ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5l08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017448.1| Zea mays clone EL01N0406C01.c mRNA sequence Length = 770 Score = 460 bits (232), Expect = e-126 Identities = 325/356 (91%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 66 atggtgcagcgtctgacctaccgcaagcggcacagctatgccacgaagtccaaccagacg 125 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 126 cgggtcgtcaagacccctggtggcaagctcgtgtaccagtacaccaagaagagagccagc 185 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || |||||||| || ||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 186 gggcccaagtgtcccgtgaccgggaagaagatccagggcattccccatctgaggccagct 245 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || |||||||| || ||| |||||||||||||||| |||||||||||||||||||| ||| Sbjct: 246 gagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgtccctatggggga 305 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || || |||||||||||||| || ||||||||||||||||||||| ||||||| |||||| Sbjct: 306 gtactatctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagagcag 365 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctcaaa 399 |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 366 aagattgtcaagaaggtgttgaaattacagaagaccaaagacaagacttcctcaaa 421
>gb|AY104935.1| Zea mays PCO108550 mRNA sequence Length = 762 Score = 460 bits (232), Expect = e-126 Identities = 325/356 (91%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 94 atggtgcagcgtctgacctaccgcaagcggcacagctatgccacgaagtccaaccagacg 153 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 154 cgggtcgtcaagacccctggtggcaagctcgtgtaccagtacaccaagaagagagccagc 213 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || |||||||| || ||||||||||||||||||||||| |||||||| || ||||| || Sbjct: 214 gggcccaagtgtcccgtgaccgggaagaagatccagggcattccccatctgaggccagct 273 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || |||||||| || ||| |||||||||||||||| |||||||||||||||||||| ||| Sbjct: 274 gagtacaaaaggtccaggttgtctaggaaccgcagaactgtgaaccgtccctatggggga 333 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || || |||||||||||||| || ||||||||||||||||||||| ||||||| |||||| Sbjct: 334 gtactatctggaactgcagttagagaaaggatcatccgtgctttcctggttgaagagcag 393 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctcaaa 399 |||||||| ||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 394 aagattgtcaagaaggtgttgaaattacagaagaccaaagacaagacttcctcaaa 449
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 647 Score = 418 bits (211), Expect = e-114 Identities = 313/347 (90%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 75 atggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccagacc 134 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 |||||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||| Sbjct: 135 agggtcgtcaagaccccaggtgggaggcttgtgtaccagtacacgaagaagagggcgagc 194 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || |||||||| || |||||||||||||||||||| ||||||||| | |||||| || Sbjct: 195 gggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctgct 254 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || ||||| || || ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 255 gagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtgga 314 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 315 gtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagcag 374 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 390 |||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct: 375 aagattgtcaagaaggtcctgaaaatacagaaaaccaaggacaagac 421
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full insert sequence Length = 647 Score = 410 bits (207), Expect = e-111 Identities = 312/347 (89%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 75 atggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccagacc 134 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 |||||||||||| ||||||||| | ||| |||||||||||||| ||||||||||||||| Sbjct: 135 agggtcgtcaagatcccaggtgggaggcttgtgtaccagtacacgaagaagagggcgagc 194 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || |||||||| || |||||||||||||||||||| ||||||||| | |||||| || Sbjct: 195 gggccgaagtgccccgtcaccgggaagaagatccaggggattccccacttgaggcctgct 254 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || ||||| || || ||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 255 gagtacaagaggtccaggttgtctaggaaccgcaggactgtgaaccgtccatatggtgga 314 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 315 gtgctctctggaactgcagttagggaaaggatcatccgtgctttcttggtcgaggagcag 374 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 390 |||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct: 375 aagattgtcaagaaggtcctgaaaatacagaaaaccaaggacaagac 421
>gb|BT017980.1| Zea mays clone EL01N0525C04.c mRNA sequence Length = 722 Score = 341 bits (172), Expect = 2e-90 Identities = 313/360 (86%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || || ||||||||| | |||||||| || || |||||||||||||| Sbjct: 73 atggtgcagcgcctcacgtaccggaagcgtcacagctacgctacgaagtccaaccagacc 132 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 || ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 133 cgagtcgtcaagaccccaggcgggaagcttgtgtaccagtacaccaagaagagggcgagc 192 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || ||||||||||| || ||||||||||| |||||||| || || ||| | |||||| || Sbjct: 193 gggcccaagtgccccgtcaccgggaagaaaatccaggggatccctcacttgaggcctgct 252 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || |||||||| || ||| || |||||| ||||||||||||||||||||| ||||||||| Sbjct: 253 gagtacaaaaggtccaggttgcctaggagccgcaggactgtgaaccgtccttatggtgga 312 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || |||||||||| ||| || ||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 313 gtactctctggaattgctgttagggagagaatcattcgtgccttcttggtcgaggagcag 372 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctcaaagtaa 403 |||||||| |||||||| |||||||||| || |||||||||||||| || |||||||| Sbjct: 373 aagattgtcaagaaggtcctgaaaatacaaaaaaccaaggacaagacagccgcaaagtaa 432
>gb|AY105537.1| Zea mays PCO097944 mRNA sequence Length = 694 Score = 339 bits (171), Expect = 6e-90 Identities = 303/347 (87%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || || ||||||||| | |||||||| || || |||||||||||||| Sbjct: 77 atggtgcagcgcctcacgtaccggaagcgtcacagctacgctacgaagtccaaccagacc 136 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 || ||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct: 137 cgagtcgtcaagaccccaggcgggaagcttgtgtaccagtacaccaagaagagggcgagc 196 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || ||||||||||| || ||||||||||| |||||||| || || ||| | |||||| || Sbjct: 197 gggcccaagtgccccgtcaccgggaagaaaatccaggggatccctcacttgaggcctgct 256 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || |||||||| || ||| || |||||| ||||||||||||||||||||| ||||||||| Sbjct: 257 gagtacaaaaggtccaggttgcctaggagccgcaggactgtgaaccgtccttatggtgga 316 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || |||||||||| ||| || ||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 317 gtactctctggaattgctgttagggagagaatcattcgtgccttcttggtcgaggagcag 376 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 390 |||||||| |||||||| |||||||||| || |||||||||||||| Sbjct: 377 aagattgtcaagaaggtcctgaaaatacaaaaaaccaaggacaagac 423
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 319 bits (161), Expect = 6e-84 Identities = 299/345 (86%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 76 atggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccagacc 135 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 || |||||||||||||| ||||| | ||| ||||||||||||||||||||| |||||||| Sbjct: 136 cgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcgagc 195 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || || ||||| || ||||||||||||||||| || ||||| ||||| || ||| || Sbjct: 196 gggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgct 255 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || ||||| || || || |||| ||||| |||||||| ||||||||||| || ||||| Sbjct: 256 gagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggtggt 315 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || || ||||| |||||||| || || ||||||||||| ||||| ||||| ||||||||| Sbjct: 316 gtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggagcag 375 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaag 388 ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 376 aagattgtgaagaaggtgttgaagatccagaagaccaaggacaag 420
