>ITSN1_RAT (Q9WVE9) Intersectin-1 (EH domain and SH3 domain regulator of|
           endocytosis 1)
          Length = 1217

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -1

Query: 380 LHQ*HSLEMNQQCRSIALRRSEQAHHTLQYTTAPRGSRPIEGRIEQEDGADEEHVHQEHH 201
           L + HS +  Q+ RSI   R +Q     +     +     + R+++ D   +EHV QE  
Sbjct: 609 LREIHSKQQLQKQRSIEAERLKQKEQERKSLELEKQKEEGQRRVQERDKQWQEHVQQEE- 667

Query: 200 GPQAQGRPPRP 168
               Q RP +P
Sbjct: 668 ----QQRPRKP 674

>BIRC6_HUMAN (Q9NR09) Baculoviral IAP repeat-containing protein 6|
            (Ubiquitin-conjugating BIR-domain enzyme apollon)
          Length = 4829

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 263  IEGRIEQEDGADEEHVHQEHHGPQAQ 186
            +E + EQ+     +H+HQ+HHG  AQ
Sbjct: 1019 VEVQQEQQQRRHPQHLHQQHHGDAAQ 1044

>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/67 (19%), Positives = 28/67 (41%)
 Frame = -1

Query: 377 HQ*HSLEMNQQCRSIALRRSEQAHHTLQYTTAPRGSRPIEGRIEQEDGADEEHVHQEHHG 198
           H  H  +  QQ    + ++ + AH  L +       + +  + +Q+    ++H H + +G
Sbjct: 556 HSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNG 615

Query: 197 PQAQGRP 177
           P     P
Sbjct: 616 PHPHSHP 622

>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 13/67 (19%), Positives = 28/67 (41%)
 Frame = -1

Query: 377 HQ*HSLEMNQQCRSIALRRSEQAHHTLQYTTAPRGSRPIEGRIEQEDGADEEHVHQEHHG 198
           H  H  +  QQ    + ++ + AH  L +       + +  + +Q+    ++H H + +G
Sbjct: 610 HSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLNG 669

Query: 197 PQAQGRP 177
           P     P
Sbjct: 670 PHPHSHP 676

>TIM_RAT (Q9Z2Y1) Timeless homolog (rTIM) (Timeless-like protein) (rTLP)|
          Length = 1205

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 287 TAPRGSRPIEGRIEQEDGADEEHVHQE 207
           T PR   P+EG  E+ED  +EE   +E
Sbjct: 649 TLPRQQEPVEGDAEEEDEEEEEEEEEE 675

>CHEB_TREDE (P62646) Chemotaxis response regulator protein-glutamate|
           methylesterase (EC 3.1.1.61)
          Length = 372

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 38  PEHESRDAGSPPHSRLTIVAVGCDRGGPNGV 130
           P+ E +      H  + I+A+G   GGPN +
Sbjct: 167 PQKEEKPTPQREHGNIQIIAIGISTGGPNAL 197

>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
 Frame = -1

Query: 404 HASHHWLALHQ*HSLEMNQQCRSIALRRSEQAHHTLQYTTAPRGSRPIEGRIEQEDGADE 225
           H  HH    H  H  +   Q          QAHH   +      +  +  ++  +D A  
Sbjct: 61  HEHHHHHHHHHHHQHQAPHQA-------PHQAHHHHHHGEVNHQAPQVHQQVHGQDQAHH 113

Query: 224 EHVHQEH--HGPQAQGRPPRP 168
            H H  H  H  Q QG    P
Sbjct: 114 HHHHHHHHLHPQQPQGTVANP 134

>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7|
           (EC 2.7.11.22)
          Length = 730

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
 Frame = -1

Query: 368 HSLEMNQQCRSIALRR----SEQAHHTLQYTTAPRGSRPIEGRIEQEDGADEEHVHQEHH 201
           H +   +Q +S  L R    S  + H+++ T+ PR          + +G+   H H  H 
Sbjct: 625 HEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPTQPSTTTTKSNGSSNHHHHHHHS 684

Query: 200 GPQAQGRPP 174
              A   PP
Sbjct: 685 HHHASSLPP 693

>LNK_RAT (P50745) Lymphocyte-specific adapter protein Lnk (Signal|
           transduction protein Lnk) (Lymphocyte adapter protein)
          Length = 368

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 281 EPWYIGVYGVLVLIALAQYFYTAGSSPGYVID 376
           +PW +GV G +  + +    +  G+SPG ++D
Sbjct: 73  DPWSLGVLGHVAPLRVTTTIFLPGASPGVMLD 104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,612,268
Number of Sequences: 219361
Number of extensions: 1077493
Number of successful extensions: 3483
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3467
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)