ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOLB_CHLTE (Q8KEQ0) Protein tolB precursor 45 9e-05
2TOLB_HAEIN (P44677) Protein tolB precursor 44 1e-04
3TOLB_RICCN (Q92IL4) Protein tolB precursor 44 2e-04
4TOLB_RICTY (Q68X69) Protein tolB precursor 43 3e-04
5TOLB_PASMU (Q9CM71) Protein tolB precursor 43 3e-04
6TOLB_RICPR (Q9ZDM5) Protein tolB precursor 42 4e-04
7TOLB_SILPO (Q5LNU4) Protein tolB precursor 41 0.001
8TOLB_ZYMMO (Q5NR65) Protein tolB precursor 39 0.004
9TOLB_ANAMM (Q5PBH8) Protein tolB precursor 39 0.006
10TOLB_METCA (Q609K4) Protein tolB precursor 38 0.008
11TOLB_RHILO (Q98F84) Protein tolB precursor 38 0.008
12TOLB_RHIME (Q926C2) Protein tolB precursor 38 0.011
13TOLB_CAUCR (Q9A3H4) Protein tolB precursor 37 0.018
14TOLB_AZOSE (Q5P4Z6) Protein tolB precursor 35 0.054
15TOLB_RHOPA (Q6NAR1) Protein tolB precursor 35 0.070
16TOLB_BRUSU (Q8FZ07) Protein tolB precursor 34 0.12
17TOLB_BRUME (Q93TG4) Protein tolB precursor 34 0.12
18TOLB_BRAJA (Q89ED5) Protein tolB precursor 34 0.16
19TOLB_HAEDU (Q7VKU3) Protein tolB precursor 34 0.16
20TOLB_AGRT5 (Q8U9L4) Protein tolB precursor 33 0.20
21TOLB_GEOSL (Q74H67) Protein tolB precursor 33 0.35
22TOLB_MYXXA (Q84FF7) Protein tolB precursor (Adventurous gliding ... 32 0.59
23TOLB_CHLPN (Q9Z7C4) Protein tolB precursor 32 0.78
24TOLB_YERPS (Q66D90) Protein tolB precursor 32 0.78
25TOLB_YERPE (Q8ZGZ1) Protein tolB precursor 32 0.78
26Y1656_AGRT5 (Q8UEU8) Hypothetical protein ATU1656/AGR_C_3050 31 1.0
27TOLB_BARHE (Q6G5R6) Protein tolB precursor 31 1.0
28TOLB_CHLCV (Q821G5) Protein tolB precursor 31 1.0
29TOLB_PSEAE (P50601) Protein tolB precursor 31 1.3
30TOLB_PHOLL (Q7N6T6) Protein tolB precursor 31 1.3
31TOLB_BARQU (Q6FYQ1) Protein tolB precursor 29 5.0
32ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase it... 28 6.6
33KI21B_MOUSE (Q9QXL1) Kinesin family member 21B (Kinesin-like pro... 28 6.6
34SYE_ARCFU (O29979) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... 28 8.6
35PYRD_DROME (P32748) Dihydroorotate dehydrogenase, mitochondrial ... 28 8.6
36ALR_NEIMB (Q9JYC4) Alanine racemase (EC 5.1.1.1) 28 8.6
37ALR_NEIMA (Q9JTA6) Alanine racemase (EC 5.1.1.1) 28 8.6

>TOLB_CHLTE (Q8KEQ0) Protein tolB precursor|
          Length = 434

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = +1

Query: 166 RLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDG 345
           RLT G      P+ +P G K  F STR GG + F           + + + G V RLT  
Sbjct: 284 RLTKGGGIDVSPTFSPDGSKMAFVSTRQGGPQIF-----------IQDMNSGQVRRLTYS 332

Query: 346 PWTDTHCSWSXRGDWVVFXSTRE 414
              +T  SWS  GD +++ S ++
Sbjct: 333 GIYNTQPSWSPNGDKILYSSMQK 355



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 28/84 (33%), Positives = 38/84 (45%)
 Frame = +1

