No.
Definition
Score (bits)
E Value
1 ref|XM_463813.1| Oryza sativa (japonica cultivar-group), mRNA
476
e-131
2 dbj|AK063525.1| Oryza sativa (japonica cultivar-group) cDNA clon...
476
e-131
3 gb|AF135014.1|AF135014 Zea mays dihydrolipoamide S-acetyltransfe...
470
e-129
4 ref|XM_477668.1| Oryza sativa (japonica cultivar-group), mRNA
464
e-127
5 dbj|AK070846.1| Oryza sativa (japonica cultivar-group) cDNA clon...
464
e-127
6 gb|AY109496.1| Zea mays CL1480_1 mRNA sequence
448
e-123
7 ref|XM_550447.1| Oryza sativa (japonica cultivar-group), mRNA
297
2e-77
8 dbj|AK071985.1| Oryza sativa (japonica cultivar-group) cDNA clon...
297
2e-77
9 ref|XM_550448.1| Oryza sativa (japonica cultivar-group), mRNA
234
2e-58
10 dbj|AK103793.1| Oryza sativa (japonica cultivar-group) cDNA clon...
234
2e-58
11 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
147
4e-32
12 dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D...
147
4e-32
13 dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic D...
147
4e-32
14 dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic D...
147
4e-32
15 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
107
4e-20
16 dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D...
107
4e-20
17 dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic D...
107
4e-20
18 gb|AY111798.1| Zea mays CL1480_2 mRNA sequence
103
6e-19
19 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
74
5e-10
20 dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D...
74
5e-10
21 ref|NM_112247.2| Arabidopsis thaliana acyltransferase/ dihydroli...
58
3e-05
22 gb|BT000702.1| Arabidopsis thaliana clone RAFL07-10-F16 (R10941)...
58
3e-05
23 gb|BT000444.1| Arabidopsis thaliana putative acetyltransferase (...
58
3e-05
24 gb|AY092968.1| Arabidopsis thaliana dihydrolipoamide acetyltrans...
58
3e-05
25 gb|AY091691.1| Arabidopsis thaliana AT3g13930/MDC16_5 mRNA, comp...
58
3e-05
26 gb|AF367302.1| Arabidopsis thaliana AT3g13930/MDC16_5 mRNA, comp...
58
3e-05
27 gb|BT001223.1| Arabidopsis thaliana putative acetyltransferase (...
58
3e-05
28 ref|NM_104300.2| Arabidopsis thaliana acyltransferase/ dihydroli...
56
1e-04
29 ref|NM_001036109.1| Arabidopsis thaliana acyltransferase/ dihydr...
56
1e-04
30 gb|BT020419.1| Arabidopsis thaliana At1g54220 mRNA, complete cds
56
1e-04
31 gb|AY033001.1| Arabidopsis thaliana mono-lipoyl E2 mRNA, complet...
56
1e-04
32 gb|AY136410.1| Arabidopsis thaliana dihydrolipoamide S-acetyltra...
48
0.028
33 dbj|AB019229.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
46
0.11
34 gb|AY302494.1| Cryptococcus neoformans var. grubii thiol-specifi...
42
1.8
35 gb|AC126125.6| Rattus norvegicus 14 BAC CH230-25F8 (Children's H...
40
6.9
36 emb|CR456631.7| Zebrafish DNA sequence from clone DKEY-101N15 in...
40
6.9
37 gb|AC005014.2| Homo sapiens BAC clone GS1-166A23 from 7, complet...
40
6.9
38 gb|AC140032.4| Medicago truncatula clone mth2-10i23, complete se...
40
6.9
39 emb|AL035088.1|HS3D11 Human DNA sequence from clone RP1-3D11 on ...
40
6.9
40 emb|X07974.1|OAMTIC Sheep metallothionein MT-Ic gene
40
6.9
41 ref|NM_060923.1| Caenorhabditis elegans ZK1053.3 (ZK1053.3) mRNA...
40
6.9
42 gb|AC090523.1|AC090523 Caenorhabditis briggsae cosmid CB015N01, ...
40
6.9
43 gb|AC092651.3| Homo sapiens BAC clone RP11-431O23 from 2, comple...
40
6.9
44 gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complet...
40
6.9
45 gb|AC064848.5| Homo sapiens BAC clone RP11-81F3 from 2, complete...
40
6.9
46 emb|Z82084.1|CEZK1053 Caenorhabditis elegans Cosmid ZK1053, comp...
