ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags6a03 |
|---|---|
| Clone Library Name | barley_pub |
>PA2G6_MOUSE (P97819) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 752 Score = 42.7 bits (99), Expect = 0.001 Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 29/181 (16%) Frame = +3 Query: 186 VWEAIRASSAAPYYLDDFSDDVNRWQDGAIVANNPTIFAIREAQLLWPD----------T 335 VW A R+S AAP Y R+ DG ++ANNPT+ A+ E D Sbjct: 576 VWRAARSSGAAPTYFRPNG----RFLDGGLLANNPTLDAMTEIHEYNQDMIRKGQGNKVK 631 Query: 336 RIDCLVSIGCGSVP--------TKSRRGGWRYLDT-------GQVLIESACSVERVEETL 470 ++ +VS+G G P W T G+++++ C + + Sbjct: 632 KLSIVVSLGTGKSPQVPVTCVDVFRPSNPWELAKTVFGAKELGKMVVD--CCTDPDGRAV 689 Query: 471 DTLIPM--LPEMQYFRFNPVDDRCGME--LDETDPAVWLKLEAATEEYIQKNLQVFKNVC 638 D + +QYFR NP + G + LDE AV + TE YI ++ + F+ + Sbjct: 690 DRARAWCEMVGIQYFRLNP---QLGSDIMLDEVSDAVLVNALWETEVYIYEHREEFQKLV 746 Query: 639 E 641 + Sbjct: 747 Q 747
>PA2G6_RAT (P97570) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 751 Score = 41.6 bits (96), Expect = 0.002 Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 29/181 (16%) Frame = +3 Query: 186 VWEAIRASSAAPYYLDDFSDDVNRWQDGAIVANNPTIFAIREAQLLWPD----------T 335 VW A R+S AAP Y R+ DG ++ANNPT+ A+ E D Sbjct: 575 VWRAARSSGAAPTYFRPNG----RFLDGGLLANNPTLDAMTEIHEYNQDMIRKGQGNKVK 630 Query: 336 RIDCLVSIGCGSVP--------TKSRRGGWRYLDT-------GQVLIESACSVERVEETL 470 ++ +VS+G G P W T G+++++ C + + Sbjct: 631 KLSIVVSLGTGKSPQVPVTCVDVFRPSNPWELAKTVFGAKELGKMVVD--CCTDPDGRAV 688 Query: 471 DTLIPM--LPEMQYFRFNPVDDRCGME--LDETDPAVWLKLEAATEEYIQKNLQVFKNVC 638 D + +QYFR NP + G + LDE AV + TE YI + + F+ + Sbjct: 689 DRARAWCEMVGIQYFRLNP---QLGSDIMLDEVSDAVLVNALWETEVYIYEYREEFQKLV 745 Query: 639 E 641 + Sbjct: 746 Q 746
>PA2G6_HUMAN (O60733) 85 kDa calcium-independent phospholipase A2 (EC 3.1.1.4)| (iPLA2) (CaI-PLA2) (Group VI phospholipase A2) (GVI PLA2) Length = 806 Score = 40.8 bits (94), Expect = 0.003 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 29/181 (16%) Frame = +3 Query: 186 VWEAIRASSAAPYYLDDFSDDVNRWQDGAIVANNPTIFAIREAQLLWPD----------T 335 VW A R+S AAP Y R+ DG ++ANNPT+ A+ E D Sbjct: 630 VWRAARSSGAAPTYFRPNG----RFLDGGLLANNPTLDAMTEIHEYNQDLIRKGQANKVK 685 Query: 336 RIDCLVSIGCG---------------SVPTKSRRGGWRYLDTGQVLIESACSVERVEETL 470 ++ +VS+G G S P + + + + G+++++ C + + Sbjct: 686 KLSIVVSLGTGRSPQVPVTCVDVFRPSNPWELAKTVFGAKELGKMVVD--CCTDPDGRAV 743 Query: 471 DTLIPM--LPEMQYFRFNPVDDRCGME--LDETDPAVWLKLEAATEEYIQKNLQVFKNVC 638 D + +QYFR NP + G + LDE V + TE YI ++ + F+ + Sbjct: 744 DRARAWCEMVGIQYFRLNP---QLGTDIMLDEVSDTVLVNALWETEVYIYEHREEFQKLI 800 Query: 639 E 641 + Sbjct: 801 Q 801
>EBPL_HUMAN (Q9BY08) Emopamil-binding protein-like (Emopamil-binding-related| protein) Length = 206 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -1 Query: 155 TFNPNWCTRNNRSNCTSRWTFCHSW*YLQSAGWILIVXEIYMVGQAW 15 TF P W TR+ N TS W +C + + + W+LI ++ Q+W Sbjct: 145 TFLPEWLTRSPNLN-TSNWLYCWLYLFFFNGVWVLIPG--LLLWQSW 188
>ACSA_SYNEL (Q8DKH2) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 656 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = +3 Query: 60 PGTLEVSPGMAESPSTGAVGTVV--SGAPVGIKRGAFM 167 PG L + PG A P G + VV G PVG+ G ++ Sbjct: 434 PGALPMKPGSASKPFPGILADVVDLEGNPVGVNEGGYL 471
>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = -2 Query: 286 LFATIAPSCQRFTSSEKSSR*YGAADDALMASHT*CLQLPIKAPRLIPTGAPETTVPTAP 107 +F +PSC + S+ SS A +L+ S + Q+P +P L PT +P P+ P Sbjct: 821 IFPITSPSCHPYPFSQVSSNPCPQAPSSLLPSSSGASQVPFPSPSL-PTSSPLPFSPSYP 879
>AMYB_PAEPO (P21543) Beta/alpha-amylase precursor [Includes: Beta-amylase (EC| 3.2.1.2); Alpha-amylase (EC 3.2.1.1)] Length = 1196 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 Query: 45 NYQYPPGTLEVSPGMAESPSTGAVGTVVSGAPVGIKRG 158 NY + GT +PG ++G GT+ SGAP G G Sbjct: 530 NYSFSTGTSTYTPG-----NSGNAGTITSGAPAGANPG 562
