ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags6a22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF262215.1| Oryza sativa guanine nucleotide-exchange protein ... 383 e-103
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 295 5e-77
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 295 5e-77
4gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 295 5e-77
5ref|NM_115950.2| Arabidopsis thaliana guanyl-nucleotide exchange... 92 2e-15
6emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 62 1e-06
7ref|NM_100076.2| Arabidopsis thaliana guanyl-nucleotide exchange... 54 3e-04
8ref|NM_119981.2| Arabidopsis thaliana guanyl-nucleotide exchange... 46 0.082
9emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 46 0.082
10emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, B... 46 0.082
11ref|XM_464438.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
13dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14gb|AY131267.2| Bacteriophage Lc-Nu, complete genome 40 5.1
15gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome ... 40 5.1
16emb|CT009693.5| Pig DNA sequence from clone PigE-201H15 on chrom... 40 5.1
17gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome... 40 5.1
18gb|AC123831.4| Mus musculus BAC clone RP24-125K16 from chromosom... 40 5.1
19emb|X76123.1|AMCYCL2 A.majus cyclin-2 mRNA 40 5.1
20emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 5.1
21dbj|AK222445.1| Ciona intestinalis mRNA for zinc finger protein,... 40 5.1
22gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map... 40 5.1
23gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Can... 40 5.1
24dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 5.1
25gb|AC005827.3|AC005827 Homo sapiens clone 14503, complete sequence 40 5.1
26emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chro... 40 5.1
27dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 5.1 
>gb|AF262215.1| Oryza sativa guanine nucleotide-exchange protein GEP2 (GEP2) mRNA,
            partial cds
          Length = 5678

 Score =  383 bits (193), Expect = e-103
 Identities = 321/364 (88%)
 Strand = Plus / Plus

                                                                        
Query: 16   ttcctggtttgaaaaagaaggctccaaatgctggtgctgcttctaaaagaggtacttatg 75
            |||||| ||||||||||||| |||||||| ||| | | ||||||||| ||||| | ||||
Sbjct: 3114 ttcctgttttgaaaaagaagtctccaaatactgttccagcttctaaacgaggttcctatg 3173

                                                                        
Query: 76   acagtgctggtgtgggtggaaaagcttctggtgttgatcaaatgaataatgcggtgacaa 135
            | ||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 3174 atagtgctggtgtgggtggcaaagcttctggggttgatcaaatgaacaatgtggtgacaa 3233

                                                                        
Query: 136  tcctcttggagcaagtggggatggctgaaatgaatcgtgtattcataagaagtcaaaatc 195
             |||||| || ||||| || |||||||||||||||||||||||  ||||||||||||| |
Sbjct: 3234 gcctcttagaacaagttggcatggctgaaatgaatcgtgtatttgtaagaagtcaaaaac 3293

                                                                        
Query: 196  tcaacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaac 255
            |||||||||| || |||||||||||||||||||| || ||||| ||||| ||||||||| 
Sbjct: 3294 tcaacagtgagggcataattgattttgtaaaggctctctgtaaagtttccatggaggaat 3353

                                                                        
Query: 256  tgcggtctgcttctgatccacgtgtttttagcctgactaagattgctgaaatcacgcatt 315
            |||| ||||||||||||||||| |||||||| ||||| ||||||| ||| ||  |||| |
Sbjct: 3354 tgcgatctgcttctgatccacgggtttttagtctgacaaagattgttgagattgcgcact 3413

                                                                        
Query: 316  acaatatgaaccgcatcaggcttgnctggtcaagcatatggcacgtcttgtctgaatttt 375
            |||||||||| ||||||||||||| |||||||||||||||||| ||||| ||||| ||||
Sbjct: 3414 acaatatgaatcgcatcaggcttgtctggtcaagcatatggcatgtcttatctgattttt 3473

                
Query: 376  ttgt 379
            ||||
Sbjct: 3474 ttgt 3477
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  295 bits (149), Expect = 5e-77
 Identities = 251/285 (88%)
 Strand = Plus / Minus

                                                                           
Query: 16      ttcctggtttgaaaaagaaggctccaaatgctggtgctgcttctaaaagaggtacttatg 75
               |||||| ||||||||||||| |||||||| ||| | | ||||||||| ||||| | ||||
Sbjct: 7727642 ttcctgttttgaaaaagaagtctccaaatactgttccagcttctaaacgaggttcctatg 7727583

                                                                           
Query: 76      acagtgctggtgtgggtggaaaagcttctggtgttgatcaaatgaataatgcggtgacaa 135
               | ||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 7727582 atagtgctggtgtgggtggcaaagcttctggggttgatcaaatgaacaatgtggtgacaa 7727523

