ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6d01 |
|---|---|
| Clone Library Name | barley_pub |
>UN84B_MOUSE (Q8BJS4) Sad1/unc-84-like protein 2| Length = 699 Score = 39.3 bits (90), Expect = 0.004 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 9/117 (7%) Frame = +2 Query: 95 LTQLKRKKGLDGTGSDITLDDVRIFAKEIVEMEIARHAADGLGMVDYALXXXXXXXXXX- 271 L Q+ +K+G+ G +T + V IV+ + R++ D +GMVDYAL Sbjct: 493 LGQILQKEGIVG----VTEEQVH----RIVKQALQRYSEDRIGMVDYALESGGASVISTR 544 Query: 272 -XXAFKKAKSILPR-------RSESHKMLEPSFGQPGECFALEGSVGFXEIRLXTGI 418 ++ ++L S+S +++ PG C+A +G GF +RL I Sbjct: 545 CSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARI 601
>UN84B_HUMAN (Q9UH99) Sad1/unc-84-like protein 2 (Rab5-interacting protein)| (Rab5IP) Length = 717 Score = 34.3 bits (77), Expect = 0.12 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Frame = +2 Query: 179 IVEMEIARHAADGLGMVDYALXXXXXXXXXX--XXAFKKAKSILPR-------RSESHKM 331 IV+ + R++ D +G+ DYAL ++ ++L S+S ++ Sbjct: 531 IVKQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRV 590 Query: 332 LEPSFGQPGECFALEGSVGFXEIRLXTGI 418 + PG C+A +G GF +RL I Sbjct: 591 ILQPDVHPGNCWAFQGPQGFAVVRLSARI 619
>BORG5_MOUSE (Q91W92) Cdc42 effector protein 1 (Binder of Rho GTPases 5)| Length = 409 Score = 34.3 bits (77), Expect = 0.12 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -1 Query: 282 KAPECLTTLPPPDPNA*STIPRPSAACLAISISTISLANILTSSKVISLPVPS 124 +AP T +P +P A + P P+A A +I+T+ L +S V SLP P+ Sbjct: 233 EAPAAETPVPTANPPAPAANPAPTAKPPAHAITTLDAVTSLPASAVTSLPAPA 285
>POLG_CXB3W (Q66282) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2184 Score = 32.3 bits (72), Expect = 0.47 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 PRR +SH +L F +PG+C + EG VGF +IR Sbjct: 941 PRRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADIR 988
>POLG_CXB3N (P03313) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2184 Score = 32.3 bits (72), Expect = 0.47 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 PRR +SH +L F +PG+C + EG VGF +IR Sbjct: 941 PRRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADIR 988
>POLG_EC12T (Q66575) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 PRR +SH +L F +PG+C + EG VGF ++R Sbjct: 949 PRRYQSHVLLAAGFSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVR 996
>POLG_EC09H (Q66849) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 15/54 (27%) Frame = +2 Query: 287 KAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 +A P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 943 QASEYYPKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 996
>PIM2_MOUSE (Q62070) Serine/threonine-protein kinase Pim-2 (EC 2.7.11.1)| Length = 370 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 264 TTLPPPDPNA*STIPRPSAACLAISISTISLANILTSSKVISLPVPSKP 118 +TL PP P + + +PR S C +S S NI ++S +++ P+ P Sbjct: 24 STLAPPSPGSPAALPRASTPC---GLSGFSGLNIRSTSSMLTKPLQGHP 69
>POLG_CXB1J (P08291) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2181 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 938 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVVGIVTMGGEGVVGFADVR 985
>POLG_CXB4J (P08292) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2182 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 939 PKRYQSHVLLATGFSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVR 986
>POLG_CXB5P (Q03053) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2184 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 941 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVR 988
