ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5m18 |
|---|---|
| Clone Library Name | barley_pub |
>PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 7) (20S proteasome beta subunit G-1) (Proteasome component H) Length = 246 Score = 284 bits (726), Expect = 1e-76 Identities = 134/190 (70%), Positives = 158/190 (83%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++A+KYKDGV+MA D G SYGSTLRYK++ER+K +GKHSL+G SGE SDFQEILRYLDEL Sbjct: 34 IVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDEL 93 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 TLND+MWDDGNSLGPKEIH YLTRVMYNRRNKF+PLWN+ + YLGMV+ Sbjct: 94 TLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNT----LVLGGVKNGKSYLGMVS 149 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 542 MIG FE++H+ATGFGNH+A PILR EW D++FE+ VKL+EKC+ VLLYRDRS+INK Q Sbjct: 150 MIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQ 209 Query: 543 IAKITTEGST 572 IAKIT EG T Sbjct: 210 IAKITEEGVT 219
>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 242 Score = 154 bits (390), Expect = 1e-37 Identities = 74/190 (38%), Positives = 126/190 (66%), Gaps = 2/190 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ +K+ GVI+A D SYGS R++++ RI +V +++++G SG+++D+Q + + +D++ Sbjct: 34 VLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQM 93 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 +++ + DG++ PK IH++LTRVMYNRR+K +PLWN+ E +LG V+ Sbjct: 94 VIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNT----VVIGGFYNGESFLGYVD 149 Query: 363 MIGTHFEENHIATGFGNHMAIPILR--GEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 +G +E IATGFG ++A P+LR E + ++ EEA +L+++C+ VL YRD S N+ Sbjct: 150 KLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNR 209 Query: 537 FQIAKITTEG 566 F+I +T G Sbjct: 210 FEITTVTESG 219
>PSB4_SCHPO (Q9USQ9) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 262 Score = 154 bits (389), Expect = 2e-37 Identities = 79/192 (41%), Positives = 118/192 (61%), Gaps = 4/192 (2%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+A+K+ DGV++A D ASYGS R+ VER+ +VG ++++G G+ SD+Q+I R L++L Sbjct: 46 VLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKL 105 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 + + + DG +L P IH YL++V+Y RRNK DP WN E Y+ + Sbjct: 106 EIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQ--LIVAGVDGENKEPYVAFAD 163 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWRED----MTFEEAVKLIEKCLLVLLYRDRSSI 530 + GT + IATGF H+A+P+LR +D ++ E A I++C+ VL YRD S+ Sbjct: 164 LRGTTYSAPAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSL 223 Query: 531 NKFQIAKITTEG 566 NKF +A IT EG Sbjct: 224 NKFSVATITPEG 235
>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (RN3) Length = 263 Score = 150 bits (380), Expect = 2e-36 Identities = 72/190 (37%), Positives = 124/190 (65%), Gaps = 2/190 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ +K+ GV++A D SYGS R++++ RI V +++G SG+++DFQ + + L ++ Sbjct: 55 VLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQM 114 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 +++ ++ DG+S P+ IH++LTR MY+RR+K +PLWN+ E +LG V+ Sbjct: 115 VIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----KVIGGYAGGESFLGYVD 170 Query: 363 MIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 M+G +E +ATG+G ++A P+LR E + ++ EA +L+E+C+ VL YRD S N+ Sbjct: 171 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNR 230 Query: 537 FQIAKITTEG 566 FQ+A +T +G Sbjct: 231 FQVATVTEKG 240
>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) Length = 264 Score = 150 bits (380), Expect = 2e-36 Identities = 73/190 (38%), Positives = 123/190 (64%), Gaps = 2/190 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ +K+ GV++A D SYGS R++++ RI V +++G SG+++DFQ + + L ++ Sbjct: 56 VLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQM 115 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 +++ + DG+S P+ IH++LTR MY+RR+K +PLWN+ E +LG V+ Sbjct: 116 VIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----MVIGGYADGESFLGYVD 171 Query: 363 MIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 M+G +E +ATG+G ++A P+LR E + ++ EA +L+E+C+ VL YRD S N+ Sbjct: 172 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNR 231 Query: 537 FQIAKITTEG 566 FQIA +T +G Sbjct: 232 FQIATVTEKG 241
>PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (HSN3) (HsBPROS26) Length = 264 Score = 149 bits (376), Expect = 6e-36 Identities = 72/190 (37%), Positives = 122/190 (64%), Gaps = 2/190 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ +K++ GV++A D SYGS R++++ RI V +++G SG+++DFQ + + L ++ Sbjct: 56 VLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQM 115 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 +++ + DG+S P+ IH++LTR MY+RR+K +PLWN+ E +LG V+ Sbjct: 116 VIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNT----MVIGGYADGESFLGYVD 171 Query: 363 MIGTHFEENHIATGFGNHMAIPILRG--EWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 M+G +E +ATG+G ++A P+LR E + ++ EA L+E+C+ VL YRD S N+ Sbjct: 172 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNR 231 Query: 537 FQIAKITTEG 566 FQ A +T +G Sbjct: 232 FQTATVTEKG 241
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 137 bits (344), Expect = 3e-32 Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 2/190 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ ++Y GV++A DT SYGS RY+++ER+ +V K+ L+GGSG+F+D Q I R +D+ Sbjct: 60 VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQK 119 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 + D DD + PK + +++TRV+YNRR++ +PL+ YL V+ Sbjct: 120 MIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLY---IDVVVGGVDNEGTPYLANVD 176 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFE--EAVKLIEKCLLVLLYRDRSSINK 536 + G +E+ +ATGF H+A+P++R + +D F EA +LI C+ VL YRD +I++ Sbjct: 177 LRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQ 236 Query: 537 FQIAKITTEG 566 + + + G Sbjct: 237 YTVGVCSVNG 246