40
6.9
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
complete sequence
Length = 35954743
Score = 147 bits (74), Expect = 4e-32
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 292569 ggatgcagacaagaagggacttggtacaattgctgaggaggtgaagcaggtggctcaaag 292628
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 292629 agcaagggataacagcttaaaacctgaagattatgagg 292666
Score = 87.7 bits (44), Expect = 3e-14
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 292430 ataccacaacgtgaacatcaatgttgctgtacagactgagcatgggttgtttgttccagt 292489
Query: 361 agttaggg 368
| ||||||
Sbjct: 292490 aattaggg 292497
Score = 75.8 bits (38), Expect = 1e-10
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || ||||||| |||||
Sbjct: 292278 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcgtggatgagtgatt 292337
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 292338 ttatccgcca 292347
Score = 73.8 bits (37), Expect = 5e-10
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| || |||| || ||||||| || |||||||||||||||||
Sbjct: 292067 gttgcgaggggaactgaatccgttgcaagagtcatctggcggtaagaagatatctattaa 292126
Query: 217 cgaccttgttataaagg 233
||| |||||||||||||
Sbjct: 292127 cgatcttgttataaagg 292143
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||| ||||| || || |||||||||||| || || ||||| ||||||||||
Sbjct: 291851 aggttactgcaaaccgcctgctaagctctaaacaaactattcctcattattacttgacag 291910
Query: 129 ttgacacacgcgtcgacaaacttatcaagt 158
||||| | || || || || ||||||||||
Sbjct: 291911 ttgacgcccgtgttgataatcttatcaagt 291940
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||||||| |||| ||| | ||||||||||||||
Sbjct: 291733 ttacactgatgttcctaatactcagataagaaaggt 291768
>dbj|AP004851.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1359_D06
Length = 146805
Score = 147 bits (74), Expect = 4e-32
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 21353 ggatgcagacaagaagggacttggtacaattgctgaggaggtgaagcaggtggctcaaag 21412
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 21413 agcaagggataacagcttaaaacctgaagattatgagg 21450
Score = 87.7 bits (44), Expect = 3e-14
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 21214 ataccacaacgtgaacatcaatgttgctgtacagactgagcatgggttgtttgttccagt 21273
Query: 361 agttaggg 368
| ||||||
Sbjct: 21274 aattaggg 21281
Score = 75.8 bits (38), Expect = 1e-10
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || ||||||| |||||
Sbjct: 21062 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcgtggatgagtgatt 21121
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 21122 ttatccgcca 21131
Score = 73.8 bits (37), Expect = 5e-10
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| || |||| || ||||||| || |||||||||||||||||
Sbjct: 20851 gttgcgaggggaactgaatccgttgcaagagtcatctggcggtaagaagatatctattaa 20910
Query: 217 cgaccttgttataaagg 233
||| |||||||||||||
Sbjct: 20911 cgatcttgttataaagg 20927
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||| ||||| || || |||||||||||| || || ||||| ||||||||||
Sbjct: 20635 aggttactgcaaaccgcctgctaagctctaaacaaactattcctcattattacttgacag 20694
Query: 129 ttgacacacgcgtcgacaaacttatcaagt 158
||||| | || || || || ||||||||||
Sbjct: 20695 ttgacgcccgtgttgataatcttatcaagt 20724
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||||||| |||| ||| | ||||||||||||||
Sbjct: 20517 ttacactgatgttcctaatactcagataagaaaggt 20552
>dbj|AP004049.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1212_C06
Length = 110989
Score = 147 bits (74), Expect = 4e-32
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 102544 ggatgcagacaagaagggacttggtacaattgctgaggaggtgaagcaggtggctcaaag 102603
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 102604 agcaagggataacagcttaaaacctgaagattatgagg 102641
Score = 87.7 bits (44), Expect = 3e-14
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 102405 ataccacaacgtgaacatcaatgttgctgtacagactgagcatgggttgtttgttccagt 102464
Query: 361 agttaggg 368
| ||||||
Sbjct: 102465 aattaggg 102472
Score = 75.8 bits (38), Expect = 1e-10
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || ||||||| |||||
Sbjct: 102253 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcgtggatgagtgatt 102312