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full insert sequence Length = 666 Score = 319 bits (161), Expect = 6e-84 Identities = 299/345 (86%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 76 atggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccagacc 135 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 || |||||||||||||| ||||| | ||| ||||||||||||||||||||| |||||||| Sbjct: 136 cgcgtcgtcaagacccccggtgggaggcttgtgtaccagtacaccaagaagcgggcgagc 195 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || || ||||| || ||||||||||||||||| || ||||| ||||| || ||| || Sbjct: 196 gggccgaaatgcccagtcaccgggaagaagatccaaggaattccacacctgagacctgct 255 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || ||||| || || || |||| ||||| |||||||| ||||||||||| || ||||| Sbjct: 256 gagtacaagaggtccagattgtcaaggaatcgcaggaccgtgaaccgtccttacggtggt 315 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || || ||||| |||||||| || || ||||||||||| ||||| ||||| ||||||||| Sbjct: 316 gtcctgtctggtactgcagtcagagagaggatcatccgggcttttttggtcgaggagcag 375 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaag 388 ||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 376 aagattgtgaagaaggtgttgaagatccagaagaccaaggacaag 420
>gb|AY105535.1| Zea mays PCO097943 mRNA sequence Length = 589 Score = 280 bits (141), Expect = 5e-72 Identities = 237/269 (88%) Strand = Plus / Plus Query: 122 ggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtg 181 ||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||| || Sbjct: 269 ggtgggaagcttgtgtaccaatacaccaagaagagggcgagcggtcccaagtgccccgtc 328 Query: 182 accgggaagaagatccagggtattccccacctcaggcctactgaatacaaaagatcaagg 241 |||||||||||||||||||| || |||||| | || ||| | || ||||| || || ||| Sbjct: 329 accgggaagaagatccaggggatcccccacttgagacctgccgagtacaagaggtccagg 388 Query: 242 ctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgca 301 |||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 389 ttgtctaggaaccgcaggactgttaaccgtccttatggtggagtactctctggaattgct 448 Query: 302 gtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 361 || ||||| || || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 449 gttagggagagaattatccgtgctttcttggttgaggagcagaatattgtcaagaaggtc 508 Query: 362 ttgaaaatacagaagaccaaggacaagac 390 ||||||||||||| |||||||||||||| Sbjct: 509 ctgaaaatacagaaaaccaaggacaagac 537 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || |||||||| ||| | |||||||| || || || ||||| ||||| Sbjct: 177 atggtgcagcgcctcacctaccgaaagcgtcacagctacgcgacaaaatccaatcagacc 236 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||| |||||||||||| Sbjct: 237 cgggtcgtgaagaccccaggt 257
>gb|AY846826.1| Triticum aestivum ribosomal protein l34 mRNA, complete cds Length = 404 Score = 252 bits (127), Expect = 1e-63 Identities = 292/347 (84%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||| ||||| ||| | |||||||| ||||||||||| || ||||| Sbjct: 43 atggtgcagcggctgacataccgaaagcgccacagctacgccaccaagtcgaatcagact 102 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 || |||||||||||||||||||| ||||| || |||||||||||||||||| ||||||| Sbjct: 103 cgcgtcgtcaagaccccaggtgggaagcttgtctaccagtacaccaagaagcgggcgagt 162 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || || ||||| || ||||| ||||||||||| || || || ||||| ||||||||| Sbjct: 163 gggccaaaatgcccggttaccggcaagaagatccaaggaatcccacacctgaggcctact 222 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtgga 283 || ||||| || | || |||| |||||| | ||||||||||||||||| |||||||| Sbjct: 223 gagtacaagaggcccagattgtcgaggaacaggaggactgtgaaccgtccttatggtggt 282 Query: 284 gtgctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcag 343 || || ||||| ||||||| ||||| |||||||| | || || ||||| ||||||||| Sbjct: 283 gttctgtctggtcctgcagtcagggagaggatcattagggcgtttttggtggaggagcag 342 Query: 344 aagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagac 390 |||||||||||||||||| | || || |||||||||||||| ||||| Sbjct: 343 aagattgtgaagaaggtgcttaagatccagaagaccaaggagaagac 389
>dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D12, full insert sequence Length = 562 Score = 238 bits (120), Expect = 2e-59 Identities = 150/160 (93%) Strand = Plus / Plus Query: 243 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 302 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 tgtctaggaaccgcagaactgtgaaccgtccctatggtggagtgctctctggaactgcag 224 Query: 303 tgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgt 362 | |||||||||||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct: 225 ttagggaaaggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtct 284 Query: 363 tgaaaatacagaagaccaaggacaagacgacctcaaagta 402 ||||||||||||| |||||||||||| | |||||||||| Sbjct: 285 tgaaaatacagaaaaccaaggacaagtcagcctcaaagta 324 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||||| Sbjct: 84 atggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcagacg 143 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||||||||| |||||| Sbjct: 144 cgggtcgtcaagactccaggt 164 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 443 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 502 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 361 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 420 Query: 503 atgttttag 511 ||||||||| Sbjct: 421 atgttttag 429
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 203 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 262 |||||||| ||||||||| |||| ||||| ||||| ||| |||||||||||||||| ||| Sbjct: 14637057 attccccatctcaggcctgctgagtacaagagatccaggttgtctaggaaccgcagaact 14636998 Query: 263 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 313 ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14636997 gtgaaccgtccctatggtggagtgctctctggaactgcagttagggaaagg 14636947 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 120 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 179 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 14638189 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccg 14638130 Query: 180 tgaccgggaagaagatccaggg 201 |||||||||||||||||||||| Sbjct: 14638129 tgaccgggaagaagatccaggg 14638108 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 |||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 14636865 aggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtcttgaaaata 14636806 Query: 371 cagaagaccaaggacaagacgacctcaaagta 402 ||||| |||||||||||| | |||||||||| Sbjct: 14636805 cagaaaaccaaggacaagtcagcctcaaagta 14636774 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||||| Sbjct: 14638380 atggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcagacg 14638321 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||||||||| |||||| Sbjct: 14638320 cgggtcgtcaagactccaggt 14638300 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 443 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 502 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 14636737 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 14636678 Query: 503 atgttttag 511 ||||||||| Sbjct: 14636677 atgttttag 14636669
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 157 bits (79), Expect = 5e-35 Identities = 103/111 (92%) Strand = Plus / Minus Query: 203 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 262 |||||||| ||||||||| |||| ||||| ||||| ||| |||||||||||||||| ||| Sbjct: 58724 attccccatctcaggcctgctgagtacaagagatccaggttgtctaggaaccgcagaact 58665 Query: 263 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 313 ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 58664 gtgaaccgtccctatggtggagtgctctctggaactgcagttagggaaagg 58614 Score = 147 bits (74), Expect = 5e-32 Identities = 80/82 (97%) Strand = Plus / Minus Query: 120 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 179 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 59856 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcgggcccaagtgccccg 59797 Query: 180 tgaccgggaagaagatccaggg 201 |||||||||||||||||||||| Sbjct: 59796 tgaccgggaagaagatccaggg 59775 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 |||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||||| Sbjct: 58532 aggatcattcgtgctttcttggttgaagagcagaagattgtgaagaaagtcttgaaaata 58473 Query: 371 cagaagaccaaggacaagacgacctcaaagta 402 ||||| |||||||||||| | |||||||||| Sbjct: 58472 cagaaaaccaaggacaagtcagcctcaaagta 58441 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||| ||||| || ||||||||||||||||| ||||| || |||||| Sbjct: 60047 atggtgcagcgcctgacgtaccgcaaaaggcacagctatgccacgaagtctaatcagacg 59988 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||||||||| |||||| Sbjct: 59987 cgggtcgtcaagactccaggt 59967 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 443 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 502 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 58404 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 58345 Query: 503 atgttttag 511 ||||||||| Sbjct: 58344 atgttttag 58336
