ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5n17 |
|---|---|
| Clone Library Name | barley_pub |
>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 350 Score = 405 bits (1042), Expect = e-113 Identities = 199/219 (90%), Positives = 208/219 (94%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 QVG IA NDGI+LRNHISR+LR HFK KPYYADLLDLFNEVEFKTASGQ+LDLITTHEGE Sbjct: 121 QVGLIAANDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTASGQLLDLITTHEGE 180 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDLTKYNI VH RIVQ+KTAYYSFYLPVACALLLSGENL+NYG VENILVEMGTYFQVQD Sbjct: 181 KDLTKYNITVHGRIVQYKTAYYSFYLPVACALLLSGENLDNYGDVENILVEMGTYFQVQD 240 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQK ILFENYGKKDPACVAKVK+ Sbjct: 241 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKRILFENYGKKDPACVAKVKN 300 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LYKEL+LE +F EYE+ESYKKLI DIEAQPSIAVQKVLK Sbjct: 301 LYKELDLEAVFQEYENESYKKLIADIEAQPSIAVQKVLK 339
>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 340 bits (873), Expect = 2e-93 Identities = 163/219 (74%), Positives = 194/219 (88%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDG+LLRNHI R+L+ HF+ KPYYADLLDLFNEVEF+TASGQM+DLITT EGE Sbjct: 113 KVGMIAANDGVLLRNHIPRILKKHFRGKPYYADLLDLFNEVEFQTASGQMIDLITTLEGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY + +HRRIVQ+KTAYYSFYLPVACALL+ GENL+N+ V+NILV+MGTYFQVQD Sbjct: 173 KDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHIDVKNILVDMGTYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+KCSWLVV+ALE +++ QK +L++NYGK DPA VAKVK Sbjct: 233 DYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNDEQKKVLYDNYGKPDPANVAKVKA 292 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LY ELNL+G+F EYES+SY+KL+T IEA PS AVQ +LK Sbjct: 293 LYDELNLQGVFTEYESKSYEKLVTSIEAHPSKAVQALLK 331
>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 338 bits (867), Expect = 8e-93 Identities = 163/219 (74%), Positives = 191/219 (87%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDG++LRNHI R+L+ HF+ KPYY DLLDLFNEVEF+TASGQM+DLITT EGE Sbjct: 113 KVGMIAPNDGVVLRNHIPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY + +HRRIVQ+KTAYYSFYLPVACALL+ GENL+N+ V+NILVEMGTYFQVQD Sbjct: 173 KDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMVGENLDNHTDVKNILVEMGTYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+KCSWLVV+ALE ++E QK +L+ENYGK DPA VAKVK Sbjct: 233 DYLDCFGAPETIGKIGTDIEDFKCSWLVVKALELSNEEQKKVLYENYGKPDPANVAKVKT 292 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LY ELNLEG + +YES+SY+KL+T IE PS AVQ VLK Sbjct: 293 LYNELNLEGAYADYESKSYEKLVTCIEGHPSKAVQGVLK 331
>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 336 bits (862), Expect = 3e-92 Identities = 160/219 (73%), Positives = 190/219 (86%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDGI+LRNH+ R+L+ HF+ KPYY DL+DLFNEVEF+TASGQM+DLITT GE Sbjct: 113 KVGMIAANDGIILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY++ +HRRIVQ+KTAYYSFYLPVACALL+ GE+LE + V+N+LVEMGTYFQVQD Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHVEVKNVLVEMGTYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+KCSWLVV+ALE A+E QK +L ENYGKKDP+ VAKVK+ Sbjct: 233 DYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELANEEQKKVLHENYGKKDPSPVAKVKE 292 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LY LNL+G+F +YE+ SYKKLIT IE PS AVQ VLK Sbjct: 293 LYNTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLK 331
>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial| precursor (FPP synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 384 Score = 335 bits (858), Expect = 9e-92 Identities = 159/219 (72%), Positives = 188/219 (85%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 QVG +A+NDGILLRNHI R+L+ HF+ KPYY DL+DLFNEVE +TA GQM+DLITT EGE Sbjct: 155 QVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGE 214 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL KY++ +HRRIVQ+KTAYYSFYLPVACALL++GENLEN+ V+N+LV+MG YFQVQD Sbjct: 215 KDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQD 274 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+ DPE +GKIGTDIED+KCSWLVV+ALER E Q IL+ENYGK DP+ VAKVKD Sbjct: 275 DYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKD 334 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LYKEL+LEG+F EYES+SY+KL IE S A+Q VLK Sbjct: 335 LYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLK 373
