ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009204.1| Triticum aestivum clone wle1n.pk0036.e2:fis, full... 147 4e-32
2gb|AY104310.1| Zea mays PCO130346 mRNA sequence 100 8e-18
3gb|AY104904.1| Zea mays PCO136403 mRNA sequence 84 4e-13
4ref|NM_190983.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
5dbj|AK111939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
6gb|U10079.1|ZMU10079 Zea mays B73 cyclin IaZm mRNA, partial cds 76 1e-10
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
8dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
9ref|NM_128233.2| Arabidopsis thaliana CYCB1;4 (CYCLIN 3); cyclin... 62 2e-06
10gb|BT015043.1| Arabidopsis thaliana At2g26760 gene, complete cds 62 2e-06
11gb|AY050781.1| Arabidopsis thaliana putative cyclin (At2g26760) ... 62 2e-06
12gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map... 62 2e-06
13emb|BX819284.1|CNS0A7ZW Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
14dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
16dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
17dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
18emb|Z37978.2|NTCYCMRN Nicotiana tabacum mRNA for cyclin B1 (cycB... 50 0.006
19gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.39
20gb|AC136452.4| Mus musculus BAC clone RP24-274L23 from chromosom... 44 0.39
21ref|XM_571708.1| Cryptococcus neoformans var. neoformans JEC21 h... 44 0.39
22emb|Y10161.1|CRCYC1 C.rubrum mRNA for mitotic cyclin 44 0.39
23gb|AC173998.3| Mus musculus BAC clone RP24-446E18 from chromosom... 44 0.39
24emb|AJ250315.1|PHY250315 Petunia hybrida mRNA for CYCB1-1 protei... 42 1.5
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27gb|AE004568.1| Pseudomonas aeruginosa PAO1, section 129 of 529 o... 42 1.5
28dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
29dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30gb|AY109811.1| Zea mays CL2527_1 mRNA sequence 42 1.5
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
32emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
33gb|U10078.1|ZMU10078 Zea mays B73 cyclin IbZm mRNA, complete cds 42 1.5
34gb|BC108424.1| Mus musculus cDNA clone IMAGE:6850499, containing... 40 6.0
35gb|BC059879.1| Mus musculus expressed sequence BM948371, mRNA (c... 40 6.0
36gb|BC080282.1| Mus musculus expressed sequence BM948371, mRNA (c... 40 6.0
37ref|XM_981450.1| PREDICTED: Mus musculus expressed sequence BM94... 40 6.0
38ref|XM_914385.2| PREDICTED: Mus musculus expressed sequence BM94... 40 6.0
39ref|XM_354696.5| PREDICTED: Mus musculus expressed sequence BM94... 40 6.0
40emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch... 40 6.0
41emb|AL592205.4| Human DNA sequence from clone RP11-184D20 on chr... 40 6.0
42ref|XM_503942.1| Yarrowia lipolytica CLIB122, YALI0E14443g predi... 40 6.0
43dbj|AB247280.1| Camellia sinensis cycb mRNA for cyclin B, comple... 40 6.0
44dbj|AB077360.1| Daucus carota DcCycB1-3 mRNA for Cyclin B1-3, co... 40 6.0
45dbj|AK158915.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 40 6.0
46dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.0
47gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complet... 40 6.0
48emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.0
49dbj|D89635.1| Nicotiana tabacum mRNA for B-type cyclin, complete... 40 6.0 
>gb|BT009204.1| Triticum aestivum clone wle1n.pk0036.e2:fis, full insert mRNA
           sequence
          Length = 951

 Score =  147 bits (74), Expect = 4e-32
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||| ||||| |||||||| |||||||| || |||||| |  ||||||||| |
Sbjct: 116 tgcaagtacgaagagatttgggctccagaggtgaacgacttcatattgttctccgacaac 175

                                                                       
Query: 63  gcctacacgagggagcagattcttaagatggagaaggcgatcctcaacaggctcgagtgg 122
            | || || |||||||||||||| | |||||||||||| ||||| |||| ||| ||||||
Sbjct: 176 acatatactagggagcagattctgaggatggagaaggcaatcctgaacatgcttgagtgg 235

