ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6b14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
2dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
3dbj|AK102240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 5e-69
4ref|NM_112811.2| Arabidopsis thaliana unknown protein AT3G19240 ... 121 3e-24
5dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 121 3e-24
6emb|X69672.1|CCCYPRO4A C.cardunculus cypro4 mRNA 101 2e-18
7emb|Y13632.1|LEY13632 Lycopersicon esculentum mRNA for Dem protein 96 2e-16
8gb|BT016766.1| Zea mays clone Contig599 mRNA sequence 86 1e-13
9gb|AY323822.1| Lycopersicon esculentum DEM2 (Dem2) mRNA, complet... 84 6e-13
10gb|AY323821.1| Lycopersicon esculentum DEM2 (Dem2) gene, complet... 84 6e-13
11ref|XM_468194.1| Oryza sativa (japonica cultivar-group), mRNA 64 5e-07
12ref|XM_507019.1| PREDICTED Oryza sativa (japonica cultivar-group... 64 5e-07
13dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
14dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
15dbj|AK112100.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
16dbj|AK101046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 5e-07
17gb|AY504210.1| Sorghum bicolor clone 1446-SC0706 RFLP probe pSB1446 62 2e-06
18gb|AY504209.1| Sorghum bicolor clone 1446-SC0509 RFLP probe pSB1446 62 2e-06
19gb|AY504208.1| Sorghum bicolor clone 1446-195684 RFLP probe pSB1446 62 2e-06
20gb|AY504207.1| Sorghum bicolor clone 1446-SC0326 RFLP probe pSB1446 62 2e-06
21gb|AY504206.1| Sorghum bicolor clone 1446-SC0155 RFLP probe pSB1446 62 2e-06
22gb|AY504205.1| Sorghum bicolor clone 1446-SC0033 RFLP probe pSB1446 62 2e-06
23gb|AY504204.1| Sorghum bicolor clone 1446-BTx3197 RFLP probe pSB... 62 2e-06
24gb|AY504203.1| Sorghum bicolor clone 1446-56174 RFLP probe pSB1446 62 2e-06
25gb|AY504202.1| Sorghum bicolor clone 1446-56003 RFLP probe pSB1446 62 2e-06
26gb|AY504201.1| Sorghum bicolor clone 1446-51030 RFLP probe pSB1446 62 2e-06
27gb|AY504200.1| Sorghum bicolor clone 1446-50875 RFLP probe pSB1446 62 2e-06
28gb|AY504199.1| Sorghum bicolor clone 1446-257595 RFLP probe pSB1446 62 2e-06
29gb|AY504198.1| Sorghum bicolor clone 1446-246712 RFLP probe pSB1446 62 2e-06
30gb|AY504197.1| Sorghum bicolor clone 1446-22913 RFLP probe pSB1446 62 2e-06
31gb|AY504196.1| Sorghum bicolor clone 1446-152702 RFLP probe pSB1446 62 2e-06
32gb|AY504195.1| Sorghum bicolor clone 1446-RTx430 RFLP probe pSB1446 62 2e-06
33gb|AY504194.1| Sorghum bicolor clone 1446-77034 RFLP probe pSB1446 62 2e-06
34ref|NM_119494.3| Arabidopsis thaliana unknown protein AT4G33400 ... 54 5e-04
35gb|AY504211.1| Sorghum bicolor clone 1446-514605 RFLP probe pSB1446 54 5e-04
36gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete seq... 54 5e-04
37gb|AY096497.1| Arabidopsis thaliana putative Dem protein (At4g33... 54 5e-04
38emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, ... 54 5e-04
39emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BA... 54 5e-04
40emb|BX827029.1|CNS0A2GH Arabidopsis thaliana Full-length cDNA Co... 54 5e-04
41gb|BT004415.1| Arabidopsis thaliana clone U09596 putative Dem pr... 54 5e-04
42gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, com... 42 1.9
43gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, com... 42 1.9
44gb|AC073958.4| Homo sapiens BAC clone RP11-533L22 from 7, comple... 42 1.9
45gb|AC145092.1| Pan troglodytes BAC clone RP43-12J7 from 7, compl... 42 1.9
46gb|AC157479.3| Pan troglodytes BAC clone RP43-129B13 from chromo... 42 1.9
47emb|CR759908.11| Zebrafish DNA sequence from clone DKEYP-38F5 in... 42 1.9
48emb|CR956650.4| Pig DNA sequence from clone CH242-171I16 on chro... 40 7.7
49gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's ... 40 7.7
50ref|XM_786510.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.7
51gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone mth2-4... 40 7.7
52gb|AC111199.4| Homo sapiens BAC clone RP11-722M4 from 2, complet... 40 7.7
53emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 40 7.7
54emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chro... 40 7.7 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  270 bits (136), Expect = 5e-69
 Identities = 460/567 (81%), Gaps = 1/567 (0%)
 Strand = Plus / Minus

