>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score =  557 bits (281), Expect = e-155
 Identities = 426/473 (90%), Gaps = 1/473 (0%)
 Strand = Plus / Plus

                                                                         
Query: 17    cacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacggagct 76
             ||||||||||||||||||||  ||||||||  |||| || ||| ||||||||||||||||
Sbjct: 70184 cacgtgattctacgcgtcaaggcaagcaatctacacgtaaagatcatctccaacggagct 70243

                                                                         
Query: 77    acggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtgcaac 136
             ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||
Sbjct: 70244 acggatcaaaagatacaagcaccgcaagatatgatggcatgaatgcaatatgtgtgcaac 70303

                                                                         
Query: 137   ggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcgagatt 196
             |||||||||||||||||||||  || |||||||||| | |||||| |||||| |||||||
Sbjct: 70304 ggcggtcacgagcacttcaaac-atacaaccagcaaaataaaatgaaactacacgagatt 70362

                                                                         
Query: 197   ctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacgagca 256
             |||||||||||||||| |||||||  |||||||||||||||||||||||| |||| ||||
Sbjct: 70363 ctaagcaagtttcatgtaggacacattcaaatcggagctacggttcaacatctacaagca 70422

                                                                         
Query: 257   aaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctcacaa 316
             |||||||||| |   |||||||| ||||| ||||| ||| ||| ||| ||| || |||||
Sbjct: 70423 aaacaagaaaacactacaatctgccaaaaccagccacatagcattttctacaccccacaa 70482

                                                                         
Query: 317   cttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaagaagc 376
             || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 70483 ctacggctacacaactccgatatgctcaagcaaggcatggcacggaagagggcaaggagc 70542

                                                                         
Query: 377   actactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaacaagac 436
             |||||||| ||||  ||||||||||||||||||| |||||||||||| |||| | |||||
Sbjct: 70543 actactacaaacaaataacaacaactagcatggcagcaaggagcactcggaagagaagac 70602

                                                                  
Query: 437   acaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 489
             |||||||| |||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 70603 acaaaatgacatctcacacactatttcagacatagtgaaaataacacctcatg 70655

>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score =  543 bits (274), Expect = e-151
 Identities = 424/474 (89%), Gaps = 5/474 (1%)
 Strand = Plus / Plus

                                                                         
Query: 13    ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
             ||||||||||||||||||||||||     |||||  |||| || ||||||||||||||||
Sbjct: 66878 ggttcacgtgattctacgcgtcaa-----gcaatctacacgtaaagaacatctccaacgg 66932

                                                                         
Query: 73    agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
             ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 66933 agctacggatcaaaagatacaagcaccgcaagatatgatggcatgaatgcaaaatgtgtg 66992

                                                                         
Query: 133   caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
             |||||||||  ||||||||||||||| || ||| |||| |||||||| | | |||| |||
Sbjct: 66993 caacggcggctacgagcacttcaaaacatacaaacagccagagaaaaagaagctacacga 67052

                                                                         
Query: 193   gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
             |||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||
Sbjct: 67053 gattctaagcaagtttcatgtaggacacgatcaaatcggagctacggttcgaaaactacg 67112

                                                                         
Query: 253   agcaaaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctc 312
             |||||||||||||| |   |||||||| ||| ||||||| ||| ||| ||| ||||||||
Sbjct: 67113 agcaaaacaagaaaacgctacaatctgccaagaacagccacatagcactttctacgcctc 67172

                                                                         
Query: 313   acaacttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaag 372
             ||||||||||||||||||||||||  ||||||||||||||| |||| | |||||||||||
Sbjct: 67173 acaacttcggctacacaactccgaggagctcaagcaaggcacggcatgaaagagggcaag 67232

                                                                         
Query: 373   aagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaaca 432
             | |||||||||| ||||  ||||||| ||||||||||| |||||||||||| |||||| |
Sbjct: 67233 acgcactactacaaacaactaacaactactagcatggcagcaaggagcacttggaaaaga 67292