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 102313 ttatccgcca 102322
Score = 73.8 bits (37), Expect = 5e-10
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| || |||| || ||||||| || |||||||||||||||||
Sbjct: 102042 gttgcgaggggaactgaatccgttgcaagagtcatctggcggtaagaagatatctattaa 102101
Query: 217 cgaccttgttataaagg 233
||| |||||||||||||
Sbjct: 102102 cgatcttgttataaagg 102118
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||| ||||| || || |||||||||||| || || ||||| ||||||||||
Sbjct: 101826 aggttactgcaaaccgcctgctaagctctaaacaaactattcctcattattacttgacag 101885
Query: 129 ttgacacacgcgtcgacaaacttatcaagt 158
||||| | || || || || ||||||||||
Sbjct: 101886 ttgacgcccgtgttgataatcttatcaagt 101915
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||||||| |||| ||| | ||||||||||||||
Sbjct: 101708 ttacactgatgttcctaatactcagataagaaaggt 101743
>dbj|AP006720.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
clone:OJA1212_C06
Length = 113554
Score = 147 bits (74), Expect = 4e-32
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||
Sbjct: 105109 ggatgcagacaagaagggacttggtacaattgctgaggaggtgaagcaggtggctcaaag 105168
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 105169 agcaagggataacagcttaaaacctgaagattatgagg 105206
Score = 87.7 bits (44), Expect = 3e-14
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 104970 ataccacaacgtgaacatcaatgttgctgtacagactgagcatgggttgtttgttccagt 105029
Query: 361 agttaggg 368
| ||||||
Sbjct: 105030 aattaggg 105037
Score = 75.8 bits (38), Expect = 1e-10
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || ||||||| |||||
Sbjct: 104818 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcgtggatgagtgatt 104877
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 104878 ttatccgcca 104887
Score = 73.8 bits (37), Expect = 5e-10
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| || |||| || ||||||| || |||||||||||||||||
Sbjct: 104607 gttgcgaggggaactgaatccgttgcaagagtcatctggcggtaagaagatatctattaa 104666
Query: 217 cgaccttgttataaagg 233
||| |||||||||||||
Sbjct: 104667 cgatcttgttataaagg 104683
Score = 52.0 bits (26), Expect = 0.002
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||| ||||| || || |||||||||||| || || ||||| ||||||||||
Sbjct: 104391 aggttactgcaaaccgcctgctaagctctaaacaaactattcctcattattacttgacag 104450
Query: 129 ttgacacacgcgtcgacaaacttatcaagt 158
||||| | || || || || ||||||||||
Sbjct: 104451 ttgacgcccgtgttgataatcttatcaagt 104480
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||||||| |||| ||| | ||||||||||||||
Sbjct: 104273 ttacactgatgttcctaatactcagataagaaaggt 104308
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 107 bits (54), Expect = 4e-20
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||
Sbjct: 12759475 ggatgcagacaagaaaggacttggtatgattgcggaggaggtgaagcagttggctcaaag 12759416
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
||||||||||||||| || |||||| | ||||| ||||
Sbjct: 12759415 agcaagggataacagtttgaaaccagatgattatgagg 12759378
Score = 83.8 bits (42), Expect = 5e-13
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 12759751 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcctggatgaatgatt 12759692
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 12759691 ttatccgcca 12759682
Score = 81.8 bits (41), Expect = 2e-12
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 12759603 ataccacaacgtgaacatcaatgttgctgtacagactgagcatggactgtttgttccagt 12759544
Query: 361 a 361
|
Sbjct: 12759543 a 12759543
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| ||| ||||||| | || ||||| |||||||||||||||||
Sbjct: 12759973 gttgcgaggggaactgaatccattgcaggagtcctccggtggtaagaagatatctattaa 12759914
Query: 217 cgaccttgttataaagg 233
|| || ||||||||||
Sbjct: 12759913 tgatctagttataaagg 12759897
Score = 65.9 bits (33), Expect = 1e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 462 agggtggcacgttcacagtatcaaacttgggaggnccttttggaattaagca 513
|||| ||||| ||||| |||||||||||||||| |||||||||||||||||
Sbjct: 12759301 agggaggcacattcaccatatcaaacttgggaggtccttttggaattaagca 12759250
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||||||||| || || |||||| ||||| || || ||||| ||| ||||||