>POLG_EC11G (P29813) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2194 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 951 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 998
>POLG_EC09B (Q66577) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2202 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 959 PKRYQSHVLLAAGFSEPGDCGGILRCDHGVIGLVTMGGEGVVGFADVR 1006
>POLG_CXB2O (Q9YLG5) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2186 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 943 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGVVTMGGEGVVGFADVR 990
>POLG_EC30B (Q9WN78) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2193 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 950 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVR 997
>POLG_EC01F (O91734) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2183 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 940 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 987
>POLG_CXB6S (Q9QL88) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2183 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 940 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGLVTMGGEGVVGFADVR 987
>POLG_EC05N (Q9YLJ1) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2195 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 952 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 999
>POLG_CXA9 (P21404) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome- Length = 2200 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 957 PKRYQSHVLLAAGFSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 1004
>POLG_CXB4E (Q86887) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2182 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L F +PG+C + EG VGF ++R Sbjct: 939 PKRYQSHVLLARGFSEPGDCGGILRCEHGVIGIRTMGREGVVGFADVR 986
>KIF3A_PONPY (Q5R4H3) Kinesin-like protein KIF3A (Microtubule plus end-directed| kinesin motor 3A) Length = 702 Score = 30.4 bits (67), Expect = 1.8 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Frame = +3 Query: 174 KRLWRWR*LGMQQMALEWWIMH*GLVVAKWLSIRELSRKLRAFFLVVVK-VTKCWSQVLG 350 K++W +MA + H G + +IR+LSR+LR L++ + + + +++ Sbjct: 550 KKVWTMLMAAKSEMA-DLQQEHQGEIEGLLENIRQLSRELRLQMLIIDNFIPRDYQEMI- 607 Query: 351 SQENVLHWKEVLDSWK 398 EN +HW E + W+ Sbjct: 608 --ENYVHWNEDIGEWQ 621
>POLG_SVDVH (P16604) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A) (P2-3B); Core protein P2B (P2-5B); Core protein P2C (P2-X); C Length = 2184 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P++ +SH +L F +PG+C + EG VGF ++R Sbjct: 941 PKKHQSHVLLAAGFAEPGDCGGILRCQHGVIGIVTMGGEGVVGFADVR 988
>LDHD_ECOLI (P52643) D-lactate dehydrogenase (EC 1.1.1.28) (D-LDH)| (Fermentative lactate dehydrogenase) Length = 329 Score = 30.0 bits (66), Expect = 2.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -1 Query: 222 PRPSAACLAISISTISLANILTSSKVISLPVPSKP 118 P PSAA L + + + L + + S VISL P P Sbjct: 175 PYPSAAALELGVEYVDLPTLFSESDVISLHCPLTP 209
>OLF12_MOUSE (Q60894) Olfactory receptor 12 (Odorant receptor M76)| Length = 333 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -1 Query: 204 CLAISISTISLANILTSSKVISLPVPSKPFFLFN 103 C + +I+ +LAN L++SKVIS + FF F+ Sbjct: 79 CYSSAIAPNALANFLSTSKVISFEACATQFFFFS 112
>POLG_SVDVU (P13900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A) (P2-3B); Core protein P2B (P2-5B); Core protein P2C (P2-X); C Length = 2184 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P++ +SH +L F +PG+C + EG VGF ++R Sbjct: 941 PKKYQSHVLLAAGFAEPGDCGGILRCQHGVIGIVTVGGEGVVGFADVR 988
