| Clone Name | bags5o24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... | 42 | 0.054 | 2 | gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... | 42 | 0.054 | 3 | dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... | 42 | 0.054 | 4 | dbj|AK100825.1| Oryza sativa (japonica cultivar-group) cDNA clon... | 42 | 0.054 | 5 | dbj|AK058234.1| Oryza sativa (japonica cultivar-group) cDNA clon... | 42 | 0.054 |
|---|
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 42.1 bits (21), Expect = 0.054 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 gcttacagcnaaaggctaacttcttntgatgctga 35 ||||| ||| ||||||||||||| | ||||||||| Sbjct: 145304 gcttatagcaaaaggctaacttcctctgatgctga 145270
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 42.1 bits (21), Expect = 0.054 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 gcttacagcnaaaggctaacttcttntgatgctga 35 ||||| ||| ||||||||||||| | ||||||||| Sbjct: 17067 gcttatagcaaaaggctaacttcctctgatgctga 17033
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.054 Identities = 31/35 (88%) Strand = Plus / Minus Query: 1 gcttacagcnaaaggctaacttcttntgatgctga 35 ||||| ||| ||||||||||||| | ||||||||| Sbjct: 25282463 gcttatagcaaaaggctaacttcctctgatgctga 25282429
>dbj|AK100825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122K10, full insert sequence Length = 937 Score = 42.1 bits (21), Expect = 0.054 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gcttacagcnaaaggctaacttcttntgatgctga 35 ||||| ||| ||||||||||||| | ||||||||| Sbjct: 320 gcttatagcaaaaggctaacttcctctgatgctga 354
>dbj|AK058234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-C09, full insert sequence Length = 912 Score = 42.1 bits (21), Expect = 0.054 Identities = 31/35 (88%) Strand = Plus / Plus Query: 1 gcttacagcnaaaggctaacttcttntgatgctga 35 ||||| ||| ||||||||||||| | ||||||||| Sbjct: 295 gcttatagcaaaaggctaacttcctctgatgctga 329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 26,898 Number of Sequences: 3902068 Number of extensions: 26898 Number of successful extensions: 6789 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 6781 Number of HSP's gapped (non-prelim): 8 length of query: 35 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 15 effective length of database: 17,155,003,908 effective search space: 257325058620 effective search space used: 257325058620 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)