ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5o23 |
|---|---|
| Clone Library Name | barley_pub |
>ITR2_MOMCH (P10295) Trypsin inhibitor 2 (Trypsin inhibitor II) (MCTI-II)| (MCTI-A) Length = 28 Score = 31.6 bits (70), Expect = 2.1 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%) Frame = +3 Query: 438 RCWNKCNHDDACLTQCFC-DWHC 503 R W +C D C+ QC C D HC Sbjct: 5 RIWMECKRDSDCMAQCICVDGHC 27
>RASA1_BOVIN (P09851) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1044 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +1 Query: 241 IDPNCRVLTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADHRYSSHRLELANIVMK 414 I+P + S + ++P E+ EF + I E+H++ H R LA+I++K Sbjct: 698 IEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLK 755
>DAP2_YEAST (P18962) Dipeptidyl aminopeptidase B (EC 3.4.14.-) (DPAP B) (YSCV)| Length = 818 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Frame = +1 Query: 256 RVLTVHGSDDDVVPSEDALEFHKYIG-----NHEVHIIEGADHRYSSHRLELANIVM 411 R L +HG+ DD V +++L+F + N++VH+ +DH H AN+++ Sbjct: 747 RFLLMHGTGDDNVHFQNSLKFLDLLDLNGVENYDVHVFPDSDHSIRYHN---ANVIV 800
>RASA1_RAT (P50904) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1038 Score = 31.6 bits (70), Expect = 2.1 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +1 Query: 241 IDPNCRVLTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADHRYSSHRLELANIVMK 414 I+P + S + ++P E+ EF + I E+H++ H R LA+I++K Sbjct: 692 IEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLK 749
>HEX_ADE08 (P36852) Hexon protein (Late protein 2) (Fragment)| Length = 517 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R SA S DP+ R++ HG +D++ Sbjct: 276 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIENHGVEDEL 327
>HEX_ADE09 (P36853) Hexon protein (Late protein 2)| Length = 953 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R SA S DP+ R++ HG +D++ Sbjct: 357 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIENHGVEDEL 408
>ZEN_DROSU (Q24648) Protein zerknuellt| Length = 373 Score = 31.2 bits (69), Expect = 2.7 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -3 Query: 325 IYEIPEHPPMAQHHRQNHE 269 + IPEHP + QHH Q+H+ Sbjct: 47 VSSIPEHPSLQQHHHQHHQ 65
>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)| (HMSH) Length = 281 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 247 PNCRVLTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADH-RYSSHRLELANIVMKFV 420 PN L +HG +D ++P + +L ++I N ++H+ H H A +V F+ Sbjct: 216 PN-ETLVIHGREDRIIPLQASLTLAQWIPNAQLHVFGQCGHWTQIEHAERFARLVENFL 273
>IELI_MOMCH (P10296) Elastase inhibitor 4 (Elastase inhibitor IV) (MCEI-IV)| [Contains: Elastase inhibitor 3 (Elastase inhibitor III) (MCEI-III); Elastase inhibitor 2 (Elastase inhibitor II) (MCEI-I); Elastase inhibitor 1 (Elastase inhibitor I) (MCEI-I)] Length = 31 Score = 30.8 bits (68), Expect = 3.6 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%) Frame = +3 Query: 444 WNKCNHDDACLTQCFC-DWHC 503 W +C D CL QC C D HC Sbjct: 10 WMECKRDSDCLAQCICVDGHC 30
>APTH1_CANGA (Q6FW75) Acyl-protein thioesterase 1 (EC 3.1.2.-)| Length = 230 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +1 Query: 208 LRIDMQSACMSIDPNCRVLTVHGSDDDVVP---SEDALEFHKYIGNHE 342 LR ++Q +++PN V HG DDVVP EF K G E Sbjct: 148 LRNELQETRKNLNPNTPVFHGHGESDDVVPFPIGVQTAEFFKSAGELE 195
>HEX_ADE12 (P19900) Hexon protein (Late protein 2)| Length = 919 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDM--QSACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ ++L DR R SA S DP+ RV+ HG +D++ Sbjct: 327 VDLQDRNTELSYQLMLDALGDRTRYFSLWNSAVDSYDPDVRVIENHGVEDEL 378
>BPHL_HUMAN (Q86WA6) Valacyclovir hydrolase precursor (EC 3.1.-.-) (VACVase)| (Biphenyl hydrolase-like protein) (Biphenyl hydrolase-related protein) (Bph-rp) (Breast epithelial mucin-associated antigen) (MCNAA) Length = 291 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 253 CRVLTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADH 369 C L VHG D +VP A HK++ +H++ H Sbjct: 234 CPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKH 272
>RASA1_HUMAN (P20936) Ras GTPase-activating protein 1 (GTPase-activating| protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP) Length = 1047 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/58 (25%), Positives = 29/58 (50%) Frame = +1 Query: 241 IDPNCRVLTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADHRYSSHRLELANIVMK 414 I+P + S + ++P E+ EF + I E+H++ H R LA+I+++ Sbjct: 701 IEPGSLRVRARYSMEKIMPEEEYSEFKELILQKELHVVYALSHVCGQDRTLLASILLR 758
>DMPD_PSEUF (P19076) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)| (HMSH) Length = 283 Score = 30.0 bits (66), Expect = 6.1 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = +1 Query: 262 LTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADH-RYSSHRLELANIVMKFV 420 L +HG +D ++P + +L +I ++H+ H H A++V F+ Sbjct: 221 LVIHGREDQIIPLQTSLTLADWIARAQLHVFGQCGHWTQIEHAARFASLVGDFL 274
