ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6d22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_185755.2| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
2dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
3dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 391 e-105
4gb|AY108648.1| Zea mays PCO090155 mRNA sequence 246 5e-62
5gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence 141 2e-30
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
7dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
8emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for ... 54 4e-04
9gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 42 1.5
10gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosom... 42 1.5
11gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome... 40 5.7
12ref|XM_665604.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.7
13gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosom... 40 5.7
14emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chr... 40 5.7
15emb|AJ328099.1|HSA328099 Homo sapiens genomic sequence surroundi... 40 5.7
16emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chro... 40 5.7
17emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 40 5.7
18dbj|AB032402.1| Mus musculus BSP gene for brain serine protease,... 40 5.7

>ref|NM_185755.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1694

 Score =  391 bits (197), Expect = e-105
 Identities = 363/422 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtccgttgcttgatgaggatggaccatcgtatgttcatgnnnnnnngaatatcttgcg 60
           |||||| ||||||||||||||||| ||||| |||||||  |       ||||||||||||
Sbjct: 251 aggtcctttgcttgatgaggatgggccatcctatgttcgagtgttcctgaatatcttgcg 310

                                                                       
Query: 61  aagcatctctaaggaagagaccgnggaatatgtgcttgccctcattgatgagatgcttgc 120
            | |||||| |||||||| || |  ||||||||||||||||| |||||||||||||||||
Sbjct: 311 gaacatctccaaggaagatactgttgaatatgtgcttgccctgattgatgagatgcttgc 370

                                                                       
Query: 121 agcgaatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacattta 180
           ||  ||||||||||||||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 371 agtaaatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatcta 430

                                                                       
Query: 181 cgatcctttcctaagactgctcttgaaaggtnactggttcgtacaggaaaagagctgtaa 240
           ||| |||||||||||| |||||||||||||| ||||||| || || ||||| || |||||
Sbjct: 431 cgaccctttcctaagattgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaa 490

                                                                       
Query: 241 gatattgactcacttaataagtgcgagacctaagcttcanaacggcatggttccaaatgg 300
           ||||||||| ||  ||||||||||  |||| ||| | || || ||||| |||||||||||
Sbjct: 491 gatattgacccaaataataagtgcacgacccaagatgcagaatggcatagttccaaatgg 550

                                                                       
Query: 301 agaggcttcaaattcaaagagcaagcttacatcaattcatgatgtgttaaagggcttggt 360
           ||||||||||||||||||||||||||| ||||| | ||| ||||||||||  || |||||
Sbjct: 551 agaggcttcaaattcaaagagcaagctaacatctactcaagatgtgttaagaggtttggt 610

                                                                       
Query: 361 tgattggctctgttctcagctcaggaaccccacccacccgaactgntctattcctactgc 420
           ||||||||||||||||||||| ||||| || |||||||| ||||| ||| ||||||||||
Sbjct: 611 tgattggctctgttctcagctgaggaatcctacccacccaaactgttctgttcctactgc 670

             
Query: 421 ta 422
           ||
Sbjct: 671 ta 672



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>dbj|AK104331.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D11, full
           insert sequence
          Length = 1694

 Score =  391 bits (197), Expect = e-105
 Identities = 363/422 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtccgttgcttgatgaggatggaccatcgtatgttcatgnnnnnnngaatatcttgcg 60
           |||||| ||||||||||||||||| ||||| |||||||  |       ||||||||||||
Sbjct: 251 aggtcctttgcttgatgaggatgggccatcctatgttcgagtgttcctgaatatcttgcg 310

                                                                       
Query: 61  aagcatctctaaggaagagaccgnggaatatgtgcttgccctcattgatgagatgcttgc 120
            | |||||| |||||||| || |  ||||||||||||||||| |||||||||||||||||
Sbjct: 311 gaacatctccaaggaagatactgttgaatatgtgcttgccctgattgatgagatgcttgc 370

