| Clone Name | bags5m02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 648 bits (327), Expect = 0.0 Identities = 372/387 (96%) Strand = Plus / Plus Query: 1 tggcaatcagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttc 60 |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 2 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 61 Query: 61 tggagcatgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 121 Query: 121 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 acaacgcctgccatttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 181 Query: 181 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 241 Query: 241 acggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgaca 300 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 242 ccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctgtgaca 301 Query: 301 acatggacaatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaaca 360 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 302 acatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacg 361 Query: 361 catgtgtccgtttctgtaatgatggtg 387 |||||| |||||||||||||||||||| Sbjct: 362 catgtgcccgtttctgtaatgatggtg 388
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 632 bits (319), Expect = e-178 Identities = 370/387 (95%) Strand = Plus / Plus Query: 1 tggcaatcagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttc 60 |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 45 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 104 Query: 61 tggagcatgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 120 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105 tggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgct 164 Query: 121 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 165 acaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgta 224 Query: 181 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 284 Query: 241 acggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgaca 300 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 285 ccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgaca 344 Query: 301 acatggacaatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaaca 360 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 345 acatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacg 404 Query: 361 catgtgtccgtttctgtaatgatggtg 387 |||||| |||||||||||||||||||| Sbjct: 405 catgtgcccgtttctgtaatgatggtg 431
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 632 bits (319), Expect = e-178 Identities = 370/387 (95%) Strand = Plus / Plus Query: 1 tggcaatcagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttc 60 |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 45 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 104 Query: 61 tggagcatgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 120 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105 tggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgct 164 Query: 121 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 165 acaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgta 224 Query: 181 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 284 Query: 241 acggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgaca 300 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 285 ccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgaca 344 Query: 301 acatggacaatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaaca 360 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 345 acatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacg 404 Query: 361 catgtgtccgtttctgtaatgatggtg 387 |||||| |||||||||||||||||||| Sbjct: 405 catgtgcccgtttctgtaatgatggtg 431
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 632 bits (319), Expect = e-178 Identities = 370/387 (95%) Strand = Plus / Plus Query: 1 tggcaatcagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttc 60 |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 45 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 104 Query: 61 tggagcatgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 120 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105 tggagcaggtccaagtagaagccaagagttgctgcaagaacacgacgggcagaaactgct 164 Query: 121 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 165 acaacgcctgccgtttcgctggtggttcccgaccagtctgcgcaactgcttgtggttgta 224 Query: 181 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 284 Query: 241 acggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgaca 300 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 285 ccggtgaaccaaatgcgactgagtactgcacaattggatgccggacttccgtctgtgaca 344 Query: 301 acatggacaatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaaca 360 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 345 acatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacg 404 Query: 361 catgtgtccgtttctgtaatgatggtg 387 |||||| |||||||||||||||||||| Sbjct: 405 catgtgcccgtttctgtaatgatggtg 431
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 622 bits (314), Expect = e-175 Identities = 347/358 (96%) Strand = Plus / Plus Query: 30 gttatttgtgttctcatactgggtttagttctggagcatgtccaagtagaaggcaagagt 89 |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 60 Query: 90 tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcc 149 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 61 tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcc 120 Query: 150 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 180 Query: 210 gactatcctaagctgaatcttctccctgaatacggtgaaccaaatgcgactgagtactgc 269 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 181 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 240 Query: 270 acaattggatgcatgacttccgtttgtgacaacatggacaatgtttttcgtggccaagag 329 ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 241 acaattggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagag 300 Query: 330 atgaaattcaacatgggactctgcagcaacacatgtgtccgtttctgtaatgatggtg 387 ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 301 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtg 358