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 203 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 262 ||||||||| | |||||| |||| ||||| || || ||| |||||||||||||||||||| Sbjct: 21214564 attccccacttgaggcctgctgagtacaagaggtccaggttgtctaggaaccgcaggact 21214505 Query: 263 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 313 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 21214504 gtgaaccgtccatatggtggagtgctctctggaactgcagttagggaaagg 21214454 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21214371 aggatcatccgtgctttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaata 21214312 Query: 371 cagaagaccaaggacaagac 390 ||||| |||||||||||||| Sbjct: 21214311 cagaaaaccaaggacaagac 21214292 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 3289222 aggatcatccgggcttttttggtcgaggagcagaagattgtgaagaaggtgttgaagatc 3289281 Query: 371 cagaagaccaaggacaag 388 |||||||||||||||||| Sbjct: 3289282 cagaagaccaaggacaag 3289299 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 120 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 179 ||||||| | ||| |||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 21215560 caggtgggaggcttgtgtaccagtacacgaagaagagggcgagcgggccgaagtgccccg 21215501 Query: 180 tgaccgggaagaagatccaggg 201 | |||||||||||||||||||| Sbjct: 21215500 tcaccgggaagaagatccaggg 21215479 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 3286861 atggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccagacc 3286920 Query: 104 cgggtcgtcaagaccccaggtg 125 || |||||||||||||| |||| Sbjct: 3286921 cgcgtcgtcaagacccccggtg 3286942 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 121 aggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgt 180 |||||| | ||| ||||||||||||||||||||| |||||||||| || || ||||| || Sbjct: 3287218 aggtgggaggcttgtgtaccagtacaccaagaagcgggcgagcgggccgaaatgcccagt 3287277 Query: 181 gaccgggaagaagatcca 198 ||||||||||||||||| Sbjct: 3287278 caccgggaagaagatcca 3287295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 21215737 atggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccagacc 21215678 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||||||||||||||| Sbjct: 21215677 agggtcgtcaagaccccaggt 21215657 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 243 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 302 |||| ||||| |||||||| ||||||||||| || ||||| || || ||||| ||||||| Sbjct: 3289081 tgtcaaggaatcgcaggaccgtgaaccgtccttacggtggtgtcctgtctggtactgcag 3289140 Query: 303 t 303 | Sbjct: 3289141 t 3289141 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 cagagattgtgaaacatttgat 564 |||||||||||||||||||||| Sbjct: 18477014 cagagattgtgaaacatttgat 18477035
>dbj|AP005159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016C11 Length = 170723 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Minus Query: 203 attccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggact 262 ||||||||| | |||||| |||| ||||| || || ||| |||||||||||||||||||| Sbjct: 40841 attccccacttgaggcctgctgagtacaagaggtccaggttgtctaggaaccgcaggact 40782 Query: 263 gtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaagg 313 ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 40781 gtgaaccgtccatatggtggagtgctctctggaactgcagttagggaaagg 40731 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 40648 aggatcatccgtgctttcttggtcgaggagcagaagattgtcaagaaggtcctgaaaata 40589 Query: 371 cagaagaccaaggacaagac 390 ||||| |||||||||||||| Sbjct: 40588 cagaaaaccaaggacaagac 40569 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 120 caggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctg 179 ||||||| | ||| |||||||||||||| ||||||||||||||||| || |||||||| | Sbjct: 41837 caggtgggaggcttgtgtaccagtacacgaagaagagggcgagcgggccgaagtgccccg 41778 Query: 180 tgaccgggaagaagatccaggg 201 | |||||||||||||||||||| Sbjct: 41777 tcaccgggaagaagatccaggg 41756 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| || |||||||||||| | |||||||| || || ||||| |||||||| Sbjct: 42014 atggtgcagcggctcacctaccggaagcgtcacagctacgcgactaagtcgaaccagacc 41955 Query: 104 cgggtcgtcaagaccccaggt 124 |||||||||||||||||||| Sbjct: 41954 agggtcgtcaagaccccaggt 41934
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || Sbjct: 66789 aggatcatccgggcttttttggtcgaggagcagaagattgtgaagaaggtgttgaagatc 66848 Query: 371 cagaagaccaaggacaag 388 |||||||||||||||||| Sbjct: 66849 cagaagaccaaggacaag 66866 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 ||||||||||| ||||||||||||||| |||||||||| ||||| || ||||||||||| Sbjct: 64428 atggtgcagcggctgacctaccggaagcggcacagctacgccacgaaatccaaccagacc 64487 Query: 104 cgggtcgtcaagaccccaggtg 125 || |||||||||||||| |||| Sbjct: 64488 cgcgtcgtcaagacccccggtg 64509 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 121 aggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgt 180 |||||| | ||| ||||||||||||||||||||| |||||||||| || || ||||| || Sbjct: 64785 aggtgggaggcttgtgtaccagtacaccaagaagcgggcgagcgggccgaaatgcccagt 64844 Query: 181 gaccgggaagaagatcca 198 ||||||||||||||||| Sbjct: 64845 caccgggaagaagatcca 64862 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 243 tgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcag 302 |||| ||||| |||||||| ||||||||||| || ||||| || || ||||| ||||||| Sbjct: 66648 tgtcaaggaatcgcaggaccgtgaaccgtccttacggtggtgtcctgtctggtactgcag 66707 Query: 303 t 303 | Sbjct: 66708 t 66708
>gb|DQ407752.1| Gymnadenia conopsea ribosomal protein mRNA, complete cds Length = 773 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 |||||||||||||| || ||| | ||| |||| ||||||||||| ||||| |||||||| Sbjct: 79 atggtgcagcgtctcacatacagaaagcggcatagctatgccacgaagtctaaccagact 138 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 |||| || || ||||| || || | ||| |||||||||||||| || ||||||||||| Sbjct: 139 agggttgtgaaaaccccgggcgggaggcttgtgtaccagtacacgaataagagggcgagt 198 Query: 164 ggccccaagtgccctgtgaccgggaa 189 || || || ||||||||||||||||| Sbjct: 199 gggccgaaatgccctgtgaccgggaa 224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 305 agggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttg 364 ||||||||||| ||||| || || |||| |||||||| |||||||| |||||||| || Sbjct: 340 agggaaaggattatccgggcctttctggtggaggagcaaaagattgttaagaaggttctg 399 Query: 365 aaaatacagaagaccaaggacaag 388 || || |||||| |||| |||||| Sbjct: 400 aagatccagaaggccaaagacaag 423
>gb|L27107.1|TOB6RPLA Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA, complete cds Length = 597 Score = 97.6 bits (49), Expect = 4e-17 Identities = 247/313 (78%) Strand = Plus / Plus Query: 72 ggcacagctatgccaccaagtccaaccagacgcgggtcgtcaagaccccaggtggcaagc 131 ||||||||||||||||||| || ||||| |||| ||||| ||||||||||| |||| Sbjct: 61 ggcacagctatgccaccaaatctaaccaacatagggttgtcaaaaccccaggtggaaagc 120 Query: 132 tcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaaga 191 | | |||||| |||||||||||||| || || || ||||||||||| || || || | Sbjct: 121 tgatttaccagagtaccaagaagagggctagtggacctaagtgccctgttactggaaaaa 180 Query: 192 agatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagga 251 || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || | Sbjct: 181 gaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtcgagaa 240 Query: 252 accgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaa 311 || | ||||||||||||||| | |||||||| ||| | || || | ||| || | |||| Sbjct: 241 acaggaggactgtgaaccgtgcttatggtggtgtgttgtcaggcagtgctgtacgtgaaa 300 Query: 312 ggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaatac 371 ||||||| | || || ||||| || || || ||||||||||||||||| ||||| || | Sbjct: 301 ggatcataagagcctttttggtggaagaacaaaagattgtgaagaaggttttgaagatcc 360 Query: 372 agaagaccaagga 384 |||| ||||||| Sbjct: 361 agaaagccaagga 373
