| Clone Name | bags6d17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, co... | 42 | 0.17 | 2 | gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, co... | 42 | 0.17 | 3 | gb|AC079354.4| Homo sapiens BAC clone RP11-1145F21 from 2, compl... | 38 | 2.7 | 4 | gb|AC069148.6| Homo sapiens BAC clone RP11-107N15 from 2, comple... | 38 | 2.7 |
|---|
>gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, complete sequence Length = 196086 Score = 42.1 bits (21), Expect = 0.17 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 gaggagcattggagttatctaagct 34 |||||||| |||||||||||||||| Sbjct: 42020 gaggagcagtggagttatctaagct 41996
>gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, complete sequence Length = 208435 Score = 42.1 bits (21), Expect = 0.17 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 gaggagcattggagttatctaagct 34 |||||||| |||||||||||||||| Sbjct: 204673 gaggagcagtggagttatctaagct 204649
>gb|AC079354.4| Homo sapiens BAC clone RP11-1145F21 from 2, complete sequence Length = 162554 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 gtatgagagattcactggg 68 ||||||||||||||||||| Sbjct: 1457 gtatgagagattcactggg 1439
>gb|AC069148.6| Homo sapiens BAC clone RP11-107N15 from 2, complete sequence Length = 71173 Score = 38.2 bits (19), Expect = 2.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 gtatgagagattcactggg 68 ||||||||||||||||||| Sbjct: 70630 gtatgagagattcactggg 70612 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 491,907 Number of Sequences: 3902068 Number of extensions: 491907 Number of successful extensions: 23577 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 23573 Number of HSP's gapped (non-prelim): 4 length of query: 69 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 48 effective length of database: 17,151,101,840 effective search space: 823252888320 effective search space used: 823252888320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)