                                                                           
Query: 1       aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
               ||||| ||||| ||||| || || ||||| ||||||||||| || ||||| |||||  | 
Sbjct: 4336981 aagcctcatgccaagggtgtccatcagctggacattgagaccggaaaggtcgtctcagaa 4336922

                                                                           
Query: 61      tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaag 120
               ||||| ||||||||||| ||  | || || ||||||||||||||||| || |||  ||||
Sbjct: 4336921 tggaaatttgggaaggacggagcagatattaacatgagggatatcacaaatgattccaag 4336862

                                                                           
Query: 121     ggcgcacagnatggatgcttcggaatccacattcctgggactagatgacaaccgactgtg 180
               || || ||  |||||  | || || || || ||| |||| || ||||||||| |  | ||
Sbjct: 4336861 ggtgcgca-aatggacccatcagagtctaccttcttggggcttgatgacaacaggttatg 4336803

                                                                           
Query: 181     ccggtgggatatgagggatcgacatgggattgtgcagaacttggctagttcgatggagtc 240
               ||| ||||| |||||||| || |  ||||||||||||||| | || ||| | |  |||||
Sbjct: 4336802 ccgttgggacatgagggaccgtcgggggattgtgcagaacatagccagtgctacagagtc 4336743

                                                                           
Query: 241     gccagtgttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgctt 300
               ||| ||  || ||||||| ||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 4336742 gccggtcctgcaatggacacaggggcatcagttctctaggggcaccaacttccagtgttt 4336683

                                                                           
Query: 301     tgcatcaactggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgta 360
                || ||||| || |||||||| || || || || ||  | || |||||| | ||| ||||
Sbjct: 4336682 cgcgtcaacaggagatgggtcaattgttgttggttcacttgatgggaaagtccgtctgta 4336623

                                                                           
Query: 361     ctcaaagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattac 420
               ||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 4336622 ctcgaagagttctatgagaatggcaaagacagccttcccagggctgggttcaccaattac 4336563

                                                                           
Query: 421     tcatgtggacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgat 480
               |||||| ||||| || |||||||| |||||||| || ||||| ||||| || ||| ||||
Sbjct: 4336562 tcatgtcgacgtcacctacgatggaaagtggatcctcggaactactgacacgtacttgat 4336503

                                                                           
Query: 481     actcatttgcaccattttcattgacaaggatgggaaggagaagacagggtttggtggaag 540
                || || |||||||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 4336502 tcttatatgcaccatcttcattgacaaggatgggaaggaaaagacagggtttggagggag 4336443

                                          
Query: 541     aatggggaaccgaattgctgcaccaag 567
                ||||| ||| |||||||||| |||||
Sbjct: 4336442 gatgggcaacagaattgctgccccaag 4336416



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                            
Query: 37       gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
                |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 33566826 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 33566885

                                                                            
Query: 97       agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
                 | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 33566886 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 33566944

                                                           
Query: 157      gggactagatgacaaccgactgtgccggtgggatatgagggat 199
                 ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 33566945 aggattggatgacaaccggctatgccggtgggatatgagggat 33566987



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                            
Query: 260      caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
                ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 33567048 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 33567107

                                                                            
Query: 320      tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
                || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 33567108 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 33567167

                                                                            
Query: 380      atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
                ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 33567168 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 33567227

                                                                            
Query: 440      gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
                |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 33567228 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 33567287

                                             
Query: 500      attgacaaggatgggaaggagaagacagg 528
                |  ||||||||||| || |||||||||||
Sbjct: 33567288 aaggacaaggatggtaaagagaagacagg 33567316
to top
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score =  270 bits (136), Expect = 5e-69
 Identities = 460/567 (81%), Gaps = 1/567 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
             ||||| ||||| ||||| || || ||||| ||||||||||| || ||||| |||||  | 
Sbjct: 20545 aagcctcatgccaagggtgtccatcagctggacattgagaccggaaaggtcgtctcagaa 20486

                                                                         
Query: 61    tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaag 120
             ||||| ||||||||||| ||  | || || ||||||||||||||||| || |||  ||||
Sbjct: 20485 tggaaatttgggaaggacggagcagatattaacatgagggatatcacaaatgattccaag 20426

                                                                         
Query: 121   ggcgcacagnatggatgcttcggaatccacattcctgggactagatgacaaccgactgtg 180
             || || ||  |||||  | || || || || ||| |||| || ||||||||| |  | ||
Sbjct: 20425 ggtgcgca-aatggacccatcagagtctaccttcttggggcttgatgacaacaggttatg 20367

                                                                         
Query: 181   ccggtgggatatgagggatcgacatgggattgtgcagaacttggctagttcgatggagtc 240
             ||| ||||| |||||||| || |  ||||||||||||||| | || ||| | |  |||||
Sbjct: 20366 ccgttgggacatgagggaccgtcgggggattgtgcagaacatagccagtgctacagagtc 20307

