Clone Name	bags5j18
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA,...	309	3e-81
2	emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1	307	1e-80
3	gb|AF107027.1|AF107027 Triticum aestivum histone H1 WH1A.4 mRNA,...	305	5e-80
4	gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA,...	295	5e-77
5	gb|AF107026.1|AF107026 Triticum aestivum histone H1 WH1A.3 mRNA,...	264	2e-67
6	gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 m...	228	1e-56
7	dbj|D87065.1| Triticum aestivum gene for histone H1, complete cd...	210	2e-51
8	dbj|D87064.1| Triticum aestivum gene for histone H1, complete cd...	163	5e-37
9	gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA,...	119	7e-24
10	ref|NM_185048.1| Oryza sativa (japonica cultivar-group), mRNA	84	4e-13
11	dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clon...	84	4e-13
12	dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clon...	84	4e-13
13	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	78	2e-11
14	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	78	2e-11
15	gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genom...	78	2e-11
16	gb|BT016422.1| Zea mays clone Contig255 mRNA sequence	62	1e-06
17	gb|AF394122.1|AF394122 Fritillaria liliacea clone 1GB-6 histone-...	46	0.079
18	gb|AF394120.1|AF394120 Fritillaria liliacea clone 1GB-4 histone-...	46	0.079
19	gb|AF394117.1|AF394117 Fritillaria liliacea clone 1GB-1 histone-...	46	0.079
20	gb|BT016684.1| Zea mays clone Contig517 mRNA sequence	44	0.31
21	ref|NM_136582.2| Drosophila melanogaster CG8235-RA (CG8235), mRNA	44	0.31
22	gb|AY071480.1| Drosophila melanogaster RE55091 full length cDNA	44	0.31
23	gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, r...	44	0.31
24	emb|X57077.1|ZMH1HIS Maize H1 mRNA for H1 histone	44	0.31
25	gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15...	44	0.31
26	gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, r...	44	0.31
27	gb|BT018112.1| Zea mays clone EL01N0553G06.c mRNA sequence	42	1.2
28	gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome	42	1.2
29	dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp...	42	1.2
30	gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome	42	1.2
31	dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ...	42	1.2
32	gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the ...	42	1.2
33	ref|NM_197805.1| Oryza sativa (japonica cultivar-group) hypothet...	40	4.9
34	gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence	40	4.9
35	gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge...	40	4.9
36	emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ...	40	4.9
37	emb|CR555306.1| Azoarcus sp. EbN1 complete genome	40	4.9
38	emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene	40	4.9
39	gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp...	40	4.9
40	dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c...	40	4.9
41	gb|AE012494.1| Xanthomonas campestris pv. campestris str. ATCC 3...	40	4.9
42	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	40	4.9
43	gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen...	40	4.9
44	gb|AF394115.1|AF394115 Fritillaria liliacea clone 1GA-4 histone-...	40	4.9
45	gb|AF394114.1|AF394114 Fritillaria liliacea clone 1GA-3 histone-...	40	4.9
46	gb|AF394113.1|AF394113 Fritillaria liliacea clone 1GA-2 histone-...	40	4.9
47	gb|AF394112.1|AF394112 Fritillaria liliacea clone 1GA-1 histone-...	40	4.9
48	gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...	40	4.9
49	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	4.9
50	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	40	4.9
51	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	40	4.9
52	gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome	40	4.9
53	gb|AE004581.1| Pseudomonas aeruginosa PAO1, section 142 of 529 o...	40	4.9
54	dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic D...	40	4.9
55	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	40	4.9
56	dbj|AB012694.1| Lilium longiflorum p35 mRNA for variant of histo...	40	4.9
57	dbj|AK072336.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	4.9
58	gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete...	40	4.9
59	gb|DQ125333.1| Sapovirus Hu/Angelholm/SW278/2004/SE polyprotein ...	40	4.9
60	gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com...	40	4.9
61	gb|U82763.1|XCU82763 Xanthomonas campestris pv. campestris prima...	40	4.9
62	gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome	40	4.9
63	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	40	4.9
64	gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, comple...	40	4.9

