>UACA_CANFA (Q9GL21) Uveal autoantigen with coiled-coil domains and ankyrin|
           repeats protein
          Length = 1415

 Score = 33.5 bits (75), Expect = 0.47
 Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
 Frame = +1

Query: 115 ALISAPTDTKLE-MGETEGMKENMLSEIQRRKHEGTTSETQSAT-------ETVRAEIYS 270
           +L+S+  + K++ +GETE   E  L+EI++ + E    + + A        E +++ +  
Sbjct: 636 SLLSSEVNEKVKKIGETEREYEKSLTEIRQLRRELENCKAKLAQHVKPEEHEQLKSRLEQ 695

Query: 271 LLNLISKKVTELKAEPKPRISDEVQIHMDN--IYREVTNL 384
               ++KKVTEL ++ +    D  ++++DN  + ++V NL
Sbjct: 696 RAGELAKKVTELTSKNQVLQRDVEKVYLDNKLLNQQVHNL 735

>PARB_NEIMB (Q9JXP5) Probable chromosome partitioning protein parB|
          Length = 286

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 103 GHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNL 282
           GHA AL++ P   +LE+ +        + E++RR      ++     +T  A+I  L +L
Sbjct: 183 GHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQAALQNKRPEPKKTAAADIGRLNDL 242

Query: 283 ISKKV 297
           +++K+
Sbjct: 243 LTEKL 247

>PARB_NEIMA (Q9JW77) Probable chromosome partitioning protein parB|
          Length = 286

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 103 GHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNL 282
           GHA AL++ P   +LE+ +        + E++RR      ++     +T  A+I  L +L
Sbjct: 183 GHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQAALQNKRPEPKKTAAADIGRLNDL 242

Query: 283 ISKKV 297
           +++K+
Sbjct: 243 LTEKL 247

>NCA1_YEAST (P32493) Nuclear control of ATPase messenger RNA expression|
           protein, mitochondrial precursor
          Length = 518

 Score = 32.7 bits (73), Expect = 0.80
 Identities = 24/107 (22%), Positives = 53/107 (49%)
 Frame = +1

Query: 91  PSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYS 270
           PS   H  +L +   D+KL+  +  G+ + ++  + RR+H+     T  A+++VR+  + 
Sbjct: 85  PSLIKHPVSLKTILVDSKLKFDDIRGVNKWLMEFVARRQHQRNIVLT-PASKSVRS--FH 141

Query: 271 LLNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQMMEKVQN 411
           +L+L S  + +L+              ++NI  E+ N   +  +V++
Sbjct: 142 VLHLSSTDIAKLRG-------------LENILSEIENTNDLQSRVES 175

>OTU6B_XENLA (Q6GM06) OTU domain-containing protein 6B|
          Length = 294

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
 Frame = +1

Query: 49  QQEATGRQTRRLKQPSKRGHAAALISAPTD--TKLEMGETEGMKENMLSEIQRRKHEGTT 222
           + E   R    L+  +++      +S+ T+  T L++G  E +++  +S+ Q+R+ +   
Sbjct: 54  EAEVEARHKEELEALAQKPTEPTQVSSITNGVTSLDLGSEEPVQQPRVSKAQKRREKKAA 113

Query: 223 SETQSATETVRAEIYSL---LNLISKKVTELKAEPKPRISDEVQIHMDN--IYREVTNLL 387
            E +       AEI +L    +L S+K+ ++ AE + +I    QI  D   +YR + + L
Sbjct: 114 QEKERDDRIAEAEIANLSGARHLESQKLAQILAERELQIR---QIPSDGHCMYRAIEHQL 170

>Y894_HAEIN (Q57500) Hypothetical protein HI0894|
          Length = 382

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 31/137 (22%), Positives = 57/137 (41%)
 Frame = +1

Query: 106 HAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNLI 285
           H    ++A TD +L  GET   +   ++ I+   +  T      AT         L  + 
Sbjct: 211 HIGQRVTATTDARL--GETFSAR---ITAIEPAINSSTGLVDVQATFDPEDGHKLLSGMF 265