>gb|DQ160155.1| Taraxacum officinale TO121-23 (To121-23) mRNA, partial cds Length = 243 Score = 89.7 bits (45), Expect = 1e-14 Identities = 177/221 (80%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccaccaagtccaaccagacg 103 |||||||||||||| || |||||||| | || |||||||| ||||| |||||||| Sbjct: 21 atggtgcagcgtctcacttaccggaaacgccatagctatgctaccaaatccaaccaacat 80 Query: 104 cgggtcgtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagc 163 | |||||||| ||||| ||||| ||||| || |||||| ||| |||||||| || || Sbjct: 81 agagtcgtcaaaacccctggtggaaagctggtctaccagaccactaagaagagagctagt 140 Query: 164 ggccccaagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctact 223 || || || |||||||| ||||| |||| || ||||| ||||| ||| | ||||| ||| Sbjct: 141 ggacctaaatgccctgttaccggcaagagaattcaggggattcctcacttgaggccaact 200 Query: 224 gaatacaaaagatcaaggctgtctaggaaccgcaggactgt 264 ||||||||||| |||||| | || |||||| | |||||||| Sbjct: 201 gaatacaaaaggtcaaggttatcaaggaacagaaggactgt 241
>gb|AY174764.1| Orobanche cumana 60S ribosomal protein L34 mRNA, partial cds Length = 548 Score = 85.7 bits (43), Expect = 2e-13 Identities = 211/267 (79%) Strand = Plus / Plus Query: 110 gtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggcccc 169 ||||| ||||| || || ||||| ||||||| | ||| ||||||||||| ||||| ||| Sbjct: 13 gtcaaaacccctggggggaagctggtgtaccggagcactaagaagagggctagcggaccc 72 Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 || || || || ||||| |||| ||||| || ||||| || | |||||| |||| ||| Sbjct: 73 aaatgtcccgtaaccggcaagagaatccaagggattcctcatttgaggcctgctgagtac 132 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 || ||||| | || | || |||||||||||||| | |||||| |||||||| || | Sbjct: 133 aagagatctcgattgcccagaaaccgcaggactgtaacccgtccttatggtggtgtatta 192 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 ||||||| ||| |||||||| ||||| || || ||||| || || || ||||| || ||| Sbjct: 193 tctggaattgctgtgagggagaggattattcgggcttttttagtggaagagcaaaaaatt 252 Query: 350 gtgaagaaggtgttgaaaatacagaag 376 ||||||||||| ||||| || |||||| Sbjct: 253 gtgaagaaggtattgaagattcagaag 279
>emb|AJ718263.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT4-24-380, cultivar Bright Yellow 2 Length = 271 Score = 85.7 bits (43), Expect = 2e-13 Identities = 169/211 (80%) Strand = Plus / Minus Query: 72 ggcacagctatgccaccaagtccaaccagacgcgggtcgtcaagaccccaggtggcaagc 131 ||||||||||||||||||| || ||||| |||| ||||| ||||||||||| |||| Sbjct: 259 ggcacagctatgccaccaaatctaaccaacatagggttgtcaaaaccccaggtggaaagc 200 Query: 132 tcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaaga 191 | | |||||| |||||||||||||| || || || ||||||||||| || || || | Sbjct: 199 tgatttaccagagtaccaagaagagggctagtggacctaagtgccctgttactggaaaaa 140 Query: 192 agatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagga 251 || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || | Sbjct: 139 gaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtcgagaa 80 Query: 252 accgcaggactgtgaaccgtccctatggtgg 282 || | ||||||||||||||| | |||||||| Sbjct: 79 acaggaggactgtgaaccgtgcttatggtgg 49
>dbj|AK059401.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B04, full insert sequence Length = 303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 443 taaacaaggaaaatatttttgttggtggttatgatcaatggtttagtcccttctagctaa 502 ||||||||||||| |||||||||| |||| |||||||||||| ||| | ||||||||| | Sbjct: 102 taaacaaggaaaacatttttgttgatggtgatgatcaatggtctagcctcttctagctga 161 Query: 503 atgttttag 511 ||||||||| Sbjct: 162 atgttttag 170 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 338 gagcagaagattgtgaagaaggtgttgaaaatacagaagaccaaggacaagacgacctca 397 |||||||||||||||||||| || |||||||||||||| |||||||||||| | ||||| Sbjct: 1 gagcagaagattgtgaagaaagtcttgaaaatacagaaaaccaaggacaagtcagcctca 60 Query: 398 aagta 402 ||||| Sbjct: 61 aagta 65
>gb|L27089.1|TOB6RPL Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34 mRNA, complete cds Length = 630 Score = 81.8 bits (41), Expect = 2e-12 Identities = 245/313 (78%) Strand = Plus / Plus Query: 72 ggcacagctatgccaccaagtccaaccagacgcgggtcgtcaagaccccaggtggcaagc 131 ||||||||||||||||||| || ||||| |||| ||||| ||||||||||| |||| Sbjct: 47 ggcacagctatgccaccaaatctaaccaacatagggttgtcaaaaccccaggtggaaagc 106 Query: 132 tcgtgtaccagtacaccaagaagagggcgagcggccccaagtgccctgtgaccgggaaga 191 | | || ||| || ||||||||||| || || || ||||||||||| || || || | Sbjct: 107 tgatttatcagagtactaagaagagggctagtggacctaagtgccctgttactggaaaaa 166 Query: 192 agatccagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctagga 251 || || || ||||| ||| | ||||||||||||||||| || ||||| |||| || | Sbjct: 167 gaattcaagggattcctcacttgaggcctactgaatacaagaggtcaagattgtccagaa 226 Query: 252 accgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaa 311 || | ||||||||||||||| | |||||||| ||| | || || | ||| || | |||| Sbjct: 227 acaggaggactgtgaaccgtgcttatggtggcgtgttgtcaggcagtgccgtacgtgaaa 286 Query: 312 ggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaatac 371 ||||||| | || || ||||| || || || ||||||||||||||||| ||||| || | Sbjct: 287 ggatcataagagcctttttggtggaagaacaaaagattgtgaagaaggttttgaagatcc 346 Query: 372 agaagaccaagga 384 |||| ||||||| Sbjct: 347 agaaagccaagga 359
>gb|AY389653.1| Hyacinthus orientalis ribosomal protein L34 (RPL34) mRNA, complete cds Length = 608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 189/238 (79%), Gaps = 1/238 (0%) Strand = Plus / Plus Query: 147 ccaagaagagggcgagcggccccaagtgccctgtgaccgggaagaagatccagggtattc 206 ||||||||||||||| || || | ||||||||| || || |||| || || || |||| Sbjct: 132 ccaagaagagggcgaaagggccaaggtgccctgtcactggaaagagaattcaagggattc 191 Query: 207 cccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggactgtga 266 | || || || |||||||| ||||| || || ||| || | |||||| | ||||| |||| Sbjct: 192 ctcatcttagacctactgagtacaagaggtctaggttggcaaggaacaggaggacagtga 251 Query: 267 accgtccctatggtggagtgctctctggaactgcagtgagggaaaggatcatccgtgctt 326 | ||| | ||||||||||| |||||||| | || |||| ||| || |||||||| || | Sbjct: 252 atcgtgcatatggtggagttctctctggcagcgcggtgaaggagagaatcatccgggcct 311 Query: 327 tcttggttgaggagcagaagattgtgaagaaggtgttgaaaatacagaagaccaagga 384 |||||| || |||||||||||||||||||| || |||| || |||||| ||||||| Sbjct: 312 -cttggtagaagagcagaagattgtgaagaaagttctgaagattcagaaggccaagga 368
>ref|NM_113811.3| Arabidopsis thaliana structural constituent of ribosome AT3G28900 mRNA, complete cds Length = 574 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 161 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 220 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 221 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 280 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 281 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 340 Query: 350 gtgaagaaggtgttgaa 366 ||||||||||| ||||| Sbjct: 341 gtgaagaaggttttgaa 357
>gb|BT013115.1| Lycopersicon esculentum clone 114402R, mRNA sequence Length = 663 Score = 73.8 bits (37), Expect = 6e-10 Identities = 211/269 (78%) Strand = Plus / Plus Query: 116 accccaggtggcaagctcgtgtaccagtacaccaagaagagggcgagcggccccaagtgc 175 ||||||||||| ||||| | |||||| || ||||||||||| | || || |||||| Sbjct: 109 accccaggtggaaagctgatttaccagactacgaagaagagggctaatggacctaagtgc 168 Query: 176 cctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatacaaaaga 235 ||||| || || |||| || || || ||||| ||| | || ||| |||| ||||| ||| Sbjct: 169 cctgtaactggaaagagaattcaagggattccacacttgagacctgctgagtacaagaga 228 Query: 236 tcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctctctgga 295 || ||| | ||||||||| | ||||||||||||||| | |||||||| ||| | || || Sbjct: 229 tccaggttatctaggaacaggaggactgtgaaccgtgcttatggtggtgtgttgtccggc 288 Query: 296 actgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaag 355 | ||| || | |||||||||||| | || || |||||||| || || ||||| |||||| Sbjct: 289 agtgctgtacgtgaaaggatcatcagagcctttttggttgaagaacaaaagatcgtgaag 348 Query: 356 aaggtgttgaaaatacagaagaccaagga 384 ||||| ||||| || ||||| ||||||| Sbjct: 349 aaggttttgaagatccagaaagccaagga 377