>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)| (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 335 bits (858), Expect = 9e-92 Identities = 160/219 (73%), Positives = 190/219 (86%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDGI+LRN++ R+L+ HF+ KPYY DLLDLFNEVEF+TASGQM+DLITT GE Sbjct: 113 KVGMIAANDGIILRNNVPRILKKHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLVGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY++ +HRRIVQ+KTAYYSFYLPVACALL+ GE+LE + V+N+LVEMGTYFQVQD Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLEKHEEVKNVLVEMGTYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+KCSWLVV+ALE ++E QK IL ENYGKKDP+ VAKVK+ Sbjct: 233 DYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELSNEEQKKILHENYGKKDPSSVAKVKE 292 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LY LNL+G+F +YE+ SYKKLIT IE PS AVQ VLK Sbjct: 293 LYHTLNLQGVFEDYENTSYKKLITSIEGHPSKAVQAVLK 331
>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 343 Score = 330 bits (845), Expect = 3e-90 Identities = 158/219 (72%), Positives = 187/219 (85%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDGILLRNH+ R+L+ HF+ KPYY DL+DLFNEVEF+TASGQM+DLITT GE Sbjct: 114 KVGMIAANDGILLRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGE 173 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY++ +HRRIVQ+KTAYYSFYLPVACALL+ GE+L+ + V+N+LVEMGTYFQVQD Sbjct: 174 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDKHVEVKNVLVEMGTYFQVQD 233 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+KCSWLVV+ALE +E QK L ENYGKKDPA VAKVK+ Sbjct: 234 DYLDCFGAPEVIGKIGTDIEDFKCSWLVVKALELPNEEQKKTLHENYGKKDPASVAKVKE 293 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 +Y LNL+ +F +YE+ SYKKLIT IE PS AVQ VLK Sbjct: 294 VYHTLNLQAVFEDYEATSYKKLITSIENHPSKAVQAVLK 332
>FPPS_HELAN (O64905) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 341 Score = 328 bits (842), Expect = 7e-90 Identities = 158/219 (72%), Positives = 189/219 (86%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA NDG++LRNH+ R+L+ HF+ KPYY DL+DLFNEVEF+TASGQM+DLITT GE Sbjct: 113 KVGMIAANDGLILRNHVPRILKKHFRGKPYYVDLVDLFNEVEFQTASGQMIDLITTLVGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY++ +HRRIVQ+KTAYYSFYLPVACALL+ GE+L+N+ V+N+LVEMGTYFQVQD Sbjct: 173 KDLSKYSLSIHRRIVQYKTAYYSFYLPVACALLMFGEDLDNHVEVKNVLVEMGTYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+G PE IGKIGTDIED+ SWLVV+ALE A+E QK +L ENYGKKDP+ VAKVK+ Sbjct: 233 DYLDCFGAPEVIGKIGTDIEDFS-SWLVVKALELANEEQKKVLHENYGKKDPSSVAKVKE 291 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LY LNL+G+F +YES SYKKLIT IE PS AVQ VLK Sbjct: 292 LYNTLNLQGVFEDYESTSYKKLITSIEGHPSKAVQAVLK 330
>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)| (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 342 Score = 326 bits (835), Expect = 4e-89 Identities = 155/219 (70%), Positives = 187/219 (85%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA+NDGILLRNHI R+L+ HF++ PYY DL+DLFNEVEF+TA GQM+DLITT +GE Sbjct: 113 KVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGE 172 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQD 363 KDL+KY++ +HRRIV++KTAYYSFYLPVACALL++GENLEN+ V+ +LV+MG YFQVQD Sbjct: 173 KDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHTDVKTVLVDMGIYFQVQD 232 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+ DPE +GKIGTDIED+KCSWLVV+ALER E Q IL+ENYGK +P+ VAKVK Sbjct: 233 DYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKA 292 Query: 544 LYKELNLEGLFHEYESESYKKLITDIEAQPSIAVQKVLK 660 LYKEL+LEG F EYE ESY+KL IEA S A+Q VLK Sbjct: 293 LYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLK 331