                                                                
Query: 123 aacctgactgtgcccacgctctacgtcttcctcgtgcgcttcgccaaggccgc 175
           |||||||| |||||||| |  ||||||||||||||| | ||||||||||||||
Sbjct: 236 aacctgacagtgcccacaccttacgtcttcctcgtgtgattcgccaaggccgc 288
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>gb|AY104310.1| Zea mays PCO130346 mRNA sequence
          Length = 1970

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 112/133 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1    cctgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgaca 60
            ||||||||||||||||||| ||||| || |||||||| |||||||| ||||| || ||||
Sbjct: 1096 cctgcaagtacgaggagatttgggccccagaggtgaacgatttcattcttatatcagaca 1155

                                                                        
Query: 61   gcgcctacacgagggagcagattcttaagatggagaaggcgatcctcaacaggctcgagt 120
            | || ||||  ||||||||||| |||  |||||||||||  ||||| || || || ||||
Sbjct: 1156 gtgcatacagcagggagcagatcctttcgatggagaagggaatcctgaatagcctggagt 1215

                         
Query: 121  ggaacctgactgt 133
            ||||||| |||||
Sbjct: 1216 ggaacctcactgt 1228



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  tgtctacgccgccaggctcaccctcaacaagaccccgctgtggaccgacaccctgaggca 358
            ||||||||| ||||||||||| ||||| | | | || || |||||||||||||| | |||
Sbjct: 1388 tgtctacgcagccaggctcactctcaagagggctcccctctggaccgacaccctcaagca 1447

                          
Query: 359  ccacactggcttca 372
            |||||| |||||||
Sbjct: 1448 ccacacgggcttca 1461



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 207  gagatggagaacaccgtcttcttcttcgcggagctggcgctcctgcagtacgg 259
            ||||||||||| |  |||||||||||||| || ||||||||  ||||||||||
Sbjct: 1296 gagatggagaatatggtcttcttcttcgctgaactggcgctgatgcagtacgg 1348
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>gb|AY104904.1| Zea mays PCO136403 mRNA sequence
          Length = 1040

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 110/133 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgaca 60
           ||||||||||||||||||| ||||| || |||||||| || ||||| || || || ||||
Sbjct: 507 cctgcaagtacgaggagatttgggccccagaggtgaacgacttcatcctcatatcagaca 566

                                                                       
Query: 61  gcgcctacacgagggagcagattcttaagatggagaaggcgatcctcaacaggctcgagt 120
           | || ||||  || || |||||||||  |||||||||||  || || || ||||| ||||
Sbjct: 567 gtgcatacagtagagaacagattctttcgatggagaagggaattctgaataggctggagt 626

                        
Query: 121 ggaacctgactgt 133
           |||||||||||||
Sbjct: 627 ggaacctgactgt 639
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>ref|NM_190983.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                        
Query: 201  gacaaggagatggagaacaccgtcttcttcttcgcggagctggcgctcctgcagtacggg 260
            ||||||||||||||| |||  | |||||||||||| ||  |||| ||  |||||||||||
Sbjct: 1027 gacaaggagatggagcacatggccttcttcttcgctgaattggcactgatgcagtacggg 1086

                                                                        
Query: 261  ctggtgcagtccaagccgtccatggtcgccgccgntgctgtctacgccgccaggctcacc 320
            ||||||   |||  ||| |||| ||| || |||  ||||||||| || ||||||||||||
Sbjct: 1087 ctggtggcatccctgccttccaaggttgctgcctctgctgtctatgcagccaggctcacc 1146

                                                           
Query: 321  ctcaacaagaccccgctgtggaccgacaccctgaggcaccacactgg 367
            || || |||| ||| || ||||| ||||| || | ||||||||||||
Sbjct: 1147 ctgaagaagagccctctatggactgacactctcaagcaccacactgg 1193



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 832 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttgatatcagatagt 891

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 892 gcatacactagggaacagattcttgcaatggagaagg 928
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>dbj|AK111939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G01, full
           insert sequence
          Length = 1251

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 135/167 (80%)
 Strand = Plus / Plus

