidopsis thaliana transporter AT1G55130 mRNA, complete cds Length = 2041 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 474 aaagacattgtcttcacatacgatgtggatttcaaggagagtgatatcaagtgggcatct 533 ||||| ||||| || ||||| ||||| | || |||||||||| |||||| ||||| || Sbjct: 721 aaagaaattgtgtttacatatgatgtcgcctttaaggagagtgttatcaaatgggcttcg 780 Query: 534 cgctgggatagttatctgctgatgacagatgatcaaatccattggtt 580 |||||||| | || |||| |||| |||||||||||||| ||||| Sbjct: 781 cgctgggacacatacttgcttatgaacgatgatcaaatccactggtt 827
>gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, complete sequence Length = 200918 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 299 tcacagggatgcacagagggatg 321 ||||||||||||||||||||||| Sbjct: 122560 tcacagggatgcacagagggatg 122538
>gb|AC125522.4| Mus musculus BAC clone RP24-363I16 from 1, complete sequence Length = 100480 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctc 534 ||||||||||||| ||||||||||||| Sbjct: 71502 aggagagtgatatgaagtgggcatctc 71528
>gb|AC147129.3| Mus musculus BAC clone RP24-531L5 from 1, complete sequence Length = 147476 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 aggagagtgatatcaagtgggcatctc 534 ||||||||||||| ||||||||||||| Sbjct: 101217 aggagagtgatatgaagtgggcatctc 101191
>ref|XM_514572.1| PREDICTED: Pan troglodytes similar to Transmembrane 9 superfamily protein member 4 (LOC458164), mRNA Length = 2691 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 824 aggaaagtgatatcaaatgggcctctcgctggga 857
>ref|XM_613005.2| PREDICTED: Bos taurus similar to Transmembrane 9 superfamily protein member 4 (LOC533562), mRNA Length = 3134 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||| ||||||||||| ||||||||||| Sbjct: 668 aggaaagtgacatcaagtgggcctctcgctggga 701
>gb|BC022850.2| Homo sapiens transmembrane 9 superfamily protein member 4, mRNA (cDNA clone MGC:16564 IMAGE:4098679), complete cds Length = 3752 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 763 aggaaagtgatatcaaatgggcctctcgctggga 796
>ref|NM_014742.2| Homo sapiens transmembrane 9 superfamily protein member 4 (TM9SF4), mRNA Length = 3752 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 763 aggaaagtgatatcaaatgggcctctcgctggga 796
>emb|CT030530.1| Xenopus tropicalis finished cDNA, clone TNeu020p16 Length = 2708 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 ||||||||||||| |||||||| || |||||||| Sbjct: 770 aggagagtgatattaagtgggcctcgcgctggga 803
>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21 Contains the 3' end of the HCK for hemopoietic cell kinase, the gene for novel protein (KIAA0255), the RPL24P1 gene for ribosomal protein L24 pseudogene 1 and two CpG Islands, complete sequence Length = 111694 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 69870 aggaaagtgatatcaaatgggcctctcgctggga 69903
>gb|BC021107.1| Homo sapiens transmembrane 9 superfamily protein member 4, mRNA (cDNA clone MGC:31858 IMAGE:4896167), complete cds Length = 2068 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 781 aggaaagtgatatcaaatgggcctctcgctggga 814
>dbj|AK126534.1| Homo sapiens cDNA FLJ44570 fis, clone UTERU3011063, highly similar to Transmembrane 9 superfamily protein member 4 Length = 3428 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 455 aggaaagtgatatcaaatgggcctctcgctggga 488
>emb|CR611710.1| full-length cDNA clone CS0DC015YK21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1607 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 458 aggaaagtgatatcaaatgggcctctcgctggga 491
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 100 tcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||| ||||||||||| |||||||| || ||||||||| Sbjct: 167061 tcaaagaaaagattgacgatgagtatcgagtgaacatg 167024
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Minus Query: 100 tcaaggaaaagattgaagatgagtaccgtgtgaacatg 137 |||| ||||||||||| |||||||| || ||||||||| Sbjct: 8808 tcaaagaaaagattgacgatgagtatcgagtgaacatg 8771
>dbj|D87444.1| Homo sapiens mRNA for KIAA0255 gene, partial cds Length = 4028 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 1059 aggaaagtgatatcaaatgggcctctcgctggga 1092
>emb|CR855301.19| Zebrafish DNA sequence from clone CH211-193K8 in linkage group 17, complete sequence Length = 149563 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 aagatttcagttggggaaaaag 87 |||||||||||||||||||||| Sbjct: 7316 aagatttcagttggggaaaaag 7337
>gb|BC005173.2| Homo sapiens cDNA clone IMAGE:3507918, containing frame-shift errors Length = 3775 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctggga 541 |||| ||||||||||| ||||| ||||||||||| Sbjct: 758 aggaaagtgatatcaaatgggcctctcgctggga 791