>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit| PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4) Length = 266 Score = 120 bits (300), Expect = 4e-27 Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 9/193 (4%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 VI+MKY +GVI+A D SYGS LR+ VER+ VG ++++G SG+ SD Q I R L +L Sbjct: 44 VISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDL 103 Query: 183 ----TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 350 ++ + D +L P I YL VMY RR+K +PLWN+ +++L Sbjct: 104 VTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNA---IIVAGVQSNGDQFL 160 Query: 351 GMVNMIGTHFEENHIATGFGNHMAIPILRG--EWREDM---TFEEAVKLIEKCLLVLLYR 515 VN++G + +ATGFG HMA P+LR + D+ T + A + I + VL YR Sbjct: 161 RYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYR 220 Query: 516 DRSSINKFQIAKI 554 D S F +A I Sbjct: 221 DARSSRNFSLAII 233
>PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 154 Score = 97.4 bits (241), Expect = 2e-20 Identities = 40/99 (40%), Positives = 69/99 (69%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 V+ +K++ GV++A D SYGS R++++ RI V +++G SG+++DFQ + + L ++ Sbjct: 56 VLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQM 115 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNS 299 +++ + DG+S PK IH++LTR MYNRR K +PLW + Sbjct: 116 VIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 74.3 bits (181), Expect = 2e-13 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 1/188 (0%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 + + K+GV++A DT AS G+ + K+V +I ++ +H I G+G+ D ++R L + Sbjct: 14 VGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL-KAE 72 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YLGMVN 362 N + G + K + L ++ +K+ P DEK L V+ Sbjct: 73 ANLYKSTVGKEMSVKALATLLANILNG--SKYFPYLG------WFLVGGYDEKPRLFSVD 124 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 542 M+G E+N+ A G G A IL E+RE+M+ + +KL K + V + RD + + Sbjct: 125 MVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLL 184 Query: 543 IAKITTEG 566 + IT +G Sbjct: 185 VVTITKDG 192
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 69.3 bits (168), Expect = 7e-12 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 1/183 (0%) Frame = +3 Query: 21 KDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHM 200 KDGV++A D AS G+ + ++V +I ++ +H I G+G+ D ++R L + Sbjct: 19 KDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL-RAEAKLYY 77 Query: 201 WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YLGMVNMIGTH 377 G + K + L +M + W DEK L V+M+G Sbjct: 78 SQSGKRMSVKALATLLANIMNGAKYFPYLAW--------FLVGGYDEKPKLYSVDMVGGI 129 Query: 378 FEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKIT 557 E+ + G G A IL E+++++T EE +KL K + + RD S + + IT Sbjct: 130 TEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTIT 189 Query: 558 TEG 566 EG Sbjct: 190 KEG 192
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 67.0 bits (162), Expect = 4e-11 Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 1/182 (0%) Frame = +3 Query: 24 DGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMW 203 DGV++A D AS G+ + K+V +I ++ +H I G+G+ D ++R L + Sbjct: 20 DGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL-RAEAKLYYA 78 Query: 204 DDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK-YLGMVNMIGTHF 380 G + K + L ++ R W DEK L V+M+G Sbjct: 79 QSGKRMSVKALATLLANMLNGARMLPYLAW--------FLVGGFDEKPRLYSVDMMGGIT 130 Query: 381 EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITT 560 E+ ++A G G A +L E+RED+ E +K+ + + + RD S + + IT Sbjct: 131 EDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITE 190 Query: 561 EG 566 EG Sbjct: 191 EG 192
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 59.3 bits (142), Expect = 8e-09 Identities = 46/187 (24%), Positives = 84/187 (44%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 + ++ DGVI+A D AS G + K V ++ + I +G +D Q ++ ++ Sbjct: 18 VGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQ----FIYDVL 73 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNM 365 N + ++ GP I TR+ N D+ L ++ Sbjct: 74 KNIYHYNSITKYGPISIKGIATRLA----NVLSATKYFPYIVQILIGGYDDQPRLFNLDY 129 Query: 366 IGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQI 545 +G EEN++ATG G+ +A+ +L E+ MT +EA L ++ + + RD + + Sbjct: 130 LGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 189 Query: 546 AKITTEG 566 AKI ++G Sbjct: 190 AKIHSKG 196
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 50.8 bits (120), Expect = 3e-06 Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 1/182 (0%) Frame = +3 Query: 24 DGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYL-DELTLNDHM 200 D VI+A D AS G+ + K +++ ++ + + +G D Q I+R L E L + Sbjct: 16 DAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKL--YK 73 Query: 201 WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHF 380 G ++ P L+ ++++ R P K + + G + Sbjct: 74 MRTGRNIPPLACATLLSNILHSSR--MFPFLTQIIIGGYDLLEGA--KLFSLDPLGGMNE 129 Query: 381 EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITT 560 E+ ATG G+ +A +L + DM+ EE +KL L + RD S N +A IT Sbjct: 130 EKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITK 189 Query: 561 EG 566 +G Sbjct: 190 DG 191