>HEX_ADE02 (P03277) Hexon protein (Late protein 2)| Length = 967 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +S+ DR R A S DP+ R++ HG++D++ Sbjct: 370 VDLQDRNTELSYQLLLDSIGDRTRYFSMWNQAVDSYDPDVRIIENHGTEDEL 421
>ACPS_CHLTE (Q8KB56) Holo-[acyl-carrier-protein] synthase (EC 2.7.8.7)| (Holo-ACP synthase) (4'-phosphopantetheinyl transferase acpS) Length = 117 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Frame = +1 Query: 10 VIIYASMYQDVSR---VINISGRFDLKRGIADRLGSGYMERISQHGFIDVAQKTGQFMYR 180 ++ A M Q +S+ V +++GRF K ++ LG+G + ++ H + +TG+ Sbjct: 28 ILTSAEMAQCLSKPDPVASLAGRFAAKEAVSKALGTGIAKGLTWHSIEVLNDETGKPCVS 87 Query: 181 VTKESLMDRLRIDM 222 V S R+ I + Sbjct: 88 VYAPSFSGRVSISI 101
>HEX_ADE05 (P04133) Hexon protein (Late protein 2)| Length = 951 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +S+ DR R A S DP+ R++ HG++D++ Sbjct: 358 VDLQDRNTELSYQLLLDSIGDRTRYFSMWNQAVDSYDPDVRIIENHGTEDEL 409
>HEX_ADE06 (Q04966) Hexon protein (Late protein 2) (Fragment)| Length = 465 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +S+ DR R A S DP+ R++ HG++D++ Sbjct: 248 VDLQDRNTELSYQLLLDSIGDRTRYFSMWNQAVDSYDPDVRIIENHGTEDEL 299
>DING_MYCTU (P64314) Probable ATP-dependent helicase dinG homolog (EC 3.6.1.-)| Length = 664 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +1 Query: 79 KRGIADRLGSGYMERISQHGFIDVAQKTGQFMYRVTKESLMDRLRIDMQSA 231 +R +A R G+G+M + H + +AQ +G+ + RVT ++ L M +A Sbjct: 577 QRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATA 627
>DING_MYCBO (P64315) Probable ATP-dependent helicase dinG homolog (EC 3.6.1.-)| Length = 664 Score = 30.0 bits (66), Expect = 6.1 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = +1 Query: 79 KRGIADRLGSGYMERISQHGFIDVAQKTGQFMYRVTKESLMDRLRIDMQSA 231 +R +A R G+G+M + H + +AQ +G+ + RVT ++ L M +A Sbjct: 577 QRAVAARGGNGFMTVAASHAALLLAQGSGRLLRRVTDRGVVAVLDSRMATA 627
>HEX_ADE01 (Q04965) Hexon protein (Late protein 2) (Fragment)| Length = 467 Score = 30.0 bits (66), Expect = 6.1 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +S+ DR R A S DP+ R++ HG++D++ Sbjct: 252 VDLQDRNTELSYQLLLDSIGDRTRYFSMWNQAVDSYDPDVRIIENHGTEDEL 303
>HEX_ADE04 (P36850) Hexon protein (Late protein 2) (Fragment)| Length = 447 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R A S DP+ R++ HG +D++ Sbjct: 241 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGVEDEL 292
>PIP_SERMA (O32449) Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl| aminopeptidase) (PAP) Length = 317 Score = 29.6 bits (65), Expect = 7.9 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +1 Query: 268 VHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADHRYSS----HRLELA 399 VHG D ++A + K E+HI+EGA H Y H+L +A Sbjct: 263 VHGRYDMACQVQNAWDLAKAWPEAELHIVEGAGHSYDEPGILHQLMIA 310
>TODF_PSEPU (P23133) 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase (EC 3.1.1.-)| (HOHH) Length = 276 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +1 Query: 262 LTVHGSDDDVVPSEDALEFHKYIGNHEVHIIEGADH 369 L +HG DD V+P E +L ++ I ++H+ H Sbjct: 219 LILHGRDDRVIPLETSLRLNQLIEPSQLHVFGRCGH 254
>HEX_ADE03 (P36849) Hexon protein (Late protein 2)| Length = 944 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R A S DP+ R++ HG +D++ Sbjct: 352 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGIEDEL 403
>HEX_ADE16 (P36854) Hexon protein (Late protein 2)| Length = 940 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R A S DP+ R++ HG +D++ Sbjct: 342 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGVEDEL 393
>HEX_ADE31 (P36855) Hexon protein (Late protein 2) (Fragment)| Length = 468 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ ++L DR R SA S DP+ R++ HG +D++ Sbjct: 231 VDLQDRNTELSYQLMLDALGDRSRYFSMWNSAVDSYDPDVRIIENHGVEDEL 282
>HEX_ADE07 (P36851) Hexon protein (Late protein 2)| Length = 937 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 142 IDVAQKTGQFMYRVTKESLMDRLRIDMQ--SACMSIDPNCRVLTVHGSDDDV 291 +D+ + + Y++ +SL DR R A S DP+ R++ HG +D++ Sbjct: 348 VDLQDRNTELSYQLLLDSLGDRTRYFSMWNQAVDSYDPDVRIIENHGIEDEL 399
>PRXC_STRLI (P49323) Non-heme chloroperoxidase (EC 1.11.1.10) (Chloride| peroxidase) (CPO-L) (Chloroperoxidase L) Length = 275 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 259 VLTVHGSDDDVVPSEDAL-EFHKYIGNHEVHIIEGADHRYSSHRLELAN 402 VL HG+DD VVP DA + + + N + EG H S E+ N Sbjct: 218 VLVAHGTDDQVVPYADAAPKSAELLANATLKSYEGLPHGMLSTHPEVLN 266 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,614,322 Number of Sequences: 219361 Number of extensions: 1818899 Number of successful extensions: 4594 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4592 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