>FPPS_RAT (P05369) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 212 bits (539), Expect = 9e-55 Identities = 103/207 (49%), Positives = 148/207 (71%), Gaps = 1/207 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 +G A+ND +LL I R+L+ + +++PYY +LL+LF + ++T GQ LDLIT +G+ Sbjct: 124 IGLDAINDALLLEAAIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLITAPQGQV 183 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL +Y ++ IV++KTA+YSFYLP+A A+ ++G + + + IL+EMG +FQ+QD Sbjct: 184 DLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILLEMGEFFQIQD 243 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLD +GDP GK+GTDI+D KCSWLVVQ L RA Q+ IL ENYG+KDP VA+VK Sbjct: 244 DYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRATPQQRQILEENYGQKDPEKVARVKA 303 Query: 544 LYKELNLEGLFHEYESESYKKLITDIE 624 LY+EL+L +F +YE +SY +L + IE Sbjct: 304 LYEELDLRSVFFKYEEDSYNRLKSLIE 330
>FPPS_YEAST (P08524) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 352 Score = 211 bits (536), Expect = 2e-54 Identities = 102/203 (50%), Positives = 141/203 (69%), Gaps = 1/203 (0%) Frame = +1 Query: 4 QVGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGE 183 +VG IA+ND +L I ++L+ HF+ + YY D+ +LF+EV F+T GQ++DLIT E + Sbjct: 120 EVGEIAINDAFMLEAAIYKLLKSHFRNEKYYIDITELFHEVTFQTELGQLMDLITAPEDK 179 Query: 184 KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLE-NYGAVENILVEMGTYFQVQ 360 DL+K+++ H IV FKTAYYSFYLPVA A+ ++G E + ++L+ +G YFQ+Q Sbjct: 180 VDLSKFSLKKHSFIVTFKTAYYSFYLPVALAMYVAGITDEKDLKQARDVLIPLGEYFQIQ 239 Query: 361 DDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVK 540 DDYLDC+G PE IGKIGTDI+D KCSW++ +ALE A Q+ L ENYGKKD AK K Sbjct: 240 DDYLDCFGTPEQIGKIGTDIQDNKCSWVINKALELASAEQRKTLDENYGKKDSVAEAKCK 299 Query: 541 DLYKELNLEGLFHEYESESYKKL 609 ++ +L +E L+HEYE K L Sbjct: 300 KIFNDLKIEQLYHEYEESIAKDL 322
>FPPS_CHICK (P08836) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 367 Score = 210 bits (535), Expect = 3e-54 Identities = 100/207 (48%), Positives = 146/207 (70%), Gaps = 1/207 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG A+ND LL + + R+L+ + +++PYY LL+LF + ++T GQMLDLIT + Sbjct: 138 VGLDAINDSFLLESSVYRVLKKYCRQRPYYVHLLELFLQTAYQTELGQMLDLITAPVSKV 197 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL+ ++ ++ IV++KTA+YSFYLPVA A+ + G ++ E + + IL+EMG YFQ+QD Sbjct: 198 DLSHFSEERYKAIVKYKTAFYSFYLPVAAAMYMVGIDSKEEHENAKAILLEMGEYFQIQD 257 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDC+GDP GK+GTDI+D KCSWLVVQ L+R Q+ +L +NYG+K+P VAKVK+ Sbjct: 258 DYLDCFGDPALTGKVGTDIQDNKCSWLVVQCLQRVTPEQRQLLEDNYGRKEPEKVAKVKE 317 Query: 544 LYKELNLEGLFHEYESESYKKLITDIE 624 LY+ + + F +YE SY++L IE Sbjct: 318 LYEAVGMRAAFQQYEESSYRRLQELIE 344
>FPPS_MOUSE (Q920E5) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) (Cholesterol-regulated 39 kDa protein) (CR 39) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 209 bits (531), Expect = 8e-54 Identities = 102/207 (49%), Positives = 146/207 (70%), Gaps = 1/207 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 +G A+ND +LL I R+L+ + +++PYY +LL+LF + ++T GQ LDL+T +G Sbjct: 124 IGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTLDLMTAPQGHV 183 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL +Y ++ IV++KTA+YSFYLP+A A+ ++G + + + IL+EMG +FQVQD Sbjct: 184 DLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILMEMGEFFQVQD 243 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLD +GDP GK+GTDI+D KCSWLVVQ L RA Q+ IL ENYG+KDP VA+VK Sbjct: 244 DYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLLRASPQQRQILEENYGQKDPEKVARVKA 303 Query: 544 LYKELNLEGLFHEYESESYKKLITDIE 624 LY+ L+L+ F +YE +SY +L + IE Sbjct: 304 LYEALDLQSAFFKYEEDSYNRLKSLIE 330