Query: 286 SKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQMMEKVQNSEIPGKEPFSEKMGVEGI 465
           S+    L  E    +  +V I   N+Y E+  LL+ + + +  ++ G E        + I
Sbjct: 266 SRLRIALPTETNQVVVPQVAISY-NMYGEIAYLLEPLSEEEKGKMSGNEKLDRLYRAKQI 324

Query: 466 QIRTEDKCGSATETQGS 516
            + T+D+ G   + QG+
Sbjct: 325 TVFTKDRQGVYAQLQGN 341

>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 3/135 (2%)
 Frame = +1

Query: 37   ADIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEG 216
            A++++ +    QT R K        A +    T  +L++ ET+  K  +  E+QR K E 
Sbjct: 2302 AEMEKHKKFAEQTLRQK--------AQVEQELTTLRLQLEETDHQKNLLDEELQRLKAEA 2353

Query: 217  TTSETQSATETVRAEIYSL---LNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLL 387
            T +  Q +   V  E++S+   +  +SK    ++AE +  I  +       +  E   + 
Sbjct: 2354 TEAARQRS--QVEEELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMK 2411

Query: 388  QMMEKVQNSEIPGKE 432
            Q+ E+     +  +E
Sbjct: 2412 QVAEEAARLSVAAQE 2426

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
 Frame = +1

Query: 37   ADIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEG 216
            + +Q  +  G ++R L    +R   +A  S  TD + +  E E       S + R    G
Sbjct: 2582 SSVQTDDEDG-ESRYLLSRRRRARRSADCSVQTDDE-DSAEWEQPVRRRRSRLPRHSDSG 2639

Query: 217  T------TSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYR-EV 375
            +      T+ + SA  TVRA     +  IS    + + +  PR+S  + I      + E+
Sbjct: 2640 SDSKHDATASSSSAAATVRAMSSVGIQTISDCSVQTEPDQLPRVSPAIHITAATDPKVEI 2699

Query: 376  TNLLQMMEKVQNSEIPG--KEPFSEKMGVEGIQI 471
               +   EK    E      EP  +  GV G Q+
Sbjct: 2700 VRYISAPEKTGRGESLACQTEPDGQAQGVAGPQL 2733

>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated|
           exchange factor for Rab5) (Rabex-5)
          Length = 708

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 5/173 (2%)
 Frame = +1

Query: 22  CIGHGADIQQQ----EATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLS 189
           C G  A +Q Q     A+  Q   L QP K      L     +       ++G +    S
Sbjct: 203 CPGWSAMVQFQLTATSASWAQVILLLQPPKWLGLQKLQREEEEAFASSQSSQGAQSLTFS 262

Query: 190 EIQRRKHEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYR 369
           + + +K    T+E      TV+    +   + SKK  +    P P I+ +  I  D + +
Sbjct: 263 KFEEKK----TNEKTRKVTTVKKFFSASSRVGSKKEIQEAKAPSPSINRQTSIETDRVSK 318

Query: 370 EVTNLLQMMEKVQNSEIPGKEPFSE-KMGVEGIQIRTEDKCGSATETQGSTYY 525
           E    L+   K       G+E + + K+ +EG+  + +      +E     Y+
Sbjct: 319 EFIEFLKTFHKT------GQEIYKQTKLFLEGMHYKRDLSIEEQSECAQDFYH 365

>RDRP_PMV (P20951) RNA replication protein (176 kDa protein) (ORF 1 protein)|
            [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
            Helicase (EC 3.6.1.-)]
          Length = 1547

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/81 (28%), Positives = 39/81 (48%)
 Frame = +1

Query: 241  TETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQMMEKVQNSEI 420
            T  ++A + +L   +++ + E KAEP P       I  ++   E  N+++ M +    EI
Sbjct: 1064 TPYLKAFLSTLREEVAQPIEEKKAEPTPVEPPRTHIAKEDAMVEYENVIEKMPEKHEREI 1123