                                                                           
Query: 136     tcctcttggagcaagtggggatggctgaaatgaatcgtgtattcataagaagtcaaaatc 195
                |||||| || ||||| |  |||||||||||||||||||||||  ||||||||||||| |
Sbjct: 7727522 gcctcttagaacaagttgacatggctgaaatgaatcgtgtatttgtaagaagtcaaaaac 7727463

                                                                           
Query: 196     tcaacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaac 255
               |||||||||| || |||||||||||||||||||| || ||||| ||||| ||||||||| 
Sbjct: 7727462 tcaacagtgagggcataattgattttgtaaaggctctctgtaaagtttccatggaggaat 7727403

                                                            
Query: 256     tgcggtctgcttctgatccacgtgtttttagcctgactaagattg 300
               |||| ||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 7727402 tgcgatctgcttctgatccacgggtttttagtctgacaaagattg 7727358



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                           
Query: 315     tacaatatgaaccgcatcaggcttgnctggtcaagcatatggcacgtcttgtctgaattt 374
               ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 7727233 tacaatatgaatcgcatcaggcttgtctggtcaagcatatggcatgtcttgtctgatttt 7727174

                    
Query: 375     tttgt 379
               |||||
Sbjct: 7727173 tttgt 7727169
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  295 bits (149), Expect = 5e-77
 Identities = 251/285 (88%)
 Strand = Plus / Minus

                                                                           
Query: 16      ttcctggtttgaaaaagaaggctccaaatgctggtgctgcttctaaaagaggtacttatg 75
               |||||| ||||||||||||| |||||||| ||| | | ||||||||| ||||| | ||||
Sbjct: 7725477 ttcctgttttgaaaaagaagtctccaaatactgttccagcttctaaacgaggttcctatg 7725418

                                                                           
Query: 76      acagtgctggtgtgggtggaaaagcttctggtgttgatcaaatgaataatgcggtgacaa 135
               | ||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 7725417 atagtgctggtgtgggtggcaaagcttctggggttgatcaaatgaacaatgtggtgacaa 7725358

                                                                           
Query: 136     tcctcttggagcaagtggggatggctgaaatgaatcgtgtattcataagaagtcaaaatc 195
                |||||| || ||||| |  |||||||||||||||||||||||  ||||||||||||| |
Sbjct: 7725357 gcctcttagaacaagttgacatggctgaaatgaatcgtgtatttgtaagaagtcaaaaac 7725298

                                                                           
Query: 196     tcaacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaac 255
               |||||||||| || |||||||||||||||||||| || ||||| ||||| ||||||||| 
Sbjct: 7725297 tcaacagtgagggcataattgattttgtaaaggctctctgtaaagtttccatggaggaat 7725238

                                                            
Query: 256     tgcggtctgcttctgatccacgtgtttttagcctgactaagattg 300
               |||| ||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 7725237 tgcgatctgcttctgatccacgggtttttagtctgacaaagattg 7725193



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                           
Query: 315     tacaatatgaaccgcatcaggcttgnctggtcaagcatatggcacgtcttgtctgaattt 374
               ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 7725068 tacaatatgaatcgcatcaggcttgtctggtcaagcatatggcatgtcttgtctgatttt 7725009

                    
Query: 375     tttgt 379
               |||||
Sbjct: 7725008 tttgt 7725004
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score =  295 bits (149), Expect = 5e-77
 Identities = 251/285 (88%)
 Strand = Plus / Plus

                                                                          
Query: 16     ttcctggtttgaaaaagaaggctccaaatgctggtgctgcttctaaaagaggtacttatg 75
              |||||| ||||||||||||| |||||||| ||| | | ||||||||| ||||| | ||||
Sbjct: 125152 ttcctgttttgaaaaagaagtctccaaatactgttccagcttctaaacgaggttcctatg 125211

                                                                          
Query: 76     acagtgctggtgtgggtggaaaagcttctggtgttgatcaaatgaataatgcggtgacaa 135
              | ||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||
Sbjct: 125212 atagtgctggtgtgggtggcaaagcttctggggttgatcaaatgaacaatgtggtgacaa 125271

                                                                          
Query: 136    tcctcttggagcaagtggggatggctgaaatgaatcgtgtattcataagaagtcaaaatc 195
               |||||| || ||||| |  |||||||||||||||||||||||  ||||||||||||| |
Sbjct: 125272 gcctcttagaacaagttgacatggctgaaatgaatcgtgtatttgtaagaagtcaaaaac 125331