>FPPS_HUMAN (P14324) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 353 Score = 204 bits (520), Expect = 1e-52 Identities = 100/207 (48%), Positives = 146/207 (70%), Gaps = 1/207 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG A+ND LL I R+L+L+ +++PYY +L++LF + ++T GQ LDL+T +G Sbjct: 124 VGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNV 183 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL ++ ++ IV++KTA+YSFYLP+A A+ ++G + + + + IL+EMG +FQ+QD Sbjct: 184 DLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQD 243 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLD +GDP GKIGTDI+D KCSWLVVQ L+RA Q IL ENYG+K+ VA+VK Sbjct: 244 DYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKA 303 Query: 544 LYKELNLEGLFHEYESESYKKLITDIE 624 LY+EL+L +F +YE +SY ++ IE Sbjct: 304 LYEELDLPAVFLQYEEDSYSHIMALIE 330
>FPPS_KLULA (P49349) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 349 Score = 204 bits (520), Expect = 1e-52 Identities = 98/202 (48%), Positives = 142/202 (70%), Gaps = 1/202 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG IA+ND +L I +L+ HF+ +PYY DLL+LF++V F+T GQ+LDLIT E + Sbjct: 118 VGDIAINDAFMLEGAIYCLLKKHFRTEPYYVDLLELFHDVTFQTELGQLLDLITAPEDKV 177 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL+K+++ H IV FKTAYYSFYL VA A+ +G + ++ ++L+ +G YFQ+QD Sbjct: 178 DLSKFSLEKHSFIVIFKTAYYSFYLAVALAMFAAGITDSKDLKQASDVLIPLGEYFQIQD 237 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 D+LDC+G PE IGKIGTDI+D KCSW++ AL+ A + Q+ IL ENYG+KD K + Sbjct: 238 DFLDCFGKPEDIGKIGTDIQDNKCSWVINVALKNATKEQRDILDENYGRKDSEKEQKCRA 297 Query: 544 LYKELNLEGLFHEYESESYKKL 609 ++ ELN++ ++H+YE E+ L Sbjct: 298 VFNELNIQDIYHKYEEETASNL 319
>FPPS_SCHPO (O14230) Probable farnesyl pyrophosphate synthetase (FPP| synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 197 bits (500), Expect = 3e-50 Identities = 100/210 (47%), Positives = 140/210 (66%), Gaps = 4/210 (1%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG IA+ND ++ + I +L+ HF+++ Y DL++LF++V F+T GQ LDL+T E Sbjct: 116 VGNIAINDAFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSV 175 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSG-ENLENYGAVENILVEMGTYFQVQD 363 DL+K+++ H IV +KTA+YSFYLPVA A+ L+G EN ++IL+ +G YFQVQD Sbjct: 176 DLSKFSLQKHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQD 235 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLDCYGDP GKIGTDI D KCSW++ AL + Q+ IL +NYG+KD +VK Sbjct: 236 DYLDCYGDPTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKA 295 Query: 544 LYKELNLEGLFHEYES---ESYKKLITDIE 624 +++ELN+ G F YE KKLI ++ Sbjct: 296 VFEELNIRGEFENYEESEVSEIKKLIDGVD 325
>FPPS_NEUCR (Q92250) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 192 bits (488), Expect = 8e-49 Identities = 102/218 (46%), Positives = 139/218 (63%), Gaps = 4/218 (1%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG +A+ND +L + I +L+ +F+ P Y D L+LF+EV F+T GQ+ DL+T E + Sbjct: 116 VGMVAINDAFMLESAIYTLLKKYFRSHPRYVDFLELFHEVTFQTEMGQLCDLLTAPEDKV 175 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACAL-LLSGENLENYGAVENILVEMGTYFQVQD 363 DL +++ + IV +KTAYYSFYLPVA A+ +L EN E+IL+ +G YFQVQD Sbjct: 176 DLDNFSMDKYTFIVIYKTAYYSFYLPVALAMYMLDIATPENLKQAEDILIPLGEYFQVQD 235 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLD +G PE IGKIGTDI+D KCSWLV +AL Q+ L ENYG+KD A A +K Sbjct: 236 DYLDNFGLPEHIGKIGTDIQDNKCSWLVNKALSIVTPEQRKTLEENYGRKDKAKEAVIKQ 295 Query: 544 LYKELNLEGLFHEYESE---SYKKLITDIEAQPSIAVQ 648 LY +L LE + +YE E +K+I I+ + Q Sbjct: 296 LYDDLKLEDHYKQYEEERVGEIRKMIDAIDESKGLKKQ 333
>FPPS_GIBFU (Q92235) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)| (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] Length = 347 Score = 184 bits (466), Expect = 3e-46 Identities = 97/197 (49%), Positives = 129/197 (65%), Gaps = 1/197 (0%) Frame = +1 Query: 7 VGFIAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTASGQMLDLITTHEGEK 186 VG IA+ND +L + I +L+ +F+ P Y DL++ F+E F+T GQ+ DL+T E Sbjct: 116 VGMIAINDAFMLESAIYTLLKKYFRSHPAYFDLIESFHETTFQTELGQLCDLLTAPEDNV 175 Query: 187 DLTKYNIGVHRRIVQFKTAYYSFYLPVACAL-LLSGENLENYGAVENILVEMGTYFQVQD 363 +L +++ + IV +KTAYYSFYLPVA AL L+ N E+IL+ +G YFQ+QD Sbjct: 176 NLDNFSLEKYSFIVIYKTAYYSFYLPVALALHQLNLATPSNLKQAEDILIPLGEYFQIQD 235 Query: 364 DYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALERADESQKSILFENYGKKDPACVAKVKD 543 DYLD +G PE IGKIGTDI+D KCSWLV QAL A Q+ IL ENYG+KD VK Sbjct: 236 DYLDNFGKPEHIGKIGTDIKDNKCSWLVNQALAVATPEQRKILEENYGRKDDEKEKVVKK 295 Query: 544 LYKELNLEGLFHEYESE 594 LY +LNLE + +YE + Sbjct: 296 LYDDLNLEQRYLDYEEK 312