                                                                   
Query: 433   agacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctc 486
             ||||||||||||||||||||| |||||||||||||||||||||||  |||||||
Sbjct: 67293 agacacaaaatggcatctcacgcactatttcagacttagtgaaaacaacacctc 67346

>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
            intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
            complete cds
          Length = 65979

 Score =  541 bits (273), Expect = e-151
 Identities = 427/477 (89%), Gaps = 1/477 (0%)
 Strand = Plus / Minus

                                                                        
Query: 13   ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
            ||||||| |||| |||||||||| | ||||||||  ||||||| || ||||| |||||||
Sbjct: 9047 ggttcacatgatcctacgcgtcatttcaagcaatctacacataaagcacatccccaacgg 8988

                                                                        
Query: 73   agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
            ||||| ||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 8987 agctagggatcgaaagttacaagcaccgcaagatatgatggcatgaatgcaaaatgtgtg 8928

                                                                        
Query: 133  caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
            ||||| |||||||||||||||||||| || ||| ||||||||||||||| |||||| |||
Sbjct: 8927 caacgacggtcacgagcacttcaaaacatacaaacagcaagagaaaatgaaactacacga 8868

                                                                        
Query: 193  gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
            |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 8867 gattctaagcaagtttcatgtaggacacgatcaaatcagagctacggttcaacaactacg 8808

                                                                        
Query: 253  agcaaaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctc 312
            |||||||||||||||    |||||||| ||||| ||||| ||| ||| ||| |||||| |
Sbjct: 8807 agcaaaacaagaaatgactacaatctgccaaaatcagccacatagcattttctacgcc-c 8749

                                                                        
Query: 313  acaacttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaag 372
            ||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 8748 acaactatggctacacaactccgatatgctcaagaaaggcatggcacggaagagggcaag 8689

                                                                        
Query: 373  aagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaaca 432
            |||||||||||| |||   |||||||||||| |||||| ||||||| ||||||  ||| |
Sbjct: 8688 aagcactactacaaactactaacaacaactaacatggcagcaaggatcactagagaaaga 8629

                                                                     
Query: 433  agacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 489
            || |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 8628 agtcacaaaatggcatcccacacactatttcagacttagtgaaatttacacctcatg 8572

>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
             sequence
          Length = 113510

 Score =  529 bits (267), Expect = e-147
 Identities = 427/478 (89%), Gaps = 3/478 (0%)
 Strand = Plus / Plus

                                                                         
Query: 13    ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
             ||||||||||||||||||| ||||  ||||||||  ||||||| ||||||||||||||||
Sbjct: 18407 ggttcacgtgattctacgcatcaaggcaagcaatctacacataaagaacatctccaacgg 18466

                                                                         
Query: 73    agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
             |||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||
Sbjct: 18467 agctacggatcaaaagttacaagcatcacaagatatgatggcatgaatgcaatatgtgtg 18526

                                                                         
Query: 133   caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
             |||||  ||  ||| ||||||||||| || | ||||||||||||||||| |||||| |||
Sbjct: 18527 caacgatggctacgggcacttcaaaacatactaccagcaagagaaaatgaaactacacga 18586

                                                                         
Query: 193   gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 18587 gattctaagcaagtttcatgtaggacacgatcaaatcggagctacggttcaacatctacg 18646

                                                                         
Query: 253   agcaaaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctc 312
             |||||| ||||||| |   |||||||| ||||| ||||| ||| ||| ||| |||||| |
Sbjct: 18647 agcaaagcaagaaaacactacaatctgccaaaatcagccacatagcactttctacgcccc 18706

                                                                         
Query: 313   acaacttcg-gctacacaactccgataagctcaagcaaggcatggcacggaagagggcaa 371
             |||||| || |||||||||||||||||| |||| ||||||||||||||| ||||||||||
Sbjct: 18707 acaactacgagctacacaactccgataaactcatgcaaggcatggcacgaaagagggcaa 18766