>gb|AY091359.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 394 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 127 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 186 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 187 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 246 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 247 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 306 Query: 350 gtgaagaaggtgttgaa 366 ||||||||||| ||||| Sbjct: 307 gtgaagaaggttttgaa 323
>gb|AY045818.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At3g28900) mRNA, complete cds Length = 568 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 161 aagtgccctgttactggcaagagaatccaagggattccgcatttgagacctgctgagtac 220 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 221 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttcta 280 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 281 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 340 Query: 350 gtgaagaaggtgttgaa 366 ||||||||||| ||||| Sbjct: 341 gtgaagaaggttttgaa 357
>emb|BX825773.1|CNS0A6BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 73.8 bits (37), Expect = 6e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 ||||||||||| || || |||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 134 aagtgccctgtaactggcaagagaatccaagggattccgcatttgagacctgctgagtac 193 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 ||||| |||||| || | |||||| ||||| ||||| ||| | |||||||| || || Sbjct: 194 aaaaggtcaaggttggcaaggaacgagaggacagtgaatcgtgcatatggtggtgttctt 253 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 254 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 313 Query: 350 gtgaagaaggtgttgaa 366 ||||||||||| ||||| Sbjct: 314 gtgaagaaggttttgaa 330
>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE Length = 123473 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 215 aggcctactgaatacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccc 274 |||||||| || ||||| |||||||||||| |||| ||||| ||||||||||||||| | Sbjct: 76357 aggcctacagagtacaagagatcaaggctgcctagaaaccgtaggactgtgaaccgtgct 76416 Query: 275 tatggtggagt 285 ||||| ||||| Sbjct: 76417 tatggcggagt 76427 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 323 gctttcttggttgaggagcagaagattgtgaagaaggt 360 |||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 76563 gctttcttggttgaagagcaaaagatcgtgaaaaaggt 76600
>ref|NM_105630.2| Arabidopsis thaliana RPL34 (RIBOSOMAL PROTEIN L34); structural constituent of ribosome AT1G69620 (RPL34) mRNA, complete cds Length = 664 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>gb|AF349526.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 410 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 154 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 213 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 214 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 273 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 274 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 323
>gb|AF327531.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g69620) mRNA, complete cds Length = 598 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 215 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 274 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 275 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 334 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 335 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 384
>gb|AF446885.1|AF446885 Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 360 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 154 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 213 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 214 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 273 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 274 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 323
>gb|AY052720.1| Arabidopsis thaliana F24J1.23/F24J1.23 mRNA, complete cds Length = 539 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>emb|BX816733.1|CNS0ABV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 67.9 bits (34), Expect = 4e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 886 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 945 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 946 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 995
>emb|BX814797.1|CNS0AC1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 202 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 261 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 262 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 321 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 322 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 371
>emb|BX818608.1|CNS0AAXR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 577 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 168 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 227 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 228 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 287 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 288 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 337
>gb|AF324703.1|AF324703 Arabidopsis thaliana T6C23.18 mRNA, complete cds Length = 599 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>gb|AY085544.1| Arabidopsis thaliana clone 1568 mRNA, complete sequence Length = 582 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Plus Query: 197 cagggtattccccacctcaggcctactgaatacaaaagatcaaggctgtctaggaaccgc 256 ||||||||||| ||| | ||||| ||||| ||||| || ||| | | || || ||| | Sbjct: 216 cagggtattcctcacttgaggccaactgagtacaagaggtcacgtttatcaagaaacagg 275 Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 ||||| ||||||||| | |||||||| || | ||||| |||| || |||||||| ||| Sbjct: 276 aggaccgtgaaccgtgcttatggtggggttttgtctggttctgctgttagggaaagaatc 335 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 || ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 336 attcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 385
>emb|BX814692.1|CNS0ADOU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 257 aggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgagggaaaggatc 316 |||||||||||||| | || |||||||| | ||||| |||||||||||||||||||| Sbjct: 225 aggactgtgaaccgagcatacggtggagtcttgtctggttctgcagtgagggaaaggatc 284 Query: 317 atccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttga 365 || || || ||| | || || ||||| |||||||| ||||| ||||||| Sbjct: 285 attcgggcattccttgtcgaagagcaaaagattgtaaagaaagtgttga 333
>emb|BX825772.1|CNS0A6BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 544 Score = 65.9 bits (33), Expect = 1e-07 Identities = 156/197 (79%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaagaagatccagggtattccccacctcaggcctactgaatac 229 ||||||||||| || || ||||| ||||| || ||||| || | || ||| |||| ||| Sbjct: 134 aagtgccctgttactggcaagaaaatccaagggattccgcatttgagtcctgctgagtac 193 Query: 230 aaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtgctc 289 ||||| |||||| || | |||||| ||||| || || ||| | |||||||| || || Sbjct: 194 aaaaggtcaaggttggcaaggaacgagaggacagtaaatcgtgcatatggtggtgttcta 253 Query: 290 tctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagatt 349 |||||| ||| || ||||| |||||| || | || ||||||||||| || ||||||||| Sbjct: 254 tctggagttgctgttagggagaggatcgtcagggccttcttggttgaagaacagaagatt 313 Query: 350 gtgaagaaggtgttgaa 366 || |||||||| ||||| Sbjct: 314 gtaaagaaggttttgaa 330
>ref|XM_359481.1| Magnaporthe grisea 70-15 hypothetical protein (MG05296.4) partial mRNA Length = 351 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 361 |||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 272 tccgtgctttcttgatcgaggagcagaagattgtcaagaaggtg 315
>gb|AY849626.1| Magnaporthe grisea 60S ribosomal protein L34-B-like protein mRNA, complete cds Length = 683 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 361 |||||||||||||| | ||||||||||||||||| ||||||||| Sbjct: 332 tccgtgctttcttgatcgaggagcagaagattgtcaagaaggtg 375