>KIF3A_MACFA (Q4R628) Kinesin-like protein KIF3A (Microtubule plus end-directed| kinesin motor 3A) Length = 702 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 267 SIRELSRKLRAFFLVVVK-VTKCWSQVLGSQENVLHWKEVLDSWK 398 +IR+LSR+LR L++ + + + +++ EN +HW E + W+ Sbjct: 580 NIRQLSRELRLQMLIIDNFIPRDYQEMI---ENYVHWNEDIGEWQ 621
>KIF3A_HUMAN (Q9Y496) Kinesin-like protein KIF3A (Microtubule plus end-directed| kinesin motor 3A) Length = 702 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 267 SIRELSRKLRAFFLVVVK-VTKCWSQVLGSQENVLHWKEVLDSWK 398 +IR+LSR+LR L++ + + + +++ EN +HW E + W+ Sbjct: 580 NIRQLSRELRLQMLIIDNFIPRDYQEMI---ENYVHWNEDIGEWQ 621
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 F +A P R +SH ++ F +PG+C + EG V F +IR Sbjct: 960 FMEANDYYPARYQSHMLIGCGFAEPGDCGGILRCTHGVIGIITAGGEGIVAFADIR 1015
>DGKQ_HUMAN (P52824) Diacylglycerol kinase theta (EC 2.7.1.107) (Diglyceride| kinase theta) (DGK-theta) (DAG kinase theta) Length = 942 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +1 Query: 91 HSDSVEEKEGFGWHWE*YNL---GRCKNICQRDCGDGDS*ACSRWPWNG 228 H D ++ + HW NL RC+ +C++ CG D A R W G Sbjct: 172 HQDGHQDHDTHHHHWREGNLPSGARCE-VCRKTCGSSDVLAGVRCEWCG 219
>KIF3A_MOUSE (P28741) Kinesin-like protein KIF3A (Microtubule plus end-directed| kinesin motor 3A) Length = 701 Score = 29.3 bits (64), Expect = 3.9 Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 267 SIRELSRKLRAFFLVVVK-VTKCWSQVLGSQENVLHWKEVLDSWK 398 +IR+LSR+LR L++ + + + +++ EN +HW E + W+ Sbjct: 579 NIRQLSRELRLQMLIIDNFIPQDYQEMI---ENYVHWNEDIGEWQ 620
>KRA13_HUMAN (Q8IUG1) Keratin-associated protein 1-3 (Keratin-associated protein| 1.8) (Keratin-associated protein 1.9) Length = 177 Score = 28.9 bits (63), Expect = 5.2 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 238 CIIHHSKAICCMPSY 194 C +HH++A CC PSY Sbjct: 144 CQLHHAEASCCRPSY 158
>KRA11_HUMAN (Q07627) Keratin-associated protein 1-1 (Keratin-associated protein| 1.1) (High sulfur keratin-associated protein 1.1) (Keratin-associated protein 1.6) (Keratin-associated protein 1.7) Length = 177 Score = 28.9 bits (63), Expect = 5.2 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 238 CIIHHSKAICCMPSY 194 C +HH++A CC PSY Sbjct: 144 CQLHHAEASCCRPSY 158
>KRA15_HUMAN (Q9BYS1) Keratin-associated protein 1-5 (Keratin-associated protein| 1.5) (High sulfur keratin-associated protein 1.5) Length = 174 Score = 28.9 bits (63), Expect = 5.2 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 238 CIIHHSKAICCMPSY 194 C +HH++A CC PSY Sbjct: 144 CQLHHAQASCCRPSY 158
>POLG_HE71B (Q66478) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 F +A P R +SH ML +PG+C + G VGF ++R Sbjct: 944 FVEASEYYPARYQSHLMLAEGHSEPGDCGGILRCQHGVVGIVSTGGSGLVGFADVR 999
>CND3_XENLA (Q9YHB5) Condensin complex subunit 3 (Chromosome-associated protein| G) (Chromosome assembly protein xCAP-G) (Condensin subunit CAP-G) Length = 1034 Score = 28.5 bits (62), Expect = 6.7 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = +2 Query: 140 DITLDDVRIFAKEIVEMEIAR-HAADGLGMVDYALXXXXXXXXXXXXAFKKAKSILPRRS 316 D T DVRI+AK + +E++R ++ D L ++D A+ A +K +S L Sbjct: 857 DPTAPDVRIYAKALCSLELSRENSTDLLPLLDCAV--EDVTDKVCERAIEKVRSQLRSGR 914 Query: 317 ESHKM 331 E H++ Sbjct: 915 EEHRV 919
>DDX51_HUMAN (Q8N8A6) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 666 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -2 Query: 227 PFQGHLLHA*LSPSPQSLWQIFLHRPRLY 141 P Q L A L+ +P+ L Q+ LH+PRL+ Sbjct: 424 PLQKLLFSATLTQNPEKLQQLGLHQPRLF 452