>gb|AC145586.4| Mus musculus BAC clone RP24-167J1 from chromosome Y, complete sequence Length = 158469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 151191 acagtggaatgacaagaagac 151211
>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence Length = 223801 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 9931 acagtggaatgacaagaagac 9911
>gb|AC140371.3| Mus musculus BAC clone RP24-220G21 from chromosome Y, complete sequence Length = 190597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 25276 acagtggaatgacaagaagac 25256
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 241216 acagtggaatgacaagaagac 241236
>gb|AC140925.4| Mus musculus BAC clone RP24-140B17 from chromosome Y, complete sequence Length = 172606 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 74124 acagtggaatgacaagaagac 74104
>gb|AC145605.3| Mus musculus BAC clone RP24-246N9 from chromosome Y, complete sequence Length = 147478 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 28822 acagtggaatgacaagaagac 28842
>gb|AC147163.2| Mus musculus BAC clone RP24-317B17 from chromosome Y, complete sequence Length = 208700 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 194431 acagtggaatgacaagaagac 194411 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 23788 acagtggaatgacaagaagac 23808
>gb|AC144579.2| Mus musculus BAC clone RP24-375M15 from chromosome Y, complete sequence Length = 162972 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 54 acagtggaatgacaagaagac 34
>gb|AC183431.1| Mus musculus BAC clone RP24-128G23 from chromosome y, complete sequence Length = 158633 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 115178 acagtggaatgacaagaagac 115158
>gb|AC175494.3| Mus musculus BAC clone RP24-75G20 from chromosome y, complete sequence Length = 229858 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 183497 acagtggaatgacaagaagac 183477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 16896 acagtggaatgacaagaagac 16916
>gb|AC147126.2| Mus musculus BAC clone RP24-561J22 from chromosome Y, complete sequence Length = 141049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 38016 acagtggaatgacaagaagac 37996
>gb|AC140435.3| Mus musculus BAC clone RP24-172H21 from chromosome Y, complete sequence Length = 191085 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 33478 acagtggaatgacaagaagac 33498
>gb|AC145593.3| Mus musculus BAC clone RP24-186P6 from chromosome Y, complete sequence Length = 162710 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 134387 acagtggaatgacaagaagac 134367
>gb|AC142451.4| Mus musculus BAC clone RP24-443M4 from chromosome Y, complete sequence Length = 138426 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 82444 acagtggaatgacaagaagac 82464
>gb|AC142412.3| Mus musculus BAC clone RP24-75E18 from chromosome Y, complete sequence Length = 175697 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 165304 acagtggaatgacaagaagac 165324
>gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome Y, complete sequence Length = 208378 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 48000 acagtggaatgacaagaagac 48020
>gb|AC130834.4| Mus musculus BAC clone RP24-119M1 from chromosome Y, complete sequence Length = 189883 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 123674 acagtggaatgacaagaagac 123654
>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence Length = 199089 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 181884 acagtggaatgacaagaagac 181864
>gb|AC132341.4| Mus musculus BAC clone RP24-168C11 from chromosome Y, complete sequence Length = 142720 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 72491 acagtggaatgacaagaagac 72471
>gb|AC140427.3| Mus musculus BAC clone RP24-173G7 from chromosome Y, complete sequence Length = 182766 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 125928 acagtggaatgacaagaagac 125948
>gb|AC144855.3| Mus musculus BAC clone RP24-179H2 from chromosome Y, complete sequence Length = 152731 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 59198 acagtggaatgacaagaagac 59178
>gb|AC139196.4| Mus musculus BAC clone RP24-189L24 from chromosome Y, complete sequence Length = 143221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 119111 acagtggaatgacaagaagac 119091