                                                                         
Query: 372   gaagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaac 431
             ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| 
Sbjct: 18767 gaagcactactacgaacagctaacaacaactagcatggcagcaaggaacactagggaaag 18826

                                                                       
Query: 432   aagacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 489
             ||| |||||||||||   || ||||||||||||||||||| |||||| ||||||||||
Sbjct: 18827 aagtcacaaaatggc--ttcccacactatttcagacttagagaaaataacacctcatg 18882

>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  502 bits (253), Expect = e-139
 Identities = 421/477 (88%)
 Strand = Plus / Plus

                                                                          
Query: 13     ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
              ||||||||||||||||||||||| | |||||||   ||||||  ||||||||||||||||
Sbjct: 104831 ggttcacgtgattctacgcgtcatttcaagcaacctacacatgaagaacatctccaacgg 104890

                                                                          
Query: 73     agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
              ||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||||||||
Sbjct: 104891 agctatggatcaaaagttacaagcaccgcaagatatgatgacatgaatgcaaaatgtgtg 104950

                                                                          
Query: 133    caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
              || ||||||  ||||||||||||||  || ||||||||||| ||||||| |||||| |||
Sbjct: 104951 cagcggcggctacgagcacttcaaagcatccaaccagcaagggaaaatgaaactacacga 105010

                                                                          
Query: 193    gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
              |||||||||||||||||||| |||||||||||| | ||||||||||| || ||| |||||
Sbjct: 105011 gattctaagcaagtttcatgtaggacacgatcacaacggagctacggatccacatctacg 105070

                                                                          
Query: 253    agcaaaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctc 312
              |||||||| |||||||   |||| ||| ||| ||||||| ||| ||   |  |||||| |
Sbjct: 105071 agcaaaacgagaaatcactacaacctgccaagaacagccacatagcttctcctacgcccc 105130

                                                                          
Query: 313    acaacttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaag 372
              |||||| ||| | ||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 105131 acaactacggatgcacaactccgatatgctcaaacaaggcatggcacggaagagggcaag 105190

                                                                          
Query: 373    aagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaaca 432
              |||||||||||| | ||  |||||||||||||  |||| ||||||||||||||| ||| |
Sbjct: 105191 aagcactactacaagcaactaacaacaactagtgtggcagcaaggagcactagggaaaga 105250

                                                                       
Query: 433    agacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 489
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105251 agacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 105307



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 72     gagctacggatcaaaagatacaagca 97
              ||||||| ||||||||||||||||||
Sbjct: 105444 gagctacagatcaaaagatacaagca 105469

>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
          Length = 59748

 Score =  478 bits (241), Expect = e-132
 Identities = 419/477 (87%), Gaps = 1/477 (0%)
 Strand = Plus / Plus

                                                                         
Query: 13    ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
             ||||||||||||||| ||||| | | ||||||||  ||||||| || ||||||||||| |
Sbjct: 39328 ggttcacgtgattctccgcgttatttcaagcaatctacacataaagtacatctccaacag 39387

                                                                         
Query: 73    agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
             ||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 39388 agctacggaccaaaagttacaagcaccgcaagatatgatggcatgaatgcaaaatgtgtg 39447

                                                                         
Query: 133   caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
             |||||||||  ||||||||||||| | || |||||| ||||||||||   |||||| |||
Sbjct: 39448 caacggcggctacgagcacttcaacacatgcaaccaacaagagaaaaaa-aactacacga 39506

                                                                         
Query: 193   gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
             ||||||||||||| |||||| ||||||||||||||||||||||||||  ||| | |||||
Sbjct: 39507 gattctaagcaagattcatgtaggacacgatcaaatcggagctacggaccaaaagctacg 39566

                                                                         
Query: 253   agcaaaacaagaaatcttcacaatctgtcaaaaacagccccatggcagtttatacgcctc 312
             |||||||||||||||    |||||||| ||||| || ||  || ||| ||  |||||| |
Sbjct: 39567 agcaaaacaagaaatgactacaatctgccaaaatcaaccatatagcatttactacgcccc 39626

