ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5n23 |
|---|---|
| Clone Library Name | barley_pub |
>YEQ8_YEAST (P40051) Hypothetical 58.0 kDa peptidase in PTP3-ILV1 intergenic| region (EC 3.4.-.-) Length = 511 Score = 89.0 bits (219), Expect = 1e-17 Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 7/165 (4%) Frame = +2 Query: 164 IDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIV 343 I+ GQP + P L+ E+TPGI++ EY RR +L + LP KS I+A D Q + V Sbjct: 42 IEAGQPLHETRPFLIKSGELTPGISALEYYERRIRLAETLPPKSCVILAGNDIQFASGAV 101 Query: 344 PYSFRQNGDYLYITGCTQPGGVAVLSK------ETGLCMFMPDKHKEDVVWEGPTAGVEX 505 Y F+Q D Y++G +P V +L K +T M +P K WEG +GV Sbjct: 102 FYPFQQENDLFYLSGWNEPNSVMILEKPTDSLSDTIFHMLVPPKDAFAEKWEGFRSGVYG 161 Query: 506 XXXXXXXXXXXPLSEMKKILPEMIEQSKVVYHN-VKASTSSYRNF 637 ++++ K LP++I ++ +Y + + S S NF Sbjct: 162 VQEIFNADESASINDLSKYLPKIINRNDFIYFDMLSTSNPSSSNF 206
>YDE5_SCHPO (Q10439) Probable peptidase C12B10.05 (EC 3.4.-.-)| Length = 486 Score = 72.0 bits (175), Expect = 1e-12 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 5/124 (4%) Frame = +2 Query: 140 VAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAIIASAD 319 V+Y + GQ T +HP +L E+TP I+++EY RR ++ L D I+ SA Sbjct: 31 VSYLNKSALRCGQATDSTHPHILQPGELTPRISAQEYKTRRDRVASLLEDNDFMIVTSAP 90 Query: 320 QQMMTDIVPYSFRQNGDYLYITGCTQPGGVAVLSKETG-----LCMFMPDKHKEDVVWEG 484 + M Y + Q+ ++ Y+TGC +P V ++ K +++P K+ WEG Sbjct: 91 VRHMCGAAFYEYHQDPNFYYLTGCLEPNAVLLMFKNGASGSYDCSLYLPSKNPYIEKWEG 150 Query: 485 PTAG 496 G Sbjct: 151 LRTG 154
>AMPP_ECOLI (P15034) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 440 Score = 48.5 bits (114), Expect = 2e-05 Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 4/127 (3%) Frame = +2 Query: 233 ITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 412 I+ +E+ RR+ L++ + S A+I +A + + Y +RQN D+ Y TG +P V Sbjct: 3 ISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVL 62 Query: 413 VLSKETGL----CMFMPDKHKEDVVWEGPTAGVEXXXXXXXXXXXXPLSEMKKILPEMIE 580 VL K +F + +W G G + SE+ + L +++ Sbjct: 63 VLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLN 122 Query: 581 QSKVVYH 601 VVYH Sbjct: 123 GLDVVYH 129
>AMPP_HAEIN (P44881) Xaa-Pro aminopeptidase (EC 3.4.11.9) (X-Pro| aminopeptidase) (Aminopeptidase P II) (APP-II) (Aminoacylproline aminopeptidase) Length = 430 Score = 44.7 bits (104), Expect = 3e-04 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 3/126 (2%) Frame = +2 Query: 233 ITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 412 + EE+ RR ++ + S ++ S ++ + Y FRQ+ + Y+TG +P Sbjct: 9 LPKEEFEERRTRVFAQMQPNSALLLFSEIEKRRNNDCTYPFRQDSYFWYLTGFNEPNAAL 68 Query: 413 VLSKETGL---CMFMPDKHKEDVVWEGPTAGVEXXXXXXXXXXXXPLSEMKKILPEMIEQ 583 +L K + +F+ + W G GVE + E +LP++++ Sbjct: 69 LLLKTEQVEKAIIFLRPRDPLLETWNGRRLGVERAPQQLNVNEAYSIEEFATVLPKILKN 128 Query: 584 SKVVYH 601 +YH Sbjct: 129 LTALYH 134
>YFH6_YEAST (P43590) Hypothetical 61.8 kDa peptidase in MPR1-GCN20 intergenic| region (EC 3.4.-.-) Length = 535 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +2 Query: 353 FRQNGDYLYITGCTQPGGVAVLSKETG-LCMFMPDKHKEDVVWEGPTAGVEXXXXXXXXX 529 FRQN + +++G P + + T L +F+P+ +EDV+W G ++ Sbjct: 118 FRQNRYFYHLSGVDIPASAILFNCSTDKLTLFLPNIDEEDVIWSGMPLSLDEAMRVFDID 177 Query: 530 XXXPLSEMKKILPEM 574 +S++ K E+ Sbjct: 178 EALYISDLGKKFKEL 192
>AMPP1_STRLI (P0A3Z2) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = +2 Query: 218 EITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQ 397 ++ P + E RR L P + L +I + + + ++ YSFR + +Y Y+TG Sbjct: 52 DLEPIAQAAETAARRAALSARFPGERL-VIPAGNLKTRSNDTEYSFRASVEYAYLTGNQT 110 Query: 398 PGGVAVLSKE 427 GV V+ E Sbjct: 111 EDGVLVMEPE 120
>AMPP1_STRCO (P0A3Z1) Xaa-Pro aminopeptidase 1 (EC 3.4.11.9) (Xaa-Pro| aminopeptidase I) (X-Pro aminopeptidase I) (Aminopeptidase P I) (APP) (PEPP I) (Aminoacylproline aminopeptidase I) Length = 490 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/70 (28%), Positives = 34/70 (48%) Frame = +2 Query: 218 EITPGITSEEYICRRKKLLDALPDKSLAIIASADQQMMTDIVPYSFRQNGDYLYITGCTQ 397 ++ P + E RR L P + L +I + + + ++ YSFR + +Y Y+TG Sbjct: 52 DLEPIAQAAETAARRAALSARFPGERL-VIPAGNLKTRSNDTEYSFRASVEYAYLTGNQT 110 Query: 398 PGGVAVLSKE 427 GV V+ E Sbjct: 111 EDGVLVMEPE 120