Query: 37  AWNQNPDKDTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFPSSNPX 216
           +W+ N DK  LY     S   +    I++I N  G      + +LT G      PS +P 
Sbjct: 340 SWSPNGDK-ILY----SSMQKSGEINIFSI-NVDGSG----LLQLTSGSGNNEHPSWSPD 389

Query: 217 GDKFVFRSTRDGGXEKFHKNLYIM 288
           G   VF STRDG      + LY+M
Sbjct: 390 GSMIVFSSTRDG-----RRRLYVM 408



to top

>TOLB_HAEIN (P44677) Protein tolB precursor|
          Length = 427

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
 Frame = +1

Query: 10  RGSNAVFSTAWNQNPDKDTL-YVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXX 186
           R +  + S AW+  PD   L YV    SF   K   +    N    S  RKV     G  
Sbjct: 199 RSAQPIMSPAWS--PDGQRLAYV----SFENKKSQLVVQDLN----SGARKVVASFQGHN 248

Query: 187 XXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHC 366
               P+ +P G +  F S+RDG       N+Y+M        + GT T+LT G   +T  
Sbjct: 249 GA--PAFSPDGSRLAFASSRDGVL-----NIYVM------GANGGTPTQLTSGAGNNTEP 295

Query: 367 SWSXRGDWVVFXSTR 411
           +WS  G+ ++F S R
Sbjct: 296 AWSPDGNSILFTSDR 310



to top

>TOLB_RICCN (Q92IL4) Protein tolB precursor|
          Length = 444

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +1

Query: 148 AGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT- 324
           A +++ +LTDG      PS +P G K V+ S R+G  +     LYIM        S+G+ 
Sbjct: 276 ATKQLHKLTDGFGINTSPSYSPDGKKIVYNSDRNGVPQ-----LYIMN-------SDGSD 323

Query: 325 VTRLTDGPWTDTHCSWSXRGDWVVF 399
           V R++ G  +    SWS RGD++ F
Sbjct: 324 VQRISFGGGSYAAPSWSPRGDYIAF 348



to top

>TOLB_RICTY (Q68X69) Protein tolB precursor|
          Length = 443

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +1

Query: 148 AGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT- 324
           A +++ +LTDG      PS +P G K V+ S ++G  +     LYIM        S+G+ 
Sbjct: 275 ATKQLNKLTDGFGINTSPSYSPDGKKIVYNSDKNGVPQ-----LYIMN-------SDGSD 322

Query: 325 VTRLTDGPWTDTHCSWSXRGDWVVF 399
           V R++ G  +    SWS RGD++ F
Sbjct: 323 VRRISFGGGSYASPSWSPRGDYIAF 347



to top

>TOLB_PASMU (Q9CM71) Protein tolB precursor|
          Length = 432

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 38/134 (28%), Positives = 56/134 (41%)
 Frame = +1

Query: 10  RGSNAVFSTAWNQNPDKDTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXX 189
           R +  + S AW+ +  K   YV    SF   K   +         S  RKV    +G   
Sbjct: 202 RSAQPLMSPAWSHD-GKKLAYV----SFENKKSQLVVQDLG----SGARKVVASFNGHNG 252

Query: 190 XAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCS 369
              P+ +P G +  F S++DG       N+Y+M          G +++LT G   +T  S
Sbjct: 253 A--PAFSPDGSRLAFASSKDGVL-----NIYVMN------LGSGQISQLTSGTGNNTEPS 299

Query: 370 WSXRGDWVVFXSTR 411
           WS  G  +VF S R
Sbjct: 300 WSPDGQTIVFTSDR 313



to top

>TOLB_RICPR (Q9ZDM5) Protein tolB precursor|
          Length = 443

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +1

Query: 148 AGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT- 324
           A +++ +LT+G      PS +P G K VF S ++G  +     LYIM        S+G+ 
Sbjct: 275 ATKQLNKLTNGFGINTSPSYSPDGKKIVFNSDKNGVPQ-----LYIMN-------SDGSD 322

Query: 325 VTRLTDGPWTDTHCSWSXRGDWVVF 399
           V R++ G  +    SWS RGD++ F
Sbjct: 323 VQRISFGVGSYASPSWSPRGDYIAF 347



to top

>TOLB_SILPO (Q5LNU4) Protein tolB precursor|
          Length = 439

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 38/130 (29%), Positives = 52/130 (40%)
 Frame = +1

