ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5o03 |
|---|---|
| Clone Library Name | barley_pub |
>SPFH2_PONPY (Q5R7C5) SPFH domain-containing protein 2 precursor| Length = 339 Score = 238 bits (607), Expect = 8e-63 Identities = 111/180 (61%), Positives = 143/180 (79%) Frame = +3 Query: 3 SWFXLSSSSILHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVK 182 S+F S S +H++ EGH+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK Sbjct: 13 SFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVK 72 Query: 183 GIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHS 362 +PCGT GGVMI FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+ Sbjct: 73 NVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHT 132 Query: 363 LQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 LQ+VYI++FDQIDE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 133 LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH2_HUMAN (O94905) SPFH domain-containing protein 2 precursor| Length = 339 Score = 238 bits (607), Expect = 8e-63 Identities = 111/180 (61%), Positives = 143/180 (79%) Frame = +3 Query: 3 SWFXLSSSSILHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVK 182 S+F S S +H++ EGH+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK Sbjct: 13 SFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVK 72 Query: 183 GIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHS 362 +PCGT GGVMI FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+ Sbjct: 73 NVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHT 132 Query: 363 LQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 LQ+VYI++FDQIDE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 133 LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH2_MOUSE (Q8BFZ9) SPFH domain-containing protein 2 precursor| Length = 340 Score = 238 bits (607), Expect = 8e-63 Identities = 111/180 (61%), Positives = 143/180 (79%) Frame = +3 Query: 3 SWFXLSSSSILHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVK 182 S+F S S +H++ EGH+GVY+RGGALL + + PG+HL LPFIT ++ +Q TLQTD+VK Sbjct: 13 SFFCASLFSAVHKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVK 72 Query: 183 GIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHS 362 +PCGT GGVMI FD+IEVVN L + VYD + NY YDK I++KIHHE+NQFCS H+ Sbjct: 73 NVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHT 132 Query: 363 LQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 LQ+VYI++FDQIDE +K A+Q+D T APG+ I +VRVTKPNIP +IRRN+ELME E+TK Sbjct: 133 LQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTK 192
>SPFH1_MOUSE (Q91X78) SPFH domain-containing protein 1 precursor (KE04 protein| homolog) Length = 346 Score = 230 bits (586), Expect = 2e-60 Identities = 106/170 (62%), Positives = 135/170 (79%) Frame = +3 Query: 33 LHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGV 212 +H++ EGH+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGV Sbjct: 23 IHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGV 82 Query: 213 MISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFD 392 MI D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FD Sbjct: 83 MIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFD 142 Query: 393 QIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 QIDE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 143 QIDENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>SPFH1_PONPY (Q5RCJ9) SPFH domain-containing protein 1 precursor| Length = 346 Score = 229 bits (585), Expect = 3e-60 Identities = 106/170 (62%), Positives = 135/170 (79%) Frame = +3 Query: 33 LHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGV 212 +H++ EGH+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGV Sbjct: 23 IHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGV 82 Query: 213 MISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFD 392 MI D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FD Sbjct: 83 MIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFD 142 Query: 393 QIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 QIDE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 143 QIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>SPFH1_HUMAN (O75477) SPFH domain-containing protein 1 precursor (Protein KE04)| Length = 346 Score = 229 bits (585), Expect = 3e-60 Identities = 106/170 (62%), Positives = 135/170 (79%) Frame = +3 Query: 33 LHQVPEGHVGVYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGV 212 +H++ EGH+ VY+RGGALL + + PGYH+ LPFIT F +Q TLQTD+VK +PCGT GGV Sbjct: 23 IHKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGV 82 Query: 213 MISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQVYIDMFD 392 MI D+IEVVN L V+D + NY YDKT I++KIHHE+NQFCSAH+LQ+VYI++FD Sbjct: 83 MIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFD 142 Query: 393 QIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTK 542 QIDE +K+A+Q+D APG+ I +VRVTKP IP +IRRNFELME E+TK Sbjct: 143 QIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTK 192