                                                                       
Query: 121 agcgaatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacattta 180
           ||  ||||||||||||||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 371 agtaaatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatcta 430

                                                                       
Query: 181 cgatcctttcctaagactgctcttgaaaggtnactggttcgtacaggaaaagagctgtaa 240
           ||| |||||||||||| |||||||||||||| ||||||| || || ||||| || |||||
Sbjct: 431 cgaccctttcctaagattgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaa 490

                                                                       
Query: 241 gatattgactcacttaataagtgcgagacctaagcttcanaacggcatggttccaaatgg 300
           ||||||||| ||  ||||||||||  |||| ||| | || || ||||| |||||||||||
Sbjct: 491 gatattgacccaaataataagtgcacgacccaagatgcagaatggcatagttccaaatgg 550

                                                                       
Query: 301 agaggcttcaaattcaaagagcaagcttacatcaattcatgatgtgttaaagggcttggt 360
           ||||||||||||||||||||||||||| ||||| | ||| ||||||||||  || |||||
Sbjct: 551 agaggcttcaaattcaaagagcaagctaacatctactcaagatgtgttaagaggtttggt 610

                                                                       
Query: 361 tgattggctctgttctcagctcaggaaccccacccacccgaactgntctattcctactgc 420
           ||||||||||||||||||||| ||||| || |||||||| ||||| ||| ||||||||||
Sbjct: 611 tgattggctctgttctcagctgaggaatcctacccacccaaactgttctgttcctactgc 670

             
Query: 421 ta 422
           ||
Sbjct: 671 ta 672



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>dbj|AK067714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120K21, full
           insert sequence
          Length = 1764

 Score =  391 bits (197), Expect = e-105
 Identities = 363/422 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtccgttgcttgatgaggatggaccatcgtatgttcatgnnnnnnngaatatcttgcg 60
           |||||| ||||||||||||||||| ||||| |||||||  |       ||||||||||||
Sbjct: 252 aggtcctttgcttgatgaggatgggccatcctatgttcgagtgttcctgaatatcttgcg 311

                                                                       
Query: 61  aagcatctctaaggaagagaccgnggaatatgtgcttgccctcattgatgagatgcttgc 120
            | |||||| |||||||| || |  ||||||||||||||||| |||||||||||||||||
Sbjct: 312 gaacatctccaaggaagatactgttgaatatgtgcttgccctgattgatgagatgcttgc 371

                                                                       
Query: 121 agcgaatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacattta 180
           ||  ||||||||||||||||||||||| || || || |||||||||||||||||||| ||
Sbjct: 372 agtaaatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatcta 431

                                                                       
Query: 181 cgatcctttcctaagactgctcttgaaaggtnactggttcgtacaggaaaagagctgtaa 240
           ||| |||||||||||| |||||||||||||| ||||||| || || ||||| || |||||
Sbjct: 432 cgaccctttcctaagattgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaa 491

                                                                       
Query: 241 gatattgactcacttaataagtgcgagacctaagcttcanaacggcatggttccaaatgg 300
           ||||||||| ||  ||||||||||  |||| ||| | || || ||||| |||||||||||
Sbjct: 492 gatattgacccaaataataagtgcacgacccaagatgcagaatggcatagttccaaatgg 551

                                                                       
Query: 301 agaggcttcaaattcaaagagcaagcttacatcaattcatgatgtgttaaagggcttggt 360
           ||||||||||||||||||||||||||| ||||| | ||| ||||||||||  || |||||
Sbjct: 552 agaggcttcaaattcaaagagcaagctaacatctactcaagatgtgttaagaggtttggt 611

                                                                       
Query: 361 tgattggctctgttctcagctcaggaaccccacccacccgaactgntctattcctactgc 420
           ||||||||||||||||||||| ||||| || |||||||| ||||| ||| ||||||||||
Sbjct: 612 tgattggctctgttctcagctgaggaatcctacccacccaaactgttctgttcctactgc 671

