ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470957.1| Oryza sativa (japonica cultivar-group), predic... 525 e-146
2dbj|AK101740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 525 e-146
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
4emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 161 4e-36
5ref|NM_125840.1| Arabidopsis thaliana amidase AT5G64440 mRNA, co... 46 0.14
6gb|BT013475.1| Lycopersicon esculentum clone 132142R, mRNA sequence 46 0.14
7gb|AY308736.1| Arabidopsis thaliana N-acylethanolamine amidohydr... 46 0.14
8gb|AY143870.1| Arabidopsis thaliana At5g64440/T12B11_3 mRNA, com... 46 0.14
9gb|AY057501.1| Arabidopsis thaliana AT5g64440/T12B11_3 mRNA, com... 46 0.14
10emb|BX829997.1|CNS09YPW Arabidopsis thaliana Full-length cDNA Co... 46 0.14
11gb|AF223949.1|AF223949 Arabidopsis thaliana amidase mRNA, comple... 46 0.14
12dbj|AB025640.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 46 0.14
13ref|XM_677172.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.3
14gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, com... 42 2.3
15emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on ch... 42 2.3
16gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 8.9
17gb|AE006254.1| Lactococcus lactis subsp. lactis IL1403 section 1... 40 8.9
18gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome... 40 8.9
19emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23... 40 8.9
20gb|AC122235.5| Mus musculus BAC clone RP23-139H6 from chromosome... 40 8.9
21gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete se... 40 8.9
22emb|AL928906.4| Zebrafish DNA sequence from clone RP71-34G2 in l... 40 8.9
23gb|DQ091761.1| Medicago truncatula N-acylethanolamine amidohydro... 40 8.9
24gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, compl... 40 8.9
25gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome ... 40 8.9
26gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14... 40 8.9
27gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, co... 40 8.9
28gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 8.9
29emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-3... 40 8.9
30gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 ... 40 8.9
31emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-6... 40 8.9
32gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 8.9
33emb|AL929218.3| Mouse DNA sequence from clone RP23-447G18 on chr... 40 8.9 
>ref|XM_470957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1806

 Score =  525 bits (265), Expect = e-146
 Identities = 529/617 (85%)
 Strand = Plus / Plus

                                                                        
Query: 32   acattttttgacgaaatccgccctgtggagaaagacgctgtcgccgtttctcgtttacgg 91
            |||||||| ||| |||| ||| |||||||||||||||| ||    ||| ||||||| |||
Sbjct: 640  acatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcgg 699

                                                                        
Query: 92   aaatgtggagtgatctttattgggaaagcaaatatgcacgagctaggccttggggtcact 151
            |||||||||||| | || ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 700  aaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaact 759

                                                                        
Query: 152  ggaaacaatccaaactatgggacagtaagaaatccacattcaatcgatagatatactggt 211
            |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 760  ggaaacaatccaaactatggaacagcaagaaatccacattcaattgatagatatactggt 819

                                                                        
Query: 212  ggttcttcatctggtccagctgcacttgtctcatcagggttatgttcaggagctattgga 271
            ||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||
Sbjct: 820  ggttcttcatcaggtccagctgcactagtctcatcagggttatgctcagcagcaattgga 879

                                                                        
Query: 272  acagatggcggaggctcagttcgaataccatcctctctatgtggaatagttggtttgaag 331
            |||||||| ||||| || ||| | |||||||| ||||||||||| ||  |||||||||||
Sbjct: 880  acagatggtggaggttctgttaggataccatcttctctatgtggcattattggtttgaag 939

                                                                        
Query: 332  acaacatatgggcgcacagatatgactggggtcgtttgtgatgctgggactgttgaagtt 391
            ||||| || || || ||||||||||||||||   ||||||||  |||||| |||||||||
Sbjct: 940  acaacctacggacggacagatatgactggggcactttgtgattgtgggaccgttgaagtt 999

                                                                        
Query: 392  gcttcacctcttacatcatcagtggaggattctatgctattgtattctgcactagcaggc 451
            ||||| |||||  || | |||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 1000 gcttctcctctagcagcttcagtggaggatgctttgctagtgtattctgcaatagcaggc 1059

                                                                        
Query: 452  tctagacccatggacaaacttactctgagatcttccccgctgtgtgttcctaacttggtg 511
            ||||| || ||||| || ||||| |||||| | || ||||| ||||| ||||| ||||||
Sbjct: 1060 tctaggcctatggataagcttaccctgagaccatcaccgctctgtgtccctaatttggtg 1119