                                                                          
Query: 196    tcaacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaac 255
              |||||||||| || |||||||||||||||||||| || ||||| ||||| ||||||||| 
Sbjct: 125332 tcaacagtgagggcataattgattttgtaaaggctctctgtaaagtttccatggaggaat 125391

                                                           
Query: 256    tgcggtctgcttctgatccacgtgtttttagcctgactaagattg 300
              |||| ||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 125392 tgcgatctgcttctgatccacgggtttttagtctgacaaagattg 125436



 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                          
Query: 315    tacaatatgaaccgcatcaggcttgnctggtcaagcatatggcacgtcttgtctgaattt 374
              ||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||
Sbjct: 125561 tacaatatgaatcgcatcaggcttgtctggtcaagcatatggcatgtcttgtctgatttt 125620

                   
Query: 375    tttgt 379
              |||||
Sbjct: 125621 tttgt 125625
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>ref|NM_115950.2| Arabidopsis thaliana guanyl-nucleotide exchange factor AT3G60860
            mRNA, complete cds
          Length = 5452

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 132/161 (81%)
 Strand = Plus / Plus

                                                                        
Query: 198  aacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaactg 257
            |||||||||| |||||| || ||||| || || || || || ||||| ||||| ||  ||
Sbjct: 3244 aacagtgaagctataatagactttgttaaagctctctgcaaagtttctatggatgagttg 3303

                                                                        
Query: 258  cggtctgcttctgatccacgtgtttttagcctgactaagattgctgaaatcacgcattac 317
            |||||| ||||| ||||||| ||||||||||| || ||||||| ||| ||  ||||||| 
Sbjct: 3304 cggtctccttctaatccacgcgtttttagcctcacaaagattgttgagatagcgcattat 3363

                                                     
Query: 318  aatatgaaccgcatcaggcttgnctggtcaagcatatggca 358
            || ||||| ||||| |||||||  ||||||||||| |||||
Sbjct: 3364 aacatgaatcgcataaggcttgtttggtcaagcatctggca 3404
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>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 85/103 (82%)
 Strand = Plus / Plus

                                                                         
Query: 198   aacagtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaactg 257
             |||||||||| |||||| || ||||| || || || || || ||||| ||||| ||  ||
Sbjct: 90105 aacagtgaagctataatagactttgttaaagctctctgcaaagtttctatggatgagttg 90164

                                                        
Query: 258   cggtctgcttctgatccacgtgtttttagcctgactaagattg 300
             |||||| ||||| ||||||| ||||||||||| || |||||||
Sbjct: 90165 cggtctccttctaatccacgcgtttttagcctcacaaagattg 90207



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 311   gcattacaatatgaaccgcatcaggcttgnctggtcaagcatatggca 358
             |||||| || ||||| ||||| |||||||  ||||||||||| |||||
Sbjct: 90339 gcattataacatgaatcgcataaggcttgtttggtcaagcatctggca 90386
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>ref|NM_100076.2| Arabidopsis thaliana guanyl-nucleotide exchange factor AT1G01960
            mRNA, complete cds
          Length = 5495

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 125/158 (79%)
 Strand = Plus / Plus

                                                                        
Query: 201  agtgaaggtataattgattttgtaaaggccctttgtaaggtttcaatggaggaactgcgg 260
            |||||||  |||||||| ||||| || ||||| || || ||||| ||||| ||  | || 
Sbjct: 3220 agtgaagccataattgactttgttaaagccctctgcaaagtttccatggatgagttacga 3279

                                                                        
Query: 261  tctgcttctgatccacgtgtttttagcctgactaagattgctgaaatcacgcattacaat 320
            ||| | ||||||||||| || || ||||| || |||||||  |||||  |||| || || 
Sbjct: 3280 tctccatctgatccacgggtcttcagcctaacaaagattgtggaaatagcgcactataac 3339

                                                  
Query: 321  atgaaccgcatcaggcttgnctggtcaagcatatggca 358
            ||||||||||| || |||| |||||| ||||| |||||
Sbjct: 3340 atgaaccgcataagacttgtctggtcgagcatctggca 3377
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>ref|NM_119981.2| Arabidopsis thaliana guanyl-nucleotide exchange factor AT4G38200
            mRNA, complete cds
          Length = 5327

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 315  tacaatatgaaccgcatcaggcttgnctggtcaagcatatgg 356
            ||||| ||||||||||||||||| | ||||||  ||||||||
Sbjct: 3151 tacaacatgaaccgcatcaggctagtctggtctcgcatatgg 3192
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>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 315   tacaatatgaaccgcatcaggcttgnctggtcaagcatatgg 356
             ||||| ||||||||||||||||| | ||||||  ||||||||
Sbjct: 28958 tacaacatgaaccgcatcaggctagtctggtctcgcatatgg 28999
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>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20D10 (ESSA project)
          Length = 147215