             
Query: 421 ta 422
           ||
Sbjct: 672 ta 673



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>gb|AY108648.1| Zea mays PCO090155 mRNA sequence
          Length = 1795

 Score =  246 bits (124), Expect = 5e-62
 Identities = 315/380 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  gaatatcttgcgaagcatctctaaggaagagaccgnggaatatgtgcttgccctcattga 108
           ||||||| || | |||||||| ||||||||||| |  ||||| |||||||||||||||||
Sbjct: 331 gaatatcctgtggagcatctccaaggaagagactgttgaatacgtgcttgccctcattga 390

                                                                       
Query: 109 tgagatgcttgcagcgaatcctaaacgagcagcactgttttacgacaaatctctctctgg 168
           ||| ||||||||  | ||||||||||| |||||||||||||||||  ||||||| |||||
Sbjct: 391 tgaaatgcttgcgacaaatcctaaacgtgcagcactgttttacgatcaatctctgtctgg 450

                                                                       
Query: 169 tgaagacatttacgatcctttcctaagactgctcttgaaaggtnactggttcgtacagga 228
           |||||| ||||| || |||||| ||||  || | | ||||||  ||||||| ||||| ||
Sbjct: 451 tgaagatatttatgagcctttcttaaggttgttatggaaaggcaactggtttgtacaaga 510

                                                                       
Query: 229 aaagagctgtaagatattgactcacttaataagtgcgagacctaagcttcanaacggcat 288
           ||| || |||||||||||||||    |||| |||||  |||| |||||||| || |||| 
Sbjct: 511 aaaaagttgtaagatattgactgttataattagtgcacgaccaaagcttcagaatggcac 570

                                                                       
Query: 289 ggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatgatgtgtt 348
             ||||||||||||| ||||| ||||| |||||||||||||| ||||  || ||||| ||
Sbjct: 571 acttccaaatggagatgcttcgaattcgaagagcaagcttacttcaacacacgatgtatt 630

                                                                       
Query: 349 aaagggcttggttgattggctctgttctcagctcaggaaccccacccacccgaactgntc 408
            |  || |||||||||||||||||||| ||||| ||||| || || ||||||| ||| ||
Sbjct: 631 gagaggtttggttgattggctctgttcacagctgaggaatcctacacacccgagctgctc 690

                               
Query: 409 tattcctactgctacccatt 428
           |||||||||| ||| |||||
Sbjct: 691 tattcctacttctatccatt 710



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>gb|BT018553.1| Zea mays clone EL01N0439D12.d mRNA sequence
          Length = 1360

 Score =  141 bits (71), Expect = 2e-30
 Identities = 236/292 (80%)
 Strand = Plus / Plus

                                                                       
Query: 137 gcagcactgttttacgacaaatctctctctggtgaagacatttacgatcctttcctaaga 196
           |||||||||||||| ||  ||||| | || |||||||| ||||| || || ||| |||| 
Sbjct: 8   gcagcactgttttatgatcaatctttgtcgggtgaagatatttatgaaccgttcttaagg 67

                                                                       
Query: 197 ctgctcttgaaaggtnactggttcgtacaggaaaagagctgtaagatattgactcactta 256
            || | | ||||||  ||||||| ||||| ||||| || |||||||||||||||    ||
Sbjct: 68  ttgttatggaaaggcaactggtttgtacaagaaaaaagttgtaagatattgactgttata 127

                                                                       
Query: 257 ataagtgcgagacctaagcttcanaacggcatggttccaaatggagaggcttcaaattca 316
           || |||||  |||| |||||||| || ||||   ||||||||||||| ||||| ||||| 
Sbjct: 128 attagtgcacgaccgaagcttcagaatggcacacttccaaatggagatgcttcgaattcg 187

                                                                       
Query: 317 aagagcaagcttacatcaattcatgatgtgttaaagggcttggttgattggctctgttct 376
           |||||||||||||| ||||  || ||||| || |  || |||||||||||||||||||| 
Sbjct: 188 aagagcaagcttacttcaacacacgatgtattgagaggtttggttgattggctctgttca 247