Sbjct: 12760199 aggttactgcgaaccgcctgctaagctctaagcaaacaattccacattattacctgacag 12760140
Query: 129 ttgacacacg 138
||||||||||
Sbjct: 12760139 ttgacacacg 12760130
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||| ||| |||| |||||||| |||||||||||
Sbjct: 12760318 ttacaccgatgttcccaatgcacaaataagaaaggt 12760283
>dbj|AP005325.5 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0710F09
Length = 198867
Score = 107 bits (54), Expect = 4e-20
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||
Sbjct: 17599 ggatgcagacaagaaaggacttggtatgattgcggaggaggtgaagcagttggctcaaag 17540
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
||||||||||||||| || |||||| | ||||| ||||
Sbjct: 17539 agcaagggataacagtttgaaaccagatgattatgagg 17502
Score = 83.8 bits (42), Expect = 5e-13
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 17875 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcctggatgaatgatt 17816
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 17815 ttatccgcca 17806
Score = 81.8 bits (41), Expect = 2e-12
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 17727 ataccacaacgtgaacatcaatgttgctgtacagactgagcatggactgtttgttccagt 17668
Query: 361 a 361
|
Sbjct: 17667 a 17667
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| ||| ||||||| | || ||||| |||||||||||||||||
Sbjct: 18097 gttgcgaggggaactgaatccattgcaggagtcctccggtggtaagaagatatctattaa 18038
Query: 217 cgaccttgttataaagg 233
|| || ||||||||||
Sbjct: 18037 tgatctagttataaagg 18021
Score = 65.9 bits (33), Expect = 1e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 462 agggtggcacgttcacagtatcaaacttgggaggnccttttggaattaagca 513
|||| ||||| ||||| |||||||||||||||| |||||||||||||||||
Sbjct: 17425 agggaggcacattcaccatatcaaacttgggaggtccttttggaattaagca 17374
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||||||||| || || |||||| ||||| || || ||||| ||| ||||||
Sbjct: 18323 aggttactgcgaaccgcctgctaagctctaagcaaacaattccacattattacctgacag 18264
Query: 129 ttgacacacg 138
||||||||||
Sbjct: 18263 ttgacacacg 18254
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||| ||| |||| |||||||| |||||||||||
Sbjct: 18442 ttacaccgatgttcccaatgcacaaataagaaaggt 18407
>dbj|AP004305.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0492E07
Length = 143794
Score = 107 bits (54), Expect = 4e-20
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||
Sbjct: 133945 ggatgcagacaagaaaggacttggtatgattgcggaggaggtgaagcagttggctcaaag 133886
Query: 427 agcaagggataacagcttaaaaccacaagattacgagg 464
||||||||||||||| || |||||| | ||||| ||||
Sbjct: 133885 agcaagggataacagtttgaaaccagatgattatgagg 133848
Score = 83.8 bits (42), Expect = 5e-13
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||||||||| ||||||||||||||||||||||||| || || || |||||||||||||
Sbjct: 134221 aggctgcagctctggctcttcgaaaggtccctcagtgtaatagctcctggatgaatgatt 134162
Query: 291 ttattcgcca 300
|||| |||||
Sbjct: 134161 ttatccgcca 134152
Score = 81.8 bits (41), Expect = 2e-12
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttccagt 360
|||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 134073 ataccacaacgtgaacatcaatgttgctgtacagactgagcatggactgtttgttccagt 134014
Query: 361 a 361
|
Sbjct: 134013 a 134013
Score = 65.9 bits (33), Expect = 1e-07
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||||||||| |||| ||| ||||||| | || ||||| |||||||||||||||||
Sbjct: 134443 gttgcgaggggaactgaatccattgcaggagtcctccggtggtaagaagatatctattaa 134384
Query: 217 cgaccttgttataaagg 233
|| || ||||||||||
Sbjct: 134383 tgatctagttataaagg 134367
Score = 65.9 bits (33), Expect = 1e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 462 agggtggcacgttcacagtatcaaacttgggaggnccttttggaattaagca 513
|||| ||||| ||||| |||||||||||||||| |||||||||||||||||
Sbjct: 133771 agggaggcacattcaccatatcaaacttgggaggtccttttggaattaagca 133720
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 69 aggttactgcgaaccgtctcttagcctctaaacaaaccatcccgcattactacttgacag 128
|||||||||||||||| || || |||||| ||||| || || ||||| ||| ||||||
Sbjct: 134669 aggttactgcgaaccgcctgctaagctctaagcaaacaattccacattattacctgacag 134610
Query: 129 ttgacacacg 138
||||||||||
Sbjct: 134609 ttgacacacg 134600
Score = 40.1 bits (20), Expect = 6.9