Query: 10  RGSNAVFSTAWNQNPDKDTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXX 189
           +  +   S A   +PD  T+      S +     ++YA+  ASG S      RLT     
Sbjct: 245 QSQDGTMSFAPRFSPDGQTVLF----SLAQGGNTDLYAMNIASGQST-----RLTSAPSI 295

Query: 190 XAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCS 369
              PS  P G + VF S R G  +     LY+M  A       G  TR++ G        
Sbjct: 296 ETAPSYAPDGSRIVFESDRSGTPQ-----LYVMSAA------GGEATRISFGQGRYGTPV 344

Query: 370 WSXRGDWVVF 399
           WS RGD + F
Sbjct: 345 WSPRGDLIAF 354



 Score = 33.1 bits (74), Expect = 0.27
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 8/125 (6%)
 Frame = +1

Query: 61  DTLYVCVGPSFSXAKPXEIYAIXNASGP--------SAGRKVXRLTDGXXXXAFPSSNPX 216
           D+  + + P FS      +Y       P           ++V +  DG    A P  +P 
Sbjct: 202 DSSSIVLAPRFSPTGDRVLYTSYQGGFPRIHILDVGQVQQRVLQSQDGTMSFA-PRFSPD 260

Query: 217 GDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXRGDWVV 396
           G   +F   + G  + +  N+           + G  TRLT  P  +T  S++  G  +V
Sbjct: 261 GQTVLFSLAQGGNTDLYAMNI-----------ASGQSTRLTSAPSIETAPSYAPDGSRIV 309

Query: 397 FXSTR 411
           F S R
Sbjct: 310 FESDR 314



to top

>TOLB_ZYMMO (Q5NR65) Protein tolB precursor|
          Length = 458

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
 Frame = +1

Query: 49  NPDKDTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFPSSNPXGDKF 228
           +PD  T+      S S A   +IY +     P +G +  RLT        PS +P G K 
Sbjct: 279 SPDGKTIVF----SMSVAGNTDIYKV-----PVSGGQATRLTTSPGIDTAPSFSPDGSKI 329

Query: 229 VFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT-VTRLTDGPWTDTHCSWSXRGDWVVF 399
           VF S R G      + +YIM        ++G+   R++ G        WS RGD + F
Sbjct: 330 VFESDRSGS-----QQIYIMN-------ADGSNQNRISFGSGRYATPVWSPRGDLIAF 375



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/68 (33%), Positives = 28/68 (41%)
 Frame = +1

Query: 208 NPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXRGD 387
           N     F  R + DG    F  ++    D      S G  TRLT  P  DT  S+S  G 
Sbjct: 268 NKPNTTFAPRFSPDGKTIVFSMSVAGNTDIYKVPVSGGQATRLTTSPGIDTAPSFSPDGS 327

Query: 388 WVVFXSTR 411
            +VF S R
Sbjct: 328 KIVFESDR 335



to top

>TOLB_ANAMM (Q5PBH8) Protein tolB precursor|
          Length = 441

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
 Frame = +1

Query: 88  SFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKF 267
           S S      IY+I   SG S      RLT+        S +P     VF S R G     
Sbjct: 265 SESAQGSTNIYSIDLKSGKST-----RLTNDRSINTSASYSPDKKSIVFNSDRSG----- 314

Query: 268 HKNLYIMEDAEVGEFSEGT-VTRLTDGPWTDTHCSWSXRGDWVVFXST 408
              LY+M        ++GT   R++ G    +  +WS RGDW+ F  T
Sbjct: 315 RPQLYVMN-------ADGTNQRRISSGKGGYSAPAWSPRGDWIAFTKT 355



to top

>TOLB_METCA (Q609K4) Protein tolB precursor|
          Length = 424

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 37/129 (28%), Positives = 56/129 (43%)
 Frame = +1

Query: 25  VFSTAWNQNPDKDTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFPS 204
           + S AW+ +  K   YV    SF   +   IY    A+G    RKV   +D       P+
Sbjct: 201 IMSPAWSPDGTK-IAYV----SFESRRSA-IYVQTLATGER--RKV---SDAPGINGAPA 249