                                                                         
Query: 241   gccagtgttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgctt 300
             ||| ||  || ||||||| ||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 20306 gccggtcctgcaatggacacaggggcatcagttctctaggggcaccaacttccagtgttt 20247

                                                                         
Query: 301   tgcatcaactggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgta 360
              || ||||| || |||||||| || || || || ||  | || |||||| | ||| ||||
Sbjct: 20246 cgcgtcaacaggagatgggtcaattgttgttggttcacttgatgggaaagtccgtctgta 20187

                                                                         
Query: 361   ctcaaagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattac 420
             ||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 20186 ctcgaagagttctatgagaatggcaaagacagccttcccagggctgggttcaccaattac 20127

                                                                         
Query: 421   tcatgtggacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgat 480
             |||||| ||||| || |||||||| |||||||| || ||||| ||||| || ||| ||||
Sbjct: 20126 tcatgtcgacgtcacctacgatggaaagtggatcctcggaactactgacacgtacttgat 20067

                                                                         
Query: 481   actcatttgcaccattttcattgacaaggatgggaaggagaagacagggtttggtggaag 540
              || || |||||||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 20066 tcttatatgcaccatcttcattgacaaggatgggaaggaaaagacagggtttggagggag 20007

                                        
Query: 541   aatggggaaccgaattgctgcaccaag 567
              ||||| ||| |||||||||| |||||
Sbjct: 20006 gatgggcaacagaattgctgccccaag 19980
to top
>dbj|AK102240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088C24, full
            insert sequence
          Length = 2332

 Score =  270 bits (136), Expect = 5e-69
 Identities = 460/567 (81%), Gaps = 1/567 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
            ||||| ||||| ||||| || || ||||| ||||||||||| || ||||| |||||  | 
Sbjct: 1120 aagcctcatgccaagggtgtccatcagctggacattgagaccggaaaggtcgtctcagaa 1179

                                                                        
Query: 61   tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaag 120
            ||||| ||||||||||| ||  | || || ||||||||||||||||| || |||  ||||
Sbjct: 1180 tggaaatttgggaaggacggagcagatattaacatgagggatatcacaaatgattccaag 1239

                                                                        
Query: 121  ggcgcacagnatggatgcttcggaatccacattcctgggactagatgacaaccgactgtg 180
            || || ||  |||||  | || || || || ||| |||| || ||||||||| |  | ||
Sbjct: 1240 ggtgcgca-aatggacccatcagagtctaccttcttggggcttgatgacaacaggttatg 1298

                                                                        
Query: 181  ccggtgggatatgagggatcgacatgggattgtgcagaacttggctagttcgatggagtc 240
            ||| ||||| |||||||| || |  ||||||||||||||| | || ||| | |  |||||
Sbjct: 1299 ccgttgggacatgagggaccgtcgggggattgtgcagaacatagccagtgctacagagtc 1358

                                                                        
Query: 241  gccagtgttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgctt 300
            ||| ||  || ||||||| ||||||||||||||||| ||||| || ||||||||||| ||
Sbjct: 1359 gccggtcctgcaatggacacaggggcatcagttctctaggggcaccaacttccagtgttt 1418

                                                                        
Query: 301  tgcatcaactggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgta 360
             || ||||| || |||||||| || || || || ||  | || |||||| | ||| ||||
Sbjct: 1419 cgcgtcaacaggagatgggtcaattgttgttggttcacttgatgggaaagtccgtctgta 1478

                                                                        
Query: 361  ctcaaagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattac 420
            ||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||
Sbjct: 1479 ctcgaagagttctatgagaatggcaaagacagccttcccagggctgggttcaccaattac 1538

                                                                        
Query: 421  tcatgtggacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgat 480
            |||||| ||||| || |||||||| |||||||| || ||||| ||||| || ||| ||||
Sbjct: 1539 tcatgtcgacgtcacctacgatggaaagtggatcctcggaactactgacacgtacttgat 1598

                                                                        
Query: 481  actcatttgcaccattttcattgacaaggatgggaaggagaagacagggtttggtggaag 540
             || || |||||||| ||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 1599 tcttatatgcaccatcttcattgacaaggatgggaaggaaaagacagggtttggagggag 1658

                                       
Query: 541  aatggggaaccgaattgctgcaccaag 567
             ||||| ||| |||||||||| |||||
Sbjct: 1659 gatgggcaacagaattgctgccccaag 1685
to top
>ref|NM_112811.2| Arabidopsis thaliana unknown protein AT3G19240 mRNA, complete cds
          Length = 2215

 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                        
Query: 248  ttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgctttgcatca 307
            ||||||||||| || || ||||||||||| || |||||||| ||||||||||||||| | 
Sbjct: 1394 ttggaatggactcaaggccatcagttctctagaggaacaaatttccagtgctttgcaact 1453