Query: 421  PGKEPFSEKMGVEGIQIRTED 483
                 FSEK G     ++TED
Sbjct: 1124 -----FSEKHGHSNC-VQTED 1138

>SYD_PYRAB (Q9V036) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 438

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +1

Query: 274 LNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTN-LLQMMEKVQNSEIPGKEPFSEKM 450
           L +ISK  T L  +P  ++  E+   +DN + ++ N  +  + K+++S       F  K 
Sbjct: 95  LEVISKAKTPLPLDPTGKVKAELDTRLDNRFMDLRNPRVMSIFKIRSSVFRATREFFYKE 154

Query: 451 GVEGIQIRTEDKCGSATE 504
           G   I+I T     +ATE
Sbjct: 155 GF--IEIHTPKIIATATE 170

>ITC1_YEAST (P53125) Imitation switch two complex protein 1|
          Length = 1264

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
 Frame = +1

Query: 31  HGADIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETE-GMKENMLSEIQRRK 207
           + A++   E+   + +R  + S + + +   S   +TK +   TE    EN  SE  ++K
Sbjct: 282 NSANVSSPES--EKNKRQSKSSGKSNTSNDASNKKETKKKRKPTEVNDSENNSSEEDKKK 339

Query: 208 HEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPK----PRISDEVQI---HMDNIY 366
            +  TSET S      A        +    T   AEP+      I D++ +   H  NI+
Sbjct: 340 GQNVTSETHSKKRKKEANEEPNTENVESVPTPANAEPQAVTITSIMDDLALPYQHPPNIF 399

Query: 367 REVTNLLQMMEKVQNSEIPGKEPF 438
             +T   + +E +         PF
Sbjct: 400 PNLTYYNEKLECISLGSTKLSRPF 423

>CCD93_RAT (Q5BJT7) Coiled-coil domain-containing protein 93|
          Length = 629

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 11/138 (7%)
 Frame = +1

Query: 67  RQTRRLKQPSKRGHAAALISAPTDTKL-EMGETEGMKENMLSEIQRRKHEGTTSETQSAT 243
           RQ++  K   K+   AA +SA   T   E  E +  +E  +  +  +       E++   
Sbjct: 213 RQSKTEKAEDKKTALAAGLSAAEKTDAHEEDELQAAEEQRIQSLMTKMTAMANEESRLTA 272

Query: 244 ETV-------RAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIY---REVTNLLQM 393
            +V        AEI  +++    K +EL AE  P      Q+H   +    +++    + 
Sbjct: 273 SSVGQIVGLCSAEIKQIVSEYEGKQSELSAEESPEKLGTSQLHQRKVISLNKQILQKTKH 332

Query: 394 MEKVQNSEIPGKEPFSEK 447
           +E++Q +    +  +S+K
Sbjct: 333 LEELQANHTSLQAKYSDK 350

>SMC1_YEAST (P32908) Structural maintenance of chromosome 1 (DA-box protein SMC1)|
          Length = 1225

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +1

Query: 175  ENMLSEIQRRKH--------EGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRI 330
            E +L+E+Q            EG      + TE ++AE   +LN   K + + + E   + 
Sbjct: 1009 EEILNELQPNARALERYDEAEGRFEVINNETEQLKAEEKKILNQFLK-IKKKRKELFEKT 1067

Query: 331  SDEVQIHMDNIYREVT 378
             D V  H+D IYRE+T
Sbjct: 1068 FDYVSDHLDAIYRELT 1083

>VIPC_SALTI (Q04975) Vi polysaccharide biosynthesis protein vipC/tviE|
          Length = 578

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 3/130 (2%)
 Frame = +1

Query: 43  IQQQE---ATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHE 213
           I Q+E   A G+    LKQ  K   A ALI +   T+         K   L ++   +  
Sbjct: 2   ITQEEKLAALGKTCLTLKQEKKLAQAVALIDSELPTEALTSLAMLKKAEFLHDVNETERA 61