                                                                        
Query: 512  tcctccgagaacagcaacatcctgcaatcggtgaaagtgggaaaatatacagagtggttt 571
            ||  | || |||| ||| || |||  |||||||||| | ||||||||||| |||||||||
Sbjct: 1120 tctcctgacaacaacaatatactgggatcggtgaaaataggaaaatatactgagtggttt 1179

                                                                        
Query: 572  catgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacctcctatgc 631
            ||||||||| | |||  |||  |||| ||||||||||| |||||||||||||| || |||
Sbjct: 1180 catgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaaccttctttgc 1239

                             
Query: 632  agcaccttcggatgtca 648
            |||| ||||||||||||
Sbjct: 1240 agcagcttcggatgtca 1256
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>dbj|AK101740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061L19, full
            insert sequence
          Length = 2087

 Score =  525 bits (265), Expect = e-146
 Identities = 529/617 (85%)
 Strand = Plus / Plus

                                                                        
Query: 32   acattttttgacgaaatccgccctgtggagaaagacgctgtcgccgtttctcgtttacgg 91
            |||||||| ||| |||| ||| |||||||||||||||| ||    ||| ||||||| |||
Sbjct: 781  acatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcgg 840

                                                                        
Query: 92   aaatgtggagtgatctttattgggaaagcaaatatgcacgagctaggccttggggtcact 151
            |||||||||||| | || ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 841  aaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaact 900

                                                                        
Query: 152  ggaaacaatccaaactatgggacagtaagaaatccacattcaatcgatagatatactggt 211
            |||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 901  ggaaacaatccaaactatggaacagcaagaaatccacattcaattgatagatatactggt 960

                                                                        
Query: 212  ggttcttcatctggtccagctgcacttgtctcatcagggttatgttcaggagctattgga 271
            ||||||||||| |||||||||||||| ||||||||||||||||| |||| ||| ||||||
Sbjct: 961  ggttcttcatcaggtccagctgcactagtctcatcagggttatgctcagcagcaattgga 1020

                                                                        
Query: 272  acagatggcggaggctcagttcgaataccatcctctctatgtggaatagttggtttgaag 331
            |||||||| ||||| || ||| | |||||||| ||||||||||| ||  |||||||||||
Sbjct: 1021 acagatggtggaggttctgttaggataccatcttctctatgtggcattattggtttgaag 1080

                                                                        
Query: 332  acaacatatgggcgcacagatatgactggggtcgtttgtgatgctgggactgttgaagtt 391
            ||||| || || || ||||||||||||||||   ||||||||  |||||| |||||||||
Sbjct: 1081 acaacctacggacggacagatatgactggggcactttgtgattgtgggaccgttgaagtt 1140

                                                                        
Query: 392  gcttcacctcttacatcatcagtggaggattctatgctattgtattctgcactagcaggc 451
            ||||| |||||  || | |||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 1141 gcttctcctctagcagcttcagtggaggatgctttgctagtgtattctgcaatagcaggc 1200

                                                                        
Query: 452  tctagacccatggacaaacttactctgagatcttccccgctgtgtgttcctaacttggtg 511
            ||||| || ||||| || ||||| |||||| | || ||||| ||||| ||||| ||||||
Sbjct: 1201 tctaggcctatggataagcttaccctgagaccatcaccgctctgtgtccctaatttggtg 1260

                                                                        
Query: 512  tcctccgagaacagcaacatcctgcaatcggtgaaagtgggaaaatatacagagtggttt 571
            ||  | || |||| ||| || |||  |||||||||| | ||||||||||| |||||||||
Sbjct: 1261 tctcctgacaacaacaatatactgggatcggtgaaaataggaaaatatactgagtggttt 1320

                                                                        
Query: 572  catgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacctcctatgc 631
            ||||||||| | |||  |||  |||| ||||||||||| |||||||||||||| || |||
Sbjct: 1321 catgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaaccttctttgc 1380

                             
Query: 632  agcaccttcggatgtca 648
            |||| ||||||||||||
Sbjct: 1381 agcagcttcggatgtca 1397
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  161 bits (81), Expect = 4e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                          
Query: 173    acagtaagaaatccacattcaatcgatagatatactggtggttcttcatctggtccagct 232
              |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 183679 acagcaagaaatccacattcaattgatagatatactggtggttcttcatcaggtccagct 183620

                                                                   
Query: 233    gcacttgtctcatcagggttatgttcaggagctattggaacagatggcggagg 285
              ||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||
Sbjct: 183619 gcactagtctcatcagggttatgctcagcagcaattggaacagatggtggagg 183567