>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit beta-4) Length = 212 Score = 49.3 bits (116), Expect = 8e-06 Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 1/190 (0%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 VI + +D ++A DT A + +++ + H L+G SGE D + ++ + Sbjct: 4 VIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQK- 62 Query: 183 TLNDHMWDDGNSLG-PKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMV 359 N H++ N++ A TR + +P + + Y + Sbjct: 63 --NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYY---I 117 Query: 360 NMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 539 + I T + A G+G++ + ++ +R DM+ EEAV L++KC+ + R + F Sbjct: 118 DYIATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNF 177 Query: 540 QIAKITTEGS 569 I + EG+ Sbjct: 178 IIKIVDKEGA 187
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 48.9 bits (115), Expect = 1e-05 Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 3/189 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLD-EL 182 + + KDGV+ A + AS G+ + +K+ ++I ++ +H +G +D Q +++YL E Sbjct: 13 VGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEA 72 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L + + + + A ++++ R F P DE + + Sbjct: 73 AL--YRMRNSEKISIEAAAALAANILHSSR--FYPF------IVQTLLGGVDENGAKIYS 122 Query: 363 M--IGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 + G + ++TG G+ +A +L + +++ +EAV + + + + RD S N Sbjct: 123 LDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNG 182 Query: 537 FQIAKITTE 563 +A +T E Sbjct: 183 ILVATVTEE 191
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 48.5 bits (114), Expect = 1e-05 Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 4/194 (2%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 +I + Y GV++ D+ S G + ++ ++I ++ + + SG +D Q + Y+ Sbjct: 15 IIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV-RY 73 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM-- 356 L+ H G K + + YN +N +KY G Sbjct: 74 FLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQ----------TGLIVGGWDKYEGGKI 123 Query: 357 --VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 + + GT E+ G G+ W+++MT EEA +L+ K + + + RD +S Sbjct: 124 YGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASG 183 Query: 531 NKFQIAKITTEGST 572 + I +EG T Sbjct: 184 GVVRTVIINSEGVT 197
>PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 224 Score = 48.5 bits (114), Expect = 1e-05 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 3/162 (1%) Frame = +3 Query: 21 KDGVIMACDTGASYGSTLRYKSVE-RIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDH 197 KD VI+A D GA S +R KS E ++K +G H + SGE D Y++ N Sbjct: 10 KDYVILASDMGAGR-SIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIER---NMR 65 Query: 198 MWDDGNS--LGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIG 371 +++ N L P A++ R + P + + +L ++ +G Sbjct: 66 LYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPY--AVNLLLGGFDTTTSKPHLYWIDYLG 123 Query: 372 THFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 497 T + A G G ++++ + W EDM +E V L+ KC+ Sbjct: 124 TKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCI 165
>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-1) (Proteasome component GB) Length = 204 Score = 47.4 bits (111), Expect = 3e-05 Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 2/181 (1%) Frame = +3 Query: 33 IMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDG 212 I+A DT A + L + ++I + H L+ SGE D + Y+ + N ++ Sbjct: 14 IVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQK---NVSLYKFR 70 Query: 213 NSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM--VNMIGTHFEE 386 N + A + R L + DE + ++ I T + Sbjct: 71 NGIPLTTAAA----ANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKV 126 Query: 387 NHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEG 566 + A G+G++ ++ + +R DM+ EEA++L++KC+L + R + F I + +G Sbjct: 127 DKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIKIVDKDG 186 Query: 567 S 569 + Sbjct: 187 A 187
>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-2) (Proteasome component GA) Length = 199 Score = 47.0 bits (110), Expect = 4e-05 Identities = 40/179 (22%), Positives = 79/179 (44%) Frame = +3 Query: 33 IMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDG 212 I+A DT A + L ++I + H L+ SGE D + Y+ + ++ + + +G Sbjct: 14 IVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQK-NVSLYQFRNG 72 Query: 213 NSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHFEENH 392 L A TR + +P + Y ++ I T + + Sbjct: 73 IPLSTAAA-ANFTRGELATALRKNPYSVNILMAGYDKEAGASLYY---IDYIATLHKVDK 128 Query: 393 IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEGS 569 A G+G++ ++ + +R DM+ EEA++L++KC+L + R + F I + +G+ Sbjct: 129 GAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIKIVDKDGA 187
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 47.0 bits (110), Expect = 4e-05 Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 4/194 (2%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 +I + Y GV++ D+ S G + ++ ++I ++ + + SG +D Q + Y+ Sbjct: 16 IIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV-RY 74 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVM-YNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMV 359 L+ H G K + A LTR++ YN +++ D+ G + Sbjct: 75 FLHQHTIQLGQPATVK-VAANLTRLLSYNNKDRLQ---------TGMIIGGWDKYEGGKI 124 Query: 360 NMI---GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 I GT E+ G G+ W+E MT EEA KL+ + + + RD +S Sbjct: 125 YGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASG 184 Query: 531 NKFQIAKITTEGST 572 + I +G+T Sbjct: 185 GVVRTVTINKDGAT 198
