>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  281 bits (142), Expect = 1e-72
 Identities = 298/350 (85%)
 Strand = Plus / Minus

                                                                           
Query: 68      gatttgatctgaaacgtggaattgcagatcgtcttggcagtggctatatggaaaggataa 127
               |||||||||| | |||||||||||| ||||||||||| ||||  |||||||||| |||| 
Sbjct: 5047743 gatttgatctaagacgtggaattgctgatcgtcttggaagtgattatatggaaaagatag 5047684

                                                                           
Query: 128     gtcaacatggtttcattgacgtggcacagaaaacaggacagttcatgtaccgtgtgacca 187
                 |   |||| |||||||| |||| |  |||||||||||  | ||| |||||||| ||||
Sbjct: 5047683 accggtatgggttcattgatgtgggagtgaaaacaggacgttccatctaccgtgtaacca 5047624

                                                                           
Query: 188     aagaaagtctgatggaccgtcttaggatagatatgcaaagtgcatgcatgtctattgacc 247
               |||||||||||||||| || |||| |||||||||| | |||||||||||||||||||| |
Sbjct: 5047623 aagaaagtctgatggatcgccttaagatagatatgaagagtgcatgcatgtctattgatc 5047564

                                                                           
Query: 248     ctaattgcagggtcctgacagttcatggttctgacgatgatgttgtgccatcggaggatg 307
               |||| |||||||| |||||| ||||||||||||| |||||| |||||||||| |||||||
Sbjct: 5047563 ctaaatgcagggttctgacaattcatggttctgatgatgatattgtgccatcagaggatg 5047504

                                                                           
Query: 308     ctctggaatttcataaatatataggcaaccacgaagtgcatattatcgaaggagctgatc 367
               | || |||||| | ||||||||| |||| || ||| ||  |||||| |||||||||||||
Sbjct: 5047503 ccctagaatttgacaaatatataagcaatcatgaattgagtattattgaaggagctgatc 5047444

                                                                 
Query: 368     atagatattcatctcatcggcttgagttggctaacattgtaatgaaattt 417
               ||||||||||||  ||||  ||||||||||||| ||||||| ||||||||
Sbjct: 5047443 atagatattcattgcatcaccttgagttggctaccattgtactgaaattt 5047394

>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score =  281 bits (142), Expect = 1e-72
 Identities = 298/350 (85%)
 Strand = Plus / Minus

                                                                          
Query: 68     gatttgatctgaaacgtggaattgcagatcgtcttggcagtggctatatggaaaggataa 127
              |||||||||| | |||||||||||| ||||||||||| ||||  |||||||||| |||| 
Sbjct: 112197 gatttgatctaagacgtggaattgctgatcgtcttggaagtgattatatggaaaagatag 112138

                                                                          
Query: 128    gtcaacatggtttcattgacgtggcacagaaaacaggacagttcatgtaccgtgtgacca 187
                |   |||| |||||||| |||| |  |||||||||||  | ||| |||||||| ||||
Sbjct: 112137 accggtatgggttcattgatgtgggagtgaaaacaggacgttccatctaccgtgtaacca 112078

                                                                          
Query: 188    aagaaagtctgatggaccgtcttaggatagatatgcaaagtgcatgcatgtctattgacc 247
              |||||||||||||||| || |||| |||||||||| | |||||||||||||||||||| |
Sbjct: 112077 aagaaagtctgatggatcgccttaagatagatatgaagagtgcatgcatgtctattgatc 112018

                                                                          
Query: 248    ctaattgcagggtcctgacagttcatggttctgacgatgatgttgtgccatcggaggatg 307
              |||| |||||||| |||||| ||||||||||||| |||||| |||||||||| |||||||
Sbjct: 112017 ctaaatgcagggttctgacaattcatggttctgatgatgatattgtgccatcagaggatg 111958

                                                                          
Query: 308    ctctggaatttcataaatatataggcaaccacgaagtgcatattatcgaaggagctgatc 367
              | || |||||| | ||||||||| |||| || ||| ||  |||||| |||||||||||||
Sbjct: 111957 ccctagaatttgacaaatatataagcaatcatgaattgagtattattgaaggagctgatc 111898

                                                                
Query: 368    atagatattcatctcatcggcttgagttggctaacattgtaatgaaattt 417
              ||||||||||||  ||||  ||||||||||||| ||||||| ||||||||
Sbjct: 111897 atagatattcattgcatcaccttgagttggctaccattgtactgaaattt 111848