                                                                       
Query: 201 gacaaggagatggagaacaccgtcttcttcttcgcggagctggcgctcctgcagtacggg 260
           ||||||||||||||| |||  | |||||||||||| ||  |||| ||  |||||||||||
Sbjct: 665 gacaaggagatggagcacatggccttcttcttcgctgaattggcactgatgcagtacggg 724

                                                                       
Query: 261 ctggtgcagtccaagccgtccatggtcgccgccgntgctgtctacgccgccaggctcacc 320
           ||||||   |||  ||| |||| ||| || |||  ||||||||| || ||||||||||||
Sbjct: 725 ctggtggcatccctgccttccaaggttgctgcctctgctgtctatgcagccaggctcacc 784

                                                          
Query: 321 ctcaacaagaccccgctgtggaccgacaccctgaggcaccacactgg 367
           || || |||| ||| || ||||| ||||| || | ||||||||||||
Sbjct: 785 ctgaagaagagccctctatggactgacactctcaagcaccacactgg 831



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 470 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttgatatcagatagt 529

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 530 gcatacactagggaacagattcttgcaatggagaagg 566
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>gb|U10079.1|ZMU10079 Zea mays B73 cyclin IaZm mRNA, partial cds
          Length = 1497

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 109/133 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgaca 60
           ||||||||  ||||||||| ||||| || |||||||| |||||||| ||||| || ||||
Sbjct: 712 cctgcaagatcgaggagatttgggccccagaggtgaacgatttcattcttatatcagaca 771

                                                                       
Query: 61  gcgcctacacgagggagcagattcttaagatggagaaggcgatcctcaacaggctcgagt 120
           | || ||||  ||||||||||| |||  |||||||||||  ||||| || |  || ||||
Sbjct: 772 gtgcatacagcagggagcagatcctttcgatggagaagggaatcctgaataacctggagt 831

                        
Query: 121 ggaacctgactgt 133
           ||||||| |||||
Sbjct: 832 ggaacctcactgt 844



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  tgtctacgccgccaggctcaccctcaacaagaccccgctgtggaccgacaccctgaggca 358
            ||||||||| ||||||||||| ||||| | | | || || |||||||||||||| | |||
Sbjct: 1004 tgtctacgcagccaggctcactctcaagagggctcccctctggaccgacaccctcaagca 1063

                          
Query: 359  ccacactggcttca 372
            |||||| |||||||
Sbjct: 1064 ccacacgggcttca 1077



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 207 gagatggagaacaccgtcttcttcttcgcggagctggcgctcctgcagtacgg 259
           ||||||||||| |  |||||||||||||| || ||||||||  ||||||||||
Sbjct: 912 gagatggagaatatggtcttcttcttcgctgaactggcgctgatgcagtacgg 964
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 116/144 (80%)
 Strand = Plus / Minus

                                                                            
Query: 224      cttcttcttcgcggagctggcgctcctgcagtacgggctggtgcagtccaagccgtccat 283
                |||||||||||| ||  |||| ||  |||||||||||||||||   |||  ||| |||| 
Sbjct: 34143376 cttcttcttcgctgaattggcactgatgcagtacgggctggtggcatccctgccttccaa 34143317

                                                                            
Query: 284      ggtcgccgccgntgctgtctacgccgccaggctcaccctcaacaagaccccgctgtggac 343
                ||| || |||  ||||||||| || |||||||||||||| || |||| ||| || |||||
Sbjct: 34143316 ggttgctgcctctgctgtctatgcagccaggctcaccctgaagaagagccctctatggac 34143257

                                        
Query: 344      cgacaccctgaggcaccacactgg 367
                 ||||| || | ||||||||||||
Sbjct: 34143256 tgacactctcaagcaccacactgg 34143233



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 3        tgcaagtacgaggagatntgggctcctgaggt 34
                ||||||||||||||||| ||||| || |||||
Sbjct: 34143786 tgcaagtacgaggagatttgggccccagaggt 34143755
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>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034E02
          Length = 165497

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 116/144 (80%)
 Strand = Plus / Minus

                                                                          
Query: 224    cttcttcttcgcggagctggcgctcctgcagtacgggctggtgcagtccaagccgtccat 283
              |||||||||||| ||  |||| ||  |||||||||||||||||   |||  ||| |||| 
Sbjct: 139854 cttcttcttcgctgaattggcactgatgcagtacgggctggtggcatccctgccttccaa 139795