>gb|AC145596.3| Mus musculus BAC clone RP24-211L15 from chromosome Y, complete sequence Length = 155644 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 28280 acagtggaatgacaagaagac 28300
>gb|AC147159.2| Mus musculus BAC clone RP24-259B7 from chromosome Y, complete sequence Length = 150659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 2373 acagtggaatgacaagaagac 2353
>gb|AC141877.3| Mus musculus BAC clone RP24-280M5 from chromosome Y, complete sequence Length = 143283 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 40342 acagtggaatgacaagaagac 40362
>gb|AC145564.4| Mus musculus BAC clone RP24-482K19 from chromosome Y, complete sequence Length = 188188 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 121758 acagtggaatgacaagaagac 121778
>gb|AC132263.3| Mus musculus BAC clone RP24-371G24 from chromosome Y, complete sequence Length = 136102 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 34834 acagtggaatgacaagaagac 34854
>gb|AC144409.3| Mus musculus BAC clone RP24-302I24 from chromosome Y, complete sequence Length = 148555 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 14171 acagtggaatgacaagaagac 14151
>gb|AC141470.4| Mus musculus BAC clone RP24-566E24 from chromosome Y, complete sequence Length = 197634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 149681 acagtggaatgacaagaagac 149701
>gb|AC132285.4| Mus musculus BAC clone RP24-354N13 from chromosome Y, complete sequence Length = 166915 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 110683 acagtggaatgacaagaagac 110703
>ref|XM_755666.1| Ustilago maydis 521 hypothetical protein (UM04612.1) partial mRNA Length = 1953 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 gtctcaaggaaaagattgaag 117 ||||||||||||||||||||| Sbjct: 557 gtctcaaggaaaagattgaag 577
>gb|AC142409.4| Mus musculus BAC clone RP24-185L20 from chromosome y, complete sequence Length = 150886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 149880 acagtggaatgacaagaagac 149900
>gb|AC174232.4| Mus musculus BAC clone RP24-66G1 from chromosome y, complete sequence Length = 196032 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 63841 acagtggaatgacaagaagac 63861
>gb|AC184105.1| Mus musculus chromosome UNK clone CH35-62A13, complete sequence Length = 168299 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 83410 acagtggaatgacaagaagac 83430 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 47941 acagtggaatgacaagaagac 47961
>gb|AC184104.1| Mus musculus chromosome UNK clone CH33-226F23, complete sequence Length = 191521 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 104210 acagtggaatgacaagaagac 104190
>gb|AC132294.4| Mus musculus BAC clone RP24-324F17 from chromosome y, complete sequence Length = 174347 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 153205 acagtggaatgacaagaagac 153185
>gb|AC105923.6| Homo sapiens BAC clone RP11-641A24 from 4, complete sequence Length = 154354 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ttcaaagagtggatcaagaag 189 ||||||||||||||||||||| Sbjct: 121432 ttcaaagagtggatcaagaag 121452
>gb|AC182448.2| Mus musculus BAC clone RP24-490J20 from chromosome y, complete sequence Length = 222797 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 131876 acagtggaatgacaagaagac 131896
>gb|AC174478.3| Mus musculus BAC clone RP24-72B9 from chromosome y, complete sequence Length = 186313 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 5636 acagtggaatgacaagaagac 5656
>gb|AC182730.2| Mus musculus BAC clone RP24-254G5 from chromosome y, complete sequence Length = 162064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 87877 acagtggaatgacaagaagac 87857
>gb|AC182454.2| Mus musculus BAC clone RP24-141G12 from chromosome y, complete sequence Length = 181595 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 181061 acagtggaatgacaagaagac 181041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 14316 acagtggaatgacaagaagac 14336
>gb|AC175381.3| Mus musculus BAC clone RP24-195K22 from chromosome y, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 100740 acagtggaatgacaagaagac 100720
>gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome y, complete sequence Length = 196535 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 182170 acagtggaatgacaagaagac 182150
>emb|BX936344.9| Mouse DNA sequence from clone RP24-73J19 on chromosome X, complete sequence Length = 34976 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 15090 acagtggaatgacaagaagac 15110