>ref|NM_102452.3| Arabidopsis thaliana structural constituent of ribosome AT1G26880 mRNA, complete cds Length = 668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 297 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 356 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 302 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 361 Query: 357 aggtgttgaaa 367 | ||||||||| Sbjct: 362 aagtgttgaaa 372
>gb|AY117327.1| Arabidopsis thaliana putative 60S ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 297 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 356 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 254 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 313 Query: 357 aggtgttgaaa 367 | ||||||||| Sbjct: 314 aagtgttgaaa 324
>gb|AY080712.1| Arabidopsis thaliana putative 60s ribosomal protein L34 (At1g26880) mRNA, complete cds Length = 653 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 297 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 356 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 275 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 334 Query: 357 aggtgttgaaa 367 | ||||||||| Sbjct: 335 aagtgttgaaa 345
>emb|BX814361.1|CNS0AEHP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 297 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 356 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 262 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 321 Query: 357 aggtgttgaaa 367 | ||||||||| Sbjct: 322 aagtgttgaaa 332
>gb|AY088495.1| Arabidopsis thaliana clone 7182 mRNA, complete sequence Length = 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 297 ctgcagtgagggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaaga 356 ||||||| |||||||||||||| || || ||| | || || ||||| ||||||||||||| Sbjct: 303 ctgcagtcagggaaaggatcattcgggcattccttgtcgaagagcaaaagattgtgaaga 362 Query: 357 aggtgttgaaa 367 | ||||||||| Sbjct: 363 aagtgttgaaa 373
>gb|DQ066310.1| Ixodes scapularis isolate IS-6-12L-37 ribosomal protein L34 mRNA, complete cds Length = 360 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtg 352 ||||||||||| |||||| || |||||||||||||||||||| Sbjct: 262 aggatcatccgggctttcctgattgaggagcagaagattgtg 303
>gb|U10047.1|PSU10047 Pisum sativum ribosomal protein L34 homolog (RPL34) mRNA, complete cds Length = 494 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 305 agggaaaggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttg 364 ||||||||||| || ||||||||| | ||||| ||||| || ||||| ||||| || ||| Sbjct: 282 agggaaaggattattcgtgctttccttgttgaagagcaaaaaattgttaagaaagttttg 341 Query: 365 aaaatacagaagac 378 || ||||||||||| Sbjct: 342 aagatacagaagac 355 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 149 aagaagagggcgagcggccccaagtgccctgtgaccgggaagaagatccagggtattccc 208 |||||||||||||| || || ||||| ||||| || || |||| |||||| || ||||| Sbjct: 126 aagaagagggcgagtggacctaagtgtcctgttactggaaagaggatccaagggattcca 185 Query: 209 cacctcaggcctactgaatacaa 231 || | || |||||||||||||| Sbjct: 186 catttgagacctactgaatacaa 208
>dbj|AP000386.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MLD15 Length = 82430 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 326 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||| || |||||||||||||||||||| ||||| Sbjct: 49230 ttcttggttgaagaacagaagattgtgaagaaggttttgaa 49190
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 326 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 |||||||| || ||||||||||||||||||||||| ||||| Sbjct: 36818 ttcttggtggaagagcagaagattgtgaagaaggttttgaa 36858
>gb|AY023446.1| Oryza sativa microsatellite MRG5771 containing (TCC)X8, genomic sequence Length = 224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 44 atggtgcagcgtctgacctaccggaagaggcacagctatgccac 87 ||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct: 180 atggtgcagcgcctgacgtaccgcaaaaggcacagctatgccac 223
>gb|AF378548.1|AF378548 Ophiostoma novo-ulmi clone 10 ribosomal protein L34-like protein mRNA, complete cds Length = 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggt 360 |||||||||||||||||||||||||||| Sbjct: 289 ttgaggagcagaagattgtgaagaaggt 316
>gb|AC166313.2| Medicago truncatula chromosome 7 BAC clone mte1-4j13, complete sequence Length = 123373 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 70 gaggcacagctatgccaccaagtccaaccag 100 ||||||||||||||||||||| ||||||||| Sbjct: 26508 gaggcacagctatgccaccaaatccaaccag 26478
>gb|AC122544.1| Genomic sequence for Lycopersicon esculentum, clone L136C6, complete sequence Length = 121637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 251 aaccgcaggactgtgaaccgtccctatggtggagtgctctctggaactgcagtgaggga 309 ||||||||||||||||||||| | ||||| || ||||| ||||||| ||| || ||||| Sbjct: 64232 aaccgcaggactgtgaaccgtgcttatggaggtgtgctatctggaagtgctgtaaggga 64174
>gb|AC148762.2| Medicago truncatula chromosome 7 BAC clone mth2-15p5, complete sequence Length = 136116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 70 gaggcacagctatgccaccaagtccaaccag 100 ||||||||||||||||||||| ||||||||| Sbjct: 84427 gaggcacagctatgccaccaaatccaaccag 84457
>gb|AC149288.1| Solanum demissum chromosome 5 clone PGEC446J10 map MAP_LOC, complete sequence Length = 102692 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||| | || || |||||||| || || ||||||||||||||||| ||||| || Sbjct: 95616 aggatcatcagagcctttttggttgaagaacaaaagattgtgaagaaggttttgaagatc 95557 Query: 371 cagaagaccaagga 384 ||||| ||||||| Sbjct: 95556 cagaaagccaagga 95543 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 257 aggactgtgaaccgtccctatggtgg 282 ||||||||||||||| |||||||||| Sbjct: 95758 aggactgtgaaccgtgcctatggtgg 95733
>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence Length = 81567 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||| | || || |||||||| || || ||||||||||||||||| ||||| || Sbjct: 48000 aggatcatcagagcctttttggttgaagaacaaaagattgtgaagaaggttttgaagatc 47941 Query: 371 cagaagaccaagga 384 ||||| ||||||| Sbjct: 47940 cagaaagccaagga 47927 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 257 aggactgtgaaccgtccctatggtgg 282 ||||||||||||||| |||||||||| Sbjct: 48142 aggactgtgaaccgtgcctatggtgg 48117
>ref|XM_384325.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04149.1) partial mRNA Length = 333 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 |||||||||||||||| || |||||||||||||| Sbjct: 269 ttgaggagcagaagatcgtcaagaaggtgttgaa 302
>gb|AC013289.11|AC013289 Arabidopsis thaliana chromosome 1 BAC T6C23 genomic sequence, complete sequence Length = 87148 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 314 atcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||| ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 79910 atcattcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 79858
>gb|AC021046.2|AC021046 Arabidopsis thaliana chromosome 1 BAC F24J1 genomic sequence, complete sequence Length = 44430 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 314 atcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||| ||||| ||| | || |||||||| ||||||||||||||||| ||||| Sbjct: 9844 atcattcgtgccttccttgtggaggagcaaaagattgtgaagaaggttttgaa 9792
>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence Length = 120384 Score = 48.1 bits (24), Expect = 0.033 Identities = 93/116 (80%) Strand = Plus / Plus Query: 227 tacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtg 286 ||||| ||||||||| | |||| |||||||| || |||||| || | ||||||||| | Sbjct: 90830 tacaagagatcaaggttacctagaaaccgcagcacagtgaactgtgcgtatggtggaatt 90889 Query: 287 ctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagca 342 | |||||| ||| || ||||||| |||||| | |||||||||||||| ||||| Sbjct: 90890 ttgtctggaggtgctgttagggaaatgatcattagggctttcttggttgaagagca 90945
>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence Length = 130592 Score = 48.1 bits (24), Expect = 0.033 Identities = 93/116 (80%) Strand = Plus / Plus Query: 227 tacaaaagatcaaggctgtctaggaaccgcaggactgtgaaccgtccctatggtggagtg 286 ||||| ||||||||| | |||| |||||||| || |||||| || | ||||||||| | Sbjct: 40283 tacaagagatcaaggttacctagaaaccgcagcacagtgaactgtgcgtatggtggaatt 40342 Query: 287 ctctctggaactgcagtgagggaaaggatcatccgtgctttcttggttgaggagca 342 | |||||| ||| || ||||||| |||||| | |||||||||||||| ||||| Sbjct: 40343 ttgtctggaggtgctgttagggaaatgatcattagggctttcttggttgaagagca 40398