>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit| C11) (Proteinase YSCE subunit 11) (Multicatalytic endopeptidase complex subunit C11) Length = 198 Score = 46.6 bits (109), Expect = 5e-05 Identities = 31/165 (18%), Positives = 73/165 (44%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++ ++ +D VI+A + G ++ S ++ +++ H+L+ +GE D + Y+ + Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI-QA 62 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 + + + L P+ + +++ + + P + E Y ++ Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELY--QID 120 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCL 497 +GT E + A G+ +L +R DMT EE + L++ C+ Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCV 165
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 46.6 bits (109), Expect = 5e-05 Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 2/188 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 + + KDGV+MA + A+ G+ + K+ ++I ++ + +G D Q + R + Sbjct: 15 VGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIK--- 71 Query: 186 LNDHMWDDGNSLGPK-EIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 + ++++ P A LT + N F L + K + ++ Sbjct: 72 IEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYL-----VQLLIGGIDSEGKSIYSID 126 Query: 363 MIGTHFEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 539 IG EE I ATG G+ A +L + ++ +EAV+L + + + RD +S + Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGI 186 Query: 540 QIAKITTE 563 + KIT + Sbjct: 187 DVVKITED 194
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 46.2 bits (108), Expect = 7e-05 Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 3/183 (1%) Frame = +3 Query: 24 DGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMW 203 DG+++A + A+ G + K+ +++ ++ + +G D Q+++R + + M Sbjct: 19 DGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMR 78 Query: 204 DDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNM--IGTH 377 D S+ K I ++ + RN++ P+ D+ G+ ++ +G Sbjct: 79 RD-ESMTIKGITTLMSNFL--SRNRYYPMM------VQLLIGGVDKNGPGIYSLDAMGGS 129 Query: 378 FEENHI-ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 554 EE I ATG G+ MA +L ++RE+MT +E + L + + RD +S + I Sbjct: 130 IEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVI 189 Query: 555 TTE 563 T E Sbjct: 190 TKE 192
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 45.8 bits (107), Expect = 9e-05 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 2/189 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A +K GV++A D+ AS G + +SV++I E+ + L +G +D Q R L + Sbjct: 59 LAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG-IK 117 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM--V 359 H + + L ++YN R DE G+ V Sbjct: 118 CRLHELANKRRISVTGASKLLANILYNYRGM--------GLSVGTMIAGWDETGPGLYYV 169 Query: 360 NMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 539 + G + + G G+ A +L ++ DMT EEA +L + + YRD +S Sbjct: 170 DSEGGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVV 229 Query: 540 QIAKITTEG 566 + + +G Sbjct: 230 SVYHVGPDG 238
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 45.1 bits (105), Expect = 1e-04 Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 8/190 (4%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A K++ GVI+A D+ AS GS + V ++ E+ + L SG +D Q Y + L Sbjct: 76 LAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQ----YWERLL 131 Query: 186 LND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM 356 + + +G + L+ +M R D+K G+ Sbjct: 132 AKECRLYYLRNGERISVSAASKLLSNMMLQYRGM--------GLSMGSMICGWDKKGPGL 183 Query: 357 --VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS- 527 V+ GT +TG GN A ++ +R+D++ EEA L + ++ +RD S Sbjct: 184 YYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSG 243 Query: 528 --INKFQIAK 551 +N + + K Sbjct: 244 GVVNMYHMKK 253
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 44.7 bits (104), Expect = 2e-04 Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 3/191 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + A++YKDGVI+A D+ + G+ + + +++ ++ + SG +D Q + L + Sbjct: 27 ITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLL-KY 85 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L+ + G+ + + Y +N DEK G V Sbjct: 86 YLSMYRIQFGHDPSVHTAATLASEMCYQNKNML---------SAGLIVAGYDEKTGGDVY 136 Query: 363 MI---GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 533 I G+ ++ G G+ +RE+MT EEAV+ ++ + + + RD SS Sbjct: 137 SIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGG 196 Query: 534 KFQIAKITTEG 566 ++ + +G Sbjct: 197 TIRMVILNKDG 207
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 43.5 bits (101), Expect = 4e-04 Identities = 32/175 (18%), Positives = 76/175 (43%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++ +K+ +GV++A DT ++ G + K+ ++ + G+G +D + + + + Sbjct: 32 IVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGS- 90 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 N + S P+ + A +++ K+ +L ++ Sbjct: 91 --NIELHSLYTSREPRVVSAL--QMLKQHLFKYQ---GHIGAYLIVAGVDPTGSHLFSIH 143 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 527 G+ +++ G G+ A+ +L W++D+T EEA+KL + ++ D S Sbjct: 144 AHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGS 198
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 42.4 bits (98), Expect = 0.001 Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 2/191 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A +K GV++A D+ AS G + +SV++I E+ + L +G +D Q R L + Sbjct: 61 LAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG-IK 119 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM--V 359 H + + L ++Y+ R DE G+ V Sbjct: 120 CRLHELANKRRISVSGASKLLANMLYSYRGM--------GLSVGTMIAGWDETGPGLYYV 171 Query: 360 NMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 539 + G + + + G G+ A +L ++ DM+ EEA +L + + +RD +S Sbjct: 172 DNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVA 231 Query: 540 QIAKITTEGST 572 + + EG T Sbjct: 232 SVYHVGPEGWT 242