>HFLC_BUCBP (Q89A40) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 33.9 bits (76), Expect = 0.31 Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 21/148 (14%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTK 203 + EG G+ R G + + PG H+KLPFI + +QT Sbjct: 23 IKEGQRGIILRFGKISYDDNHHVLVYKPGLHIKLPFIESVKIFNSKIQT----------- 71 Query: 204 GGVMISFDKIEVVNRLNKDFVYDTLLNY---------------GVHYDKTWIYDKIHHEI 338 I V+ + NK+ V +T +N+ ++Y +T I K ++ + Sbjct: 72 ----IDNRLDSVLTKDNKNLVLNTYINWKINDFCRYYLSTGEDNIYYAETLIKQKFNNRL 127 Query: 339 NQFCSAHSLQQVYIDMFDQIDETMKEAI 422 S +++++ ++ DQ+ +K ++ Sbjct: 128 RAQISHLNIKEIIFNVKDQLTSNIKYSL 155
>HFLC_BUCAP (Q8K915) Protein hflC (EC 3.4.-.-)| Length = 307 Score = 33.5 bits (75), Expect = 0.40 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 30/197 (15%) Frame = +3 Query: 3 SWFXLSSSSILHQVPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQV-- 158 S+F L SS V EG G+ + G +L+ + TPG H K+PF FE +++ Sbjct: 10 SFFLLIFSSSFFIVKEGERGIILQFGKVLRNNKQKTLVYTPGLHFKIPF---FENVKILD 66 Query: 159 ----TLQTDQVKGIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLNYGVHYDKTWIY--- 317 T+ + + K ++ S+ K + DF L G + + + Sbjct: 67 SRIHTMDNQADRFVTKEKKDLIVDSYIKWRI-----SDFSRYYLATGGGDFFQAEVLLKR 121 Query: 318 ---DKIHHEINQFCSAHSLQQVYID-----MFDQIDETMKEAIQRDCTRY-------APG 452 D++ EI + +++++ D D + K I D T A G Sbjct: 122 KFSDRLRSEIGRL----NVKEIVTDSRGRLTTDVLYSLNKGTINLDSTSLINVNSMNALG 177 Query: 453 IEIISVRVTKPNIPVSI 503 IE++ VR+ + N+P+ + Sbjct: 178 IEVVDVRIKQINLPLEV 194
>FOLB_METEX (P71513) Dihydroneopterin aldolase (EC 4.1.2.25) (DHNA)| Length = 130 Score = 32.7 bits (73), Expect = 0.68 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 402 ETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELMEEERTKA 545 E + EAI C P IE I+VR+ KP+ P+ ++ +E R ++ Sbjct: 74 EALAEAIAETCLARFPRIETIAVRIDKPSAPIPAVLDYAAIEIVRGRS 121
>HFLC_HAEIN (P44545) Protein hflC (EC 3.4.-.-)| Length = 295 Score = 32.3 bits (72), Expect = 0.89 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 12/156 (7%) Frame = +3 Query: 105 PGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMISFDKIEVVNRLNKDFVYDTLLN 284 PG H K+P I + + ++T G F +E + L +V + + Sbjct: 50 PGLHFKVPLIDSIKVLDARIRT----------LDGSATRFVTVEKKDLLVDSYVKWKISD 99 Query: 285 YGVHYDKTWIYD----------KIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDC 434 +G Y T D K++ + + +++ + ++ E K+A+ Sbjct: 100 FGRFYTSTGGGDYAQAANLLSRKVNDRLRSEIGSRTIKDIVSGTRGELMEGAKKALSSGQ 159 Query: 435 TRYAP-GIEIISVRVTKPNIPVSIRRN-FELMEEER 536 A GIE+I VRV + N+P + + ++ M ER Sbjct: 160 DSTAELGIEVIDVRVKQINLPDEVSSSIYQRMRAER 195
>CLOT_PENMO (Q9U572) Hemolymph clottable protein precursor| Length = 1670 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Frame = +3 Query: 363 LQQVYIDMFDQIDETMKEAIQRDC--TRYAPGIEIIS 467 L + D+ + E +KEAI++ C + YAPGI+II+ Sbjct: 1242 LLEASFDVSSNVKERVKEAIEKGCDYSTYAPGIDIIT 1278
>HFLC_VIBPA (P40606) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 31.6 bits (70), Expect = 1.5 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +3 Query: 33 LHQVPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 L +PEG G+ R G +LK I PG H K+P + + + +QT Sbjct: 20 LFVIPEGERGIVVRFGRVLKDNNDITRIYEPGLHFKMPLFDRVKQLDARIQT 71
>HFLC_VIBCH (Q9KV08) Protein hflC (EC 3.4.-.-)| Length = 326 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 +PEG G+ R G +LK I PG H K+P + + + +QT Sbjct: 23 IPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLFDRVKTLDARIQT 71
>KUP1_RALSO (Q8XR16) Probable potassium transport system protein kup 1| Length = 613 Score = 30.8 bits (68), Expect = 2.6 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 12/99 (12%) Frame = -2 Query: 476 NTNTDNLNSRSIARAVPLDSFFHGLIN----LIEHVNVNL---LQTMSTAELVYLMMNFV 318 +T T L +R++ +PL+ F GL++ ++ V L ++ + A L L N V Sbjct: 431 HTGTQLLKARNVEGGIPLEPFMEGLLSHPPYRVDGTAVYLTPSIEFVPLALLHNLKHNHV 490 Query: 317 IYPCLIIMH----TIIE*GVINKVFIKTI-DNLYLVKAD 216 ++ ++ +H + ++ +KTI DNLY V AD Sbjct: 491 LHSRVLFIHFRTQAVPYVEPAKRLVVKTIGDNLYAVAAD 529