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 460 bits (232), Expect = e-126 Identities = 262/272 (96%) Strand = Plus / Plus Query: 116 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60 Query: 176 ttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccc 235 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 61 ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120 Query: 236 tgaatacggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttg 295 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180 Query: 296 tgacaacatggacaatgtttttcgtggccaagagatgaaattcaacatgggactctgcag 355 ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240 Query: 356 caacacatgtgtccgtttctgtaatgatggtg 387 |||| |||||| |||||||||||||||||||| Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtg 272
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 422 bits (213), Expect = e-115 Identities = 237/245 (96%) Strand = Plus / Plus Query: 1 tggcaatcagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttc 60 |||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct: 1553 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 1612 Query: 61 tggagcatgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 120 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1613 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 1672 Query: 121 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1673 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 1732 Query: 181 aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1733 aaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccctgaat 1792 Query: 241 acggt 245 |||| Sbjct: 1793 ccggt 1797 Score = 123 bits (62), Expect = 4e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 243 ggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgacaac 302 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953 Query: 303 atggacaatg 312 |||||||||| Sbjct: 1954 atggacaatg 1963 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 318 cgtggccaagagatgaaattcaacatgggactctgcagcaacacatgtgtccgtttctgt 377 |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 2060 cgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgtttctgt 2119 Query: 378 aatgatggtg 387 |||||||||| Sbjct: 2120 aatgatggtg 2129
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 414 bits (209), Expect = e-113 Identities = 338/381 (88%) Strand = Plus / Plus Query: 8 cagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttctggagca 67 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagttctggagca 86 Query: 68 tgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgc 127 ||||| || || || || |||||||||||| ||||| | ||||||||||||||| | Sbjct: 87 ggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacac 146 Query: 128 ctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcat 187 |||| |||||| ||||||||||| |||||||||||| ||||||| ||||||||||||| Sbjct: 147 ttgccatttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcat 206 Query: 188 aagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatacggtga 247 ||| || |||| ||| ||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 207 aagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaatccggtga 266 Query: 248 accaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgacaacatgga 307 |||| ||| || |||||||||| |||||||||| || ||| || |||||||||||||| Sbjct: 267 accagatgtcacgcagtactgcaccattggatgcaggaattctgtctgtgacaacatgga 326 Query: 308 caatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaacacatgtgt 367 ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 327 caatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgc 386 Query: 368 ccgtttctgtaatgatggtgc 388 ||||||||||||||||||||| Sbjct: 387 ccgtttctgtaatgatggtgc 407
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 414 bits (209), Expect = e-113 Identities = 338/381 (88%) Strand = Plus / Plus Query: 8 cagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttctggagca 67 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 34 cagcaagagtattaagagtgtggtcatttgtgttctcatactgggtttagttctggagca 93 Query: 68 tgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgc 127 ||||| || || || || |||||||||||| ||||| | ||||||||||||||| | Sbjct: 94 ggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacac 153 Query: 128 ctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcat 187 ||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||| Sbjct: 154 ttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcat 213 Query: 188 aagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatacggtga 247 ||| || |||| ||| ||||| ||||||||||| || |||||||||||||||| |||||| Sbjct: 214 aagtggtccaaaatgccctagtgactatcctaaacttaatcttctccctgaatccggtga 273 Query: 248 accaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgacaacatgga 307 |||| ||| ||| |||||||||| |||||||||| || ||| || |||||||||||||| Sbjct: 274 accagatgtcactcagtactgcaccattggatgcaggaattctgtctgtgacaacatgga 333 Query: 308 caatgtttttcgtggccaagagatgaaattcaacatgggactctgcagcaacacatgtgt 367 ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 334 caatgttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgc 393 Query: 368 ccgtttctgtaatgatggtgc 388 |||||| |||||||||||||| Sbjct: 394 ccgtttttgtaatgatggtgc 414