                                                                        
Query: 308  actggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaag 367
            ||||| |||||||| ||||| || || ||  | ||||| || ||  |  | |||||||||
Sbjct: 1454 actggagatgggtcaatcgttgtgggatcacttgacggaaagataagactttactcaaag 1513

                                                                        
Query: 368  agctctatgaggatggcgaagacggccttcccagggctgggttcgccgattactcatgtg 427
            | ||| ||||| ||||| || ||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 1514 acctcaatgagaatggcaaaaacggcttttccagggctcggttcaccaattacacatgtg 1573

                                                                        
Query: 428  gacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgatactcatt 487
            |||||  | || |||||||| |||||||| || ||||| ||||| ||| || | || |||
Sbjct: 1574 gacgtttcttatgatgggaaatggatactgggcaccacagatacgtacttggttcttatt 1633

                         
Query: 488  tgcaccattttca 500
            |||||| ||||||
Sbjct: 1634 tgcacccttttca 1646
to top
>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11
          Length = 81875

 Score =  121 bits (61), Expect = 3e-24
 Identities = 205/253 (81%)
 Strand = Plus / Plus

                                                                         
Query: 248   ttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgctttgcatca 307
             ||||||||||| || || ||||||||||| || |||||||| ||||||||||||||| | 
Sbjct: 60744 ttggaatggactcaaggccatcagttctctagaggaacaaatttccagtgctttgcaact 60803

                                                                         
Query: 308   actggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaag 367
             ||||| |||||||| ||||| || || ||  | ||||| || ||  |  | |||||||||
Sbjct: 60804 actggagatgggtcaatcgttgtgggatcacttgacggaaagataagactttactcaaag 60863

                                                                         
Query: 368   agctctatgaggatggcgaagacggccttcccagggctgggttcgccgattactcatgtg 427
             | ||| ||||| ||||| || ||||| || |||||||| ||||| || ||||| ||||||
Sbjct: 60864 acctcaatgagaatggcaaaaacggcttttccagggctcggttcaccaattacacatgtg 60923

                                                                         
Query: 428   gacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgatactcatt 487
             |||||  | || |||||||| |||||||| || ||||| ||||| ||| || | || |||
Sbjct: 60924 gacgtttcttatgatgggaaatggatactgggcaccacagatacgtacttggttcttatt 60983

                          
Query: 488   tgcaccattttca 500
             |||||| ||||||
Sbjct: 60984 tgcacccttttca 60996
to top
>emb|X69672.1|CCCYPRO4A C.cardunculus cypro4 mRNA
          Length = 1815

 Score =  101 bits (51), Expect = 2e-18
 Identities = 183/227 (80%)
 Strand = Plus / Plus

                                                                        
Query: 254  tggacccaggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggt 313
            |||||||| |||||||||||||| ||||| ||||| |||||  |||||||  | ||||||
Sbjct: 843  tggacccaagggcatcagttctctaggggtacaaatttccaaagctttgctactactggt 902

                                                                        
Query: 314  gatgggtccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctct 373
            ||||| || || || || |||||  | || |||||||| || |||||||| |  |  || 
Sbjct: 903  gatggttcaattgttgttggctccctagatgggaaaatccggttgtactcgaccacttcc 962

                                                                        
Query: 374  atgaggatggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtg 433
            ||||||||||| ||||| || ||||| ||||| |||||||| || ||||||||||| || 
Sbjct: 963  atgaggatggctaagactgctttccctgggcttggttcgccaatcactcatgtggatgtc 1022

                                                           
Query: 434  acgtacgatgggaagtggatactaggaaccactgatacctacctgat 480
            || || ||||| || |||||| | || |||||||| ||||| |||||
Sbjct: 1023 acctatgatggtaaatggatattgggcaccactgacacctatctgat 1069
to top
>emb|Y13632.1|LEY13632 Lycopersicon esculentum mRNA for Dem protein
          Length = 2105

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 163/200 (81%), Gaps = 1/200 (0%)
 Strand = Plus / Plus

                                                                        
Query: 20   tacaccagcttgacattgagactgggaaggttgtctcccagtggaagtttgggaaggatg 79
            |||| ||| |||| || |||||||||||||||||   | |||||||||||| ||| ||||
Sbjct: 1067 tacatcagtttgatatcgagactgggaaggttgttagcgagtggaagtttgagaaagatg 1126

                                                                        
Query: 80   gtactgacatcaacatgagggatatcactaacgatagcaagggcgcacagnatggatgct 139
            | ||||| ||||  ||||||||||||||||| |||||||| || || ||| |||||| ||
Sbjct: 1127 gaactgatatcacgatgagggatatcactaatgatagcaaaggagctcag-atggatcct 1185