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 42.0 bits (97), Expect = 0.001 Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 2/191 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A +K+GV++A D+ AS G + +SV++I E+ + L +G +D Q R L + Sbjct: 61 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLG-IK 119 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM--V 359 H + + L ++Y+ R DE G+ V Sbjct: 120 CRLHELANKRRISVSGASKLLANMLYSYRGM--------GLSVGTMIAGWDETGPGLYYV 171 Query: 360 NMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKF 539 + G + + + G G+ A +L ++ DM+ EEA +L + + +RD +S Sbjct: 172 DNEGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVA 231 Query: 540 QIAKITTEGST 572 + + +G T Sbjct: 232 SVYHVGPQGWT 242
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 41.2 bits (95), Expect = 0.002 Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 5/179 (2%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A K++ GVI A D+ AS GS + V ++ E+ + L SG +D Q Y + L Sbjct: 76 LAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQ----YWERLL 131 Query: 186 LND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM 356 + + +G + L+ +M R D+K G+ Sbjct: 132 AKECRLYYLRNGERISVSAASKLLSNMMCQYRGM--------GLSMGSMICGWDKKGPGL 183 Query: 357 --VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 527 V+ GT N +TG GN A ++ +R +++ EEA L + + +RD S Sbjct: 184 YYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYS 242
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 40.8 bits (94), Expect = 0.003 Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 10/195 (5%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++ + +KDGVI+ DT A+ G + K+ E+I + + G+G +D + + + Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS- 100 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L H + G +T + +++ F + LG V+ Sbjct: 101 QLRLHRYQTGRD------SRVITALTLLKKHLFSYQGHVSAAL-----------VLGGVD 143 Query: 363 MIGTHFEENH----------IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 512 + G H + G G+ A+ + +++E +T +E +KL+ + + ++ Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIF 203 Query: 513 RDRSSINKFQIAKIT 557 D S + I IT Sbjct: 204 NDLGSGSNVDICVIT 218
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 40.8 bits (94), Expect = 0.003 Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 5/179 (2%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A K++ GVI+A D+ A+ GS + + ++ E+ + L SG +D Q Y + L Sbjct: 76 LAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQ----YWERLL 131 Query: 186 LND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM 356 + + +G + L+ +M R D+K G+ Sbjct: 132 AKECRLYYLRNGERISVSAASKLLSNMMLQYRGM--------GLSMGSMICGWDKKGPGL 183 Query: 357 --VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 527 V+ GT +TG GN A ++ +R+D++ EEA L + + +RD S Sbjct: 184 YYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYS 242
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 40.8 bits (94), Expect = 0.003 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 10/195 (5%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++ + +KDGVI+ DT A+ G + K+ E+I + + G+G +D + + + Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSS- 100 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L H + G L + +++ + LG V+ Sbjct: 101 QLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSA-----------------ALVLGGVD 143 Query: 363 MIGTHFEENH----------IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 512 + G H + G G+ A+ + +++E +T +E +KL+ + + ++ Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIF 203 Query: 513 RDRSSINKFQIAKIT 557 D S + I IT Sbjct: 204 NDLGSGSNVDICVIT 218
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 40.4 bits (93), Expect = 0.004 Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 5/191 (2%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 + +K KDGV++A + + + +S E+I ++ H SG +D + ++ L Sbjct: 40 VGVKCKDGVVLAVEKRIT-SRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRA-RLE 97 Query: 186 LNDHMWDDGNSLGPKEIHAYLTRV-----MYNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 350 H G P + + ++ M+ + P D+ L Sbjct: 98 AQIHRLTYGE---PAPLAVIVKKICDLKQMHTQYGGVRPF-----GAALLMAGVNDKPEL 149 Query: 351 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 + G +F +A G G + A+ I ++R+DMT +EA+KL L + ++ S Sbjct: 150 YETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSA 207 Query: 531 NKFQIAKITTE 563 ++A IT + Sbjct: 208 ENIEVAVITVK 218
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 39.7 bits (91), Expect = 0.006 Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 10/195 (5%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ L Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQLISS 104 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L H G L RV+ R L+ LG V+ Sbjct: 105 NLELHSLTTGR----------LPRVVTANRMLKQMLFRYQGYIGAALV-------LGGVD 147 Query: 363 MIGTHFEE----------NHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 512 + G H ++ G G+ A+ + ++R DM EEA KL+ + + ++ Sbjct: 148 VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIF 207 Query: 513 RDRSSINKFQIAKIT 557 D S + + I+ Sbjct: 208 NDLGSGSNIDLCVIS 222
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 39.7 bits (91), Expect = 0.006 Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 10/195 (5%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ L Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQLISS 104 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L H G L RV+ R L+ LG V+ Sbjct: 105 NLELHSLTTGR----------LPRVVTANRMLKQMLFRYQGYIGAALV-------LGGVD 147 Query: 363 MIGTHFEE----------NHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 512 + G H ++ G G+ A+ + ++R DM EEA KL+ + + ++ Sbjct: 148 VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIF 207 Query: 513 RDRSSINKFQIAKIT 557 D S + + I+ Sbjct: 208 NDLGSGSNIDLCVIS 222