                                                               
Query: 377 cagctcaggaaccccacccacccgaactgntctattcctactgctacccatt 428
           ||||| ||||| || || ||||||| ||| |||||||||||| ||| |||||
Sbjct: 248 cagctgaggaatcctacacacccgagctgctctattcctacttctatccatt 299



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Plus

                                                                            
Query: 284      ggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatgat 343
                ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| |||
Sbjct: 21765969 ggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaagat 21766028

                                                    
Query: 344      gtgttaaagggcttggttgattggctctgttctcag 379
                |||||||  || ||||||||||||||||||||||||
Sbjct: 21766029 gtgttaagaggtttggttgattggctctgttctcag 21766064



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 125      aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 184
                ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| 
Sbjct: 21765148 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 21765207

                           
Query: 185      cctttcctaag 195
                |||||||||||
Sbjct: 21765208 cctttcctaag 21765218



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 49       gaatatcttgcgaagcatctctaaggaagagaccgnggaatatgtgcttgccctcattga 108
                |||||||||||| | |||||| |||||||| || |  ||||||||||||||||| |||||
Sbjct: 21764989 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 21765048

                              
Query: 109      tgagatgcttgcag 122
                ||||||||||||||
Sbjct: 21765049 tgagatgcttgcag 21765062



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 198      tgctcttgaaaggtnactggttcgtacaggaaaagagctgtaagatattgac 249
                |||||||||||||| ||||||| || || ||||| || ||||||||||||||
Sbjct: 21765815 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 21765866



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                              
Query: 377      cagctcaggaaccccacccacccgaactgntctattcctactgcta 422
                ||||| ||||| || |||||||| ||||| ||| ||||||||||||
Sbjct: 21766163 cagctgaggaatcctacccacccaaactgttctgttcctactgcta 21766208



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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Plus

                                                                         
Query: 284   ggcatggttccaaatggagaggcttcaaattcaaagagcaagcttacatcaattcatgat 343
             ||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| |||
Sbjct: 83152 ggcatagttccaaatggagaggcttcaaattcaaagagcaagctaacatctactcaagat 83211

                                                 
Query: 344   gtgttaaagggcttggttgattggctctgttctcag 379
             |||||||  || ||||||||||||||||||||||||
Sbjct: 83212 gtgttaagaggtttggttgattggctctgttctcag 83247



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 125   aatcctaaacgagcagcactgttttacgacaaatctctctctggtgaagacatttacgat 184
             ||||||||||||||||||||||| || || || |||||||||||||||||||| ||||| 
Sbjct: 82331 aatcctaaacgagcagcactgttctatgataactctctctctggtgaagacatctacgac 82390

                        
Query: 185   cctttcctaag 195
             |||||||||||
Sbjct: 82391 cctttcctaag 82401



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 49    gaatatcttgcgaagcatctctaaggaagagaccgnggaatatgtgcttgccctcattga 108
             |||||||||||| | |||||| |||||||| || |  ||||||||||||||||| |||||
Sbjct: 82172 gaatatcttgcggaacatctccaaggaagatactgttgaatatgtgcttgccctgattga 82231

                           
Query: 109   tgagatgcttgcag 122
             ||||||||||||||
Sbjct: 82232 tgagatgcttgcag 82245



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 198   tgctcttgaaaggtnactggttcgtacaggaaaagagctgtaagatattgac 249
             |||||||||||||| ||||||| || || ||||| || ||||||||||||||
Sbjct: 82998 tgctcttgaaaggtaactggtttgtgcaagaaaaaagttgtaagatattgac 83049



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 377   cagctcaggaaccccacccacccgaactgntctattcctactgcta 422
             ||||| ||||| || |||||||| ||||| ||| ||||||||||||
Sbjct: 83346 cagctgaggaatcctacccacccaaactgttctgttcctactgcta 83391