>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score =  281 bits (142), Expect = 1e-72
 Identities = 298/350 (85%)
 Strand = Plus / Plus

                                                                          
Query: 68     gatttgatctgaaacgtggaattgcagatcgtcttggcagtggctatatggaaaggataa 127
              |||||||||| | |||||||||||| ||||||||||| ||||  |||||||||| |||| 
Sbjct: 121964 gatttgatctaagacgtggaattgctgatcgtcttggaagtgattatatggaaaagatag 122023

                                                                          
Query: 128    gtcaacatggtttcattgacgtggcacagaaaacaggacagttcatgtaccgtgtgacca 187
                |   |||| |||||||| |||| |  |||||||||||  | ||| |||||||| ||||
Sbjct: 122024 accggtatgggttcattgatgtgggagtgaaaacaggacgttccatctaccgtgtaacca 122083

                                                                          
Query: 188    aagaaagtctgatggaccgtcttaggatagatatgcaaagtgcatgcatgtctattgacc 247
              |||||||||||||||| || |||| |||||||||| | |||||||||||||||||||| |
Sbjct: 122084 aagaaagtctgatggatcgccttaagatagatatgaagagtgcatgcatgtctattgatc 122143

                                                                          
Query: 248    ctaattgcagggtcctgacagttcatggttctgacgatgatgttgtgccatcggaggatg 307
              |||| |||||||| |||||| ||||||||||||| |||||| |||||||||| |||||||
Sbjct: 122144 ctaaatgcagggttctgacaattcatggttctgatgatgatattgtgccatcagaggatg 122203

                                                                          
Query: 308    ctctggaatttcataaatatataggcaaccacgaagtgcatattatcgaaggagctgatc 367
              | || |||||| | ||||||||| |||| || ||| ||  |||||| |||||||||||||
Sbjct: 122204 ccctagaatttgacaaatatataagcaatcatgaattgagtattattgaaggagctgatc 122263

                                                                
Query: 368    atagatattcatctcatcggcttgagttggctaacattgtaatgaaattt 417
              ||||||||||||  ||||  ||||||||||||| ||||||| ||||||||
Sbjct: 122264 atagatattcattgcatcaccttgagttggctaccattgtactgaaattt 122313

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  281 bits (142), Expect = 1e-72
 Identities = 298/350 (85%)
 Strand = Plus / Minus

                                                                           
Query: 68      gatttgatctgaaacgtggaattgcagatcgtcttggcagtggctatatggaaaggataa 127
               |||||||||| | |||||||||||| ||||||||||| ||||  |||||||||| |||| 
Sbjct: 5046958 gatttgatctaagacgtggaattgctgatcgtcttggaagtgattatatggaaaagatag 5046899

                                                                           
Query: 128     gtcaacatggtttcattgacgtggcacagaaaacaggacagttcatgtaccgtgtgacca 187
                 |   |||| |||||||| |||| |  |||||||||||  | ||| |||||||| ||||
Sbjct: 5046898 accggtatgggttcattgatgtgggagtgaaaacaggacgttccatctaccgtgtaacca 5046839

                                                                           
Query: 188     aagaaagtctgatggaccgtcttaggatagatatgcaaagtgcatgcatgtctattgacc 247
               |||||||||||||||| || |||| |||||||||| | |||||||||||||||||||| |
Sbjct: 5046838 aagaaagtctgatggatcgccttaagatagatatgaagagtgcatgcatgtctattgatc 5046779

                                                                           
Query: 248     ctaattgcagggtcctgacagttcatggttctgacgatgatgttgtgccatcggaggatg 307
               |||| |||||||| |||||| ||||||||||||| |||||| |||||||||| |||||||
Sbjct: 5046778 ctaaatgcagggttctgacaattcatggttctgatgatgatattgtgccatcagaggatg 5046719

                                                                           
Query: 308     ctctggaatttcataaatatataggcaaccacgaagtgcatattatcgaaggagctgatc 367
               | || |||||| | ||||||||| |||| || ||| ||  |||||| |||||||||||||
Sbjct: 5046718 ccctagaatttgacaaatatataagcaatcatgaattgagtattattgaaggagctgatc 5046659

                                                                 
Query: 368     atagatattcatctcatcggcttgagttggctaacattgtaatgaaattt 417
               ||||||||||||  ||||  ||||||||||||| ||||||| ||||||||
Sbjct: 5046658 atagatattcattgcatcaccttgagttggctaccattgtactgaaattt 5046609

