| Clone Name | bags5m14 |
|---|---|
| Clone Library Name | barley_pub |
>SPS1_CRAPL (O04932) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1054 Score = 188 bits (477), Expect = 7e-48 Identities = 85/155 (54%), Positives = 116/155 (74%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGLRK LV+WA S+ ++KG E +I ED E S+ YC +FKV PN +PP+KE RK+MR Sbjct: 871 GEGLRKTLVRWAASITDKKGEKEEHVIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMR 930 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+ +Y + +++V P+ ASR+QA+RYL++RWG+EL VV+VGESGD+DYEE+L Sbjct: 931 IQALRCHVVYCQNGNKINVIPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEML 990 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GG+H+T++L G A N +H R YPL DVV D Sbjct: 991 GGVHKTVVLSGVCTTATNLLHANRSYPLADVVCFD 1025
>SPS_BETVU (P49031) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1045 Score = 188 bits (477), Expect = 7e-48 Identities = 88/155 (56%), Positives = 116/155 (74%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGLR+ L++WA S+ E+ G E Q+I ED E S+ YC AFK+ N N +PP KELRK MR Sbjct: 865 GEGLRRTLLRWAASITEKNGENEEQVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMR 924 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+ +Y + ++++V P+ ASRSQA+RYL+VRWG+EL +VV VGE GD+DYE LL Sbjct: 925 IQALRCHVIYCQNGSKMNVIPVLASRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLL 984 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GG+H+T+ILKG N A +H R YPL VV+LD Sbjct: 985 GGVHKTVILKGVSNTALRSLHANRSYPLSHVVSLD 1019
>SPS_SOLTU (Q43845) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1053 Score = 176 bits (447), Expect = 2e-44 Identities = 81/155 (52%), Positives = 115/155 (74%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGLRK LV+WA S++++ G ++ ED ++S+ YC FKV P +PP KELRK+MR Sbjct: 871 GEGLRKTLVRWAASIIDKNGENGDHIVVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMR 930 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+A+Y + +R++V P+ ASRSQA+RYL++RWG++L +VV VGESGD+DYE L+ Sbjct: 931 IQALRCHAVYCQNGSRINVIPVLASRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLI 990 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GGL + +I+KG A++ IH R YPL DV+ D Sbjct: 991 GGLRKAVIMKGLCTNASSLIHGNRNYPLSDVLPFD 1025
>SPS1_CITUN (O22060) Sucrose-phosphate synthase 1 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 1) Length = 1057 Score = 176 bits (447), Expect = 2e-44 Identities = 81/155 (52%), Positives = 116/155 (74%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGLRK LV+WA+ V ++K +++ + S+ YC AF V P PP+KELRK++R Sbjct: 875 GEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLR 934 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+ +Y + +R++V P+ ASRSQA+RYL++RWG+EL +VV VGESGD+DYE LL Sbjct: 935 IQALRCHVIYCQNGSRVNVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 994 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GG+H+T+ILKG + ++N+IH R YPL DV+ +D Sbjct: 995 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPID 1029
>SPS_SPIOL (P31928) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1056 Score = 176 bits (447), Expect = 2e-44 Identities = 88/155 (56%), Positives = 114/155 (73%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGL K LVKWA SV E+KG ++ D S+T+C AFKV + PP KELRK+MR Sbjct: 872 GEGLWKTLVKWAASVNEKKGENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMR 931 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+A+Y + TRL+V P+ ASRSQA+RYLF+RWG+EL N VV VGESGD+DYE LL Sbjct: 932 IQALRCHAIYCQNGTRLNVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLL 991 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GG+H+T+ILKG + +N H R YP++ V+ +D Sbjct: 992 GGVHKTVILKGIGSNTSN-FHATRAYPMEHVMPVD 1025
>SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1059 Score = 176 bits (446), Expect = 3e-44 Identities = 84/155 (54%), Positives = 113/155 (72%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 GEGLRK L++WA+S+ ++K Q++ + S+ YC AF V PPLKELRKLMR Sbjct: 877 GEGLRKTLIRWASSITDKKSENNEQIVSPAEQLSTDYCYAFNVRKAGMAPPLKELRKLMR 936 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 IQ+LRC+ +Y + TRL+V P+ ASRSQA+RYL+VRWG EL +VV VGE GD+DYE L+ Sbjct: 937 IQALRCHPIYCQNGTRLNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLV 996 Query: 370 GGLHRTIILKGDFNIAANRIHTVRRYPLQDVVALD 474 GGLH+++ILKG + A +++H R YPL DV+ LD Sbjct: 997 GGLHKSVILKGVGSRAISQLHNNRNYPLSDVMPLD 1031
>SPS2_CRAPL (O04933) Sucrose-phosphate synthase 2 (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase 2) Length = 1081 Score = 116 bits (291), Expect = 3e-26 Identities = 55/156 (35%), Positives = 99/156 (63%), Gaps = 1/156 (0%) Frame = +1 Query: 10 GEGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMR 189 G+GL+K + K + + K + I ++ S+++CL++ + +P+ + ++R+ +R Sbjct: 898 GDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKKVDDMRQKLR 957 Query: 190 IQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELL 369 ++ LRC+ +Y ++T + V P+ ASRSQA+RYLFVRW + + N+ VI+GE+GD+DYEEL+ Sbjct: 958 MRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETGDTDYEELI 1017 Query: 370 GGLHRTIILKGDFNIAANR-IHTVRRYPLQDVVALD 474 G H+T+I++G + + T Y DV+ D Sbjct: 1018 SGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQD 1053
>SPS_ORYSA (Q43802) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1049 Score = 116 bits (290), Expect = 3e-26 Identities = 51/102 (50%), Positives = 78/102 (76%) Frame = +1 Query: 97 DSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQA 276 D E + +C++F + +PN + E+R+ MR++ LRC+ +Y +ATRL V P+ ASRSQA Sbjct: 909 DVESCNPHCVSFFIKDPNKVRTADEMRERMRMRGLRCHLMYCRNATRLQVVPLLASRSQA 968 Query: 277 IRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 402 +RYLFVRWG+ + N+ +IVGE GD+D+EE+L GLH+T+I++G Sbjct: 969 LRYLFVRWGLSVGNMYLIVGEHGDTDHEEMLSGLHKTVIIRG 1010
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 109 bits (272), Expect = 4e-24 Identities = 47/103 (45%), Positives = 76/103 (73%) Frame = +1 Query: 94 EDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQ 273 +D S+ +C+AF + +P + + E+R+ +R++ LRC+ +Y ++TRL V P+ ASRSQ Sbjct: 911 QDVASSNAHCVAFLIKDPQKVKTVDEMRERLRMRGLRCHIMYCRNSTRLQVVPLLASRSQ 970 Query: 274 AIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 402 A+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G Sbjct: 971 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 1013
>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 730 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/79 (25%), Positives = 38/79 (48%) Frame = +1 Query: 13 EGLRKYLVKWATSVVERKGRIERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRI 192 + R YL KWA SV E R + +++F+D F++++ + P ++ + Sbjct: 304 DSARIYLAKWALSVAEESQRAKLKVLFDDELRELVSDEGFELIDAENNP-----QRRNEV 358 Query: 193 QSLRCNALYNHSATRLSVT 249 NA ++++ RL VT Sbjct: 359 SLAEWNAFFDYNG-RLIVT 376