>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 247 Score = 39.3 bits (90), Expect = 0.008 Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 3/190 (1%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 I +K KD V++ + + + SVE++ E+ H SG +D + I+ + T Sbjct: 38 IGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQT 96 Query: 186 LNDHM-WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEK--YLGM 356 N +D+ + + + + S DE L Sbjct: 97 QNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYH 156 Query: 357 VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 GT+F A G G+ A L E+ +DMT EEA LI K L ++ S N Sbjct: 157 SEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKN- 215 Query: 537 FQIAKITTEG 566 Q+AK+T EG Sbjct: 216 VQLAKVTAEG 225
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 38.9 bits (89), Expect = 0.010 Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 5/179 (2%) Frame = +3 Query: 6 IAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELT 185 +A K++ GVI+A D+ A+ G+ + V ++ E+ L SG +D Q Y + L Sbjct: 76 LAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQ----YWERLL 131 Query: 186 LND---HMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGM 356 + + +G + L+ ++Y R D+K G+ Sbjct: 132 AKECRLYYLRNGERISVSAASKLLSNMVYQYRGM--------DLSMGSMICGWDKKGPGL 183 Query: 357 --VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSS 527 V+ GT N +TG G+ A ++ ++ ++ EEA +L + + +RD S Sbjct: 184 YYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYS 242
>PSB2_NEUCR (Q9P6U7) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 203 Score = 38.5 bits (88), Expect = 0.014 Identities = 34/182 (18%), Positives = 69/182 (37%) Frame = +3 Query: 21 KDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHM 200 KD I+A A G+T+ S ++ + + KH+L+ SGE D + Y + + Sbjct: 10 KDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEY-TQANAQLYS 68 Query: 201 WDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHF 380 +G L P + ++ + P + + L ++ + + Sbjct: 69 MRNGTDLSPSALANFVRGELATSLRSRKPY--NVNLLLGGVDPITHKPSLYWLDYLASLA 126 Query: 381 EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITT 560 + + A G+ + + IL D+T + +KL+ C L R + +T Sbjct: 127 KVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTK 186 Query: 561 EG 566 +G Sbjct: 187 DG 188
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 38.1 bits (87), Expect = 0.018 Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 10/195 (5%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + + YKDG+++ DT A+ G + K+ +I + + G+G +D ++ L Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAAD-TDMTTQLISS 104 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 L H G L RV+ R L+ LG V+ Sbjct: 105 NLELHSLSTGR----------LPRVVTANRMLKQMLFRYQGYIGAAL-------VLGGVD 147 Query: 363 MIGTHF----------EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLY 512 + G H + ++ G G+ A+ + ++R DM EEA L+ + + ++ Sbjct: 148 VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIF 207 Query: 513 RDRSSINKFQIAKIT 557 D S + + I+ Sbjct: 208 NDLGSGSNIDLCVIS 222
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 36.6 bits (83), Expect = 0.052 Identities = 36/192 (18%), Positives = 77/192 (40%), Gaps = 4/192 (2%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++ +K D V++A DT + +I + +++ G+ D +++ D + Sbjct: 6 ILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGD---TIQFTDFI 62 Query: 183 TLNDHMW--DDGNSLGPKEIHAYLTRVM--YNRRNKFDPLWNSXXXXXXXXXXXXDEKYL 350 + N H++ G L K + + + Y R N + L Sbjct: 63 SKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNT-----RYQVAMLLAGYDAVEGPDL 117 Query: 351 GMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 ++ G NH G+G+ IL+ W ++ E+A L++KC+L + R + Sbjct: 118 HYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQ 177 Query: 531 NKFQIAKITTEG 566 F++ + ++G Sbjct: 178 RNFEVYVVDSKG 189
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 36.6 bits (83), Expect = 0.052 Identities = 40/189 (21%), Positives = 73/189 (38%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + + ++DGVI+ DT A+ S + KS E+I + G+G +D + R Sbjct: 42 IAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTR----- 96 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 M S G + A +TR++ ++ + L V+ Sbjct: 97 MAASKMELHALSTGREPRVATVTRILRQTLFRYQ---GHVGASLVVGGVDLNGPQLYEVH 153 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 542 G++ A G G A+ +L ++ +MT E A +L+ + + + D S Sbjct: 154 PHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVD 213 Query: 543 IAKITTEGS 569 IT G+ Sbjct: 214 ACVITAGGA 222
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 36.2 bits (82), Expect = 0.068 Identities = 20/66 (30%), Positives = 34/66 (51%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 G E A G G A+ + E+REDMT +EA++L + L R+ ++ + +IA Sbjct: 157 GALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYE-ASREETTADNLEIA 215 Query: 549 KITTEG 566 + +G Sbjct: 216 VVDKQG 221
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 35.8 bits (81), Expect = 0.089 Identities = 42/189 (22%), Positives = 75/189 (39%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 + + ++DGVI+ DT A+ S + KS E+I + G+G +D + R Sbjct: 42 IAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTR----- 96 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 + M S G + A +TR++ R+ F + + G V+ Sbjct: 97 MVASKMELHALSTGREPRVATVTRIL--RQTLFRYQGHVGASLIVGGVDLTGPQLYG-VH 153 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQ 542 G++ A G G A+ +L ++ +MT E A L+ + + + D S Sbjct: 154 PHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVD 213 Query: 543 IAKITTEGS 569 IT G+ Sbjct: 214 ACVITKTGA 222
>PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 35.4 bits (80), Expect = 0.12 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 G +F +A G G + A+ I ++R+DM E+A+KL L + + S + ++A Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTM--ENPSADNIEVA 213 Query: 549 KITTE 563 IT + Sbjct: 214 VITVK 218
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 35.0 bits (79), Expect = 0.15 Identities = 19/65 (29%), Positives = 35/65 (53%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 G +F +A G G + A+ I ++++DM+ EEA+KL L + ++ S ++A Sbjct: 156 GAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVA 213 Query: 549 KITTE 563 IT + Sbjct: 214 IITVK 218
>PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| subunit beta 4) Length = 199 Score = 34.7 bits (78), Expect = 0.20 Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 4/192 (2%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGA-SYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDE 179 ++ + ++ VI+A D +YG+ L ++ +GK + GE D + ++ D Sbjct: 4 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGD---VAQFGDW 60 Query: 180 LTLNDHMWD--DGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLG 353 N ++ +G + P H ++ R + D + D+ +LG Sbjct: 61 TKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHY--TVDVLIGGYDDKEDKAFLG 118 Query: 354 MVNMIGTHF-EENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 V+ + ++ ++ GF I+ E+++DMT E + L+ KC+ R ++I Sbjct: 119 SVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANI 178 Query: 531 NKFQIAKITTEG 566 +++ I +G Sbjct: 179 PGYKVVIIDKKG 190
>PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome subunit beta-4) Length = 206 Score = 34.3 bits (77), Expect = 0.26 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 6/165 (3%) Frame = +3 Query: 90 ERIKEVGKHSLIGGSGEFSDFQEILRYLDELTLNDHMWDDGNSLGPKEIHAYLTRVMYNR 269 ++I E+ H ++ +GE + Y+ M + G + +++ + Sbjct: 34 DKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGA 93 Query: 270 RNKFDPLW--NSXXXXXXXXXXXXDE----KYLGMVNMIGTHFEENHIATGFGNHMAIPI 431 D L+ N D+ +L ++ +GT E + G+G + Sbjct: 94 LRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAM 153 Query: 432 LRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTEG 566 L WR ++T +E V+L++KC + R S N F + +G Sbjct: 154 LDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 258 Score = 33.1 bits (74), Expect = 0.58 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 509 G +F IA G G +A + +R DM+ EEA KL K L ++ Sbjct: 160 GQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAII 206
>FDXG_HAEIN (P46448) Formate dehydrogenase major subunit (EC 1.2.1.2) (Formate| dehydrogenase alpha subunit) (FDH alpha subunit) Length = 1028 Score = 32.0 bits (71), Expect = 1.3 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -3 Query: 279 TYCACCTLLLSGRHGFPWGPMSSHHPTYDRSKLIH----PDSAKSPG 151 TYCA +L G P+ +SSH T RSKL H PD S G Sbjct: 51 TYCAVSCGMLLYSTGKPYNSLSSHTGTNTRSKLFHIEGDPDHPVSRG 97
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome| component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Fragment) Length = 104 Score = 31.6 bits (70), Expect = 1.7 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +3 Query: 336 DEKYLGM--VNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLL 509 D+K G+ V+ GT N +TG GN A ++ R D++ EEA L + ++ Sbjct: 42 DKKGPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHAT 101 Query: 510 YRD 518 +RD Sbjct: 102 HRD 104
>FPG_DECAR (Q479M6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 276 Score = 31.2 bits (69), Expect = 2.2 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -2 Query: 499 SKHFSMSLTASSKVMSSRHSPRRIGIAIWFPNPVAM*FSSKCVPIMLT 356 +KH L + +++ PRR G+ +W P P A S++C P++ T Sbjct: 92 AKHDHFELVLAGQILRFA-DPRRFGVVLWQPGPPA---SAECHPLLAT 135
>CWC23_ASHGO (Q752B6) Pre-mRNA-splicing factor CWC23| Length = 273 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = +3 Query: 414 HMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINK-------FQIAKI 554 H+ IP G+WR + + L+E C L LL R S+ N FQ AK+ Sbjct: 137 HLRIPY--GDWRPNTSISRDSTLVETCTLRLLLRQNSTTNSKSSMLQLFQRAKL 188
>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 G +FE +A G G + A+ I +R+D+ ++A+KL L L + + ++A Sbjct: 156 GAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTAEGIEVA 213 Query: 549 KITTE 563 IT + Sbjct: 214 YITMD 218
>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/65 (27%), Positives = 33/65 (50%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 G +FE +A G G + A+ I +R+D+ ++A+KL L L + + ++A Sbjct: 156 GAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTL--EEPTAEGIEVA 213 Query: 549 KITTE 563 IT + Sbjct: 214 YITMD 218
>AEP3_CANGA (Q6FKT1) ATPase expression protein 3| Length = 623 Score = 30.8 bits (68), Expect = 2.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = -1 Query: 521 SVTVQQDKQALLNELNSFFKSHVLTPFTTKDWDCHMVPKSSGNVILLKVC 372 S + +++K LLN+LN+F L FTTK W +GN + K+C Sbjct: 503 SSSCEKNKTELLNKLNNFSWGKQLPLFTTKVW-------KNGNSEVRKIC 545
>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 30.8 bits (68), Expect = 2.9 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 3/191 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 +I ++ D V++A D A+ +++ ++ + L+ GE D + Y+ + Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQK- 62 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKY---LG 353 + + +G L P + RRN D L + DE L Sbjct: 63 NVQLYKMRNGYELSPT------AAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALY 116 Query: 354 MVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 533 ++ + + A G+G + + IL + ++ E AV+L+ KCL L R ++ Sbjct: 117 YMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLP 176 Query: 534 KFQIAKITTEG 566 F + I +G Sbjct: 177 TFSVRVIDKDG 187