Query: 205 SNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXRG 384
            +P G +     ++DG     + ++Y+M          G +TR+TD    DT  +WS  G
Sbjct: 250 FSPDGSRLALTLSKDG-----NPDIYVMN------LGSGGLTRITDYSGIDTEPNWSRDG 298

Query: 385 DWVVFXSTR 411
             +VF S R
Sbjct: 299 RSIVFTSDR 307



to top

>TOLB_RHILO (Q98F84) Protein tolB precursor|
          Length = 436

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 26/82 (31%), Positives = 36/82 (43%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R   RLT+       PS +P G K VF S R G  +     +Y+M     G+      TR
Sbjct: 284 RSTTRLTNSTAIDTSPSYSPDGSKVVFTSDRGGRAQ-----IYVMGADGSGQ------TR 332

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
           ++ G    +   WS RGD + F
Sbjct: 333 ISFGDGVYSTPVWSPRGDLIAF 354



 Score = 32.7 bits (73), Expect = 0.35
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P  +P G K +    RD G    + N++ M+          + TRLT+    DT  S+S 
Sbjct: 254 PRFSPDGQKVIMSLLRDDG----NSNIFAMD------LRSRSTTRLTNSTAIDTSPSYSP 303

Query: 379 RGDWVVFXSTR 411
            G  VVF S R
Sbjct: 304 DGSKVVFTSDR 314



to top

>TOLB_RHIME (Q926C2) Protein tolB precursor|
          Length = 436

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 26/82 (31%), Positives = 37/82 (45%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R   RLT+       PS +P G + VF S R G      + LY+M     G+      TR
Sbjct: 282 RTTTRLTNTAAIDTSPSYSPDGSRIVFESDRGG-----KQQLYVMGADGSGQ------TR 330

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
           ++ G  + +   WS RGD + F
Sbjct: 331 ISFGDGSYSTPVWSPRGDLIAF 352



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P  +P G + +    ++G       N+Y M+          T TRLT+    DT  S+S 
Sbjct: 253 PRFSPDGQRVIMSLQQEGNA-----NIYTMD------LRSRTTTRLTNTAAIDTSPSYSP 301

Query: 379 RGDWVVFXSTR 411
            G  +VF S R
Sbjct: 302 DGSRIVFESDR 312



to top

>TOLB_CAUCR (Q9A3H4) Protein tolB precursor|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 26/82 (31%), Positives = 35/82 (42%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R   R+T        PS +P G K VF S R G  +     +Y+M     G      V R
Sbjct: 279 RATTRITTDPAIDTSPSFSPDGTKIVFNSDRGGQAQ-----IYVMNTDGSG------VRR 327

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
           ++ G    T   WS RGD++ F
Sbjct: 328 ISYGGGRYTTPVWSPRGDFIAF 349



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
 Frame = +1

Query: 61  DTLYVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFPSS------NPXGD 222
           D  Y+ + P FS       Y     +G S        +       FP        +P G 
Sbjct: 198 DGSYIVMTPRFSSTSQELTYMALRPTGSSIYLLNLETSRQETVGKFPGMVFAPRFSPDGS 257

Query: 223 KFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXRGDWVVFX 402
           K  F   R+G  +     +Y+M+            TR+T  P  DT  S+S  G  +VF 
Sbjct: 258 KVAFSVERNGNSD-----IYVMD------LRSRATTRITTDPAIDTSPSFSPDGTKIVFN 306

Query: 403 STR 411
           S R
Sbjct: 307 SDR 309



to top

>TOLB_AZOSE (Q5P4Z6) Protein tolB precursor|
          Length = 426

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 1/130 (0%)
 Frame = +1

Query: 25  VFSTAWNQNPDKDTL-YVCVGPSFSXAKPXEIYAIXNASGPSAGRKVXRLTDGXXXXAFP 201
           + S AW   PD   L YV    SF   KP  +Y    A+G    R V     G      P
Sbjct: 197 IISPAWA--PDGQRLAYV----SFEAKKPV-VYVHTLATGQ---RHVVANFKGSNSA--P 244