>RPOB2_METVA (P41558) DNA-directed RNA polymerase subunit B'' (EC 2.7.7.6)| Length = 499 Score = 30.4 bits (67), Expect = 3.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 171 DQVKGIPCGTKGGVMISFDKIEVVNRLNKD 260 D+V G+ KGG +SF K+ V +NK+ Sbjct: 37 DEVTGVETEIKGGYKVSFGKVRVTKPINKE 66
>DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111, chloroplast| precursor Length = 387 Score = 30.4 bits (67), Expect = 3.4 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Frame = +3 Query: 393 QIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPV--SIRRNFELME-EERTKA 545 Q+D+ +++ + +C +Y ++ +T+PN PV ++R + EE TKA Sbjct: 295 QVDDELEDEVGGECGKYGTVTRVLIFEITEPNFPVHEAVRIFVQFSRPEETTKA 348
>HFLC_SHIFL (P0ABC6) Protein hflC (EC 3.4.-.-)| Length = 334 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 V EG G+ R G +L+ + PG H K+PFI + + +QT Sbjct: 23 VKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQT 71
>HFLC_ECOLI (P0ABC3) Protein hflC (EC 3.4.-.-)| Length = 334 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 V EG G+ R G +L+ + PG H K+PFI + + +QT Sbjct: 23 VKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQT 71
>HFLC_ECOL6 (P0ABC4) Protein hflC (EC 3.4.-.-)| Length = 334 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 V EG G+ R G +L+ + PG H K+PFI + + +QT Sbjct: 23 VKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQT 71
>HFLC_ECO57 (P0ABC5) Protein hflC (EC 3.4.-.-)| Length = 334 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Frame = +3 Query: 42 VPEGHVGVYWRGGALLKT------ITTPGYHLKLPFITQFEPIQVTLQT 170 V EG G+ R G +L+ + PG H K+PFI + + +QT Sbjct: 23 VKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQT 71
>GR22F_DROME (P58954) Putative gustatory receptor 22f| Length = 378 Score = 29.6 bits (65), Expect = 5.8 Identities = 22/90 (24%), Positives = 44/90 (48%) Frame = -2 Query: 494 RYVWLCNTNTDNLNSRSIARAVPLDSFFHGLINLIEHVNVNLLQTMSTAELVYLMMNFVI 315 RYVWL N ++ + S +R L S + L+ L E L+ + +L+ +++ ++I Sbjct: 201 RYVWLVNETLEDSHHLSSSRIHALASLYDRLLKLSE-----LVVACNDLQLILMLIIYLI 255 Query: 314 YPCLIIMHTIIE*GVINKVFIKTIDNLYLV 225 + I I+ +NK +I + + L+ Sbjct: 256 GNTVQIFFLIVLGVSMNKRYIYLVASPQLI 285
>YL17_CAEEL (Q11102) Hypothetical protein C02F12.7| Length = 1130 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/62 (25%), Positives = 34/62 (54%) Frame = +3 Query: 348 CSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPVSIRRNFELME 527 C + L++ Y + ++++E+ + + +D R A IEI ++R K + IR + +E Sbjct: 498 CKLNELEEQYTSLKEELEESAR--LDKDELREASEIEIQALRTEKSILAAEIRVLTQKIE 555 Query: 528 EE 533 +E Sbjct: 556 DE 557
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 318 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 479 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACCR (Q814F7) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 318 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 479 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 318 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 479 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 28.9 bits (63), Expect = 9.9 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +3 Query: 318 DKIHHEINQFCSAHSLQQVYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVT 479 DK H+I + Q+VY+ + ++ E +QRD R PG+E + + T Sbjct: 289 DKPRHQIFLEPEGRNTQEVYVQ---GLSTSLPEDVQRDMLRTIPGLENVEMMRT 339
>NU6M_RHISA (O99827) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 149 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = -2 Query: 431 VPLDSFFHGLINLIEHVNVNLLQTMSTAELVYLMMNFVIYPCLIIMHTII 282 +P DSF + +E +N+N + +++ ++ LMM F LI+M TII Sbjct: 94 IPYDSF----MTKLEMININKIYSVNFVNMIILMMIF-----LIVMLTII 134
>RL4_TRYBB (P49669) 60S ribosomal protein L4 (L1)| Length = 374 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 13/71 (18%) Frame = +3 Query: 15 LSSSSILHQVPEGHVG--VYWRGGALLK------TITTP-----GYHLKLPFITQFEPIQ 155 ++S ++LH P GHVG + W A K T T P G+ L P +T + + Sbjct: 230 VNSLNLLHLAPGGHVGRFIIWTKSAFEKLDKIFGTFTEPSTVKSGFMLPAPMLTSTDVTR 289 Query: 156 VTLQTDQVKGI 188 + +Q+++V+ + Sbjct: 290 I-MQSEEVRRV 299 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,524,887 Number of Sequences: 219361 Number of extensions: 1684757 Number of successful extensions: 4864 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4858 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
