| Clone Name | bags6b03 |
|---|---|
| Clone Library Name | barley_pub |
>GHRHR_RAT (Q02644) Growth hormone-releasing hormone receptor precursor (GHRH| receptor) (GRF receptor) (GRFR) Length = 464 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 2 LLLRRINKSQGGLYPRMQLCQALVFLASSRVGMGHSCPSP 121 +LLR++ +QGGL+ R Q C L + SCP P Sbjct: 306 ILLRKLGPAQGGLHTRAQYCNYL---------LPWSCPLP 336
>CTXA_CARAL (Q9GNN8) Toxin A precursor (CaTX-A)| Length = 463 Score = 28.9 bits (63), Expect = 3.6 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 81 HQAGWAWGTAVQAPAKESY 137 H GW WGTA + P ++ Y Sbjct: 396 HAQGWGWGTADEDPGEQGY 414
>SYFB_ACIAD (Q6F873) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 793 Score = 28.1 bits (61), Expect = 6.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 119 PGERKLSARKLHQVEISGFACGAGTILLQ 205 PGE K+ KL +E G CGA I L+ Sbjct: 100 PGEFKIKKGKLRGIESQGMLCGASEIDLE 128
>MPDZ_HUMAN (O75970) Multiple PDZ domain protein (Multi PDZ domain protein 1)| (Multi-PDZ-domain protein 1) Length = 2042 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 59 CQALVFLASSRVGMGHSCPSPGERKLSARKLHQVEISGFACGAGTI 196 C+ + ++ R G+G S + L A +H+V G AC G + Sbjct: 1626 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRL 1671
>YNM5_YEAST (P53918) Hypothetical 73.8 kDa protein in SPC98-TOM70 intergenic| region Length = 673 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 1 VTTPADQQESRWFISKDAVVSGLGLLGIKQGG 96 + PA WF+ K AV G+ LLG GG Sbjct: 323 IFVPATTVLPGWFLKKRAVAMGVSLLGTGAGG 354 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,390,667 Number of Sequences: 219361 Number of extensions: 652621 Number of successful extensions: 1508 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1508 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)