>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 30.8 bits (68), Expect = 2.9 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 3/191 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 +I ++ D V++A D A+ +++ ++ + L+ GE D + Y+ + Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQK- 62 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKY---LG 353 + + +G L P + RRN D L + DE L Sbjct: 63 NVQLYKMRNGYELSPT------AAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALY 116 Query: 354 MVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 533 ++ + + A G+G + + IL + ++ E AV+L+ KCL L R ++ Sbjct: 117 YMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLP 176 Query: 534 KFQIAKITTEG 566 F + I +G Sbjct: 177 TFSVRVIDKDG 187
>PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) Length = 250 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +3 Query: 396 ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 554 A G N A +L+ ++++D+T E+AVKL K L + + K ++A++ Sbjct: 163 AIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215
>TPIS_CLOPE (Q8XKU1) Triosephosphate isomerase (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 248 Score = 30.8 bits (68), Expect = 2.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 Query: 417 MAIPILRGEWREDMTFEEAVKLIEK 491 M PI+ G W+ T +EAVKL+E+ Sbjct: 1 MRTPIIAGNWKMHYTIDEAVKLVEE 25
>METX_COREF (Q8FRT0) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 377 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 303 PGSSIEGQTYCACCTLLLSGRHGFPWGPMSSH 208 PG +I+ YC CT +L G +G GP S H Sbjct: 72 PGKAIDTDLYCVICTNVLGGCNG-STGPSSQH 102
>ITAD_HUMAN (Q13349) Integrin alpha-D precursor (Leukointegrin alpha D) (ADB2)| (CD11d antigen) Length = 1162 Score = 26.2 bits (56), Expect(2) = 4.6 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = -3 Query: 423 LPYGSQIQWQCDS 385 LP G ++QWQCD+ Sbjct: 496 LPRGQRVQWQCDA 508 Score = 22.3 bits (46), Expect(2) = 4.6 Identities = 7/14 (50%), Positives = 8/14 (57%) Frame = -3 Query: 264 CTLLLSGRHGFPWG 223 C +L G G PWG Sbjct: 506 CDAVLRGEQGHPWG 519
>PSA4_PETHY (O82530) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) Length = 249 Score = 30.0 bits (66), Expect = 4.9 Identities = 16/53 (30%), Positives = 30/53 (56%) Frame = +3 Query: 396 ATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKI 554 A G N A +L+ ++++D+T EEAV+L K L + + K ++A++ Sbjct: 163 AIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
>C97B2_SOYBN (O48921) Cytochrome P450 97B2 (EC 1.14.-.-)| Length = 576 Score = 29.6 bits (65), Expect = 6.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 369 GTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIA 548 GT FE H +T + + IP+ R F++ +K+I CL L+ + S + + Sbjct: 252 GTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQDDLKVINTCLDGLIRNAKESRQETDVE 311 Query: 549 KI 554 K+ Sbjct: 312 KL 313
>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 29.6 bits (65), Expect = 6.4 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 3/191 (1%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 +I ++ D V++A D A+ +++ ++ + L+ GE D + Y+ + Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQK- 62 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKY---LG 353 + + +G L P + RRN D L + DE L Sbjct: 63 NVQLYKMRNGYELSPT------AAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALY 116 Query: 354 MVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSIN 533 ++ + + A G+G + + IL + ++ E AV+L+ KCL L R ++ Sbjct: 117 YMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLP 176 Query: 534 KFQIAKITTEG 566 F + I G Sbjct: 177 TFSVRIIDKNG 187
>Y164_UREPA (Q9PQY0) Hypothetical protein UU164| Length = 395 Score = 29.3 bits (64), Expect = 8.3 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 5/152 (3%) Frame = +3 Query: 96 IKEVGKHSLIGGSGEFSD--FQEILRYLDELTL---NDHMWDDGNSLGPKEIHAYLTRVM 260 I EVG +IG E+ D Q+ + +D LTL ND+ + S+ K+ A Sbjct: 70 IYEVG---VIGQVEEYRDDFTQKQVPAIDRLTLHLSNDYQKEVSISVFDKKTGAQ----- 121 Query: 261 YNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRG 440 WN + + ++N+ + ++ +ATG N++ IP L Sbjct: 122 ----------WNDFLAKTLANLEVVKQDQINLINIDAIY--QSCLATG--NYIIIPELSP 167 Query: 441 EWREDMTFEEAVKLIEKCLLVLLYRDRSSINK 536 + E +T +E +K++EK +YR + K Sbjct: 168 DRVESLTDDERLKIVEK-----IYRKAKQVTK 194
>PSB2_SCHPO (Q09720) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 194 Score = 29.3 bits (64), Expect = 8.3 Identities = 26/164 (15%), Positives = 67/164 (40%) Frame = +3 Query: 3 VIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFSDFQEILRYLDEL 182 ++A++ +D V+ A + A G T+ ++ + + H+L+ GE D Y+ Sbjct: 4 LLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI-AA 62 Query: 183 TLNDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSXXXXXXXXXXXXDEKYLGMVN 362 ++ + +L P+ ++ + + P + E + ++ Sbjct: 63 NISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELF--WLD 120 Query: 363 MIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKC 494 + T + G+ + + I ++ D+T +EAV++++ C Sbjct: 121 YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLC 164
>UVRC_BACTN (Q8A2N9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 609 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 441 EWREDMTFEEAVKLIEKCLLVLLYRDRSSI 530 E +M FEEA K+ EK LL+ YR +S + Sbjct: 226 ELANEMKFEEAQKIKEKYLLIENYRSKSEV 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,415,813 Number of Sequences: 219361 Number of extensions: 2035456 Number of successful extensions: 5353 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 5168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5331 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