Query: 214 GTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQM 393
               ET  A     A       L +  + +       ++S+ VQ   +N   ++  +  +
Sbjct: 62  YALYETLIAQNNDEARYEYARRLYNTGLAKDAQLILKKVSNGVQKKYNNYLGKINKICDL 121

Query: 394 MEKVQNSEIP 423
           +E+++   IP
Sbjct: 122 LERLEGKAIP 131

>ATPF_BACHD (Q9K6H1) ATP synthase B chain (EC 3.6.3.14)|
          Length = 162

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +1

Query: 157 ETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPK 321
           E E +KE  L+EIQR K        + A  ++R ++ SL  LI+ KV E + + K
Sbjct: 99  EGERLKEAALAEIQREK--------EQAVASLREQVASLSVLIATKVIEKELDEK 145

>LAM0_DROME (P08928) Lamin Dm0|
          Length = 622

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 23/142 (16%)
 Frame = +1

Query: 208 HEGTTSETQSATETVR-AEIYSLLNLISK------KVTELKAEPKPRISDEVQIHMDNIY 366
           H  T S   S T   R AE   L NL  +      +V  L+ E   R++ EVQ   D + 
Sbjct: 36  HSQTASSPLSPTRHSRVAEKVELQNLNDRLATYIDRVRNLETE-NSRLTIEVQTTRDTVT 94

Query: 367 REVTNLLQMMEKV---------------QNSEIPGKEPFSEKMGVEGIQIRTEDKCGSAT 501
           RE TN+  + E                   +EI  K  + E    E ++ + + K    T
Sbjct: 95  RETTNIKNIFEAELLETRRLLDDTARDRARAEIDIKRLWEEN---EELKNKLDKKTKECT 151

Query: 502 ETQGST-YYEYRLNAIFNGLNQ 564
             +G+   YE R N + N  NQ
Sbjct: 152 TAEGNVRMYESRANELNNKYNQ 173

>ISPE_BACHD (Q9KGK0) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 287

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
 Frame = +1

Query: 256 AEIYSLLNL--ISKKVTE-LKAEPKPRISDEVQIHMDNIYREVTNLLQMMEKVQNSEIPG 426
           A++Y  LN+  I    TE + A  + +  D +  H+ N+   VT  L +  +V+N +   
Sbjct: 178 ADVYKRLNVSAIDHPTTEHMIAAIEGKDFDGICHHLHNVLESVT--LDLYPEVRNIKEQM 235

Query: 427 KEPFSEKMGVEGIQIRTEDKCGSATETQGSTYYEYRLNAIFNGLNQLCTQL 579
           K     + G +G+ +      GS     G    E R+  I+NGL   C Q+
Sbjct: 236 K-----RFGADGVLMS-----GSGPTVFGLVSKESRVQRIYNGLRGFCHQV 276

>ACM5_RAT (P08911) Muscarinic acetylcholine receptor M5|
          Length = 531

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 34/149 (22%), Positives = 64/149 (42%)
 Frame = +1

Query: 37  ADIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEG 216
           AD+Q  ++     +R  +P++R    +  S P  +  +       + N  S    R+   
Sbjct: 227 ADLQGSDSVAEAKKR--EPAQRTLLRSFFSCPRPSLAQR------ERNQASWSSSRRSTS 278

Query: 217 TTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQMM 396
           TT +T  AT+ + A+        +++VT   + P     DE +   D ++       QM+
Sbjct: 279 TTGKTTQATD-LSADWEK-----AEQVTTCSSYPSSE--DEAKPTTDPVF-------QMV 323

Query: 397 EKVQNSEIPGKEPFSEKMGVEGIQIRTED 483
            K +  E PGKE  +++     +  RTE+
Sbjct: 324 YKSEAKESPGKESNTQETKETVVNTRTEN 352

>NOL6_MOUSE (Q8R5K4) Nucleolar protein 6 (Nucleolar RNA-associated protein)|
           (Nrap)
          Length = 1141