>POLG_EC06C (Q66474) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2190 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 15/48 (31%) Frame = +2 Query: 305 PRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 P+R +SH +L +PG+C + EG VGF ++R Sbjct: 947 PKRYQSHVLLAAGLSEPGDCGGILRCEHGVIGIVTMGGEGVVGFADVR 994
>POLG_CX16T (Q9QF31) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 F +A P R +SH ML +PG+C + G VGF ++R Sbjct: 944 FVEASEYYPARYQSHLMLAVGHSEPGDCGGILRCQHGVVGIVSTGGNGLVGFADVR 999
>POLG_CX16G (Q65900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 F +A P R +SH ML +PG+C + G VGF ++R Sbjct: 944 FVEASEYYPARYQSHLMLAVGHSEPGDCGGILRCQHGVVGIVSTGGNGLVGFADVR 999
>IF2_CHLMU (Q9PKU0) Translation initiation factor IF-2| Length = 896 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/51 (27%), Positives = 20/51 (39%) Frame = -3 Query: 418 NSCXEPDFXESNTSFQCKTFSWLPKTWLQHFVTFTTTRKNALSFLESSRML 266 N C +P+F E Q + LP+ W T T+ K + ML Sbjct: 510 NKCDKPNFNEETVYRQLAELNLLPEAWGGSIATINTSAKTGEGLQDLLEML 560
>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 + +A + P R +SH ++ F PG+C + EG V F +IR Sbjct: 962 YMEANNYYPARYQSHMLIGHGFASPGDCGGILRCHHGVIGIITAGGEGLVAFTDIR 1017
>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 15/56 (26%) Frame = +2 Query: 281 FKKAKSILPRRSESHKMLEPSFGQPGECFAL---------------EGSVGFXEIR 403 + +A + P R +SH ++ F PG+C + EG V F +IR Sbjct: 962 YMEANNYYPARYQSHMLIGHGFASPGDCGGILRCHHGVIGIITAGGEGLVAFSDIR 1017
>IF2_CHLPN (Q9Z8M1) Translation initiation factor IF-2| Length = 890 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/51 (29%), Positives = 20/51 (39%) Frame = -3 Query: 418 NSCXEPDFXESNTSFQCKTFSWLPKTWLQHFVTFTTTRKNALSFLESSRML 266 N C +P+F Q + LP+ W VT T+ K E ML Sbjct: 504 NKCDKPNFNSETIYRQLSEINLLPEAWGGSTVTVNTSAKTGEGLSELLEML 554
>IF2_CHLAB (Q5L627) Translation initiation factor IF-2| Length = 874 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/51 (29%), Positives = 20/51 (39%) Frame = -3 Query: 418 NSCXEPDFXESNTSFQCKTFSWLPKTWLQHFVTFTTTRKNALSFLESSRML 266 N C +P+F Q + LP+ W VT T+ K E ML Sbjct: 489 NKCDKPNFNADTVYRQLSEINLLPEAWGGTTVTINTSAKTGEGLSELLEML 539
>THNX_HORVU (Q8H0Q5) Probable leaf thionin precursor [Contains: Probable leaf| thionin; Acidic protein] Length = 137 Score = 28.1 bits (61), Expect = 8.8 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 142 YNLGRCKNICQRDCGDGD 195 +++G C N C R C DGD Sbjct: 113 FDMGLCSNACARFCNDGD 130
>MDTH_BLOFL (Q7VQX5) Multidrug resistance protein mdtH| Length = 401 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 193 LHLHNLFGKYSYIVQGYITPSAIQTLLSLQLSQNAHRIXFLETKPM 56 + +H + G+ SYI YIT + + LL + ++ + LET+ M Sbjct: 234 IRMHEISGQLSYIKYIYITEAILSLLLIIPITYWMEKYFKLETRLM 279
>COX1_THET8 (Q5SJ79) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) (Cytochrome c ba(3) subunit I) (Cytochrome cba3 subunit 1) Length = 562 Score = 28.1 bits (61), Expect = 8.8 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = +3 Query: 165 YLPKRLWRWR*LGMQQMALEWWIMH*GLVVAKWLSIRELSRKLRAFFLVVVKVTKCWSQV 344 YLP R R M M L WW+ GLVVA ++ L+ + + + W+ Sbjct: 91 YLPARELNMR-PNMGLMWLSWWMAFIGLVVA---ALPLLANEATVLYTFYPPLKGHWAFY 146 Query: 345 LGSQENVLH-WKE---VLDSWK 398 LG+ VL W VLD W+ Sbjct: 147 LGASVFVLSTWVSIYIVLDLWR 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,037,775 Number of Sequences: 219361 Number of extensions: 1229356 Number of successful extensions: 3080 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3012 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3077 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