---

>gb|AF107023.1|AF107023 Triticum aestivum histone H1 WH1A.2 mRNA, complete cds
          Length = 1019

 Score =  309 bits (156), Expect = 3e-81
 Identities = 264/301 (87%), Gaps = 16/301 (5%)
 Strand = Plus / Plus

                                                                       
Query: 82  gacatcccggtgccccaggtggaggcgaccgccgaccccgtcgtctgacacgccggcggc 141
           |||||||||||||| ||||||||||   |||||||| ||| ||| |||||| ||||||||
Sbjct: 60  gacatcccggtgcctcaggtggaggtagccgccgacgccgccgt-tgacacaccggcggc 118

                                                                       
Query: 142 gaagccggccaaggcgcccaaggc---------caagaagtccactggcccgaagaagcc 192
           ||||||||||||||||||||||||         |||||||||||||||||||||||||||
Sbjct: 119 gaagccggccaaggcgcccaaggcggccaaggccaagaagtccactggcccgaagaagcc 178

                                                                       
Query: 193 c------accgcgtnccacccctcctacgccgagatggtgtcggaggccatcgccgccct 246
           |      ||| ||  |||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 179 ccgcgtcaccccggcccacccgtcctacgccgagatggtgtcggaggcgatcgccgccct 238

                                                                       
Query: 247 gaaggaaagaggcgggtcgagcaccgtcgcgatcggcaagttcntcgaggagaagcacaa 306
           |||||| ||  |||||||||||||| ||||||||||||||||| ||||||| ||||||||
Sbjct: 239 gaaggagaggagcgggtcgagcaccatcgcgatcggcaagttcatcgaggataagcacaa 298

                                                                       
Query: 307 ggcgcacctcccggccaatttccgcaagatgctgctgacgcagatcaagaagctcgtcgc 366
           |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 299 ggcgcacctcccggccaacttccgcaagatcctgctgacccagatcaagaagctcgtcgc 358

            
Query: 367 c 367
           |
Sbjct: 359 c 359

---

>emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1
          Length = 1031

 Score =  307 bits (155), Expect = 1e-80
 Identities = 283/326 (86%), Gaps = 19/326 (5%)
 Strand = Plus / Plus

                                                                       
Query: 60  aatgtcgaccgacgtggttgccg---acatcccggtgccccaggtggaggcgaccgccga 116
           ||||||||| ||||||| |||||   ||||||||||||| ||||||||||   |||||||
Sbjct: 69  aatgtcgactgacgtggctgccgctgacatcccggtgcctcaggtggaggtagccgccga 128

                                                                       
Query: 117 ccccgtcgtctgacacgccggcggcgaagccggccaaggcgcccaaggc---------ca 167
           | | | ||| |||||| ||||||||||||||||||||||||||||||||         ||
Sbjct: 129 cgctgccgt-tgacacaccggcggcgaagccggccaaggcgcccaaggcggccaaggcca 187

                                                                       
Query: 168 agaagtccactggcccgaagaagccc------accgcgtnccacccctcctacgccgaga 221
           ||||||||||||||||||||||||||      ||| ||  |||||| |||||||||||||
Sbjct: 188 agaagtccactggcccgaagaagccccgcgtcaccccggcccacccgtcctacgccgaga 247

                                                                       
Query: 222 tggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcaccgtcgcgatcg 281
           ||||||||||||| ||||||||||||||||| ||  |||||||||||||| |||||||||
Sbjct: 248 tggtgtcggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcg 307

                                                                       
Query: 282 gcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaagatgctgc 341
           |||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 308 gcaagttcatcgaggacaagcacaaggcgcacctcccggccaacttccgcaagatcctgc 367

                                     
Query: 342 tgacgcagatcaagaagctcgtcgcc 367
           |||| |||||||||||||||||||||
Sbjct: 368 tgacccagatcaagaagctcgtcgcc 393