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +1

Query: 160 TEGMKENMLSEIQRRKHEGTTSETQSATETVR-AEIYSLLNLISKKVTELKAEPKPRISD 336
           TE   E +L  +   + E     T      +R  EI     L+  +V EL  E   R+S+
Sbjct: 40  TEPPAEGLLQPVNLSREELYKEPTNEELNRLRETEILFHSTLLRLQVEELLKEV--RLSE 97

Query: 337 EVQIHMDNIYREVTNLLQMMEKVQNSEI 420
           + +  +DN  +EVT  +Q +  V  +E+
Sbjct: 98  KKKERIDNFLKEVTKRIQKVPPVPEAEL 125

>YGHB_ECOLI (P0AA60) Inner membrane protein yghB|
          Length = 219

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 503 SVADPHLSSVLIWIPSTPIFSENGSLP 423
           ++ADPH+ SV+ ++    +F ENG LP
Sbjct: 18  ALADPHIVSVVYFVMFATLFLENGLLP 44

>YGHB_ECOL6 (P0AA61) Inner membrane protein yghB|
          Length = 219

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 503 SVADPHLSSVLIWIPSTPIFSENGSLP 423
           ++ADPH+ SV+ ++    +F ENG LP
Sbjct: 18  ALADPHIVSVVYFVMFATLFLENGLLP 44

>YGHB_ECO57 (P0AA62) Inner membrane protein yghB|
          Length = 219

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 503 SVADPHLSSVLIWIPSTPIFSENGSLP 423
           ++ADPH+ SV+ ++    +F ENG LP
Sbjct: 18  ALADPHIVSVVYFVMFATLFLENGLLP 44

>LAMC2_HUMAN (Q13753) Laminin gamma-2 chain precursor (Laminin 5 gamma 2 subunit)|
            (Kalinin/nicein/epiligrin 100 kDa subunit) (Laminin B2t
            chain) (Cell-scattering factor 140 kDa subunit) (CSF 140
            kDa subunit) (Large adhesive scatter factor 140 kDa
            subunit)
          Length = 1193

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 22/84 (26%), Positives = 39/84 (46%)
 Frame = +1

Query: 157  ETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISD 336
            ETE   +  LS +++  HEG  S + S    V   +  L+  + K  T+  A+   R + 
Sbjct: 781  ETEDYSKQALSLVRKALHEGVGSGSGSPDGAV---VQGLVEKLEK--TKSLAQQLTREAT 835

Query: 337  EVQIHMDNIYREVTNLLQMMEKVQ 408
            + +I  D  Y+    LL  + ++Q
Sbjct: 836  QAEIEADRSYQHSLRLLDSVSRLQ 859

>NUF2_YEAST (P33895) Myosin-like protein NUF2 (Nuclear filament-containing|
           protein 2) (Nuclear division protein NUF2)
          Length = 451

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 35/165 (21%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
 Frame = +1

Query: 160 TEGMKENMLSEIQRRK-------HEGTTSETQSATETVRAEIYSLLNLISKKV------- 297
           +EG+KE     IQR+K        +    +T +  ET+ +E+Y +L +IS +V       
Sbjct: 256 SEGIKELNDLLIQRKKTLDDLTAQQKNLQDTVTTFETIISELYDVLRIISSEVQESNRTE 315

Query: 298 TELKAEPKPRISDEVQIHMDNIYREVTNLLQMMEKVQNSEIPGKEPFSEKMGVEG----- 462
           TEL    +  I++++++ M+ +   +   L+++++  + ++   E  S+    E      
Sbjct: 316 TELVGLKQNLINNKLKL-MNVLETGIMYKLEILQEQLDLQLKNLEKLSQDTKEESRLNDT 374

Query: 463 ----IQIRTEDKCGSATETQGSTYYEYRLNAIFNGLNQLCTQLDQ 585
               +QI+ E++     +       E  ++   N LN    QL +
Sbjct: 375 KLMDLQIKYENEIKPKIDKTDIFIQEELISGKINKLNDEIKQLQK 419