>NPHN_HUMAN (O60500) Nephrin precursor (Renal glomerulus-specific cell adhesion| receptor) Length = 1241 Score = 31.2 bits (69), Expect = 2.7 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 175 QLPIKAPRLI-PTGAPETTVPTAPVDGLSAIP 83 QLPI P L P+G PE +PT P G S +P Sbjct: 1030 QLPITTPGLHQPSGEPEDQLPTEPPSGPSGLP 1061
>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein| kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1222 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = -2 Query: 286 LFATIAPSCQRFTSSEKSSR*YGAADDALMASHT*CLQLPIKAPRLIPTGAPETTVPTAP 107 +F +PSC S+ SS Y A +L+ + Q+P+ + L P AP P+ P Sbjct: 821 IFPITSPSCYPCPFSQVSSNPYPQAPSSLLPLSSSASQVPLPSSSL-PISAPLPFSPSYP 879 Query: 106 VDGLS 92 D LS Sbjct: 880 QDPLS 884
>ZN533_HUMAN (Q569K4) Zinc finger protein 533| Length = 471 Score = 30.8 bits (68), Expect = 3.5 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Frame = +3 Query: 9 SAPCLPNHIYFGNYQYPPGTLEVSPGMAESPS---TGAVGTVVSGAPVGIKRGAFMGSCK 179 S+ P+ G++ GT + PG A SPS GA GTVV K+ + CK Sbjct: 232 SSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCK 291
>CHCH6_MOUSE (Q91VN4) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 6 Length = 273 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -2 Query: 172 LPIKAPRLIPTGAPETTVPTAPVDGLSAIPGDTSRVP 62 +P+ A + AP T VPTAP + +PG T + P Sbjct: 65 VPLPAISVPTVPAPTTPVPTAPSSSVRGLPGGTCKGP 101
>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1| kinase) (SAD1A) Length = 794 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 178 LQLPIKAPRLIPTGAPETTVPTAPVDGL 95 L P+ PR PTG P TT P +P G+ Sbjct: 533 LHSPLHTPRASPTGTPGTTPPPSPGGGV 560
>NUGC_SOYBN (P31174) NAD(P)H-quinone oxidoreductase chain J, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain J) (NADH-plastoquinone oxidoreductase subunit J) Length = 158 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 257 LARWSYCSKQSHDLCNKRSTTFVA*YENRLPSFNWVWLSSN*EPERWMALLG 412 L R Y Q ++C K FVA R+PS WVW S++ + + +LG Sbjct: 71 LTRLEYGIDQPEEVCIK---IFVARKNPRIPSIFWVWKSADFQEKESYDMLG 119
>GH36_ORYSA (Q60EY1) Probable indole-3-acetic acid-amido synthetase GH3.6 (EC| 6.3.2.-) (Auxin-responsive GH3-like protein 6) (OsGH3-6) Length = 488 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 7/96 (7%) Frame = +3 Query: 321 LWPDTRIDCLVSIGCGS--VPTKSRRGGWRYLDTGQVLIESACSV----ERVEETLDTLI 482 LWPD R V+ G P G G + S C++ ER +T Sbjct: 133 LWPDARYISCVTTGTMEQYFPAIKHFAGEALPVLGTDYLASECAIGINLERTSPPEETTY 192 Query: 483 PMLPEMQYFRFNPVD-DRCGMELDETDPAVWLKLEA 587 +LP YF F P D D G +P +EA Sbjct: 193 VLLPRAAYFEFIPFDMDAAGRGAAAAEPVDIAGVEA 228
>CT174_HUMAN (Q5JPB2) Protein C20orf174| Length = 1082 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/68 (26%), Positives = 26/68 (38%) Frame = -2 Query: 268 PSCQRFTSSEKSSR*YGAADDALMASHT*CLQLPIKAPRLIPTGAPETTVPTAPVDGLSA 89 PSC R K ++ G D + S +LPI AP PT + Sbjct: 413 PSCSRPQDGRKGAQLGGDKGDRMATSRPAARELPISAPGAPREATSSPPTPTCEAHLVQD 472 Query: 88 IPGDTSRV 65 + GD+ R+ Sbjct: 473 MEGDSHRI 480
>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch| Length = 5412 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/79 (29%), Positives = 35/79 (44%) Frame = +3 Query: 60 PGTLEVSPGMAESPSTGAVGTVVSGAPVGIKRGAFMGSCKHHVWEAIRASSAAPYYLDDF 239 P T VSPG+ STG+ G+V+ + G G C+ A SS+ P D Sbjct: 4776 PPTAPVSPGVKAMSSTGSAGSVIGAGAGAVAAG---GKCESSA--ASIVSSSGPMSPKDI 4830 Query: 240 SDDVNRWQDGAIVANNPTI 296 S + GA+ + + +I Sbjct: 4831 S---GKSSPGALTSESQSI 4846
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +3 Query: 306 REAQLLWPDTR-IDCLVSIGCGSVPTKSRRGGWRYLDTGQVLIESACSVERVEETLDTLI 482 R+ L PD R ID + G S+P KS GW+ + L A S + EE LD Sbjct: 195 RKRVLTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAE----LYSPASSPGQPEENLDRYT 250 Query: 483 PMLPE 497 LP+ Sbjct: 251 LRLPQ 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,803,086 Number of Sequences: 219361 Number of extensions: 2256489 Number of successful extensions: 6354 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6059 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6349 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