                                                                        
Query: 140  tcggaatccacattcctgggactagatgacaaccgactgtgccggtgggatatgagggat 199
            ||||  || || ||| | || |||||||| ||| || ||||  ||||||||||| | |||
Sbjct: 1186 tcggggtctactttcttagggctagatgataacagattgtgtaggtgggatatgcgtgat 1245

                                
Query: 200  cgacatgggattgtgcagaa 219
            || |||||||| || |||||
Sbjct: 1246 cggcatgggatggtccagaa 1265



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                        
Query: 398  ccagggctgggttcgccgattactcatgtggacgtgacgtacgatgggaagtggatacta 457
            ||||| || ||||| || || ||||||||||| || || || ||||||||||||||| | 
Sbjct: 1441 ccaggccttggttctcctatcactcatgtggatgttacctatgatgggaagtggatattg 1500

                                    
Query: 458  ggaaccactgatacctacctgata 481
            || || |||||||| ||| |||||
Sbjct: 1501 gggacaactgatacttacttgata 1524



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 278  aggggaacaaacttccagtgctttgcatcaactggtgatgg 318
            |||||||| ||||| |||||||||||  | |||||||||||
Sbjct: 1321 aggggaactaactttcagtgctttgctactactggtgatgg 1361
to top
>gb|BT016766.1| Zea mays clone Contig599 mRNA sequence
          Length = 1427

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 163/203 (80%)
 Strand = Plus / Plus

                                                                       
Query: 365 aagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattactcat 424
           |||||||| ||| | ||||||||||| || |||||||| || || || |||||||| |||
Sbjct: 577 aagagctcgatgcgtatggcgaagacagcattcccaggccttgggtccccgattacacat 636

                                                                       
Query: 425 gtggacgtgacgtacgatgggaagtggatactaggaaccactgatacctacctgatactc 484
           || || || || || |||||||| ||||| || ||||| ||||| || ||| ||||  | 
Sbjct: 637 gtagatgttacttatgatgggaaatggattctgggaacaactgacacatacttgatcttg 696

                                                                       
Query: 485 atttgcaccattttcattgacaaggatgggaaggagaagacagggtttggtggaagaatg 544
           || ||||| || ||||  ||||| |||||||| || ||||| |||||| ||||  |||||
Sbjct: 697 atatgcactatcttcaaggacaaagatgggaaagaaaagactgggtttagtggccgaatg 756

                                  
Query: 545 gggaaccgaattgctgcaccaag 567
           |||||  | ||||||||||||||
Sbjct: 757 gggaataggattgctgcaccaag 779



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 29  ttgacattgagactgggaaggttgtc 54
           ||||| ||||||||||||||||||||
Sbjct: 242 ttgacgttgagactgggaaggttgtc 267
to top
>gb|AY323822.1| Lycopersicon esculentum DEM2 (Dem2) mRNA, complete cds
          Length = 1999

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 183/230 (79%)
 Strand = Plus / Plus

                                                                        
Query: 242  ccagtgttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgcttt 301
            ||||||||| | ||||| |||||||||||||| || || ||||| || || |||||||||
Sbjct: 1234 ccagtgttgaattggactcaggggcatcagttttcaagaggaacgaattttcagtgcttt 1293

                                                                        
Query: 302  gcatcaactggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgtac 361
            ||  | ||||||||||| ||||| || || || ||  | || ||||| ||||| ||||||
Sbjct: 1294 gccacgactggtgatggctccattgtagttggatcacttgatgggaagattcgcttgtac 1353

                                                                        
Query: 362  tcaaagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattact 421
            || |||| ||||||||||   || ||||| || ||||| || || || || || ||||| 
Sbjct: 1354 tcgaagacctctatgaggcaagcaaagactgcattccctggccttggctctccaattaca 1413

                                                              
Query: 422  catgtggacgtgacgtacgatgggaagtggatactaggaaccactgatac 471
            ||||| || || || |||||||| || |||||||| || || ||||||||
Sbjct: 1414 catgttgatgttacttacgatggcaaatggatactgggcacgactgatac 1463
to top
>gb|AY323821.1| Lycopersicon esculentum DEM2 (Dem2) gene, complete cds
          Length = 5675

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 183/230 (79%)
 Strand = Plus / Plus

                                                                        
Query: 242  ccagtgttggaatggacccaggggcatcagttctccaggggaacaaacttccagtgcttt 301
            ||||||||| | ||||| |||||||||||||| || || ||||| || || |||||||||
Sbjct: 2619 ccagtgttgaattggactcaggggcatcagttttcaagaggaacgaattttcagtgcttt 2678

                                                                        
Query: 302  gcatcaactggtgatgggtccatcgtggtaggctctttggacgggaaaattcgtttgtac 361
            ||  | ||||||||||| ||||| || || || ||  | || ||||| ||||| ||||||
Sbjct: 2679 gccacgactggtgatggctccattgtagttggatcacttgatgggaagattcgcttgtac 2738