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 250 bits (126), Expect = 3e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 155 agtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggacta 214 |||||||||| ||||||| |||||||||||||||| || |||| ||| ||||| ||||| Sbjct: 1 agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60 Query: 215 tcctaagctgaatcttctccctgaatacggtgaaccaaatgcgactgagtactgcacaat 274 |||||| || |||||||||||||||| ||||||||| ||| ||| |||||||||| || Sbjct: 61 tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120 Query: 275 tggatgcatgacttccgtttgtgacaacatggacaatgtttttcgtggccaagagatgaa 334 |||||||| || ||| || ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180 Query: 335 attcaacatgggactctgcagcaacacatgtgtccgtttctgtaatgatggtgc 388 |||| |||||||||||||||||||| |||||| |||||| |||||||||||||| Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgc 234
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 242 bits (122), Expect = 7e-61 Identities = 209/238 (87%) Strand = Plus / Plus Query: 8 cagcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttctggagca 67 ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1539 cagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagttctggagca 1598 Query: 68 tgtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgc 127 ||||| || || || || |||||||||||| ||||| | ||||||||||||||| | Sbjct: 1599 ggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgctacaacac 1658 Query: 128 ctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcat 187 ||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||| Sbjct: 1659 ttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgtaaaatcat 1718 Query: 188 aagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatacggt 245 ||| || |||| ||| ||||| ||||||||||| ||||||||||||||||||| |||| Sbjct: 1719 aagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaatccggt 1776 Score = 121 bits (61), Expect = 2e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 312 gtttttcgtggccaagagatgaaattcaacatgggactctgcagcaacacatgtgtccgt 371 ||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| |||| Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090 Query: 372 ttctgtaatgatggtgc 388 ||||||||||||||||| Sbjct: 2091 ttctgtaatgatggtgc 2107 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 243 ggtgaaccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgacaac 302 ||||||||| ||| ||| |||||||||| |||||||||| || ||| || ||||||||| Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927 Query: 303 atggacaatg 312 |||||||||| Sbjct: 1928 atggacaatg 1937
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 198 bits (100), Expect = 9e-48 Identities = 247/296 (83%) Strand = Plus / Plus Query: 9 agcaagagtattaaaagtgtggttatttgtgttctcatactgggtttagttctggagcat 68 |||||| |||| || |||| ||||||||| | ||||| |||||||||||||||||||| Sbjct: 91 agcaagggtatcaagagtgctgttatttgtttcctcatgctgggtttagttctggagcag 150 Query: 69 gtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcc 128 ||||| ||||| ||||||||||||||||||| |||||||| | |||||||||||| | | Sbjct: 151 gtccaggtagagggcaagagttgctgcaagagcacgacggcaataaactgctacaatgtc 210 Query: 129 tgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcata 188 |||||||| || |||| | | || |||||||||||| | | |||||||||||| || || Sbjct: 211 tgccgtttagctggtgctccgcgcccagtctgcgcaggtccatgtggttgtaaactctta 270 Query: 189 agcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaatacggtgaa 248 || |||| ||||| || || | ||||| | | |||||||| |||||||||||||| Sbjct: 271 gacgttacaacttgtccaagtgattggcctaaacagcatcttctctctgaatacggtgaa 330 Query: 249 ccaaatgcgactgagtactgcacaattggatgcatgacttccgtttgtgacaacat 304 || |||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 331 gcagatgcagctgagtactgcactattggatgcatgacttccgtttgtgacaacat 386 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 316 ttcgtggccaagagatgaaattcaacatgggactctgcagcaacacatgtgtccgtttct 375 ||||||||||||||||||| || ||||| | |||||| |||| ||||||||||||||| Sbjct: 413 ttcgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttct 472 Query: 376 gtaa 379 |||| Sbjct: 473 gtaa 476
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 192 bits (97), Expect = 6e-46 Identities = 291/355 (81%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 25 gtgtggttatttgtgttctcatactgggtttagttctggagcatgtccaagtagaaggca 84 ||||||| ||||||| ||| |||| ||||||||||||| ||| ||||| ||||| || | Sbjct: 74 gtgtggtgctttgtgtcctcgtactaggtttagttctggggcaggtccaggtagagggaa 133 Query: 85 agagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtg 144 ||||||||||| || ||| | | ||||||||||| |||| ||||||||| ||||| Sbjct: 134 agagttgctgcccgagcacatctgcaagaaactgctataacgtctgccgtttaaccggta 193 Query: 145 gttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtc 204 |||||| ||| ||||||| || |||||| ||||||||| || ||| |||||||| Sbjct: 194 cttcccggccacgctgcgcatctctttgtggatgtaaaatcgtagacgg---aacatgtc 250 Query: 205 ctagggactatcctaagctgaatcttctccctgaatacggtgaaccaaatgcgactgagt 264 || | |||| |||| ||| ||||||| | ||||| ||||||||| ||| ||||||| Sbjct: 251 ctgatggctattctaaactgcatcttctacttgaatccggtgaaccggatgtcactgagt 310 Query: 265 actgcacaattggatgcatgacttccgtttgtgacaacatggacaatgtttttcgtggcc 324 ||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 311 actgcaccataggatgcatgacttccgtttgtgacaacatggacaatgttattcatggcc 370 Query: 325 aagagatgaaattcaacatgggactctgcagcaacacatgtgtccgtttctgtaa 379 ||||||||||| || ||||| |||||||| ||| |||||| ||||||||||| Sbjct: 371 aagagatgaaaatcgacatgctactctgcaacaaagaatgtgttcgtttctgtaa 425
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 111 bits (56), Expect = 2e-21 Identities = 95/108 (87%) Strand = Plus / Plus Query: 19 ttaaaagtgtggttatttgtgttctcatactgggtttagttctggagcatgtccaagtag 78 |||| |||||||| ||||||||||| || |||| |||||||||||||||||||||||| Sbjct: 42 ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101 Query: 79 aaggcaagagttgctgcaagaacacgacgggcagaaactgctacaacg 126 | || ||||||||||||||| |||| |||| |||||||||||||||| Sbjct: 102 agggaaagagttgctgcaaggacaccacggcaagaaactgctacaacg 149