>gb|AC007131.4| Homo sapiens BAC clone RP11-179A20 from 2, complete sequence
          Length = 160087

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 508   attttctttccaacatgttacaaaatt 534
             |||||||||||| ||||||||||||||
Sbjct: 89749 attttctttccaccatgttacaaaatt 89723

>gb|AC132216.7| Homo sapiens chromosome 11, clone RP13-786C16, complete sequence
          Length = 174373

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 506   tcattttctttccaacatgttac 528
             |||||||||||||||||||||||
Sbjct: 62907 tcattttctttccaacatgttac 62929

>gb|AC148775.2| Medicago truncatula chromosome 2 BAC clone mth2-62i21, complete
             sequence
          Length = 115046

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 254   gcagggtcctgacagttcatggttct 279
             |||||||||| |||||||||||||||
Sbjct: 66769 gcagggtccttacagttcatggttct 66794

>gb|AC113473.20| Mus musculus chromosome 1, clone RP23-280F6, complete sequence
          Length = 221025

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    atcattttctttccaacatgt 525
              |||||||||||||||||||||
Sbjct: 201322 atcattttctttccaacatgt 201342

>gb|AC098570.7| Mus musculus chromosome 1, clone RP23-278N11, complete sequence
          Length = 193097

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 505    atcattttctttccaacatgt 525
              |||||||||||||||||||||
Sbjct: 156418 atcattttctttccaacatgt 156398

>ref|XM_454513.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E12529g predicted mRNA
          Length = 3021

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   atgtatcaagatgtatctcgt 48
            |||||||||||||||||||||
Sbjct: 1660 atgtatcaagatgtatctcgt 1640

>emb|AL590402.10| Human DNA sequence from clone RP11-460L11 on chromosome 6 Contains the
             3' end of gene KIAA1320, complete sequence
          Length = 45126

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 415   tttgttacatctgtctgacag 435
             |||||||||||||||||||||
Sbjct: 14613 tttgttacatctgtctgacag 14593

>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2234072

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 28      atgtatcaagatgtatctcgt 48
               |||||||||||||||||||||
Sbjct: 1109209 atgtatcaagatgtatctcgt 1109229

>emb|BX640499.5| Zebrafish DNA sequence from clone DKEYP-67D2 in linkage group 9, complete
              sequence
          Length = 184606

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 404    ttgtaatgaaatttgttacat 424
              |||||||||||||||||||||
Sbjct: 121667 ttgtaatgaaatttgttacat 121687

>dbj|AK220296.1| Mus musculus mRNA for mKIAA4161 protein
          Length = 3311

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 505  atcattttctttccaacatgt 525
            |||||||||||||||||||||
Sbjct: 1358 atcattttctttccaacatgt 1338

>gb|AC154338.2| Mus musculus BAC clone RP23-247M16 from chromosome 17, complete
             sequence
          Length = 190285

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   taatgaaatttgttacatctg 427
             |||||||||||||||||||||
Sbjct: 32723 taatgaaatttgttacatctg 32703

>emb|BX248311.6| Zebrafish DNA sequence from clone BUSM1-71F1 in linkage group 9,
             complete sequence
          Length = 143593

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   ttgtaatgaaatttgttacat 424
             |||||||||||||||||||||
Sbjct: 70344 ttgtaatgaaatttgttacat 70364

>ref|XM_638675.1| Dictyostelium discoideum hypothetical protein (DDB0167464), partial
           mRNA
          Length = 1785

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 609 agtcaattgcatattttgat 628
           ||||||||||||||||||||
Sbjct: 737 agtcaattgcatattttgat 756

>gb|AC113113.18| Mus musculus chromosome 16, clone RP23-334P10, complete sequence
          Length = 216380

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   atgctctggaatttcataaa 324
             ||||||||||||||||||||
Sbjct: 55958 atgctctggaatttcataaa 55977

>gb|AC100729.21| Mus musculus chromosome 19, clone RP24-286E16, complete sequence
          Length = 167242

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    tggaaaggataagtcaacat 135
              ||||||||||||||||||||
Sbjct: 134977 tggaaaggataagtcaacat 134958

>emb|AL049647.7|HSJ1027G4 Human DNA sequence from clone RP5-1027G4 on chromosome 20 Contains
           part of the SLC24A3 gene for solute carrier family 24
           (sodium/potassium/calcium exchanger) member 3 and a
           novel gene, complete sequence
          Length = 164845