                                                                        
Query: 362  tcaaagagctctatgaggatggcgaagacggccttcccagggctgggttcgccgattact 421
            || |||| ||||||||||   || ||||| || ||||| || || || || || ||||| 
Sbjct: 2739 tcgaagacctctatgaggcaagcaaagactgcattccctggccttggctctccaattaca 2798

                                                              
Query: 422  catgtggacgtgacgtacgatgggaagtggatactaggaaccactgatac 471
            ||||| || || || |||||||| || |||||||| || || ||||||||
Sbjct: 2799 catgttgatgttacttacgatggcaaatggatactgggcacgactgatac 2848
to top
>ref|XM_468194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2103

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 37   gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
            |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 1038 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 1097

                                                                        
Query: 97   agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
             | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 1098 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 1156

                                                       
Query: 157  gggactagatgacaaccgactgtgccggtgggatatgagggat 199
             ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 1157 aggattggatgacaaccggctatgccggtgggatatgagggat 1199



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                        
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
            ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 1260 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 1319

                                                                        
Query: 320  tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
            || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 1320 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 1379

                                                                        
Query: 380  atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
            ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 1380 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 1439

                                                                        
Query: 440  gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
            |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 1440 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 1499

                                         
Query: 500  attgacaaggatgggaaggagaagacagg 528
            |  ||||||||||| || |||||||||||
Sbjct: 1500 aaggacaaggatggtaaagagaagacagg 1528
to top
>ref|XM_507019.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.36
            mRNA
          Length = 2225

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 37   gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
            |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 1041 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 1100

                                                                        
Query: 97   agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
             | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 1101 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 1159

                                                       
Query: 157  gggactagatgacaaccgactgtgccggtgggatatgagggat 199
             ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 1160 aggattggatgacaaccggctatgccggtgggatatgagggat 1202



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                        
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
            ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 1263 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 1322

                                                                        
Query: 320  tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
            || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 1323 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 1382

                                                                        
Query: 380  atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
            ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 1383 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 1442

                                                                        
Query: 440  gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
            |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 1443 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 1502

                                         
Query: 500  attgacaaggatgggaaggagaagacagg 528
            |  ||||||||||| || |||||||||||
Sbjct: 1503 aaggacaaggatggtaaagagaagacagg 1531
to top
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0054K20
          Length = 153584

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                          
Query: 37     gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
              |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 141701 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 141760

                                                                          
Query: 97     agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
               | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 141761 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 141819

                                                         
Query: 157    gggactagatgacaaccgactgtgccggtgggatatgagggat 199
               ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 141820 aggattggatgacaaccggctatgccggtgggatatgagggat 141862



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                          
Query: 260    caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
              ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 141923 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 141982

                                                                          
Query: 320    tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
              || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 141983 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 142042

                                                                          
Query: 380    atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
              ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 142043 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 142102

                                                                          
Query: 440    gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
              |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 142103 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 142162

                                           
Query: 500    attgacaaggatgggaaggagaagacagg 528
              |  ||||||||||| || |||||||||||
Sbjct: 142163 aaggacaaggatggtaaagagaagacagg 142191
to top
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1046_F07
          Length = 114184

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                         
Query: 37    gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
             |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 37497 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 37556

                                                                         
Query: 97    agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
              | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 37557 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 37615

                                                        
Query: 157   gggactagatgacaaccgactgtgccggtgggatatgagggat 199
              ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 37616 aggattggatgacaaccggctatgccggtgggatatgagggat 37658



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                         
Query: 260   caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
             ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 37719 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 37778

                                                                         
Query: 320   tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
             || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 37779 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 37838

                                                                         
Query: 380   atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
             ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 37839 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 37898

                                                                         
Query: 440   gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
             |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 37899 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 37958

                                          
Query: 500   attgacaaggatgggaaggagaagacagg 528
             |  ||||||||||| || |||||||||||
Sbjct: 37959 aaggacaaggatggtaaagagaagacagg 37987
to top
>dbj|AK112100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F01, full
            insert sequence
          Length = 2225

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 37   gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
            |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 1041 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 1100

                                                                        
Query: 97   agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
             | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 1101 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 1159

                                                       
Query: 157  gggactagatgacaaccgactgtgccggtgggatatgagggat 199
             ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 1160 aggattggatgacaaccggctatgccggtgggatatgagggat 1202



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 152/194 (78%)
 Strand = Plus / Plus

                                                                        
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
            ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 1263 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 1322

                                                                        
Query: 320  tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
            || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 1323 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 1382

                                                                        
Query: 380  atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
            ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 1383 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 1442

                          
Query: 440  gatgggaagtggat 453
            ||||||||||||||
Sbjct: 1443 gatgggaagtggat 1456
to top
>dbj|AK101046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005J09, full
            insert sequence
          Length = 2103