                                                                         
Query: 313   acaacttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaag 372
             |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 39627 acaactacggctacacaactccgataaactcaagcaaggcatggcacgaaagagggcaag 39686

                                                                         
Query: 373   aagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaaca 432
             | || ||||||| ||||  ||||||| ||||||||||| |||||||||||||| | || |
Sbjct: 39687 acgctctactacaaacaactaacaaccactagcatggcagcaaggagcactagaacaaga 39746

                                                                      
Query: 433   agacacaaaatggcatctcacacactatttcagacttagtgaaaattacacctcatg 489
             |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 39747 agacacaaaacggcatctcacacactatttcagactttgtgaaaattacacctcatg 39803

>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
            locus region
          Length = 160897

 Score =  458 bits (231), Expect = e-126
 Identities = 410/467 (87%), Gaps = 2/467 (0%)
 Strand = Plus / Plus

                                                                        
Query: 13   ggttcacgtgattctacgcgtcaatacaagcaataaacacatagagaacatctccaacgg 72
            ||||||||||||||||||||||||  |||||||   |||| |||||||||||||||||||
Sbjct: 5347 ggttcacgtgattctacgcgtcaaggcaagcaacctacacgtagagaacatctccaacgg 5406

                                                                        
Query: 73   agctacggatcaaaagatacaagcatcgcaagatatgatggcatgaaagcaaaatgtgtg 132
            |||||||||||||||| |||  ||| |||||||||||||| |||||| || | |||||||
Sbjct: 5407 agctacggatcaaaagttacgggcaccgcaagatatgatgacatgaatgcgatatgtgtg 5466

                                                                        
Query: 133  caacggcggtcacgagcacttcaaaatattcaaccagcaagagaaaatgtaactacgcga 192
            ||||| |||  |||||| |||||||| |  |||||  |||||||||||| |||||| | |
Sbjct: 5467 caacgacggctacgagcgcttcaaaacaaacaacccacaagagaaaatgaaactactcaa 5526

                                                                        
Query: 193  gattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaacaactacg 252
            | |||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||
Sbjct: 5527 gtttctaagcaagtttcatgtaggacatgaccaaatcggagctacggttcaacatctacg 5586

                                                                        
Query: 253  agcaaaacaagaa-atcttcacaatctgtcaaaaacagccccatggcagtttatacgcct 311
            ||||||||||||| |||   |||||||| ||||||||||| ||| |||  || |||||||
Sbjct: 5587 agcaaaacaagaagatcactacaatctgccaaaaacagccacatagcaacttctacgcct 5646

                                                                        
Query: 312  cacaacttcggctacacaactccgataagctcaagcaaggcatggcacggaagagggcaa 371
            |||||||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||
Sbjct: 5647 cacaacttcgactacacaactccgatacgctcaagcaaggcatggcatggacgagggcaa 5706

                                                                        
Query: 372  gaagcactactacgaacagttaacaacaactagcatggccgcaaggagcactaggaaaac 431
             | ||||||| |||||||  ||||||| ||||||||||| ||||||||||||||||||| 
Sbjct: 5707 aatgcactaccacgaacatctaacaac-actagcatggcagcaaggagcactaggaaaag 5765

                                                           
Query: 432  aagacacaaaatggcatctcacacactatttcagacttagtgaaaat 478
            ||||||| ||| |||||||||||| | ||||||||||||||||||||
Sbjct: 5766 aagacactaaaaggcatctcacacgcgatttcagacttagtgaaaat 5812

>emb|Z17327.1|HVBARE1 H.vulgare DNA for BARE-1 copia-like retroelement
          Length = 13271

 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                        
Query: 420  cactaggaaaacaagacacaaaatggcatctcacacactatttcagacttagtgaaaatt 479
            ||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9909 cactagggaaagaaggcacaaaatggcatctcacacactatttcaaacttagtgaaaatt 9850