>GRAP1_RAT (Q9JHZ4) GRIP1-associated protein 1 (GRASP-1)|
          Length = 837

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +1

Query: 46  QQQEATGRQTRRLK---QPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEG 216
           Q+ EA  +    L+   Q  +  HAAAL +       +  + +   E +L+E        
Sbjct: 279 QELEAANQSLAELRDQRQGERLEHAAALRALQDQVSSQSADAQEQVEGLLAE------NN 332

Query: 217 TTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISD 336
               + +A E ++      LN++ ++ TEL AE K R +D
Sbjct: 333 ALRTSLAALEQIQTAKTQELNMLREQNTELAAELKHRQAD 372

>YQY1_CAEEL (Q09560) Hypothetical protein F36G3.1|
          Length = 964

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
 Frame = +1

Query: 40  DIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRR---KH 210
           D+ QQ   G    + +  +             DT + + +T   +E    E +R+   + 
Sbjct: 125 DVAQQLLNGVSDDKTETEAGNNDVIIAEEDRADTPIVIEDTREFEETYSEEDERQTPIQM 184

Query: 211 EGTTSETQSATETVRAEIYSLLNLISKKVTELK 309
           E  TSE  S+ + +   +  L N +  K+TE++
Sbjct: 185 ENATSEVSSSEDEISDSVVELTNDMMSKITEIE 217

>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687|
          Length = 1237

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +2

Query: 413  ARFRAKSHSRRRWVWKGSRLGLKTSVDQQPRRRGRPTTNTD*MQSSTG 556
            +R R  SH +RR V K S LGL    ++ P  R  P      + +S G
Sbjct: 1151 SRHRFISHKKRRGVGKASALGLGDGEEEAPPSRSDPDGGDSPLPASGG 1198

>CD209_HYLLA (Q8HY03) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing|
           nonintegrin 1) (DC-SIGN1)
          Length = 450

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
 Frame = +1

Query: 10  NLXNCIGHGADIQQQEATGRQTRRLKQPSKRGHAAALISAPTD------TKLEMGETEGM 171
           +L  C+GHGA + Q  +       L Q SK   + +   +  D      T+L+    E  
Sbjct: 33  SLAGCLGHGALVLQLLSFTLLAGLLIQVSKFPSSISQEQSKQDAIYQNLTQLKAAVGEFS 92

Query: 172 KENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIH 351
           +++ L EI +   +   +  +   ++ + EIY  L  +   V EL  + K          
Sbjct: 93  EKSKLQEIYQELTQLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSK---------- 142

Query: 352 MDNIYREVTNLL----QMMEKVQNSEI 420
              IY+E+T L     ++ EK +  EI
Sbjct: 143 QQEIYQELTRLKAAVGELPEKSKQQEI 169

>GIDA_MYCPU (Q98QV8) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 611

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
 Frame = +1

Query: 238 ATETVRAEIYSLLNLIS--KKVTELKAEPKPRISD-------EVQIHMDNIYREVTNLLQ 390
           +++T  A+ Y + N IS  + +T    EP   I D        +QI ++   ++  N   
Sbjct: 484 SSKTDFAQKYKIENGISYFQALTRPDIEPSDLIKDFEFLNEMTIQIRLEGYIKKQNNAAA 543

Query: 391 MMEKVQNSEIPGKEPFSE 444
            ME+++N +IP K  +S+
Sbjct: 544 KMERLENLKIPEKIDYSQ 561

>RASA2_RAT (Q63713) Ras GTPase-activating protein 2 (GAP1m)|
          Length = 847

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
 Frame = +1

Query: 109 AAALISAPT---DTKLEMGETEGMKENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLN 279
           AAAL  AP      + E G+ +  +  +L  ++ R +E            +R + +  +N
Sbjct: 8   AAALTEAPAVPGTAEPETGDEDSREVRVLQSLRGRIYEAKNLLPYLGPNKMR-DCFCTIN 66