Query: 202 SSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXR 381
           +  P G +     T+DG  +     LY++     G      + R+   P  DT  +WS  
Sbjct: 245 TWAPDGQRLAVVLTKDGQSQ-----LYVLNADGSG------LRRMATSPGIDTEPAWSPD 293

Query: 382 GDWVVFXSTR 411
           G+W+ F S R
Sbjct: 294 GEWIYFSSDR 303



to top

>TOLB_RHOPA (Q6NAR1) Protein tolB precursor|
          Length = 444

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           +   RLTD       PS  P G +  F S R G        +YIM        S G   R
Sbjct: 290 KATTRLTDTPAIDTSPSYAPDGSRICFESDRGG-----KPQIYIM------PASGGQAQR 338

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
           ++ G  + +   WS RGD++ F
Sbjct: 339 ISFGDGSYSTPVWSPRGDYIAF 360



to top

>TOLB_BRUSU (Q8FZ07) Protein tolB precursor|
          Length = 443

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P  +P G K V    +D G      N+Y M+          T TRLT     DT  S+S 
Sbjct: 259 PRFSPDGQKVVMSLLQDDGSA----NIYTMD------LRNRTTTRLTSSQAIDTGASYSP 308

Query: 379 RGDWVVFXSTR 411
            G  +VF S R
Sbjct: 309 DGSQIVFTSDR 319



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT-VT 330
           R   RLT         S +P G + VF S R G        LY+M        ++G+   
Sbjct: 289 RTTTRLTSSQAIDTGASYSPDGSQIVFTSDRGG-----RPQLYVMG-------ADGSNPR 336

Query: 331 RLTDGPWTDTHCSWSXRGDWVVF 399
           R++ G  + +   WS RGD + F
Sbjct: 337 RISMGDGSYSTPVWSPRGDLIAF 359



to top

>TOLB_BRUME (Q93TG4) Protein tolB precursor|
          Length = 443

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 24/71 (33%), Positives = 30/71 (42%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P  +P G K V    +D G      N+Y M+          T TRLT     DT  S+S 
Sbjct: 259 PRFSPDGQKVVMSLLQDDGSA----NIYTMD------LRNRTTTRLTSSQAIDTGASYSP 308

Query: 379 RGDWVVFXSTR 411
            G  +VF S R
Sbjct: 309 DGSQIVFTSDR 319



 Score = 28.9 bits (63), Expect = 5.0
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGT-VT 330
           R   RLT         S +P G + VF S R G        LY+M        ++G+   
Sbjct: 289 RTTTRLTSSQAIDTGASYSPDGSQIVFTSDRGG-----RPQLYVMG-------ADGSNPR 336

Query: 331 RLTDGPWTDTHCSWSXRGDWVVF 399
           R++ G  + +   WS RGD + F
Sbjct: 337 RISMGDGSYSTPVWSPRGDLIAF 359



to top

>TOLB_BRAJA (Q89ED5) Protein tolB precursor|
          Length = 454

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R   RLTD       PS +P G +  F S R G        +Y+M  A  G  ++     
Sbjct: 291 RSTTRLTDTPAIDTSPSYSPDGTRICFESDRGG-----RSQIYVM--AAGGGAAQRISFS 343

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
             D   T +   WS RGD++ F
Sbjct: 344 KDDTNATYSTPVWSPRGDYIAF 365



to top

>TOLB_HAEDU (Q7VKU3) Protein tolB precursor|
          Length = 426

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P+ +P G +  F S +DG       N+YI         + GT  +LT     +T  SWS 
Sbjct: 249 PAFSPDGSRLAFASNQDG-----ELNIYI------ANINGGTPIKLTANVGNNTEPSWSP 297

Query: 379 RGDWVVFXSTR 411
            G  + F S R
Sbjct: 298 DGSIIYFTSDR 308



to top

>TOLB_AGRT5 (Q8U9L4) Protein tolB precursor|
          Length = 435

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 23/82 (28%), Positives = 35/82 (42%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R   RLT+       PS +P G +  F S R G      + +Y+M     G+       R
Sbjct: 281 RTTTRLTNTAAIDTAPSYSPDGQRVAFESDRGG-----RQQIYVMNADGSGQ------QR 329