                      
Query: 480  acacctcatg 489
            ||||||||||
Sbjct: 9849 acacctcatg 9840

>dbj|AB014756.1| Hordeum vulgare insertion sequence in a copia-like retroelement
            BARE-1, gypsy-type retrotransposon BARE-100 DNA, solo-LTR
            sequence
          Length = 3130

 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                        
Query: 420  cactaggaaaacaagacacaaaatggcatctcacacactatttcagacttagtgaaaatt 479
            ||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2352 cactagggaaagaaggcacaaaatggcatctcacacactatttcaaacttagtgaaaatt 2293

                      
Query: 480  acacctcatg 489
            ||||||||||
Sbjct: 2292 acacctcatg 2283

>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7586

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 191  gagattctaagcaagtttcatgcaggacacgatcaaatcggagctacggttcaac 245
            |||||||||||||||||||||  |||||| | ||||| || || |||||||||||
Sbjct: 1912 gagattctaagcaagtttcatataggacatgctcaaaacgaagttacggttcaac 1858

>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence
          Length = 7674

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 57   agaacatctccaacggagctacgg 80
            ||||||||||||||||||||||||
Sbjct: 2077 agaacatctccaacggagctacgg 2054

>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal
            repeat, complete sequence
          Length = 7575

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 57   agaacatctccaacggagctacgg 80
            ||||||||||||||||||||||||
Sbjct: 2077 agaacatctccaacggagctacgg 2054

>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial
            and complete sequences
          Length = 11820

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 57   agaacatctccaacggagctacgg 80
            ||||||||||||||||||||||||
Sbjct: 2077 agaacatctccaacggagctacgg 2054



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 61   catctccaacggagctacggat 82
            ||||||||||||||||||||||
Sbjct: 9653 catctccaacggagctacggat 9632

>emb|AL033377.2|HS287G14 Human DNA sequence from clone RP1-287G14 on chromosome 6q23.1-24.3
             Contains the 3' end of a novel gene, a novel gene and the
             DKFZP564D0462 (FLJ14937) gene for a novel protein,
             complete sequence
          Length = 135090

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   aaatcttcacaatctgtcaaa 284
             |||||||||||||||||||||
Sbjct: 22112 aaatcttcacaatctgtcaaa 22132

>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence
          Length = 171421

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 425   ggaaaacaagacacaaaatgg 445
             |||||||||||||||||||||
Sbjct: 62976 ggaaaacaagacacaaaatgg 62956

>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     acatctccaacggagctacgg 80
              |||||||||||||||||||||
Sbjct: 325046 acatctccaacggagctacgg 325026

>gb|AC150802.3| Equus caballus clone CH241-121C14, complete sequence
          Length = 57311

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 425   ggaaaacaagacacaaaatgg 445
             |||||||||||||||||||||
Sbjct: 53602 ggaaaacaagacacaaaatgg 53622

>gb|AC133083.3| Mus musculus BAC clone RP24-342G5 from 12, complete sequence
          Length = 191265

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   cagcaagagaaaatgtaacta 187
             |||||||||||||||||||||
Sbjct: 47228 cagcaagagaaaatgtaacta 47208

>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence
          Length = 203284

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   cagcaagagaaaatgtaacta 187
             |||||||||||||||||||||
Sbjct: 14868 cagcaagagaaaatgtaacta 14888

>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 425     ggaaaacaagacacaaaatgg 445
               |||||||||||||||||||||
Sbjct: 1234236 ggaaaacaagacacaaaatgg 1234256



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 425     ggaaaacaagacacaaaatgg 445
               |||||||||||||||||||||
Sbjct: 1076444 ggaaaacaagacacaaaatgg 1076424

>ref|XM_421834.1| PREDICTED: Gallus gallus similar to pyrroline-5-carboxylate synthase
            (LOC423975), mRNA
          Length = 1633