>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 325 Score = 59.3 bits (142), Expect = 1e-08 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%) Frame = +1 Query: 133 KTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYG 312 K GQ LD+ E D+T+ + ++ KTA A A++ G + + Sbjct: 144 KICEGQALDM--GFEERLDVTEEE---YMEMIYKKTAALIAAATKAGAIM-GGGSPQEIA 197 Query: 313 AVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSI 489 A+E+ +G FQ+ DDYLD D E +GK +G+DI + K + +VV+ALERA E + Sbjct: 198 ALEDYGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRER 257 Query: 490 LFENYGKKDPACVAKVKDLYK 552 L G D VA+ ++++ Sbjct: 258 LISILGSGDEKLVAEAIEIFE 278
>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 324 Score = 58.9 bits (141), Expect = 1e-08 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Frame = +1 Query: 292 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERA 468 E LE+YG +G FQ+ DDYLD D E +GK +G+DI + K + +VV+ALE A Sbjct: 196 EALEDYGKF------IGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEA 249 Query: 469 DESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHE 582 E + L G D VA+ ++++ HE Sbjct: 250 SEEDRERLISILGSGDEGSVAEAIEIFERYGATQYAHE 287
>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate synthase| [Includes: Farnesyl pyrophosphate synthetase (EC 2.5.1.1) (FPP synthetase) (Dimethylallyltranstransferase); Geranyltranstransferase (EC 2.5.1.10)] Length = 327 Score = 52.8 bits (125), Expect = 9e-07 Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 1/85 (1%) Frame = +1 Query: 265 VACALLLSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSW 441 V +++ N E A++ +G FQ+QDD LD GD + +GK +G+DI + K + Sbjct: 185 VGIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTI 244 Query: 442 LVVQALERADESQKSILFENYGKKD 516 +V+ AL+ DE +K L E G K+ Sbjct: 245 IVIHALKTLDEDKKKRLLEILGNKN 269
>GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 332 Score = 47.4 bits (111), Expect = 4e-05 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 5/141 (3%) Frame = +1 Query: 139 ASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGE-NLENYGA 315 + GQ +D+ + E D+T+ + ++++ KTA + +C+ L G N N Sbjct: 150 SEGQAMDM--SFENRLDVTEEE---YIQMIKGKTA-----MLFSCSAALGGIINKANDDV 199 Query: 316 VENIL---VEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQK 483 V+ + + +G FQ+ DD L GD + +GK I +DI + K + LV++ L A E +K Sbjct: 200 VKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEK 259 Query: 484 SILFENYGKKDPACVAKVKDL 546 IL G K+ AK +DL Sbjct: 260 KILVSTLGNKE----AKKEDL 276
>ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 45.8 bits (107), Expect = 1e-04 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Frame = +1 Query: 103 LLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALL 282 +L++ +E A G++L L+ ++ D+T+ N + R++ KTA F C+ + Sbjct: 131 VLEVMSEAVNVIAEGEVLQLMNVND--PDITEEN---YMRVIYSKTARL-FEAAAQCSGI 184 Query: 283 LSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQAL 459 L+G E +++ +GT FQ+ DD LD D E +GK +G D+ + K + ++ A+ Sbjct: 185 LAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAM 244 Query: 460 ERADESQKSIL 492 Q ++ Sbjct: 245 HHGTPEQAQMI 255
>ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 323 Score = 45.8 bits (107), Expect = 1e-04 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Frame = +1 Query: 103 LLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALL 282 +L++ +E A G++L L+ ++ D+T+ N + R++ KTA F C+ + Sbjct: 131 VLEVMSEAVNVIAEGEVLQLMNVND--PDITEEN---YMRVIYSKTARL-FEAAAQCSGI 184 Query: 283 LSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQAL 459 L+G E +++ +GT FQ+ DD LD D E +GK +G D+ + K + ++ A+ Sbjct: 185 LAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAM 244 Query: 460 ERADESQKSIL 492 Q ++ Sbjct: 245 HHGTPEQAQMI 255
>GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPS) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 330 Score = 42.7 bits (99), Expect = 0.001 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 3/174 (1%) Frame = +1 Query: 109 DLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLS 288 D+F + GQ +D+ E D+ + + ++ KTA F + L++ Sbjct: 138 DIFTRSIIIISEGQAVDM--EFEDRIDIKEQE---YLDMISRKTAAL-FSASSSIGALIA 191 Query: 289 GENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALER 465 G N + + + +G FQ+ DD L D + +GK + +DI + K + LV++ LE Sbjct: 192 GANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKTLEL 251 Query: 466 ADESQKSILFENYGKKDPAC--VAKVKDLYKELNLEGLFHEYESESYKKLITDI 621 E +K I+ + G K + + D+ K+ +L+ ++ E + YK I + Sbjct: 252 CKEDEKKIVLKALGNKSASKEELMSSADIIKKYSLDYAYNLAE-KYYKNAIDSL 304
>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl| pyrophosphate synthetase) (OPP synthetase) Length = 329 Score = 38.9 bits (89), Expect = 0.014 Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 3/188 (1%) Frame = +1 Query: 103 LLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALL 282 +L + + A G++ L+ ++ E Y R++ KTA A A++ Sbjct: 137 ILSIMADATNVLAEGEVQQLMNVNDPETSEANY-----MRVIYSKTARLFEVAGQAAAIV 191 Query: 283 LSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQAL 459 G + A+++ +GT FQ+ DD LD + + +GK +G D+ + K + ++ A+ Sbjct: 192 AGGTEAQEK-ALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAM 250 Query: 460 ERADESQKSILFE--NYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIEAQP 633 + Q +++ E G K A + + + +L+ + + E+ +K + IE P Sbjct: 251 RHGNAQQAALIREAIEQGGKREAIDEVLAIMTEHKSLDYAMNRAKEEA-QKAVDAIEILP 309 Query: 634 SIAVQKVL 657 ++ L Sbjct: 310 ESEYKQAL 317
>ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 297 Score = 38.1 bits (87), Expect = 0.024 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Frame = +1 Query: 142 SGQMLDLITTHEGE-KDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAV 318 +GQ D+ EGE K LT + R K YS V L+ G + + Sbjct: 158 AGQAADM----EGEGKTLTLSELEYIHRHKTGKMLQYS----VHAGALIGGADARQTREL 209 Query: 319 ENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADE 474 + +G FQ++DD LD G E IGK +G+D + K ++ + +L A E Sbjct: 210 DEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKE 262
>ISPA_BUCAP (Q8K9A0) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 294 Score = 37.7 bits (86), Expect = 0.031 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Frame = +1 Query: 145 GQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGA--- 315 GQMLDL EK+ K NI +I +KTA+ + C++ L+ N+ Sbjct: 157 GQMLDL------EKERKKINISELEKINLYKTAFL-----IRCSIRLAYFASNNFSKEVL 205 Query: 316 --VENILVEMGTYFQVQDDYLDCYGD 387 ++ V +G FQ+QDD LD D Sbjct: 206 FILDKFSVSIGLAFQIQDDILDLKND 231
>ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 291 Score = 37.7 bits (86), Expect = 0.031 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Frame = +1 Query: 145 GQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVEN 324 GQMLD+ H K LT + RI KT V+ ++++ + + +E Sbjct: 153 GQMLDMQGEH---KTLTLNEL---ERIHIHKTGELIRAAIVSAGIIMNFNDAQ----IEQ 202 Query: 325 ILV---EMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSIL 492 + + +G FQ++DD LD G E IGK +G+D+ + K +++ + LE + + L Sbjct: 203 LNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKL 262 Query: 493 FENY 504 E Y Sbjct: 263 TETY 266
>ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 295 Score = 37.0 bits (84), Expect = 0.053 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 1/116 (0%) Frame = +1 Query: 145 GQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVEN 324 GQ LDLI+ H K ++ + + R + L C+ + + LE ++ Sbjct: 156 GQSLDLISEH---KQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQ--SLTQ 210 Query: 325 ILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSI 489 +G FQVQDD LD GD IGK +G D++ K ++ + L A + + + Sbjct: 211 YAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog (EC| 2.5.1.29) (GGPP synthetase) (Farnesyltranstransferase) Length = 300 Score = 36.6 bits (83), Expect = 0.069 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%) Frame = +1 Query: 145 GQMLDLITTHEGEKDLTKYN-IGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVE 321 GQ++DL + + + L N I +H+ + A S LL+G ++ Sbjct: 161 GQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLS-------GALLAGAKEKDMNRFL 213 Query: 322 NILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCS----WLVVQALERA----DE 474 +G FQ+ DD LD E +GK IG D++ K + W V +++++A +E Sbjct: 214 RYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIKQAELLVEE 273 Query: 475 SQKSILF 495 +++ IL+ Sbjct: 274 AKEEILY 280
>ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 272 Score = 35.8 bits (81), Expect = 0.12 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 7/158 (4%) Frame = +1 Query: 16 IAVNDGILLRNHISRMLRLHFKKKPYYADLLDLFNEVEFKTAS-----GQMLDLITTHEG 180 + DG+L + +++ H + L L NE+ + GQ+ D+ G Sbjct: 112 VLAGDGLLTESF--KLITSHVSDEVSAEKRLRLVNELISAAGTEGMVGGQVADM---EAG 166 Query: 181 EKDLTKYNI-GVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQV 357 + +T + +H R KT+ + +A A+L E+ + +G FQ+ Sbjct: 167 NRQVTLEELESIHER----KTSKLLGFCVIAGAILADAPE-EDIETLRTFSSHIGIGFQI 221 Query: 358 QDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERA 468 +DD LD G E IGK +G+D + K ++ + +LE A Sbjct: 222 RDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGA 259
>SC5A4_HUMAN (Q9NY91) Low affinity sodium-glucose cotransporter (Sodium/glucose| cotransporter 3) (Na(+)/glucose cotransporter 3) Length = 659 Score = 35.0 bits (79), Expect = 0.20 Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 12/156 (7%) Frame = +1 Query: 205 IGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAV---ENILVEMGTYFQVQDDYLD 375 +G+ R I +F S P C ++ G + + V ++LV +G Sbjct: 495 MGLIRMITEFAYGTGSCLAPSNCPKIICGVHYLYFSIVLFFGSMLVTLGI---------- 544 Query: 376 CYGDPEFIGKIGTDIEDYKCSWLV---------VQALERADESQKSILFENYGKKDPACV 528 + K D+ Y+ W++ + A E++ E + E+Y +K C+ Sbjct: 545 -----SLLTKPIPDVHLYRLCWVLRNSTEERIDIDAEEKSQEETDDGVEEDYPEKSRGCL 599 Query: 529 AKVKDLYKELNLEGLFHEYESESYKKLITDIEAQPS 636 K DL+ L + E E+ K +TD +PS Sbjct: 600 KKAYDLFCGLQKGPKLTKEEEEALSKKLTDTSERPS 635
>GGPPS_HEVBR (Q94ID7) Geranylgeranyl pyrophosphate synthetase, chloroplast| precursor (GGPP synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 370 Score = 33.1 bits (74), Expect = 0.76 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%) Frame = +1 Query: 142 SGQMLDLITTHEGEKDLTKYN-IGVHRRIVQFKTAYYSFYLPVACALLLSGENLENYGAV 318 +GQ++D+ + E DL K I +H+ + A V +L G E + Sbjct: 229 AGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGA-------VVLGAILGGGTDEEVEKL 281 Query: 319 ENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADE 474 ++G FQV DD LD + +GK G D+ K ++ + +E++ E Sbjct: 282 RKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSRE 334
>ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10)| (Farnesyl-diphosphate synthase) (FPP synthase) Length = 299 Score = 33.1 bits (74), Expect = 0.76 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = +1 Query: 337 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKSIL 492 +G FQVQDD LD GD +GK G D + K ++ + LE+A + + ++ Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLI 267
>SYA_MYCPU (Q98Q12) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 873 Score = 31.2 bits (69), Expect = 2.9 Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%) Frame = +1 Query: 298 LENYGAVENILVEMGTYFQVQDDYL----DCYGDPEFIGKIGTDIEDYKCSWLVVQALER 465 +ENY E + E+ TYF++ D++ + GD + +G D +++ + + R Sbjct: 263 VENYFQNEPVQREINTYFKIIADHMRSVANAIGDGAGVSNVGRD-------YIIRRLIRR 315 Query: 466 ADESQKSILFENYGKKDPACVAKVKDLYKELNLEGLFHEYESESYKKLITDIE 624 A + + G KD A + K+ + K + L +Y+++ K+I D E Sbjct: 316 AYRTGIQL-----GIKDEAFLYKLVPVIK----DSLIFDYDTKHVAKVIKDEE 359
>ACCA_COXBU (Q83BJ8) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 316 Score = 31.2 bits (69), Expect = 2.9 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +1 Query: 205 IGVHRRIVQFKTAYYSFYLPVACALLL------SGENLENYGAVENILVEMG 342 IGV R + + AYYS P CA +L +GE E G N L E+G Sbjct: 208 IGVGDRTLMLQYAYYSVISPEGCASILWKSAEKAGEAAEALGLTANRLHELG 259