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 131/163 (80%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 37   gagactgggaaggttgtctcccagtggaagtttgggaaggatggtactgacatcaacatg 96
            |||||||| ||||||||  | ||||||| ||||| ||||||||| ||||||||||  |||
Sbjct: 1038 gagactggcaaggttgtggctcagtggaggtttgagaaggatggaactgacatcacaatg 1097

                                                                        
Query: 97   agggatatcactaacgatagcaagggcgcacagnatggatgcttcggaatccacattcct 156
             | || ||| | ||||| || |||||||| |||  ||||  | || | ||| || ||| |
Sbjct: 1098 cgagacatcgccaacgacagtaagggcgcgcagc-tggaaccctctggatcaaccttctt 1156

                                                       
Query: 157  gggactagatgacaaccgactgtgccggtgggatatgagggat 199
             ||| | ||||||||||| || |||||||||||||||||||||
Sbjct: 1157 aggattggatgacaaccggctatgccggtgggatatgagggat 1199



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 209/269 (77%)
 Strand = Plus / Plus

                                                                        
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatggg 319
            ||||| ||||||||||| ||||| || || ||||| |||||||||   || || ||||| 
Sbjct: 1260 cagggccatcagttctcaaggggcaccaatttccaatgctttgcaagtacaggggatggt 1319

                                                                        
Query: 320  tccatcgtggtaggctctttggacgggaaaattcgtttgtactcaaagagctctatgagg 379
            || || ||||| || ||| |||| || || ||| |  | || || ||||| || ||| ||
Sbjct: 1320 tcgattgtggttggttctgtggatggcaagattaggctctattccaagagttcgatgcgg 1379

                                                                        
Query: 380  atggcgaagacggccttcccagggctgggttcgccgattactcatgtggacgtgacgtac 439
            ||||||||||| || ||||||||||| || || || || || ||||| || || || || 
Sbjct: 1380 atggcgaagacagcattcccagggcttggatcaccaatcacacatgttgatgttacttat 1439

                                                                        
Query: 440  gatgggaagtggatactaggaaccactgatacctacctgatactcatttgcaccattttc 499
            |||||||||||||| || || || |||||||| ||  ||||  | || || ||||| || 
Sbjct: 1440 gatgggaagtggattctgggcactactgatacatatttgatcttgatctgtaccatcttt 1499

                                         
Query: 500  attgacaaggatgggaaggagaagacagg 528
            |  ||||||||||| || |||||||||||
Sbjct: 1500 aaggacaaggatggtaaagagaagacagg 1528
to top
>gb|AY504210.1| Sorghum bicolor clone 1446-SC0706 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504209.1| Sorghum bicolor clone 1446-SC0509 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504208.1| Sorghum bicolor clone 1446-195684 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504207.1| Sorghum bicolor clone 1446-SC0326 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504206.1| Sorghum bicolor clone 1446-SC0155 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504205.1| Sorghum bicolor clone 1446-SC0033 RFLP probe pSB1446
          Length = 320

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504204.1| Sorghum bicolor clone 1446-BTx3197 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504203.1| Sorghum bicolor clone 1446-56174 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504202.1| Sorghum bicolor clone 1446-56003 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504201.1| Sorghum bicolor clone 1446-51030 RFLP probe pSB1446
          Length = 320

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504200.1| Sorghum bicolor clone 1446-50875 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504199.1| Sorghum bicolor clone 1446-257595 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504198.1| Sorghum bicolor clone 1446-246712 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504197.1| Sorghum bicolor clone 1446-22913 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504196.1| Sorghum bicolor clone 1446-152702 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504195.1| Sorghum bicolor clone 1446-RTx430 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AY504194.1| Sorghum bicolor clone 1446-77034 RFLP probe pSB1446
          Length = 333

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| || | |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcgagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>ref|NM_119494.3| Arabidopsis thaliana unknown protein AT4G33400 mRNA, complete cds
          Length = 2321

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
            |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 1384 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 1442
to top
>gb|AY504211.1| Sorghum bicolor clone 1446-514605 RFLP probe pSB1446
          Length = 333

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagccacatgcgaagggggtacaccagcttgacattgagactgggaaggttgtctcccag 60
           ||||||||||| |||||||| || ||  |||| |||||||| ||||| || || ||  | 
Sbjct: 182 aagccacatgccaagggggtgcatcaatttgatattgagacagggaaagtggtttcagaa 241

                                                                      
Query: 61  tggaagtttgggaaggatggtactgacatcaacatgagggatatcactaacgatagcaa 119
           ||||| ||   |||||||||  | ||||| ||||||||||||||||| || ||||||||
Sbjct: 242 tggaaattcaagaaggatggagcggacattaacatgagggatatcacgaatgatagcaa 300
to top
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence
          Length = 118633