>emb|BX936349.5| Mouse DNA sequence from clone RP23-416N9 on chromosome X, complete sequence Length = 96071 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 61857 acagtggaatgacaagaagac 61877
>emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chromosome X, complete sequence Length = 233474 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 147519 acagtggaatgacaagaagac 147539 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 28290 acagtggaatgacaagaagac 28310
>gb|AC182034.2| Mus musculus BAC clone RP24-188M3 from chromosome y, complete sequence Length = 164621 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 51280 acagtggaatgacaagaagac 51300
>gb|AC140922.3| Mus musculus BAC clone RP24-471B22 from chromosome y, complete sequence Length = 194152 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 156387 acagtggaatgacaagaagac 156367
>gb|AC181976.2| Mus musculus BAC clone RP24-413C10 from chromosome y, complete sequence Length = 150838 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 104389 acagtggaatgacaagaagac 104369
>gb|AC175461.3| Mus musculus BAC clone RP24-64J17 from chromosome y, complete sequence Length = 219754 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 158221 acagtggaatgacaagaagac 158241
>emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chromosome X, complete sequence Length = 184662 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 153487 acagtggaatgacaagaagac 153507 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 62406 acagtggaatgacaagaagac 62426
>gb|AC073944.6|AC073944 Arabidopsis thaliana chromosome 1 BAC T7N22 genomic sequence, complete sequence Length = 44540 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggatagttatctgctgatgacagatgatc 567 ||||||||| |||||| ||||| || |||||||| | || |||| |||| ||||||| Sbjct: 31045 aggagagtgttatcaaatgggcttcgcgctgggacacatacttgcttatgaacgatgatc 31104 Query: 568 aaatccattggtt 580 ||||||| ||||| Sbjct: 31105 aaatccactggtt 31117
>gb|AC145572.4| Mus musculus BAC clone RP24-95P13 from chromosome y, complete sequence Length = 181745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 178375 acagtggaatgacaagaagac 178395
>gb|AC175389.2| Mus musculus BAC clone RP24-152N3 from chromosome y, complete sequence Length = 123765 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 38662 acagtggaatgacaagaagac 38642
>gb|AC137633.2| Homo sapiens 12 BAC RP11-113I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 23301 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 tgcaagatttcagttggggaa 83 ||||||||||||||||||||| Sbjct: 15411 tgcaagatttcagttggggaa 15431
>gb|AC175033.2| Mus musculus BAC clone RP24-283I7 from chromosome y, complete sequence Length = 153678 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 62288 acagtggaatgacaagaagac 62308
>gb|AC140452.4| Mus musculus BAC clone RP24-120F24 from chromosome unknown, complete sequence Length = 199125 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 141403 acagtggaatgacaagaagac 141423
>emb|AL713974.9| Mouse DNA sequence from clone RP23-135I10 on chromosome X, complete sequence Length = 191603 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 90845 acagtggaatgacaagaagac 90865
>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete sequence Length = 181910 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 72132 acagtggaatgacaagaagac 72152
>emb|AL929008.19| Mouse DNA sequence from clone RP23-209O23 on chromosome X, complete sequence Length = 81277 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 35295 acagtggaatgacaagaagac 35315
>gb|AC145601.4| Mus musculus BAC clone RP24-229P8 from Y, complete sequence Length = 165064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 140157 acagtggaatgacaagaagac 140137
>gb|AC145485.4| Mus musculus BAC clone RP24-228I22 from Y, complete sequence Length = 144640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 28574 acagtggaatgacaagaagac 28594
>gb|AC142490.3| Mus musculus BAC clone RP24-362J19 from Y, complete sequence Length = 184480 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 170345 acagtggaatgacaagaagac 170365
>gb|AC145575.3| Mus musculus BAC clone RP24-103M14 from Y, complete sequence Length = 152955 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 135632 acagtggaatgacaagaagac 135652
>gb|AC140421.4| Mus musculus BAC clone RP24-441H14 from Y, complete sequence Length = 204088 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 56128 acagtggaatgacaagaagac 56108
>emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chromosome X, complete sequence Length = 240890 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 192033 acagtggaatgacaagaagac 192053 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 101029 acagtggaatgacaagaagac 101049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 10049 acagtggaatgacaagaagac 10069
>emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on chromosome X, complete sequence Length = 204157 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 105040 acagtggaatgacaagaagac 105020
>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete sequence Length = 209986 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 131211 acagtggaatgacaagaagac 131231
>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete sequence Length = 174151 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagtggaatgacaagaagac 397 ||||||||||||||||||||| Sbjct: 110918 acagtggaatgacaagaagac 110938
>gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome 16, complete sequence Length = 224160 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 ctgctgatgacagatgatca 568 |||||||||||||||||||| Sbjct: 87986 ctgctgatgacagatgatca 87967
>gb|AC093346.7| Mus musculus chromosome 5, clone RP23-15K13, complete sequence Length = 211278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gtggcctttgaagtaaaacc 352 |||||||||||||||||||| Sbjct: 184008 gtggcctttgaagtaaaacc 184027
>emb|AL929011.11| Mouse DNA sequence from clone RP23-55O12 on chromosome 2, complete sequence Length = 128341 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 atcacagggatgcacagagggatg 321 |||||||||||||| ||||||||| Sbjct: 46971 atcacagggatgcagagagggatg 46948
>ref|XM_383077.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02901.1) partial mRNA Length = 2580 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 agtggatcaagaaggtgctt 195 |||||||||||||||||||| Sbjct: 1895 agtggatcaagaaggtgctt 1914
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 199 tctatcaacatgggttccatgttggagccaaaggacaata 238 ||||||| | ||| |||||||||||| |||||||||||| Sbjct: 19362 tctatcagcttggtttccatgttggactcaaaggacaata 19401
>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the 5' end of the CAMK2G gene for calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma, the PLAU gene for plasminogen activator urokinase, three novel genes (FLJ35198), the 5' end of the VCL gene for vinculin and three CpG islands, complete sequence Length = 228098 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 tccatgttggagccaaagga 233 |||||||||||||||||||| Sbjct: 220024 tccatgttggagccaaagga 220043
>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tccacaatcatttgtccttt 287 |||||||||||||||||||| Sbjct: 94980 tccacaatcatttgtccttt 94961
>emb|AL133232.15| Human DNA sequence from clone RP5-897D18 on chromosome 20 Contains part of a gene for a putative novel protein, EST, STSs and GSSs, complete sequence Length = 95097 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 gaaagggtctcaaggaaaagattg 114 |||||| ||||||||||||||||| Sbjct: 49672 gaaaggttctcaaggaaaagattg 49695
>emb|AL611937.6| Mouse DNA sequence from clone RP23-221M24 on chromosome 11 Contains the genes for olfactory receptors MOR255-2, -1 and -6, a novel KRAB box containing protein, a high mobility group box 1 (Hmgb1) pseudogene and a olfactory receptor MOR255 pseudogene, complete sequence Length = 109397 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 tccacaatcatttgtccttt 287 |||||||||||||||||||| Sbjct: 10876 tccacaatcatttgtccttt 10895
>gb|AC091517.10| Homo sapiens 12 BAC RP11-777M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172346 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gacagatgatcaaatccatt 576 |||||||||||||||||||| Sbjct: 9757 gacagatgatcaaatccatt 9776
>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence Length = 245991 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ttatctgctgatgacagatg 564 |||||||||||||||||||| Sbjct: 174521 ttatctgctgatgacagatg 174540
>emb|CR857760.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0429 (from clone DKFZp469H0429) Length = 3765 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 508 aggagagtgatatcaagtgggcatctcgctgggata 543 |||| ||||| ||||| ||||| ||||||||||||| Sbjct: 777 aggaaagtgacatcaaatgggcctctcgctgggata 812
>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13, complete sequence Length = 182888 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 332 agtggcctttgaagtaaaaccctacagt 359 |||| |||||||||||||| |||||||| Sbjct: 29518 agtgccctttgaagtaaaaacctacagt 29491