>gb|AY961475.1| Phytophthora infestans clone MY-23-A-10 ribosomal protein L34 mRNA, complete cds Length = 515 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggtg 361 |||| |||||| || |||||||||||||||| || ||||||||| Sbjct: 311 tccgcgctttcctgattgaggagcagaagatcgttaagaaggtg 354 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 110 gtcaagaccccaggtggcaagctcgtgtaccagtacaccaagaag 154 ||||||||||| ||||||||||| || |||||||| ||||||| Sbjct: 109 gtcaagacccctggtggcaagcttgtcgcccagtacatcaagaag 153
>ref|XM_958025.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||||| | |||||||||||||||| || |||||||| Sbjct: 272 tccgtgctttcctcattgaggagcagaagatcgtcaagaaggt 314
>ref|XM_328562.1| Neurospora crassa OR74A hypothetical protein ( (AF378548) ribosomal protein L34-like protein [Ophiostoma novo-ulmi] ) (NCU07857.1) partial mRNA Length = 354 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||||| | |||||||||||||||| || |||||||| Sbjct: 272 tccgtgctttcctcattgaggagcagaagatcgtcaagaaggt 314
>ref|XM_744346.1| Aspergillus fumigatus Af293 ribosomal protein L34 protein (Afu2g03040) partial mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||||| || ||||||||||||| || || |||||||| Sbjct: 497 tccgtgctttcctgattgaggagcagaaaatcgtcaagaaggt 539
>dbj|AB226191.1| Aspergillus oryzae cDNA, contig sequence: AoEST3050 Length = 605 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||||| || | |||||||||||||| || |||||||| Sbjct: 346 tccgtgctttcctgatcgaggagcagaagatcgtcaagaaggt 388
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 318 tccgtgctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||||| || | |||||||||||||| || |||||||| Sbjct: 1807847 tccgtgctttcctgatcgaggagcagaagatcgtcaagaaggt 1807889
>gb|AY168761.1| Branchiostoma belcheri tsingtaunese ribosomal protein L34 mRNA, complete cds Length = 466 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 306 gggaaaggatcatccgtgctttcttggttgaggagcagaagattgtg 352 |||||||||| | ||||||||| || ||||||| |||||||||||| Sbjct: 290 gggaaaggattgttcgtgctttcctgattgaggaacagaagattgtg 336
>dbj|AK062367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H12, full insert sequence Length = 472 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 106 ggtcgtcaagaccccaggtggcaagct 132 ||||||||||||||| ||||||||||| Sbjct: 119 ggtcgtcaagacccctggtggcaagct 145 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtg 361 |||||||||||||||| || ||||||||| Sbjct: 340 ttgaggagcagaagatcgtcaagaaggtg 368
>ref|XM_482187.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 543 cagagattgtgaaacatttgat 564 |||||||||||||||||||||| Sbjct: 992 cagagattgtgaaacatttgat 971
>ref|NM_032975.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 2, mRNA Length = 6072 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 3965 ccccacctcaggcctactgaat 3986
>ref|NM_001390.3| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 1, mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 4059 ccccacctcaggcctactgaat 4080
>ref|NM_032980.2| Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 6, mRNA Length = 5221 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 3114 ccccacctcaggcctactgaat 3135
>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete sequence Length = 121915 Score = 44.1 bits (22), Expect = 0.52 Identities = 61/74 (82%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgtgaagaaggtgttgaaaata 370 ||||||||| | || || |||||||| || || || |||||||||||||| ||||| || Sbjct: 102683 aggatcatcagagcctttttggttgaagaacaaaaaattgtgaagaaggttttgaagatc 102742 Query: 371 cagaagaccaagga 384 ||||| ||||||| Sbjct: 102743 cagaaagccaagga 102756
>ref|XM_420489.1| PREDICTED: Gallus gallus similar to ribosomal protein L34; 60S ribosomal protein L34 (LOC422526), mRNA Length = 899 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||||||||||| |||||||||||| Sbjct: 793 ttgaggagcagaagattgttgtgaaggtgttgaa 826
>ref|XM_657034.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4522.2), mRNA Length = 351 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 320 cgtgctttcttggttgaggagcagaagattgtgaagaaggtg 361 ||||||||| || | |||||||||||||| || ||||||||| Sbjct: 274 cgtgctttcctgatcgaggagcagaagatcgtcaagaaggtg 315
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 293 ggaactgcagtgagggaaagga 314 |||||||||||||||||||||| Sbjct: 71833 ggaactgcagtgagggaaagga 71854
>ref|XM_792139.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9354-PA, isoform A (LOC592626), mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagat 348 |||||| | |||||||||||| | |||||||||||||| Sbjct: 298 aggatcgtgcgtgctttcttgatcgaggagcagaagat 335
>gb|AC068506.10| Homo sapiens chromosome 18, clone RP11-96A15, complete sequence Length = 175885 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 50549 ccccacctcaggcctactgaat 50528
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 323 gctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||| | |||||||||||||| || |||||||| Sbjct: 548802 gctttcttgatcgaggagcagaagatcgtcaagaaggt 548765
>gb|AC022166.7| Homo sapiens chromosome 16 clone RP11-525K10, complete sequence Length = 163998 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 gaaaatacagaagaccaaggac 385 |||||||||||||||||||||| Sbjct: 161288 gaaaatacagaagaccaaggac 161309
>emb|CR338843.2| Gallus gallus finished cDNA, clone ChEST69d4 Length = 1011 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||||||||||| |||||||||||| Sbjct: 905 ttgaggagcagaagattgttgtgaaggtgttgaa 938
>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence Length = 163976 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 gaaaatacagaagaccaaggac 385 |||||||||||||||||||||| Sbjct: 115974 gaaaatacagaagaccaaggac 115953
>emb|BX950575.1| Gallus gallus finished cDNA, clone ChEST566l24 Length = 665 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||||||||||| |||||||||||| Sbjct: 559 ttgaggagcagaagattgttgtgaaggtgttgaa 592
>emb|BX932642.1| Gallus gallus finished cDNA, clone ChEST494g15 Length = 903 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||||||||||| |||||||||||| Sbjct: 794 ttgaggagcagaagattgttgtgaaggtgttgaa 827
>emb|BX931507.1| Gallus gallus finished cDNA, clone ChEST391o10 Length = 866 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 ttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||||||||||| |||||||||||| Sbjct: 781 ttgaggagcagaagattgttgtgaaggtgttgaa 814
>gb|AC009277.4|AC009277 Homo sapiens chromosome 18, clone RP11-481E24, complete sequence Length = 160401 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 136638 ccccacctcaggcctactgaat 136617
>gb|AY909414.1| Siniperca chuatsi clone C46 60S ribosomal protein L34 mRNA, partial cds Length = 294 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagat 348 ||||||| ||||||||| || |||||||||||||||| Sbjct: 168 aggatcaagcgtgctttcctgattgaggagcagaagat 205
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 cagagattgtgaaacatttgat 564 |||||||||||||||||||||| Sbjct: 59037 cagagattgtgaaacatttgat 59058
>ref|NM_209371.1| Eremothecium gossypii ADL078Cp (ADL078C), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 323 gctttcttggttgaggagcagaagattgtgaagaaggt 360 ||||||||| | |||||||||||||| || |||||||| Sbjct: 274 gctttcttgatcgaggagcagaagatcgtcaagaaggt 311
>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete sequence Length = 85372 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 338 gagcagaagattgtgaagaaggtgttgaaa 367 ||||| |||||||||||||| ||||||||| Sbjct: 23621 gagcaaaagattgtgaagaaagtgttgaaa 23592
>dbj|AB209102.1| Homo sapiens mRNA for dystrobrevin alpha isoform 2 variant protein Length = 6015 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 3933 ccccacctcaggcctactgaat 3954
>emb|AL833285.1|HSM804598 Homo sapiens mRNA; cDNA DKFZp451O128 (from clone DKFZp451O128) Length = 6066 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 ccccacctcaggcctactgaat 227 |||||||||||||||||||||| Sbjct: 3959 ccccacctcaggcctactgaat 3980
>ref|XM_461331.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F24167g) partial mRNA Length = 369 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggtcgtcaagaccccaggtgg 126 ||||||||||||||||||||| Sbjct: 63 ggtcgtcaagaccccaggtgg 83