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 374   atgaggatggcgaagacggccttcccagggctgggttcgccgattac 420
             |||||||||||||||||||| || |||||||| ||||| || |||||
Sbjct: 72621 atgaggatggcgaagacggcttttccagggcttggttcacctattac 72667
to top
>gb|AY096497.1| Arabidopsis thaliana putative Dem protein (At4g33400) mRNA, complete
            cds
          Length = 2243

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
            |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 1384 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 1442
to top
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79
          Length = 199536

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                         
Query: 260    caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
              |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 107227 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 107169
to top
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project)
          Length = 96475

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 260   caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
             |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 42448 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 42390
to top
>emb|BX827029.1|CNS0A2GH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB89ZB08 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2159

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
            |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 1380 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 1438
to top
>gb|BT004415.1| Arabidopsis thaliana clone U09596 putative Dem protein (At4g33400)
            mRNA, complete cds
          Length = 1969

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 260  caggggcatcagttctccaggggaacaaacttccagtgctttgcatcaactggtgatgg 318
            |||||||||||||| || || || || ||||| |||||||||||| | |||||||||||
Sbjct: 1273 caggggcatcagttttctagagggactaactttcagtgctttgcaactactggtgatgg 1331
to top
>gb|AC120364.7| Mus musculus chromosome 8, clone RP24-291F20, complete sequence
          Length = 193257

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 497    ttcattgacaaggatgggaag 517
              |||||||||||||||||||||
Sbjct: 140650 ttcattgacaaggatgggaag 140670
to top
>gb|AC158385.4| Mus musculus chromosome 8, clone RP24-247P24, complete sequence
          Length = 148656

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 497    ttcattgacaaggatgggaag 517
              |||||||||||||||||||||
Sbjct: 131204 ttcattgacaaggatgggaag 131184
to top
>gb|AC073958.4| Homo sapiens BAC clone RP11-533L22 from 7, complete sequence
          Length = 168991

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 361    ctcaaagagctctatgaggat 381
              |||||||||||||||||||||
Sbjct: 127771 ctcaaagagctctatgaggat 127751
to top
>gb|AC145092.1| Pan troglodytes BAC clone RP43-12J7 from 7, complete sequence
          Length = 78607

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 361  ctcaaagagctctatgaggat 381
            |||||||||||||||||||||
Sbjct: 9382 ctcaaagagctctatgaggat 9402
to top
>gb|AC157479.3| Pan troglodytes BAC clone RP43-129B13 from chromosome 7, complete
              sequence
          Length = 172765

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 361    ctcaaagagctctatgaggat 381
              |||||||||||||||||||||
Sbjct: 130342 ctcaaagagctctatgaggat 130362
to top
>emb|CR759908.11| Zebrafish DNA sequence from clone DKEYP-38F5 in linkage group 20,
              complete sequence
          Length = 164351

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 486    tttgcaccattttcattgaca 506
              |||||||||||||||||||||
Sbjct: 100068 tttgcaccattttcattgaca 100088
to top
>emb|CR956650.4| Pig DNA sequence from clone CH242-171I16 on chromosome 6, complete
             sequence
          Length = 165704

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    tcccagtggaagtttgggaa 74
             ||||||||||||||||||||
Sbjct: 38582 tcccagtggaagtttgggaa 38563
to top
>gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 209981

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 509    gatgggaaggagaagacagggttt 532
              |||||||||||||| |||||||||
Sbjct: 199125 gatgggaaggagaacacagggttt 199102
to top
>ref|XM_786510.1| PREDICTED: Strongylocentrotus purpuratus similar to lysyl
           oxidase-like 2 (LOC586740), partial mRNA
          Length = 1117

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 390 cggccttcccagggctgggt 409
           ||||||||||||||||||||
Sbjct: 86  cggccttcccagggctgggt 67
to top
>gb|AC149491.2| Medicago truncatula chromosome 2 BAC clone mth2-46o19, complete
             sequence
          Length = 106587

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 525   cagggtttggtggaagaatg 544
             ||||||||||||||||||||
Sbjct: 51622 cagggtttggtggaagaatg 51603
to top
>gb|AC111199.4| Homo sapiens BAC clone RP11-722M4 from 2, complete sequence
          Length = 66095

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    ccagcttgacattgagactgggaa 47
             |||||||||||||| |||||||||
Sbjct: 30260 ccagcttgacattgtgactgggaa 30237
to top
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    atggcgaagacggccttccc 399
              ||||||||||||||||||||
Sbjct: 661733 atggcgaagacggccttccc 661714
to top
>emb|AL772397.3| Mouse DNA sequence from clone RP23-95M14 on chromosome 4, complete
             sequence
          Length = 230672

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   ttgcaccattttcattgaca 506
             ||||||||||||||||||||
Sbjct: 30527 ttgcaccattttcattgaca 30546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,353,203
Number of Sequences: 3902068
Number of extensions: 4353203
Number of successful extensions: 71026
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70842
Number of HSP's gapped (non-prelim): 153
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top