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 tttcataaatatataggcaa 335
           ||||||||||||||||||||
Sbjct: 182 tttcataaatatataggcaa 163

>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    tgttcgtgctcgtggcactg 583
              ||||||||||||||||||||
Sbjct: 249102 tgttcgtgctcgtggcactg 249083

>gb|AF176348.2| Porcine reproductive and respiratory syndrome virus isolate PA8
            complete genome
          Length = 15483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  ttgaccctaattgcagggtc 261
            ||||||||||||||||||||
Sbjct: 4775 ttgaccctaattgcagggtc 4794

>emb|BX321886.14| Zebrafish DNA sequence from clone DKEYP-46C9 in linkage group 8,
             complete sequence
          Length = 168093

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 486   ttttgtgattggcattgcca 505
             ||||||||||||||||||||
Sbjct: 20966 ttttgtgattggcattgcca 20985

>gb|AC092653.3| Homo sapiens BAC clone RP11-434P11 from 2, complete sequence
          Length = 213073

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ggaaaggataagtcaacatggttt 140
             ||||||||||||||| ||||||||
Sbjct: 31652 ggaaaggataagtcatcatggttt 31675

>emb|BX682558.6| Zebrafish DNA sequence from clone DKEY-225F5 in linkage group 3, complete
              sequence
          Length = 146807

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    atgaaatttgttacatctgt 428
              ||||||||||||||||||||
Sbjct: 134904 atgaaatttgttacatctgt 134885

>gb|AC015450.5|AC015450 Arabidopsis thaliana chromosome 1 BAC F14G6 genomic sequence, complete
             sequence
          Length = 100806

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 536   tcctatcaaatttagttgaa 555
             ||||||||||||||||||||
Sbjct: 33346 tcctatcaaatttagttgaa 33327

>emb|BX825688.1|CNS0A6EO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL56ZF08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1039

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 334 aaccacgaagtgcatattatcgaaggagctgatcat 369
           ||||||||| | |||||||| | |||||||||||||
Sbjct: 832 aaccacgaactacatattataggaggagctgatcat 867

>gb|AF547983.1| Schizosaccharomyces japonicus mitochondrial DNA, complete genome
          Length = 80059

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ttgtaatgaaatttgttaca 423
             ||||||||||||||||||||
Sbjct: 69971 ttgtaatgaaatttgttaca 69952

>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
              complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 609    agtcaattgcatattttgat 628
              ||||||||||||||||||||
Sbjct: 282688 agtcaattgcatattttgat 282669

>gb|AC012394.3|AC012394 Arabidopsis thaliana chromosome 1 BAC F15M4 genomic sequence,
            complete sequence
          Length = 94487

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 536  tcctatcaaatttagttgaa 555
            ||||||||||||||||||||
Sbjct: 8417 tcctatcaaatttagttgaa 8436

>gb|AC140457.3| Mus musculus BAC clone RP23-15F7 from 12, complete sequence
          Length = 215722

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 532    attatcctatcaaatttagttgaa 555
              |||||||||||||||||| |||||
Sbjct: 152301 attatcctatcaaatttacttgaa 152278

>gb|AC122329.4| Mus musculus BAC clone RP23-341A12 from 19, complete sequence
          Length = 192481

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    tggaaaggataagtcaacat 135
              ||||||||||||||||||||
Sbjct: 133782 tggaaaggataagtcaacat 133763



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tggaaaggataagtcaacat 135
             ||||||||||||||||||||
Sbjct: 40771 tggaaaggataagtcaacat 40752

>gb|AC120840.31| Mus musculus chromosome 19, clone RP24-539E24, complete sequence
          Length = 189283

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tggaaaggataagtcaacat 135
              ||||||||||||||||||||
Sbjct: 137236 tggaaaggataagtcaacat 137255

>gb|L19261.1|ATHHMGCOAR Arabidopsis thaliana HMG-cOA reductase gene, complete cds
          Length = 3716

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 536  tcctatcaaatttagttgaa 555
            ||||||||||||||||||||
Sbjct: 1594 tcctatcaaatttagttgaa 1575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,231,872
Number of Sequences: 3902068
Number of extensions: 6231872
Number of successful extensions: 168135
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167918
Number of HSP's gapped (non-prelim): 217
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)