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  cacttcaaaatattcaacca 168
            ||||||||||||||||||||
Sbjct: 1447 cacttcaaaatattcaacca 1428

>emb|AL121930.13|HS1046E21 Human DNA sequence from clone RP5-1046E21 on chromosome 6q14.1-14.3,
             complete sequence
          Length = 135434

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    aataaacacatagagaacat 63
             ||||||||||||||||||||
Sbjct: 81887 aataaacacatagagaacat 81906

>gb|AC129908.4| Homo sapiens chromosome 18, clone RP11-1147P1, complete sequence
          Length = 190809

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    acagccccatggcagtttat 305
              ||||||||||||||||||||
Sbjct: 134585 acagccccatggcagtttat 134566

>emb|CR858334.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2330 (from clone DKFZp459D2330)
          Length = 2539

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 272 acaatctgtcaaaaacagcc 291
           ||||||||||||||||||||
Sbjct: 796 acaatctgtcaaaaacagcc 777

>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23,
             complete sequence
          Length = 74936

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aatacaagcaataaacacat 54
             ||||||||||||||||||||
Sbjct: 74734 aatacaagcaataaacacat 74715

>gb|AC104016.8| Homo sapiens chromosome 11, clone RP11-343J8, complete sequence
          Length = 178534

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    cagccccatggcagtttata 306
              ||||||||||||||||||||
Sbjct: 128823 cagccccatggcagtttata 128804

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     gagcactaggaaaacaagac 436
               ||||||||||||||||||||
Sbjct: 1403095 gagcactaggaaaacaagac 1403114

>gb|AC104448.2| Homo sapiens chromosome 3 clone RP11-24C3, complete sequence
          Length = 155470

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tcatgggttcacgtgattct 27
              ||||||||||||||||||||
Sbjct: 131804 tcatgggttcacgtgattct 131785

>emb|BX255941.9| Zebrafish DNA sequence from clone BUSM1-182C22 in linkage group 23,
             complete sequence
          Length = 107132

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aatacaagcaataaacacat 54
             ||||||||||||||||||||
Sbjct: 78872 aatacaagcaataaacacat 78853

>gb|AC100865.5| Homo sapiens chromosome 11, clone RP11-449L13, complete sequence
          Length = 202683

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   cagccccatggcagtttata 306
             ||||||||||||||||||||
Sbjct: 93822 cagccccatggcagtttata 93803

>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence
          Length = 187201

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    agcaagtttcatgcaggaca 219
              ||||||||||||||||||||
Sbjct: 106113 agcaagtttcatgcaggaca 106094

>gb|AC122318.4| Mus musculus BAC clone RP23-306H2 from 16, complete sequence
          Length = 207909

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    atttcagacttagtgaaaat 478
              ||||||||||||||||||||
Sbjct: 132614 atttcagacttagtgaaaat 132633

>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
             sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    agcaataaacacatagagaa 60
             ||||||||||||||||||||
Sbjct: 61504 agcaataaacacatagagaa 61523

>emb|CR762424.33| Zebrafish DNA sequence from clone RP71-52E8 in linkage group 22,
             complete sequence
          Length = 178229

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   agcaagtttcatgcaggaca 219
             ||||||||||||||||||||
Sbjct: 82015 agcaagtttcatgcaggaca 81996

>gb|AC134772.2| Homo sapiens chromosome 3 clone RP13-794C1, complete sequence
          Length = 177231

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tcatgggttcacgtgattct 27
             ||||||||||||||||||||
Sbjct: 86102 tcatgggttcacgtgattct 86083

>dbj|AP004146.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-754H14, complete
             sequence
          Length = 78318

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 263   gaaatcttcacaatctgtcaaaaa 286
             ||||| ||||||||||||||||||
Sbjct: 23324 gaaatattcacaatctgtcaaaaa 23347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,322,419
Number of Sequences: 3902068
Number of extensions: 4322419
Number of successful extensions: 87837
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87716
Number of HSP's gapped (non-prelim): 110
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)