>TNR6_BOVIN (P51867) Tumor necrosis factor receptor superfamily member 6| precursor (FASLG receptor) (Apoptosis-mediating surface antigen FAS) (Apo-1 antigen) (CD95 antigen) Length = 323 Score = 30.8 bits (68), Expect = 3.8 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = -2 Query: 556 VLCRDPSLLPHMLDLSFHSFQ-IECSFGSRQHAQELGQLARSTCNLQCRCQS 404 VLC + + D S HS + I CS +H E+ Q T N +CRC+S Sbjct: 80 VLCSEGN---EYTDKSHHSDKCIRCSICDEEHGLEVEQNCTRTRNTKCRCKS 128
>UL77_HCMVA (P16726) Protein UL77| Length = 642 Score = 30.4 bits (67), Expect = 4.9 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 292 ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDI 420 ++L YG + LV+ QV+DD L + +GK+G D+ Sbjct: 378 QHLPGYGTITEELVQERLSGQVRDDVLSLWSRRLLVGKLGRDV 420
>PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-)| Length = 323 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 11/84 (13%) Frame = +1 Query: 337 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVV----------QALERADESQK 483 MG FQ+ DD LD G + +GK G D + + ++ Q ++R ++ Sbjct: 207 MGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREFSDER 266 Query: 484 SILFENYGKKDPACVAKVKDLYKE 555 I + K + K KDL KE Sbjct: 267 DISLALFLIKKSGGITKAKDLAKE 290
>PREA_SYNY3 (P72580) Prenyl transferase (EC 2.5.1.-)| Length = 323 Score = 29.6 bits (65), Expect = 8.4 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 6/113 (5%) Frame = +1 Query: 100 DLLDLFNEVEFKTASGQMLDLITTHEGEKDLTKYNIGVHRRIVQFKTAYYSFYLPVACAL 279 +++ L +EV A G++L I + + DL Y + FKTA A + Sbjct: 134 EVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKSY-----FKTASLIANSAKAAGV 188 Query: 280 LLSG-----ENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDI 420 L ++L YG +G FQ+ DD LD E +GK G+D+ Sbjct: 189 LSDAPRDVCDHLYEYGK------HLGLAFQIVDDILDFTSPTEVLGKPAGSDL 235
>GGPP3_ARATH (Q9LUD9) Geranylgeranyl pyrophosphate synthetase 3, chloroplast| precursor (GGPP synthetase 3) (GGPS3) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farnesyltranstransferase (EC 2.5.1.29)] Length = 360 Score = 29.6 bits (65), Expect = 8.4 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 2/113 (1%) Frame = +1 Query: 142 SGQMLDLITTHEGEKDLTKYNIGV-HRRIVQFKTAYYSFYLPVACALLLSGENLENYGAV 318 +GQM+DL + L +G+ H + +++ G E + Sbjct: 217 AGQMIDLASER-----LNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKL 271 Query: 319 ENILVEMGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADE 474 +G FQV DD LD E +GK G D+ K ++ + LER+ E Sbjct: 272 RKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKE 324
>GGPPS_YEAST (Q12051) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)| (GGPPSase) (Geranylgeranyl diphosphate synthase) (BET2 suppressor protein 1) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10); Farn Length = 335 Score = 29.6 bits (65), Expect = 8.4 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%) Frame = +1 Query: 82 KKPYYADLLDLFNEVEFKTASGQMLD---------LITTHEGEKDLTKYNIGVHRRIVQF 234 K+P Y +L+ +FNE GQ LD +I T E ++ +V Sbjct: 120 KEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQE-----------MYLNMVMN 168 Query: 235 KTAYYSFYLPVACALLLSGENLENYGAVENILVEMGTYFQVQDDYLDCYGDPEFIGKIG- 411 KT F L + LS + + V I + +G +Q++DDYL+ D + + G Sbjct: 169 KTGGL-FRLTLRLMEALSPSSHHGHSLVPFINL-LGIIYQIRDDYLN-LKDFQMSSEKGF 225 Query: 412 -TDIEDYKCSWLVVQAL 459 DI + K S+ +V AL Sbjct: 226 AEDITEGKLSFPIVHAL 242
>PA_INCJJ (P13878) Polymerase acidic protein (RNA-directed RNA polymerase| subunit P2) Length = 709 Score = 29.6 bits (65), Expect = 8.4 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Frame = +1 Query: 274 ALLLSGENLENYGAVENILVEMGTYFQV----QDDYLDCYGDPEFI 399 A+ ++ E +E YG E ++++G +FQV D+YL G F+ Sbjct: 17 AVRIAKEAVEEYGDHERKIIQIGIHFQVCCMFCDEYLSTNGSDRFV 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,558,853 Number of Sequences: 219361 Number of extensions: 1838875 Number of successful extensions: 5204 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 5033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5189 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