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 315    tacaatatgaaccgcatcaggcttgnctggtcaagcatatgg 356
              ||||| ||||||||||||||||| | ||||||  ||||||||
Sbjct: 108036 tacaacatgaaccgcatcaggctagtctggtctcgcatatgg 108077
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>ref|XM_464438.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5064

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 310  cgcattacaatatgaaccgcat 331
            ||||||||||||||||||||||
Sbjct: 3134 cgcattacaatatgaaccgcat 3155
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 311     gcattacaatatgaaccgcat 331
               |||||||||||||||||||||
Sbjct: 5223510 gcattacaatatgaaccgcat 5223490
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>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0437H03
          Length = 170173

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 311    gcattacaatatgaaccgcat 331
              |||||||||||||||||||||
Sbjct: 116963 gcattacaatatgaaccgcat 116943
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>gb|AY131267.2| Bacteriophage Lc-Nu, complete genome
          Length = 36466

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ggtataattgattttgtaaa 226
             ||||||||||||||||||||
Sbjct: 31773 ggtataattgattttgtaaa 31754
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>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence
          Length = 235368

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ttggagcaagtggggatggctgaaatga 168
             ||||||||||||||| |||||| |||||
Sbjct: 80888 ttggagcaagtggggctggctggaatga 80915
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>emb|CT009693.5| Pig DNA sequence from clone PigE-201H15 on chromosome 7, complete
             sequence
          Length = 82411

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tgctggtgtgggtggaaaag 99
             ||||||||||||||||||||
Sbjct: 22394 tgctggtgtgggtggaaaag 22413
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>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence
          Length = 211932

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 141    ttggagcaagtggggatggctgaaatga 168
              ||||||||||||||| |||||| |||||
Sbjct: 102128 ttggagcaagtggggctggctggaatga 102101
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>gb|AC123831.4| Mus musculus BAC clone RP24-125K16 from chromosome 14, complete
             sequence
          Length = 181266

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   ttggagcaagtggggatggctgaaatga 168
             ||||||||||||||| |||||| |||||
Sbjct: 42028 ttggagcaagtggggctggctggaatga 42055
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>emb|X76123.1|AMCYCL2 A.majus cyclin-2 mRNA
          Length = 1619

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  tttgaaaaagaaggctccaa 42
           ||||||||||||||||||||
Sbjct: 521 tttgaaaaagaaggctccaa 540
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>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 2/10
          Length = 349887

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     gctggtgtgggtggaaaagc 100
              ||||||||||||||||||||
Sbjct: 340967 gctggtgtgggtggaaaagc 340986
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>dbj|AK222445.1| Ciona intestinalis mRNA for zinc finger protein, complete cds, clone:
            cicl097h03
          Length = 4316

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   tccaaatgctggtgctgctt 57
            ||||||||||||||||||||
Sbjct: 3561 tccaaatgctggtgctgctt 3542
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>gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map B68, complete
             sequence
          Length = 82212

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gcttctaaaagaggtactta 73
             ||||||||||||||||||||
Sbjct: 61759 gcttctaaaagaggtactta 61740
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>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ttcctggtttgaaaaagaag 35
             ||||||||||||||||||||
Sbjct: 87140 ttcctggtttgaaaaagaag 87159
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     gctggtgtgggtggaaaagc 100
              ||||||||||||||||||||
Sbjct: 687515 gctggtgtgggtggaaaagc 687534
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>gb|AC005827.3|AC005827 Homo sapiens clone 14503, complete sequence
          Length = 94376

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ttcctggtttgaaaaagaag 35
             ||||||||||||||||||||
Sbjct: 31461 ttcctggtttgaaaaagaag 31480
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>emb|CT009503.7| Pig DNA sequence from clone CH242-137E23 on chromosome 7, complete
              sequence
          Length = 222099

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tgctggtgtgggtggaaaag 99
              ||||||||||||||||||||
Sbjct: 196720 tgctggtgtgggtggaaaag 196739
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>dbj|AP006689.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT27F14, TM0387,
             complete sequence
          Length = 96031

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    cttctaaaagaggtacttatgaca 78
             |||||||| |||||||||||||||
Sbjct: 13801 cttctaaatgaggtacttatgaca 13778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,825,096
Number of Sequences: 3902068
Number of extensions: 3825096
Number of successful extensions: 65000
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64886
Number of HSP's gapped (non-prelim): 114
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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