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>emb|AJ438592.1|MCR438592 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
           subunit H (vha-H gene)
          Length = 1735

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 179 tacgatcctttcctaagactgctcttgaaaggtnactggttcgtacaggaaaagagctgt 238
           ||||| |||||  ||||| |||||| ||||||  |||||||| |||| || |||||||||
Sbjct: 447 tacgaaccttttataagattgctctggaaaggcaactggttcatacaagagaagagctgt 506

                 
Query: 239 aagata 244
           ||||||
Sbjct: 507 aagata 512



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>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 301   agaggcttcaaattcaaagagcaag 325
             |||||||| ||||||||||||||||
Sbjct: 89313 agaggctttaaattcaaagagcaag 89337



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>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete
            sequence
          Length = 206798

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 301  agaggcttcaaattcaaagagcaag 325
            |||||||| ||||||||||||||||
Sbjct: 2195 agaggctttaaattcaaagagcaag 2171



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>gb|AC125076.4| Mus musculus BAC clone RP23-472F9 from chromosome 2, complete sequence
          Length = 165496

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 256   aataagtgcgagacctaagcttca 279
             |||||||| |||||||||||||||
Sbjct: 58995 aataagtgtgagacctaagcttca 58972



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>ref|XM_665604.1| Plasmodium berghei strain ANKA hypothetical protein (PB301350.00.0)
           partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 222 tacaggaaaagagctgtaagatat 245
           ||||||||||||||||||| ||||
Sbjct: 58  tacaggaaaagagctgtaaaatat 81



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>gb|AC134858.6| Mus musculus BAC clone RP23-361A18 from chromosome 7, complete sequence
          Length = 214282

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 368   ctctgttctcagctcaggaaccccaccc 395
             |||||||| || ||||||||||||||||
Sbjct: 16112 ctctgttcacatctcaggaaccccaccc 16085



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>emb|AL732587.8| Mouse DNA sequence from clone RP23-268K22 on chromosome 11 Contains the
              3' end of the Galnt9 gene for
              UDP-N-acetyl-alpha-D-galactosamine: polypeptide
              N-acetylgalactosaminyltransferase 9, a novel gene, a novel
              gene (2310079P12Rik), the  Hand1 gene for heart and neural
              crest derivatives expressed transcript 1 (eHAND, Thing1), a
              mitochondrial ribosomal protein S16 pseudogene (Mrps16) and
              two CpG islands, complete sequence
          Length = 132671

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    ctcaggaaccccacccaccc 399
              ||||||||||||||||||||
Sbjct: 100549 ctcaggaaccccacccaccc 100568



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>emb|AJ328099.1|HSA328099 Homo sapiens genomic sequence surrounding NotI site, clone
           NL4-DB23RS
          Length = 752

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 213 actggttcgtacaggaaaag 232
           ||||||||||||||||||||
Sbjct: 333 actggttcgtacaggaaaag 352



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>emb|AL845453.6| Mouse DNA sequence from clone RP23-296G5 on chromosome 2, complete
             sequence
          Length = 159565

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   aataagtgcgagacctaagcttca 279
             |||||||| |||||||||||||||
Sbjct: 32338 aataagtgtgagacctaagcttca 32361



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>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
              sequence
          Length = 205436

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    tcctttcctaagactgctct 203
              ||||||||||||||||||||
Sbjct: 142637 tcctttcctaagactgctct 142618



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>dbj|AB032402.1| Mus musculus BSP gene for brain serine protease, complete cds
          Length = 9182

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 368  ctctgttctcagctcaggaaccccaccc 395
            |||||||| || ||||||||||||||||
Sbjct: 3219 ctctgttcacatctcaggaaccccaccc 3192


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,245,901
Number of Sequences: 3902068
Number of extensions: 3245901
Number of successful extensions: 50217
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50157
Number of HSP's gapped (non-prelim): 55
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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