 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                          
Query: 32     acattttttgacgaaatccgccctgtggagaaagacgctgtcgccgtttctcgtttacgg 91
              |||||||| ||| |||| ||| |||||||||||||||| ||    ||| ||||||| |||
Sbjct: 184195 acatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcgg 184136

                                                                          
Query: 92     aaatgtggagtgatctttattgggaaagcaaatatgcacgagctaggccttggggtcact 151
              |||||||||||| | || ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 184135 aaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaact 184076

                                   
Query: 152    ggaaacaatccaaactatggg 172
              |||||||||||||||||||||
Sbjct: 184075 ggaaacaatccaaactatggg 184055



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 564    agtggtttcatgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacc 623
              ||||||||||||||||| | |||  |||  |||| ||||||||||| |||||||||||||
Sbjct: 182155 agtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaacc 182096

                                       
Query: 624    tcctatgcagcaccttcggatgtca 648
              | || ||||||| ||||||||||||
Sbjct: 182095 ttctttgcagcagcttcggatgtca 182071



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                          
Query: 296    ataccatcctctctatgtggaatagttggtttgaagacaacatatgggcgcacagatatg 355
              |||||||| ||||||||||| ||  |||||||||||||||| || || || |||||||||
Sbjct: 183475 ataccatcttctctatgtggcattattggtttgaagacaacctacggacggacagatatg 183416

                    
Query: 356    actggg 361
              ||||||
Sbjct: 183415 actggg 183410



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 366    tttgtgatgctgggactgttgaagttgcttcacctcttacatcatcagtggaggattcta 425
              ||||||||  |||||| |||||||||||||| |||||  || | |||||||||||| || 
Sbjct: 183114 tttgtgattgtgggaccgttgaagttgcttctcctctagcagcttcagtggaggatgctt 183055

                        
Query: 426    tgctattgta 435
              ||||| ||||
Sbjct: 183054 tgctagtgta 183045



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 433    gtattctgcactagcaggctctagacccatggacaaacttactctgaga 481
              |||||||||| ||||||||||||| || ||||| || ||||| ||||||
Sbjct: 182880 gtattctgcaatagcaggctctaggcctatggataagcttaccctgaga 182832
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
              complete sequence
          Length = 145517

 Score =  161 bits (81), Expect = 4e-36
 Identities = 105/113 (92%)
 Strand = Plus / Minus

                                                                          
Query: 173    acagtaagaaatccacattcaatcgatagatatactggtggttcttcatctggtccagct 232
              |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 114966 acagcaagaaatccacattcaattgatagatatactggtggttcttcatcaggtccagct 114907

                                                                   
Query: 233    gcacttgtctcatcagggttatgttcaggagctattggaacagatggcggagg 285
              ||||| ||||||||||||||||| |||| ||| |||||||||||||| |||||
Sbjct: 114906 gcactagtctcatcagggttatgctcagcagcaattggaacagatggtggagg 114854



 Score =  137 bits (69), Expect = 5e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                          
Query: 32     acattttttgacgaaatccgccctgtggagaaagacgctgtcgccgtttctcgtttacgg 91
              |||||||| ||| |||| ||| |||||||||||||||| ||    ||| ||||||| |||
Sbjct: 115482 acatttttcgacaaaattcgctctgtggagaaagacgcagtttgtgttgctcgtttgcgg 115423

                                                                          
Query: 92     aaatgtggagtgatctttattgggaaagcaaatatgcacgagctaggccttggggtcact 151
              |||||||||||| | || ||||||||||| |||||||| |||||||||||||| || |||
Sbjct: 115422 aaatgtggagtgttattcattgggaaagctaatatgcatgagctaggccttggagtaact 115363

                                   
Query: 152    ggaaacaatccaaactatggg 172
              |||||||||||||||||||||
Sbjct: 115362 ggaaacaatccaaactatggg 115342



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                          
Query: 564    agtggtttcatgatgtccctgataatgaggtctcaaatacatgtgaagatgcacttaacc 623
              ||||||||||||||||| | |||  |||  |||| ||||||||||| |||||||||||||
Sbjct: 113442 agtggtttcatgatgtctccgatcgtgatatctctaatacatgtgaggatgcacttaacc 113383

                                       
Query: 624    tcctatgcagcaccttcggatgtca 648
              | || ||||||| ||||||||||||
Sbjct: 113382 ttctttgcagcagcttcggatgtca 113358