>emb|CR639118.2|CNS0ES44 Tetraodon nigroviridis full-length cDNA Length = 402 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgt 351 ||||||| ||| || ||| || ||||||||||||||||||| Sbjct: 279 aggatcaaccgcgcattcctgattgaggagcagaagattgt 319
>emb|AL136096.7| Human DNA sequence from clone RP1-23D17 on chromosome 6q15-16.2 Contains the SPACA1 gene for sperm acrosome associated 1, part of the CNR1 gene for cannabinoid receptor 1 (brain) and a CpG island, complete sequence Length = 112212 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 ggaactgcagtgagggaaagg 313 ||||||||||||||||||||| Sbjct: 68161 ggaactgcagtgagggaaagg 68141
>emb|AL031622.1|HS740A11 Human DNA sequence from clone RP4-740A11 on chromosome Xq22.2-23 Contains part of the COL4A5 gene for type IV alpha 5 collagen (Alport syndrome), complete sequence Length = 104674 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 442 gtaaacaaggaaaatattttt 462 ||||||||||||||||||||| Sbjct: 97472 gtaaacaaggaaaatattttt 97452
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 ggtcgtcaagaccccaggtgg 126 ||||||||||||||||||||| Sbjct: 1919207 ggtcgtcaagaccccaggtgg 1919187
>emb|BX825288.1|CNS0A6GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 326 ttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||||| || ||||||| ||| |||||||| ||||| Sbjct: 307 ttcttggttgaagaacagaagactgttaagaaggttttgaa 347
>gb|AC097506.3| Homo sapiens BAC clone RP11-366P6 from 2, complete sequence Length = 43657 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 443 taaacaaggaaaatatttttgttgg 467 |||||||||||||||||||| |||| Sbjct: 39550 taaacaaggaaaatatttttcttgg 39526
>gb|AF401588.1| Ictalurus punctatus ribosomal protein L34 mRNA, complete cds Length = 408 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 311 aggatcatccgtgctttcttggttgaggagcagaagattgt 351 ||||||| ||||||||| | ||||||||||||||||||| Sbjct: 284 aggatcaagcgtgctttccttattgaggagcagaagattgt 324
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 cccacctcaggcctactgaat 227 ||||||||||||||||||||| Sbjct: 5141 cccacctcaggcctactgaat 5121
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cccacctcaggcctactgaat 227 ||||||||||||||||||||| Sbjct: 102065 cccacctcaggcctactgaat 102085
>gb|AC121137.18| Mus musculus chromosome 14, clone RP23-406K12, complete sequence Length = 164557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gtacttgaaatccttctgcc 532 |||||||||||||||||||| Sbjct: 92595 gtacttgaaatccttctgcc 92614
>ref|XM_381604.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01428.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gcaggactgtgaaccgtccc 274 |||||||||||||||||||| Sbjct: 74 gcaggactgtgaaccgtccc 55
>gb|AC012061.4| Homo sapiens BAC clone CTD-2052D1 from 7, complete sequence Length = 81670 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 taaacaaggaaaatattttt 462 |||||||||||||||||||| Sbjct: 43455 taaacaaggaaaatattttt 43436
>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the 5' end of a novel gene, complete sequence Length = 152898 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 acaaggaaaatatttttgtt 465 |||||||||||||||||||| Sbjct: 143917 acaaggaaaatatttttgtt 143936
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ccacctcaggcctactgaat 227 |||||||||||||||||||| Sbjct: 57943 ccacctcaggcctactgaat 57962
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gaaaatatttttgttggtgg 470 |||||||||||||||||||| Sbjct: 29427 gaaaatatttttgttggtgg 29408
>emb|AL391069.11| Human DNA sequence from clone RP11-126K1 on chromosome 1 Contains the 3' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4, two novel genes, gene KIAA1441 (FLJ13043), the PIK4CB genen for phosphatidylinositol 4-kinase catalytic beta polypeptide, the RFX5 gene for regulatory factor X 5 (influences HLA class II expression), the SELENBP1 gene for selenium binding protein 1 and two CpG islands, complete sequence Length = 121357 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 gtgaagaaggtgttgaaaatacag 373 ||||||||| |||||||||||||| Sbjct: 84034 gtgaagaagctgttgaaaatacag 84057
>emb|AL645846.12| Mouse DNA sequence from clone RP23-244C22 on chromosome 11 Contains a novel gene, the Tob1 gene for transducer of ErbB-2.1, the gene for a novel protein (AY100450) (WFIKKN-like growth and differentiation factor-associated serum protein 1) (Gasp1), a novel gene, the gene for a novel protein (3300001P08Rik) (Luc7a) and one CpG island, complete sequence Length = 188962 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gtacttgaaatccttctgcc 532 |||||||||||||||||||| Sbjct: 102571 gtacttgaaatccttctgcc 102590
>gb|AC091175.11| Homo sapiens chromosome 8, clone RP11-146E23, complete sequence Length = 84551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tgtaaacaaggaaaatattt 460 |||||||||||||||||||| Sbjct: 13845 tgtaaacaaggaaaatattt 13826
>gb|AC118480.3| Homo sapiens BAC clone RP11-393K13 from 4, complete sequence Length = 108490 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 tgaagaaggtgttgaaaata 370 |||||||||||||||||||| Sbjct: 74524 tgaagaaggtgttgaaaata 74505
>gb|AC025479.8| Homo sapiens chromosome 8, clone RP11-358J8, complete sequence Length = 176647 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaaagtaatctgtttgaaa 414 |||||||||||||||||||| Sbjct: 38754 tcaaagtaatctgtttgaaa 38735
>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence Length = 183972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 taaacaaggaaaatattttt 462 |||||||||||||||||||| Sbjct: 66432 taaacaaggaaaatattttt 66451
>gb|AC097712.3| Homo sapiens BAC clone RP11-216H12 from 4, complete sequence Length = 184520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gaaaatatttttgttggtgg 470 |||||||||||||||||||| Sbjct: 65437 gaaaatatttttgttggtgg 65418
>ref|XM_683014.1| PREDICTED: Danio rerio similar to superkiller viralicidic activity 2-like (LOC559653), mRNA Length = 3231 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ttcttggttgaggagcagaa 345 |||||||||||||||||||| Sbjct: 54 ttcttggttgaggagcagaa 35
>gb|AC068399.9| Homo sapiens chromosome 8, clone RP11-809K10, complete sequence Length = 195367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaaagtaatctgtttgaaa 414 |||||||||||||||||||| Sbjct: 179309 tcaaagtaatctgtttgaaa 179290
>gb|AF287343.1|AF287343 Fuchsia hybrid cultivar Qiu 94208 ribosomal protein S10 mRNA, partial cds; nuclear gene for mitochondrial product Length = 407 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 aggagcagaagattgtgaagaagg 359 ||||||||||||| |||||||||| Sbjct: 209 aggagcagaagatggtgaagaagg 232
>gb|AC136977.4| Homo sapiens 12 BAC RP11-439H13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33795 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 taaacaaggaaaatattttt 462 |||||||||||||||||||| Sbjct: 15886 taaacaaggaaaatattttt 15867
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 gtgaagaaggtgttgaaaatacag 373 ||||||||| |||||||||||||| Sbjct: 138462 gtgaagaagctgttgaaaatacag 138439
>dbj|AP005366.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB565H3, complete sequence Length = 101002 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tcaaagtaatctgtttgaaa 414 |||||||||||||||||||| Sbjct: 54476 tcaaagtaatctgtttgaaa 54495
>gb|AF061604.1|AF061604 Pichia angusta ubiquitin-conjugating enzyme homolog peroxin 4 (PEX4) gene, complete cds Length = 1507 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 323 gctttcttggttgaggagcagaagattgtgaagaaggtgttgaa 366 ||||||||| |||| || || ||||| || |||||||||||||| Sbjct: 1165 gctttcttgattgaagaacaaaagatcgtcaagaaggtgttgaa 1122
>emb|BX510319.11| Zebrafish DNA sequence from clone CH211-221E5 in linkage group 8, complete sequence Length = 113234 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 aaacaaggaaaatatttttg 463 |||||||||||||||||||| Sbjct: 17505 aaacaaggaaaatatttttg 17524
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 aagtgccctgtgaccgggaa 189 |||||||||||||||||||| Sbjct: 110546 aagtgccctgtgaccgggaa 110565 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,989,388 Number of Sequences: 3902068 Number of extensions: 5989388 Number of successful extensions: 123926 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 123501 Number of HSP's gapped (non-prelim): 412 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