Query: 334 LTDGPWTDTHCSWSXRGDWVVF 399
           ++ G  + +   WS RGD + F
Sbjct: 330 VSFGDGSYSTPVWSPRGDLIAF 351



to top

>TOLB_GEOSL (Q74H67) Protein tolB precursor|
          Length = 432

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 26/88 (29%), Positives = 40/88 (45%)
 Frame = +1

Query: 151 GRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVT 330
           G  V RLT        P  +P GD+ V+   ++GG +     +Y +     G+      T
Sbjct: 324 GSDVRRLTTSGAYNVSPRWSPKGDRLVY-CRQEGGFQ-----IYSIATDGTGD------T 371

Query: 331 RLTDGPWTDTHCSWSXRGDWVVFXSTRE 414
           RLT    ++ H  WS  G ++ F STR+
Sbjct: 372 RLTS-EGSNEHPRWSPDGRFLTFSSTRD 398



 Score = 30.4 bits (67), Expect = 1.7
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
 Frame = +1

Query: 112 EIYAIXNASGPSAGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIME 291
           EIYAI        GR   RLT        P+ +P G +  F S R G  + F  N     
Sbjct: 272 EIYAISRD-----GRDPRRLTTHQAIDVSPAWSPDGKRIAFVSDRLGKPQVFIMN----- 321

Query: 292 DAEVGEFSEGT-VTRLTDGPWTDTHCSWSXRGDWVVF 399
                  ++G+ V RLT     +    WS +GD +V+
Sbjct: 322 -------ADGSDVRRLTTSGAYNVSPRWSPKGDRLVY 351



 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/68 (26%), Positives = 27/68 (39%)
 Frame = +1

Query: 151 GRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVT 330
           G  V RLT        P  +P G +  + S R G  + F + ++   +A V       VT
Sbjct: 192 GHNVQRLTKNRSINLNPDFSPNGRELAYTSYRRGNPDLFRREIFTGTEAVVSSHRGINVT 251

Query: 331 RLTDGPWT 354
               G W+
Sbjct: 252 ----GTWS 255



to top

>TOLB_MYXXA (Q84FF7) Protein tolB precursor (Adventurous gliding motility|
           protein W)
          Length = 431

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 157 KVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIM 288
           KV RLT        P+ +P G   VF STR+GG +     LY+M
Sbjct: 364 KVTRLTQDQGSNEEPAFSPNGRLIVFTSTRNGGSQ-----LYVM 402



 Score = 32.0 bits (71), Expect = 0.59
 Identities = 28/87 (32%), Positives = 38/87 (43%)
 Frame = +1

Query: 151 GRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVT 330
           G  V RLT        P  +P GD  VF + RD       +N + +    V     G VT
Sbjct: 317 GTGVRRLTFQGNYNQTPDWSPRGDLIVF-TARD------ERNAFDLFTVSV---ETGKVT 366

Query: 331 RLTDGPWTDTHCSWSXRGDWVVFXSTR 411
           RLT    ++   ++S  G  +VF STR
Sbjct: 367 RLTQDQGSNEEPAFSPNGRLIVFTSTR 393



 Score = 32.0 bits (71), Expect = 0.59
 Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
 Frame = +1

Query: 88  SFSXAKPXEIYAIXNASGPSAGRKVXRLTDG-XXXXAFPSSNPXGDKFVFRSTRDGGXEK 264
           S +  +  ++Y + NA G  A      LTD        P+ +P G +  F S R G  + 
Sbjct: 256 SLAEGESAQVY-VANADGSGA----RALTDTPYGLNTSPTWSPDGKRIAFVSNRGGSPQ- 309

Query: 265 FHKNLYIMEDAEVGEFSEGT-VTRLT-DGPWTDTHCSWSXRGDWVVFXSTRE 414
               +YIM        ++GT V RLT  G +  T   WS RGD +VF +  E
Sbjct: 310 ----VYIMN-------ADGTGVRRLTFQGNYNQTP-DWSPRGDLIVFTARDE 349



to top

>TOLB_CHLPN (Q9Z7C4) Protein tolB precursor|
          Length = 431

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
 Frame = +1

Query: 136 SGPSAGRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFS 315
           SGP  GR    L +       PS NP G + VF S +DG        LYIM         
Sbjct: 263 SGPM-GRPRRLLNENFGTQGNPSFNPEGSQLVFISNKDG-----RPRLYIM-----SLDP 311