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                          
Query: 296    ataccatcctctctatgtggaatagttggtttgaagacaacatatgggcgcacagatatg 355
              |||||||| ||||||||||| ||  |||||||||||||||| || || || |||||||||
Sbjct: 114762 ataccatcttctctatgtggcattattggtttgaagacaacctacggacggacagatatg 114703

                    
Query: 356    actggg 361
              ||||||
Sbjct: 114702 actggg 114697



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 366    tttgtgatgctgggactgttgaagttgcttcacctcttacatcatcagtggaggattcta 425
              ||||||||  |||||| |||||||||||||| |||||  || | |||||||||||| || 
Sbjct: 114401 tttgtgattgtgggaccgttgaagttgcttctcctctagcagcttcagtggaggatgctt 114342

                        
Query: 426    tgctattgta 435
              ||||| ||||
Sbjct: 114341 tgctagtgta 114332



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 433    gtattctgcactagcaggctctagacccatggacaaacttactctgaga 481
              |||||||||| ||||||||||||| || ||||| || ||||| ||||||
Sbjct: 114167 gtattctgcaatagcaggctctaggcctatggataagcttaccctgaga 114119
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>ref|NM_125840.1| Arabidopsis thaliana amidase AT5G64440 mRNA, complete cds
          Length = 2165

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 1107 tgaagacaacatatggtcggacagatatgac 1137
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>gb|BT013475.1| Lycopersicon esculentum clone 132142R, mRNA sequence
          Length = 2027

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 148  cactggaaacaatccaaactatgggac 174
            ||||||||||||| |||||||||||||
Sbjct: 1172 cactggaaacaatgcaaactatgggac 1198
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>gb|AY308736.1| Arabidopsis thaliana N-acylethanolamine amidohydrolase mRNA, complete
            cds
          Length = 2095

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 1070 tgaagacaacatatggtcggacagatatgac 1100
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>gb|AY143870.1| Arabidopsis thaliana At5g64440/T12B11_3 mRNA, complete cds
          Length = 1074

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 327 tgaagacaacatatgggcgcacagatatgac 357
           |||||||||||||||| || |||||||||||
Sbjct: 203 tgaagacaacatatggtcggacagatatgac 233
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>gb|AY057501.1| Arabidopsis thaliana AT5g64440/T12B11_3 mRNA, complete cds
          Length = 2143

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 1078 tgaagacaacatatggtcggacagatatgac 1108
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>emb|BX829997.1|CNS09YPW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB52ZC06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2311

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 1107 tgaagacaacatatggtcggacagatatgac 1137
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>gb|AF223949.1|AF223949 Arabidopsis thaliana amidase mRNA, complete cds
          Length = 2165

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 1107 tgaagacaacatatggtcggacagatatgac 1137
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>dbj|AB025640.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:T12B11
          Length = 22022

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 327  tgaagacaacatatgggcgcacagatatgac 357
            |||||||||||||||| || |||||||||||
Sbjct: 9216 tgaagacaacatatggtcggacagatatgac 9246
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>ref|XM_677172.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8995.2), mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 365 gtttgtgatgctgggactgtt 385
           |||||||||||||||||||||
Sbjct: 621 gtttgtgatgctgggactgtt 641
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>gb|AC101800.8| Mus musculus chromosome 1, clone RP24-219K10, complete sequence
          Length = 177147

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cacctcttacatcatcagtgg 416
              |||||||||||||||||||||
Sbjct: 158665 cacctcttacatcatcagtgg 158685
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>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two
              novel genes, complete sequence
          Length = 159399

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    cacctcttacatcatcagtgg 416
              |||||||||||||||||||||
Sbjct: 102043 cacctcttacatcatcagtgg 102063
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 478     gagatcttccccgctgtgtg 497
               ||||||||||||||||||||
Sbjct: 2531357 gagatcttccccgctgtgtg 2531338
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>gb|AE006254.1| Lactococcus lactis subsp. lactis IL1403 section 16 of 218 of the
            complete genome
          Length = 11202

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  ctggtggttcttcatctggt 226
            ||||||||||||||||||||
Sbjct: 1081 ctggtggttcttcatctggt 1100
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>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 558    atacagagtggtttcatgatgtccctga 585
              ||||| |||| |||||||||||||||||
Sbjct: 151304 atacatagtgttttcatgatgtccctga 151331
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>emb|CT009528.9| M.truncatula DNA sequence from clone MTH2-168J23 on chromosome 3,
             complete sequence
          Length = 129215