>SRG6_CAEEL (P54128) Serpentine receptor class gamma-6 (Protein srg-6)| Length = 311 Score = 32.0 bits (71), Expect = 1.7 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +3 Query: 156 EE*LMLASQHPDLIPSY*LMRRLHQASQV--RSTYVEEKSFWMLY 284 EE L L Q LIPS+ L+ ++ QV R Y E++ FW+LY Sbjct: 18 EENLKLMGQLVYLIPSFILISKMIYVIQVKHRGDYHEQRRFWLLY 62
>RPOB_THETN (Q8R7U6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1234 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/83 (32%), Positives = 39/83 (46%) Frame = +2 Query: 128 IIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEEYICRRKKLLDALPDKSLAII 307 IIR A G I VG+ TP+ EL A+E + I E+ + D SL + Sbjct: 841 IIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEK--------AREVRDTSLR-V 891 Query: 308 ASADQQMMTDIVPYSFRQNGDYL 376 + ++ D+ YS R+NGD L Sbjct: 892 PHGESGIVVDVKVYS-RENGDEL 913
>RPOB_OCEIH (Q8ETY8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1179 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = +2 Query: 122 HSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE 247 H IIR A T G I VG+ TP+ EL A+E + I E+ Sbjct: 830 HGIIRVGAEVTDGDILVGKVTPKGVTELSAEERLLHAIFGEK 871
>PEPD_HUMAN (P12955) Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase)| (Proline dipeptidase) (Prolidase) (Imidodipeptidase) Length = 492 Score = 30.4 bits (67), Expect = 5.0 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 6/148 (4%) Frame = +2 Query: 239 SEEYICRRKKLLDALPDKSLAIIASAD--QQMMTDIVPYSFRQNGDYLYITGCTQPGGVA 412 + + +C R + A+ S+ ++ + Q+ TD FRQ + + G T+PG Sbjct: 25 NRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTD-TGVLFRQESFFHWAFGVTEPGCYG 83 Query: 413 VLSKETG-LCMFMPDKHKEDVVWEGPTAGVEXXXXXXXXXXXXPLSEMKKILPEMIEQSK 589 V+ +TG +F+P W G E + E+ +L Sbjct: 84 VIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIASVLTSQKPSVL 143 Query: 590 VVYHNVKASTSSY---RNFDAFRRASLN 664 + V + S +FD + +N Sbjct: 144 LTLRGVNTDSGSVCREASFDGISKFEVN 171
>SKO1_YEAST (Q02100) CRE-binding bZIP protein SKO1| Length = 647 Score = 30.4 bits (67), Expect = 5.0 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = -3 Query: 228 GVISSSANNSG*DLGVGWPTSIIPPVVYATRLIIL*EVDNKRDAPSLARSVL 73 G+I SS++NS ++ V P+S PP +T LI L E R S A SVL Sbjct: 480 GIIPSSSSNSQFNVNVSTPSSSSPP---STSLIALLESSISRSDYSSAMSVL 528
>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)| Length = 961 Score = 29.6 bits (65), Expect = 8.5 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +2 Query: 104 RLLSTSHSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE------YICRRK 265 RLL +I+ + I ++G P +HPE + + +TP S E ++ Sbjct: 591 RLLGRLARLIKEAVWEK--IKEIGDRQPENHPEGVPEVPLTPEAVSVELRPLILWMANTT 648 Query: 266 KLLDALPDKSLAIIASADQQ 325 +LL + +K L + ADQ+ Sbjct: 649 ELLSFVQEKVLEMEKEADQE 668
>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)| Length = 963 Score = 29.6 bits (65), Expect = 8.5 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%) Frame = +2 Query: 104 RLLSTSHSIIRRVAYTTGGIIDVGQPTPRSHPELLADEEITPGITSEE------YICRRK 265 RLL +I+ + I ++G P +HPE + + +TP S E ++ Sbjct: 597 RLLGRLARLIKEAVWEK--IKEIGDRQPENHPEGVPEVPLTPEAVSVELRPLMLWMANTT 654 Query: 266 KLLDALPDKSLAIIASADQQ 325 +LL + +K L + ADQ+ Sbjct: 655 ELLSFVQEKVLEMEKEADQE 674
>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide| 1,2-alpha-mannosidase (EC 3.2.1.113) (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific-processing alpha-mannosidase) Length = 699 Score = 29.6 bits (65), Expect = 8.5 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 75 GRCEQARGRLACYLPLTV*LGVLHTLPEE*LMLASQ 182 GR L C+LP T+ LGV H LP + LA + Sbjct: 516 GRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQE 551 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,786,257 Number of Sequences: 219361 Number of extensions: 1799359 Number of successful extensions: 4139 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4137 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