>gb|AF325177.1| Mus musculus BAC470L12 sequence Length = 205602 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gtggcctttgaagtaaaacc 352 |||||||||||||||||||| Sbjct: 126919 gtggcctttgaagtaaaacc 126900
>gb|AC009123.7| Homo sapiens chromosome 16 clone RP11-486L19, complete sequence Length = 197046 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 ctcaaggaaaagattgaagatgag 122 ||||| |||||||||||||||||| Sbjct: 77471 ctcaaagaaaagattgaagatgag 77448
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cacagagggatgtttctagg 329 |||||||||||||||||||| Sbjct: 344614 cacagagggatgtttctagg 344633
>gb|AC008836.6|AC008836 Homo sapiens chromosome 5 clone CTD-2150D9, complete sequence Length = 157492 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aaagggtctcaaggaaaaga 111 |||||||||||||||||||| Sbjct: 129265 aaagggtctcaaggaaaaga 129246
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 573 cattggttctccattgtaaattctctcatgat 604 ||||||||||||||| | |||||| ||||||| Sbjct: 3857050 cattggttctccattttcaattctttcatgat 3857081
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tttcagttggggaaaaagaa 89 |||||||||||||||||||| Sbjct: 37544015 tttcagttggggaaaaagaa 37543996
>gb|AC147918.2| Xenopus tropicalis clone CH216-8N16, complete sequence Length = 210128 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gaacatgattcttgacaatc 150 |||||||||||||||||||| Sbjct: 33135 gaacatgattcttgacaatc 33154
>gb|AF289666.1|AF289666 Mus musculus GTF2I and GTF2IRD1 genes, partial cds Length = 130665 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gtggcctttgaagtaaaacc 352 |||||||||||||||||||| Sbjct: 22604 gtggcctttgaagtaaaacc 22623
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tttcagttggggaaaaagaa 89 |||||||||||||||||||| Sbjct: 138552 tttcagttggggaaaaagaa 138533
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tttcagttggggaaaaagaa 89 |||||||||||||||||||| Sbjct: 4489 tttcagttggggaaaaagaa 4470
>dbj|AK100895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B19, full insert sequence Length = 1386 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 573 cattggttctccattgtaaattctctcatgat 604 ||||||||||||||| | |||||| ||||||| Sbjct: 945 cattggttctccattttcaattctttcatgat 914
>ref|NM_208751.1| Eremothecium gossypii ACL006Wp (ACL006W), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cacagagggatgtttctagg 329 |||||||||||||||||||| Sbjct: 220 cacagagggatgtttctagg 239
>dbj|AK069143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K23, full insert sequence Length = 2132 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 573 cattggttctccattgtaaattctctcatgat 604 ||||||||||||||| | |||||| ||||||| Sbjct: 741 cattggttctccattttcaattctttcatgat 772
>gb|AC026762.17| Homo sapiens 3 BAC RP11-373C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 54780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 tggggaaaaagaaggaaagg 96 |||||||||||||||||||| Sbjct: 15772 tggggaaaaagaaggaaagg 15753
>gb|AC136276.2| Homo sapiens 3 BAC RP11-816F6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60733 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cagagggatgtttctaggat 331 |||||||||||||||||||| Sbjct: 45636 cagagggatgtttctaggat 45655
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 atcaacatgggttccatgtt 221 |||||||||||||||||||| Sbjct: 1881005 atcaacatgggttccatgtt 1881024
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ctcatctgaccacttgcgat 416 |||||||||||||||||||| Sbjct: 51026 ctcatctgaccacttgcgat 51045
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 573 cattggttctccattgtaaattctctcatgat 604 ||||||||||||||| | |||||| ||||||| Sbjct: 3857024 cattggttctccattttcaattctttcatgat 3857055
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 573 cattggttctccattgtaaattctctcatgat 604 ||||||||||||||| | |||||| ||||||| Sbjct: 19026 cattggttctccattttcaattctttcatgat 19057
>emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chromosome X, complete sequence Length = 121936 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 acagtggaatgacaagaaga 396 |||||||||||||||||||| Sbjct: 94784 acagtggaatgacaagaaga 94765 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,973,589 Number of Sequences: 3902068 Number of extensions: 5973589 Number of successful extensions: 123159 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 122554 Number of HSP's gapped (non-prelim): 596 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