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || |||||||||||||||||||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 108 Query: 102 acgacgggcagaaactgctacaac 125 || || ||||||||||||||| Sbjct: 109 accctaggaagaaactgctacaac 132
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || ||||||||||||||||||||||||| || | Sbjct: 106 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 165 Query: 102 acgacgggcagaaactgctacaac 125 || ||| ||||||||||||||| Sbjct: 166 accctgggaagaaactgctacaac 189
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || ||||||||||||||||||||||||| || | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 108 Query: 102 acgacgggcagaaactgctacaac 125 || ||| ||||||||||||||| Sbjct: 109 accctgggaagaaactgctacaac 132
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || |||||||||||||||||||||||||||| | Sbjct: 57 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 116 Query: 102 acgacgggcagaaactgctacaac 125 || || ||||||||||||||| Sbjct: 117 accctaggaagaaactgctacaac 140
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || ||||||||||||||||||||||||| || | Sbjct: 94 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 153 Query: 102 acgacgggcagaaactgctacaac 125 || ||| ||||||||||||||| Sbjct: 154 accctgggaagaaactgctacaac 177
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 77.8 bits (39), Expect = 2e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgca 96 ||||||||||| || |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 73 ctcatactggggttggttctggaacatgtgcaagtagaaggcaagagttgctgca 127
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 1e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || || ||||||||||| |||||||||||||||| | Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaagagc 108 Query: 102 acgacgggcagaaactgctacaac 125 || || ||||||||||||||| Sbjct: 109 accctaggaagaaactgctacaac 132
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 55 tagttctggagcatgtccaagtagaaggcaagagttgctgcaag 98 ||||||||||||| ||||||||||| || ||||||||||||||| Sbjct: 79 tagttctggagcaggtccaagtagagggaaagagttgctgcaag 122
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 45 atactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaacacg 104 |||||||| || ||||| || || || ||||||||||||||||||||||||| || ||| Sbjct: 27 atactggggttggttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcacc 86 Query: 105 acgggcagaaactgctacaac 125 || ||||||||||||||| Sbjct: 87 ctaggaagaaactgctacaac 107
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 45 atactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaacacg 104 |||||||| || ||||| || || || ||||||||||||||||||||||||| || ||| Sbjct: 405 atactggggttggttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcacc 464 Query: 105 acgggcagaaactgctacaac 125 || ||||||||||||||| Sbjct: 465 ctaggaagaaactgctacaac 485
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 9e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || | || |||||||||||||| ||||||| || | Sbjct: 49 ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 108 Query: 102 acgacgggcagaaactgctacaac 125 || ||| ||||||||||||||| Sbjct: 109 accctgggaagaaactgctacaac 132
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 9e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 42 ctcatactgggtttagttctggagcatgtccaagtagaaggcaagagttgctgcaagaac 101 ||||||||||| || |||||||| || | || |||||||||||||| ||||||| || | Sbjct: 8 ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 67 Query: 102 acgacgggcagaaactgctacaac 125 || ||| ||||||||||||||| Sbjct: 68 accctgggaagaaactgctacaac 91
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 cttccgtttgtgacaacatggacaa 310 ||||| ||||||||||||||||||| Sbjct: 87262 cttccatttgtgacaacatggacaa 87238
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 agagttgctgcaagaacacg 104 |||||||||||||||||||| Sbjct: 966 agagttgctgcaagaacacg 947
>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence Length = 43887 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tgacttccgtttgtgacaac 302 |||||||||||||||||||| Sbjct: 41226 tgacttccgtttgtgacaac 41207
>emb|CR392364.6| Zebrafish DNA sequence from clone CH211-230I4 in linkage group 17, complete sequence Length = 91506 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 agcaagagtattaaaagtgt 28 |||||||||||||||||||| Sbjct: 21709 agcaagagtattaaaagtgt 21690
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 agagttgctgcaagaacacg 104 |||||||||||||||||||| Sbjct: 54190 agagttgctgcaagaacacg 54209
>emb|BX324225.7| Zebrafish DNA sequence from clone DKEY-180I22 in linkage group 21, complete sequence Length = 207125 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 atgggactctgcagcaacac 361 |||||||||||||||||||| Sbjct: 18760 atgggactctgcagcaacac 18741
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gtttgtgacaacatggacaa 310 |||||||||||||||||||| Sbjct: 53200 gtttgtgacaacatggacaa 53181
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tgtggttatttgtgttctca 45 |||||||||||||||||||| Sbjct: 123343 tgtggttatttgtgttctca 123324 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,990,878 Number of Sequences: 3902068 Number of extensions: 2990878 Number of successful extensions: 54296 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54240 Number of HSP's gapped (non-prelim): 48 length of query: 388 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 366 effective length of database: 17,147,199,772 effective search space: 6275875116552 effective search space used: 6275875116552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)