Query: 316 EGTVTRLTDGPWTDTHC-SWSXRGDWVVFXS 405
           E    RL    + ++ C +WS  G  + F S
Sbjct: 312 EPQAPRLLTKKYRNSSCPAWSPDGKKIAFCS 342



to top

>TOLB_YERPS (Q66D90) Protein tolB precursor|
          Length = 430

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSW 372
           P+ +P G K  F  ++ G       NLY+M+       + G ++++TDG   +T  SW
Sbjct: 249 PAFSPDGTKLAFALSKSGSL-----NLYVMD------LASGQISQVTDGRSNNTEPSW 295



to top

>TOLB_YERPE (Q8ZGZ1) Protein tolB precursor|
          Length = 430

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSW 372
           P+ +P G K  F  ++ G       NLY+M+       + G ++++TDG   +T  SW
Sbjct: 249 PAFSPDGTKLAFALSKSGSL-----NLYVMD------LASGQISQVTDGRSNNTEPSW 295



to top

>Y1656_AGRT5 (Q8UEU8) Hypothetical protein ATU1656/AGR_C_3050|
          Length = 293

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = +1

Query: 151 GRKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVT 330
           G  V R+TD      FP  +P GDK VF S  D       ++L +    ++ +   G V 
Sbjct: 204 GSSVERITDSAYGDWFPHPSPSGDKVVFVS-YDADVFDHPRDLDVR--VQLMDMDGGNVE 260

Query: 331 RLTD---GPWTDTHCSWSXRGD 387
            L D   G  T    +WS  GD
Sbjct: 261 TLFDLFGGQGTMNSPNWSPDGD 282



to top

>TOLB_BARHE (Q6G5R6) Protein tolB precursor|
          Length = 443

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/87 (25%), Positives = 33/87 (37%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R + RLT         S +P G K VF S R G  + +  N                + R
Sbjct: 288 RMMTRLTTTSAIDTSASYSPDGTKIVFSSDRSGKPQIYTMNA-----------DGSNLQR 336

Query: 334 LTDGPWTDTHCSWSXRGDWVVFXSTRE 414
           ++    + +   WS RGD++ F    E
Sbjct: 337 ISSNEGSYSTPIWSPRGDYIAFTKQLE 363



to top

>TOLB_CHLCV (Q821G5) Protein tolB precursor|
          Length = 427

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIME-DAEVGEFSEGTVTRLTDGPWTDTHC-SW 372
           PS +P G K VF S RDG        LYI++ D E+         RL    + ++ C SW
Sbjct: 284 PSFSPDGSKLVFVSNRDG-----RPRLYIIQIDPEI------QTPRLLTKKYRNSSCPSW 332

Query: 373 SXRGDWVVFXS 405
           S  G  + F S
Sbjct: 333 SPDGKKIAFCS 343



to top

>TOLB_PSEAE (P50601) Protein tolB precursor|
          Length = 432

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P+ +P G++  F  +RDG  E     +Y+M      +     + RLT+    DT   W  
Sbjct: 248 PAFSPDGNRLAFVLSRDGNPE-----IYVM------DLGSRALRRLTNNLAIDTEPFWGK 296

Query: 379 RGDWVVFXSTR 411
            G  + F S R
Sbjct: 297 DGSTLYFTSDR 307



to top

>TOLB_PHOLL (Q7N6T6) Protein tolB precursor|
          Length = 430

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +1

Query: 199 PSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSX 378
           P+ +P G K  F  ++ G       NLY+M+           + ++TDG   +T  SW  
Sbjct: 249 PAFSPDGSKLAFALSKSGSL-----NLYVMD------LGSAQIRQITDGRSNNTEPSWMP 297