                                                                          
Query: 284    ggtcgccgccgntgctgtctacgccgccaggctcaccctcaacaagaccccgctgtggac 343
              ||| || |||  ||||||||| || |||||||||||||| || |||| ||| || |||||
Sbjct: 139794 ggttgctgcctctgctgtctatgcagccaggctcaccctgaagaagagccctctatggac 139735

                                      
Query: 344    cgacaccctgaggcaccacactgg 367
               ||||| || | ||||||||||||
Sbjct: 139734 tgacactctcaagcaccacactgg 139711



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 3      tgcaagtacgaggagatntgggctcctgaggt 34
              ||||||||||||||||| ||||| || |||||
Sbjct: 140264 tgcaagtacgaggagatttgggccccagaggt 140233
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>ref|NM_128233.2| Arabidopsis thaliana CYCB1;4 (CYCLIN 3); cyclin-dependent protein
           kinase regulator AT2G26760 (CYCB1;4) mRNA, complete cds
          Length = 1608

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttc 44
           |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 868 tgcaagtatgaggagatttgggctcctgaggttaatgatttc 909
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>gb|BT015043.1| Arabidopsis thaliana At2g26760 gene, complete cds
          Length = 1164

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttc 44
           |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 646 tgcaagtatgaggagatttgggctcctgaggttaatgatttc 687
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>gb|AY050781.1| Arabidopsis thaliana putative cyclin (At2g26760) mRNA, complete cds
          Length = 1637

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttc 44
           |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 868 tgcaagtatgaggagatttgggctcctgaggttaatgatttc 909
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>gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map B68, complete
             sequence
          Length = 95167

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 3     tgcaagtacgaggagatntgggctcctgaggtgaatgatttc 44
             |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 72585 tgcaagtatgaggagatttgggctcctgaggttaatgatttc 72626
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>emb|BX819284.1|CNS0A7ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB64ZA11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1522

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttc 44
           |||||||| |||||||| |||||||||||||| |||||||||
Sbjct: 882 tgcaagtatgaggagatttgggctcctgaggttaatgatttc 923
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>dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K24, full
           insert sequence
          Length = 2648

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 383 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagt 442

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 443 gcatacactagggaacagattcttgcaatggagaagg 479
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>dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N08, full
           insert sequence
          Length = 3232

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 695 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagt 754

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 755 gcatacactagggaacagattcttgcaatggagaagg 791
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>dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L20, full
           insert sequence
          Length = 4792

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 681 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagt 740

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 741 gcatacactagggaacagattcttgcaatggagaagg 777
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>dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P06, full
           insert sequence
          Length = 3020

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcatacttatctccgacagc 62
           ||||||||||||||||| ||||| || |||||||| || |||||  | || || || || 
Sbjct: 680 tgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagt 739

                                                
Query: 63  gcctacacgagggagcagattcttaagatggagaagg 99
           || ||||| ||||| |||||||||   ||||||||||
Sbjct: 740 gcatacactagggaacagattcttgcaatggagaagg 776
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>emb|Z37978.2|NTCYCMRN Nicotiana tabacum mRNA for cyclin B1 (cycB1 gene)
          Length = 1638

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgatttcat 46
           |||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 904 tgcaagtatgaagagatttgggcaccagaggtgaatgatttcat 947
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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 144     tacgtcttcctcgtgcgcttcg 165
               ||||||||||||||||||||||
Sbjct: 1212357 tacgtcttcctcgtgcgcttcg 1212378
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>gb|AC136452.4| Mus musculus BAC clone RP24-274L23 from chromosome Y, complete sequence
          Length = 155057

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 196   agaacgacaaggagatggagaa 217
             ||||||||||||||||||||||
Sbjct: 53138 agaacgacaaggagatggagaa 53159
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>ref|XM_571708.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNF04170) partial mRNA
          Length = 2967

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 144  tacgtcttcctcgtgcgcttcg 165
            ||||||||||||||||||||||
Sbjct: 1407 tacgtcttcctcgtgcgcttcg 1386
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>emb|Y10161.1|CRCYC1 C.rubrum mRNA for mitotic cyclin
          Length = 1600