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 30.0 bits (66), Expect = 3.2 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +1 Query: 205 CNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHR 384 CN+ S++ S TP R++ + + P I E G+ YEE + L + Sbjct: 38 CNS---SSSSSSSATPPSLIRNEPV------FAAPAPIITPNWTEDGNESYEEAIDALKK 88 Query: 385 TIILKGDFN-IAANRIHTV 438 T+I KG+ +AA RI + Sbjct: 89 TLIEKGELEPVAATRIDQI 107
>OXAA_PSEAE (Q9HT06) Inner membrane protein oxaA| Length = 578 Score = 30.0 bits (66), Expect = 3.2 Identities = 10/28 (35%), Positives = 19/28 (67%) Frame = -2 Query: 216 QRITTKRLDSHQFPQLLQGRQMIWIDHF 133 ++I+TK +D QF + +QG + W+ H+ Sbjct: 269 KKISTKDMDKEQFKESVQGGWVAWLQHY 296
>HIRA_FUGRU (O42611) HIRA protein (TUP1-like enhancer of split protein 1)| Length = 1025 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = +1 Query: 73 IERQMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTP 252 +E + D+ S C F+ PN P+ L +Q NA A+RLS TP Sbjct: 859 LETWTLIADTADSLVQCADFRNCLPNQDAPMSS-GPLAAMQGRNFNA--GRLASRLSSTP 915 Query: 253 IHASRSQAIRYL 288 H +S + +L Sbjct: 916 HHLQQSMTLAFL 927
>TSP2_HUMAN (P35442) Thrombospondin-2 precursor| Length = 1172 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%) Frame = -1 Query: 475 CPVQRHPARGISSLCGFCLRQC*SHPSGLWSCG-DPLAVLHNRNH 344 C + P G S F QC S P G WSCG P+ L N H Sbjct: 543 CNKRSCPVDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTH 587
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 28.9 bits (63), Expect = 7.1 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = +1 Query: 163 LKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGES 342 LK+ R L N S++ S TP R++ + + P I E Sbjct: 20 LKKSSSSARSGVLSARFTCNSSSSSSSATPPSLIRNEPV------FAAPAPIITPNWTED 73 Query: 343 GDSDYEELLGGLHRTIILKGDFN-IAANRIHTV 438 G+ YEE + L + +I KG+ +AA RI + Sbjct: 74 GNESYEEAIDALKKMLIEKGELEPVAAARIDQI 106
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +1 Query: 220 NHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILK 399 N S++ S TP R++ + + P I E G+ YEE + L + +I K Sbjct: 40 NSSSSSSSATPPSLIRNEPV------FAAPAPIITPNWTEDGNESYEEAIDALKKMLIEK 93 Query: 400 GDFN-IAANRIHTV 438 G+ +AA RI + Sbjct: 94 GELEPVAAARIDQI 107
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%) Frame = +1 Query: 220 NHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILK 399 N S++ S TP R++ + + P I E G+ YEE + L + +I K Sbjct: 40 NSSSSSSSATPPSLIRNEPV------FAAPAPIITPNWTEDGNESYEEAIDALKKMLIEK 93 Query: 400 GDFN-IAANRIHTV 438 G+ +AA RI + Sbjct: 94 GELEPVAAARIDQI 107
>VANTG_ENTFA (Q9KHL7) Amino acid racemase (EC 5.1.1.-) (Vancomycin G-type| resistance protein vanT) Length = 711 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Frame = -3 Query: 221 LYSALQRSDWILINFLNSFRGGR*FGLTTLNARQ----*VEECSESSKIICLSIL 69 +Y L S W L N L FRG R GL T++ Q V +C + I+C +L Sbjct: 244 MYVLLLPSVWCLFNLLLHFRGKRRTGLRTISLDQLYHSSVYDCCNT--IVCAELL 296
>PMPI_CHLMU (Q9PL41) Probable outer membrane protein pmpI precursor| (Polymorphic membrane protein I) Length = 867 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +1 Query: 187 RIQSLRCNALYNHSATRLSVTPIHASRSQAIRYLFVRWGIELPNIVVIVGESGDS 351 R +L N L+N + +V + + +Q YLF WG + N+ G SG S Sbjct: 562 RQSALVANTLWNTYSDMQAVQSMINTTAQGGAYLFGTWGSAVSNLFYSHGNSGKS 616 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,566,853 Number of Sequences: 219361 Number of extensions: 1438213 Number of successful extensions: 3395 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3395 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)