Query: 379 RGDWVVFXS 405
               +V+ S
Sbjct: 298 DNQTLVYTS 306



to top

>TOLB_BARQU (Q6FYQ1) Protein tolB precursor|
          Length = 440

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 21/87 (24%), Positives = 33/87 (37%)
 Frame = +1

Query: 154 RKVXRLTDGXXXXAFPSSNPXGDKFVFRSTRDGGXEKFHKNLYIMEDAEVGEFSEGTVTR 333
           R + RLT         S +P G + VF S R G  + +  N                + R
Sbjct: 285 RMMTRLTTTSAIDTSASYSPDGTQIVFSSDRSGKPQIYTMNA-----------DGSNLQR 333

Query: 334 LTDGPWTDTHCSWSXRGDWVVFXSTRE 414
           ++    + +   WS RGD++ F    E
Sbjct: 334 ISANEGSYSTPIWSPRGDYIAFTKQLE 360



to top

>ITS3_SCHPO (O13853) Phosphatidylinositol-4-phosphate 5-kinase its3 (EC|
           2.7.1.68) (1-phosphatidylinositol-4-phosphate kinase)
           (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide
           kinase)
          Length = 742

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -1

Query: 359 VSVHGPSVSRVTVPSLNSPTSASSM-M*RFLWNFSXPPSLVDRKTNLSP 216
           +SV+ P+VS+  VPS+N   S S++ + R + N + P SL D+  NL P
Sbjct: 531 LSVYDPNVSQHRVPSINGNESHSNVHVIRQVVNSTGPVSL-DQSCNLLP 578



to top

>KI21B_MOUSE (Q9QXL1) Kinesin family member 21B (Kinesin-like protein KIF6)|
          Length = 1668

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 268  HKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSXRGD 387
            H+N Y   D EV EFSEG+ ++      + +H  +  +G+
Sbjct: 1100 HENGYASTDEEVSEFSEGSFSQSFTMKGSTSHDDFKFKGE 1139



to top

>SYE_ARCFU (O29979) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 551

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
 Frame = +1

Query: 232 FRSTRDGGXEKFHKNLYIMEDAEV------GEFSEGTVTRLTDGPWTDTHCSWSXRGDWV 393
           F+  RD G E  H+N+ + +  EV      G++ EG V        TD         DWV
Sbjct: 197 FKKFRDSGEECPHRNISVEDTLEVWERMLEGDYEEGEVVLRIK---TDMRHKDPAIRDWV 253

Query: 394 VFXSTRE 414
            F   +E
Sbjct: 254 AFRIIKE 260



to top

>PYRD_DROME (P32748) Dihydroorotate dehydrogenase, mitochondrial precursor (EC|
           1.3.3.1) (Dihydroorotate oxidase) (DHOdehase)
          Length = 405

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 398 KTTQSPLXDQLQWVSVHGPSVSRVTVPSLNSPTS 297
           KTT SP+ D +Q V V GP V+   V +++SP +
Sbjct: 189 KTTMSPIADYVQGVRVFGP-VADYLVINVSSPNT 221



to top

>ALR_NEIMB (Q9JYC4) Alanine racemase (EC 5.1.1.1)|
          Length = 352

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -1

Query: 167 RCTFRPADGPDALXMA*ISXGLAXEKDGPTHTYSVSLSGFW----FHAVEKTALEP 12
           RC F  AD  D   +A I  G+   + G TH   V L G +    + AVE+ +L P
Sbjct: 43  RCAFALADLADGFAVATIDEGIRLRESGITHPI-VLLEGVFEASEYEAVEQYSLWP 97



to top

>ALR_NEIMA (Q9JTA6) Alanine racemase (EC 5.1.1.1)|
          Length = 352

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -1

Query: 167 RCTFRPADGPDALXMA*ISXGLAXEKDGPTHTYSVSLSGFW----FHAVEKTALEP 12
           RC F  AD  D   +A I  G+   + G TH   V L G +    + AVE+ +L P
Sbjct: 43  RCAFALADLADGFAVATIDEGIRLRESGITHPI-VLLEGVFEASEYEAVEQYSLWP 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.133    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,911,099
Number of Sequences: 219361
Number of extensions: 641799
Number of successful extensions: 1340
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
to top