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 37 ttacactgatattccaaatgcacagataagaaaggt 72
|||||| ||| |||| |||||||| |||||||||||
Sbjct: 134788 ttacaccgatgttcccaatgcacaaataagaaaggt 134753
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
complete sequence
Length = 30731886
Score = 73.8 bits (37), Expect = 5e-10
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 462 agggtggcacgttcacagtatcaaacttgggaggnccttttggaattaagca 513
|||||||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 369993 agggtggcactttcactgtgtcaaacttgggaggcccttttggaattaagca 369942
Score = 67.9 bits (34), Expect = 3e-08
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||| ||||| ||||||||||| || || ||| |||| || || ||||||||||||||||
Sbjct: 370448 aggccgcagcattggctcttcgtaatgttcctgagtgtaatagctcttggatgaatgatt 370389
Query: 291 ttattcgcca 300
||||||||||
Sbjct: 370388 ttattcgcca 370379
Score = 56.0 bits (28), Expect = 1e-04
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||| ||||||||||| || | || |||| ||| ||||||||||| ||||||| ||
Sbjct: 370157 ggatgctgacaagaagggcctagccactatcgctgatgaggtgaagcaactggctcagag 370098
Query: 427 agcaagggataacagc 442
||||||||| ||||||
Sbjct: 370097 agcaagggacaacagc 370082
Score = 50.1 bits (25), Expect = 0.007
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttcc 357
|||| |||| || ||||| ||||| |||||||| |||||| |||| |||||||||||
Sbjct: 370293 ataccacaatgtgaacatcaatgttgctgtacaaactgaggatggcttgtttgttcc 370237
Score = 42.1 bits (21), Expect = 1.8
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||| | || ||||| || |||||||| | |||||||| ||||||||||| || ||
Sbjct: 370681 gttgcgaagtgagttgaatcctctgcaggatacctctggtggcaagaagatatccataaa 370622
Query: 217 cgaccttgttataaagg 233
|| |||||||| ||||
Sbjct: 370621 tgatcttgttatcaagg 370605
>dbj|AP001129.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0644B06
Length = 194509
Score = 73.8 bits (37), Expect = 5e-10
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 462 agggtggcacgttcacagtatcaaacttgggaggnccttttggaattaagca 513
|||||||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 79946 agggtggcactttcactgtgtcaaacttgggaggcccttttggaattaagca 79895
Score = 67.9 bits (34), Expect = 3e-08
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 231 aggctgcagccttggctcttcgaaaggtccctcagtgcaacagttcttggatgaatgatt 290
|||| ||||| ||||||||||| || || ||| |||| || || ||||||||||||||||
Sbjct: 80401 aggccgcagcattggctcttcgtaatgttcctgagtgtaatagctcttggatgaatgatt 80342
Query: 291 ttattcgcca 300
||||||||||
Sbjct: 80341 ttattcgcca 80332
Score = 56.0 bits (28), Expect = 1e-04
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 367 ggatgcagacaagaagggacttggtacaatcggtgaggaggtgaagcagttggctcaaag 426
|||||| ||||||||||| || | || |||| ||| ||||||||||| ||||||| ||
Sbjct: 80110 ggatgctgacaagaagggcctagccactatcgctgatgaggtgaagcaactggctcagag 80051
Query: 427 agcaagggataacagc 442
||||||||| ||||||
Sbjct: 80050 agcaagggacaacagc 80035
Score = 50.1 bits (25), Expect = 0.007
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 301 atacaacaacgttaacataaatgtagctgtacagactgagcatggattgtttgttcc 357
|||| |||| || ||||| ||||| |||||||| |||||| |||| |||||||||||
Sbjct: 80246 ataccacaatgtgaacatcaatgttgctgtacaaactgaggatggcttgtttgttcc 80190
Score = 42.1 bits (21), Expect = 1.8
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 157 gttgcgaggggaattgaacccactgcaggaagcatctggtggaaagaagatatctattaa 216
||||||| | || ||||| || |||||||| | |||||||| ||||||||||| || ||
Sbjct: 80634 gttgcgaagtgagttgaatcctctgcaggatacctctggtggcaagaagatatccataaa 80575
Query: 217 cgaccttgttataaagg 233
|| |||||||| ||||
Sbjct: 80574 tgatcttgttatcaagg 80558
>emb|Z82084.1 |CEZK1053 Caenorhabditis elegans Cosmid ZK1053, complete sequence
Length = 22106
Score = 40.1 bits (20), Expect = 6.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 440 agcttaaaaccacaagatta 459
||||||||||||||||||||
Sbjct: 19993 agcttaaaaccacaagatta 20012
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,495,093
Number of Sequences: 3902068
Number of extensions: 4495093
Number of successful extensions: 83715
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83531
Number of HSP's gapped (non-prelim): 177
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)