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   ggtttgaagacaacatatgggcgc 346
             ||||||||| ||||||||||||||
Sbjct: 64525 ggtttgaagccaacatatgggcgc 64548
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>gb|AC122235.5| Mus musculus BAC clone RP23-139H6 from chromosome 12, complete sequence
          Length = 190293

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   tgcttcacctcttacatcat 410
             ||||||||||||||||||||
Sbjct: 91179 tgcttcacctcttacatcat 91160
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>gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete sequence
          Length = 133868

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 197 gatagatatactggtggttcttcatctggtccagctgcacttgt 240
           ||||| ||||||||||| || || || |||||||||||| ||||
Sbjct: 703 gataggtatactggtggatcctcttcaggtccagctgcaattgt 746
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>emb|AL928906.4| Zebrafish DNA sequence from clone RP71-34G2 in linkage group 7 Contains
             a novel gene, a novel gene similar to human and mouse
             ORCL6 (origin recognition complex, subunit 6 homolog-like
             (yeast)), a novel gene simlar to human and mouse VPS35
             (vacuolar protein sorting 35 (yeast)),  a novel gene
             similar to human HRH3 (histamine receptor H3), a novel
             gene similar to human and rat ARL5 (ADP-ribosylation
             factor-like 5) and a CpG island, complete sequence
          Length = 161527

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   attctatgctattgtattct 439
             ||||||||||||||||||||
Sbjct: 12950 attctatgctattgtattct 12931
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>gb|DQ091761.1| Medicago truncatula N-acylethanolamine amidohydrolase mRNA,
           complete cds
          Length = 2336

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 197 gatagatatactggtggttcttcatctggtccagctgcacttgt 240
           ||||| ||||||||||| || || || |||||||||||| ||||
Sbjct: 941 gataggtatactggtggatcctcttcaggtccagctgcaattgt 984
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>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 372   atgctgggactgttgaagttgctt 395
             |||||| |||||||||||||||||
Sbjct: 66775 atgctgagactgttgaagttgctt 66798
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>gb|AC158519.2| Mus musculus BAC clone RP24-87O4 from chromosome 14, complete
            sequence
          Length = 236374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 551  ggaaaatatacagagtggtttcat 574
            |||||||||||||| |||||||||
Sbjct: 7408 ggaaaatatacagattggtttcat 7431
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>gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14L22 genomic sequence, complete
             sequence
          Length = 95581

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 312   gtggaatagttggtttgaagacaa 335
             ||||||||||||||||||| ||||
Sbjct: 88507 gtggaatagttggtttgaaaacaa 88530
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>gb|AC116892.10| Mus musculus chromosome 8, clone RP24-529J16, complete sequence
          Length = 176340

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   ctcaaatacatgtgaagatg 614
             ||||||||||||||||||||
Sbjct: 78033 ctcaaatacatgtgaagatg 78052
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>gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-17k4, complete sequence
          Length = 108273

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 197   gatagatatactggtggttcttcatctggtccagctgcacttgt 240
             ||||| ||||||||||| || || || |||||||||||| ||||
Sbjct: 94967 gataggtatactggtggatcctcttcaggtccagctgcaattgt 95010
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>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 552    gaaaatatacagagtggtttcatg 575
              |||||||||||||||| |||||||
Sbjct: 178857 gaaaatatacagagtgttttcatg 178834
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>gb|AC006216.1|F5F19 Arabidopsis thaliana chromosome 1 BAC F5F19 sequence, complete
            sequence
          Length = 110893

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 312  gtggaatagttggtttgaagacaa 335
            ||||||||||||||||||| ||||
Sbjct: 2316 gtggaatagttggtttgaaaacaa 2339
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>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196311

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 552    gaaaatatacagagtggtttcatg 575
              |||||||||||||||| |||||||
Sbjct: 182615 gaaaatatacagagtgttttcatg 182638
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 113     gggaaagcaaatatgcacgagcta 136
               ||||||||||||| ||||||||||
Sbjct: 1228559 gggaaagcaaataagcacgagcta 1228582
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>emb|AL929218.3| Mouse DNA sequence from clone RP23-447G18 on chromosome 2, complete
             sequence
          Length = 58449

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   aaatatacagagtggtttca 573
             ||||||||||||||||||||
Sbjct: 50831 aaatatacagagtggtttca 50850


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,348,862
Number of Sequences: 3902068
Number of extensions: 5348862
Number of successful extensions: 90206
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90080
Number of HSP's gapped (non-prelim): 120
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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