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 3   tgcaagtacgaggagatntgggctcctgaggtgaatgattt 43
           |||||||| || || || ||||| |||||||||||||||||
Sbjct: 893 tgcaagtatgaagaaatttgggcacctgaggtgaatgattt 933
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>gb|AC173998.3| Mus musculus BAC clone RP24-446E18 from chromosome y, complete sequence
          Length = 142829

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   agaacgacaaggagatggagaa 217
             ||||||||||||||||||||||
Sbjct: 50435 agaacgacaaggagatggagaa 50414
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>emb|AJ250315.1|PHY250315 Petunia hybrida mRNA for CYCB1-1 protein (CycB1-1 gene)
          Length = 1821

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 3    tgcaagtacgaggagatntgggctcctgaggtgaatgatttcat 46
            |||||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 1006 tgcaagtatgaagagatttgggcaccagaggtcaatgatttcat 1049
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 274      agccgtccatggtcgccgccg 294
                |||||||||||||||||||||
Sbjct: 23462063 agccgtccatggtcgccgccg 23462083
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 3        tgcaagtacgaggagatntgggctcctgaggt 34
                ||||||||||||||||| ||||| || |||||
Sbjct: 34171893 tgcaagtacgaggagatttgggccccagaggt 34171862



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 3        tgcaagtacgaggagatntgggctcctgaggt 34
                ||||||||||||||||| ||||| || |||||
Sbjct: 34142176 tgcaagtacgaggagatttgggccccagaggt 34142145



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 3        tgcaagtacgaggagatntgggctcctgaggt 34
                ||||||||||||||||| ||||| || |||||
Sbjct: 34117624 tgcaagtacgaggagatttgggccccagaggt 34117593
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>gb|AE004568.1| Pseudomonas aeruginosa PAO1, section 129 of 529 of the complete
           genome
          Length = 14888

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 tcgtgcgcttcgccaaggccg 174
           |||||||||||||||||||||
Sbjct: 642 tcgtgcgcttcgccaaggccg 662
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>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0032L17
          Length = 165808

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 3     tgcaagtacgaggagatntgggctcctgaggt 34
             ||||||||||||||||| ||||| || |||||
Sbjct: 99407 tgcaagtacgaggagatttgggccccagaggt 99376



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 3     tgcaagtacgaggagatntgggctcctgaggt 34
             ||||||||||||||||| ||||| || |||||
Sbjct: 69690 tgcaagtacgaggagatttgggccccagaggt 69659



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 3     tgcaagtacgaggagatntgggctcctgaggt 34
             ||||||||||||||||| ||||| || |||||
Sbjct: 45138 tgcaagtacgaggagatttgggccccagaggt 45107
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>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0689B12
          Length = 154745

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 3    tgcaagtacgaggagatntgggctcctgaggt 34
            ||||||||||||||||| ||||| || |||||
Sbjct: 7166 tgcaagtacgaggagatttgggccccagaggt 7135
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>gb|AY109811.1| Zea mays CL2527_1 mRNA sequence
          Length = 1687

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 1   cctgcaagtacgaggagatntgggctcctgaggtgaatga 40
           ||||||| ||||||||||| ||||| || ||||| |||||
Sbjct: 902 cctgcaaatacgaggagatctgggcaccggaggtaaatga 941
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 274      agccgtccatggtcgccgccg 294
                |||||||||||||||||||||
Sbjct: 23390254 agccgtccatggtcgccgccg 23390274
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   agccgtccatggtcgccgccg 294
             |||||||||||||||||||||
Sbjct: 40096 agccgtccatggtcgccgccg 40076
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>gb|U10078.1|ZMU10078 Zea mays B73 cyclin IbZm mRNA, complete cds
          Length = 1679

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 1   cctgcaagtacgaggagatntgggctcctgaggtgaatga 40
           ||||||| ||||||||||| ||||| || ||||| |||||
Sbjct: 902 cctgcaaatacgaggagatctgggcaccggaggtaaatga 941
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>gb|BC108424.1| Mus musculus cDNA clone IMAGE:6850499, containing frame-shift errors
          Length = 2627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1039 cgcttcgccaaggccgcgtc 1058
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>gb|BC059879.1| Mus musculus expressed sequence BM948371, mRNA (cDNA clone
            IMAGE:6812166), with apparent retained intron
          Length = 2756