Query: 280 LISKKVTELKAEPK---PRISDEVQIHMDNIYREVTNLLQMMEKVQNSEIPGKEPFSEKM 450
           L  ++V   +   K   P  S+E        Y E+    Q +    +  +  K      +
Sbjct: 67  LDQEEVYRTQVVEKSLSPYFSEE-------FYFEIPRTFQYL----SFYVYDKNVLQRDL 115

Query: 451 GVEGIQIRTEDKCG--------------SATETQGSTYYEYRLNAIFNGLNQLCTQL 579
            +  + I+ ED C               S +E QG  + E +LN +      +C QL
Sbjct: 116 RIGKVAIKKEDLCSHSGKETWFSLQPIDSNSEVQGKVHLELKLNELITENGTVCQQL 172

>TLE6_MOUSE (Q9WVB3) Transducin-like enhancer protein 6 (Groucho-related|
           protein 6)
          Length = 581

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
 Frame = +1

Query: 220 TSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIHMDNIYREVTNLLQMME 399
           TS  QS+ +T    + S L+     +     E    +  E+ +H++NI+    N  Q +E
Sbjct: 2   TSHRQSS-DTFGGILPSTLSSRYLSIVNQLPEEFSSVVSEMMVHLENIFSLAENFFQAIE 60

Query: 400 KVQNS-EIPGKEPFSEKMGVEG----IQIRTEDKCGSATETQGSTYYE 528
           +   + ++  +   S  +G EG      +  E   GSA  T+ S   E
Sbjct: 61  RFSRTPDLLERNKMSIGVGAEGDSWPCHVSHEAPMGSAQTTENSAKEE 108

>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
 Frame = +1

Query: 40   DIQQQEATGRQTRRLKQPSKRGHAAALISAPTDTKLEMGETEGMKENMLSEIQRRKHEGT 219
            ++ ++E   +   +LK      H A +    TD +  +   E  ++ +  E  RRK EG 
Sbjct: 1007 NLTEEEEKSKSLAKLKNK----HEAMI----TDLEERLRREEKQRQEL--EKTRRKLEGD 1056

Query: 220  TSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEV---QIHMDNIYREVTNLLQ 390
            +S+       ++A+I  L   +SKK  EL+A    R+ +E     + +  I    + + +
Sbjct: 1057 SSDLHDQIAELQAQIAELKIQLSKKEEELQA-ALARVEEEAAQKNMALKKIRELESQITE 1115

Query: 391  MMEKVQNSEIPGKEPFSEKMG----VEGIQIRTEDKCGSATETQ 510
            + E +++      +   +K      +E ++   ED   S    Q
Sbjct: 1116 LQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQ 1159

>CD209_HYLCO (Q8HY01) CD209 antigen (Dendritic cell-specific ICAM-3-grabbing|
           nonintegrin 1) (DC-SIGN1)
          Length = 404

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
 Frame = +1

Query: 10  NLXNCIGHGADIQQQEATGRQTRRLKQPSKRGHAAALISAPTD------TKLEMGETEGM 171
           +L  C+GHGA + Q  +       L Q SK   + +   +  D      T+L+    E  
Sbjct: 33  SLAGCLGHGALVLQLLSFTLLAGLLIQVSKFPSSISQEQSKQDAIYQNLTQLKAAVGELS 92

Query: 172 KENMLSEIQRRKHEGTTSETQSATETVRAEIYSLLNLISKKVTELKAEPKPRISDEVQIH 351
           +++ L EI +   +   +  +   ++ + EIY  L  +   V EL  + K          
Sbjct: 93  EKSKLQEIYQELTQLKAAVGELPEKSKQQEIYQELTQLKAAVGELPEKSK---------- 142

Query: 352 MDNIYREVTNLL----QMMEKVQNSEI 420
              IY+E+T L     ++ EK +  EI
Sbjct: 143 QQEIYQELTQLKAAVGELPEKSKQQEI 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.128    0.345 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,740,256
Number of Sequences: 219361
Number of extensions: 1426575
Number of successful extensions: 3525
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3524
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)