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1153 cgcttcgccaaggccgcgtc 1172
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>gb|BC080282.1| Mus musculus expressed sequence BM948371, mRNA (cDNA clone
           IMAGE:5690720), partial cds
          Length = 2537

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 cgcttcgccaaggccgcgtc 178
           ||||||||||||||||||||
Sbjct: 939 cgcttcgccaaggccgcgtc 958
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>ref|XM_981450.1| PREDICTED: Mus musculus expressed sequence BM948371 (BM948371), mRNA
          Length = 3343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1777 cgcttcgccaaggccgcgtc 1796
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>ref|XM_914385.2| PREDICTED: Mus musculus expressed sequence BM948371, transcript
            variant 3 (BM948371), mRNA
          Length = 3358

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1777 cgcttcgccaaggccgcgtc 1796
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>ref|XM_354696.5| PREDICTED: Mus musculus expressed sequence BM948371, transcript
            variant 1 (BM948371), mRNA
          Length = 3277

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1711 cgcttcgccaaggccgcgtc 1730
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>emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on chromosome 10 Contains a
             ribosomal protein S6 (RPS6) pseudogene, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tcctccacagaccacaagaa 199
             ||||||||||||||||||||
Sbjct: 69849 tcctccacagaccacaagaa 69830
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>emb|AL592205.4| Human DNA sequence from clone RP11-184D20 on chromosome 1, complete
             sequence
          Length = 127824

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    cctgaggtgaatgatttcat 46
             ||||||||||||||||||||
Sbjct: 81666 cctgaggtgaatgatttcat 81685
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>ref|XM_503942.1| Yarrowia lipolytica CLIB122, YALI0E14443g predicted mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 222 gtcttcttcttcgcggagctggcg 245
           |||||||||||||||| |||||||
Sbjct: 214 gtcttcttcttcgcggtgctggcg 237
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>dbj|AB247280.1| Camellia sinensis cycb mRNA for cyclin B, complete cds
          Length = 1323

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 72  agggagcagattcttaagatggagaaggcgat 103
           ||||| ||||||||||  ||||||||||||||
Sbjct: 859 agggaacagattcttatcatggagaaggcgat 890
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>dbj|AB077360.1| Daucus carota DcCycB1-3 mRNA for Cyclin B1-3, complete cds
          Length = 1546

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 15  gagatntgggctcctgaggtgaatgatttca 45
           ||||| ||||| ||||| |||||||||||||
Sbjct: 912 gagatctgggcacctgaagtgaatgatttca 942
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>dbj|AK158915.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K530006G07 product:Brain-enriched guanylate
            kinase-associated protein 1 homolog [Rattus norvegicus],
            full insert sequence
          Length = 2709

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  cgcttcgccaaggccgcgtc 178
            ||||||||||||||||||||
Sbjct: 1148 cgcttcgccaaggccgcgtc 1167
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    tcttcctcgtgcgcttcgccaagg 171
              |||||||| |||||||||||||||
Sbjct: 838430 tcttcctcctgcgcttcgccaagg 838407
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>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence
          Length = 175729

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    cgcttcgccaaggccgcgtc 178
              ||||||||||||||||||||
Sbjct: 111855 cgcttcgccaaggccgcgtc 111836
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 222     gtcttcttcttcgcggagctggcg 245
               |||||||||||||||| |||||||
Sbjct: 1730141 gtcttcttcttcgcggtgctggcg 1730118
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>dbj|D89635.1| Nicotiana tabacum mRNA for B-type cyclin, complete cds
          Length = 1597

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  tgggctcctgaggtgaatga 40
           ||||||||||||||||||||
Sbjct: 924 tgggctcctgaggtgaatga 943


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,641,219
Number of Sequences: 3902068
Number of extensions: 3641219
Number of successful extensions: 53742
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53532
Number of HSP's gapped (non-prelim): 206
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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