---

>gb|AF107027.1|AF107027 Triticum aestivum histone H1 WH1A.4 mRNA, complete cds
          Length = 975

 Score =  305 bits (154), Expect = 5e-80
 Identities = 288/333 (86%), Gaps = 19/333 (5%)
 Strand = Plus / Plus

                                                                       
Query: 53  tagctgcaatgtcgaccgacgtggttgccg---acatcccggtgccccaggtggaggcga 109
           |||||||||||||||| || |||| ||| |   ||||||||||||| ||||||||||   
Sbjct: 19  tagctgcaatgtcgactgaagtggctgctgctgacatcccggtgcctcaggtggaggtag 78

                                                                       
Query: 110 ccgccgaccccgtcgtctgacacgccggcggcgaagccggccaaggcgcccaaggc---- 165
           |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
Sbjct: 79  ccgccgacgccgccgt-tgacacgccggcggcgaagccggccaaggcgcccaaggcggcc 137

                                                                       
Query: 166 -----caagaagtccactggcccgaagaagccc------accgcgtnccacccctcctac 214
                ||||||||||||||||||||||||||||      ||| ||  |||||| ||||||
Sbjct: 138 aaggccaagaagtccactggcccgaagaagccccgcgtcaccccggcccacccgtcctac 197

                                                                       
Query: 215 gccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcaccgtc 274
           |||||||||||||||||||| ||||||||||||||||| ||  |||||||||||||| ||
Sbjct: 198 gccgagatggtgtcggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatc 257

                                                                       
Query: 275 gcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaag 334
           ||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||
Sbjct: 258 gcgatcggcaagttcatcgaggacaagcacgaggcgcacctcccggccaacttccgcaag 317

                                            
Query: 335 atgctgctgacgcagatcaagaagctcgtcgcc 367
           || ||||| || |||||||||||||||||||||
Sbjct: 318 atcctgctcacccagatcaagaagctcgtcgcc 350

---

>gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA, complete cds
          Length = 1050

 Score =  295 bits (149), Expect = 5e-77
 Identities = 280/323 (86%), Gaps = 16/323 (4%)
 Strand = Plus / Plus

                                                                       
Query: 60  aatgtcgaccgacgtggttgccg---acatcccggtgccccaggtggaggcgaccgccga 116
           ||||||||| ||||||| |||||   ||||||||||||| ||||||||||   |||||||
Sbjct: 46  aatgtcgactgacgtggctgccgctgacatcccggtgcctcaggtggaggtagccgccga 105

                                                                       
Query: 117 ccccgtcgtctgacacgccggcggcgaa------gccggccaaggcgcccaaggccaaga 170
           | | | ||| |||||| |||||||||||      | || |||||||| ||||||||||||
Sbjct: 106 cgctgccgt-tgacacaccggcggcgaacgccaaggcgcccaaggcggccaaggccaaga 164

                                                                       
Query: 171 agtccactggcccgaagaagccc------accgcgtnccacccctcctacgccgagatgg 224
           |||||||||||||||||||||||      ||| ||  |||||| ||||||||||||||||
Sbjct: 165 agtccactggcccgaagaagccccgcgtcaccccggcccacccgtcctacgccgagatgg 224

                                                                       
Query: 225 tgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcaccgtcgcgatcggca 284
           |||||||||| ||||||||||||||||| ||  |||||||||||||| ||||||||||||
Sbjct: 225 tgtcggaggcgatcgccgccctgaaggagaggagcgggtcgagcaccatcgcgatcggca 284

                                                                       
Query: 285 agttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaagatgctgctga 344
           ||||| ||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 285 agttcatcgaggacaagcacaaggcgcacctcccggccaacttccgcaagatcctgctga 344

                                  
Query: 345 cgcagatcaagaagctcgtcgcc 367
           | |||||||||||||||||||||
Sbjct: 345 cccagatcaagaagctcgtcgcc 367

---

>gb|AF107026.1|AF107026 Triticum aestivum histone H1 WH1A.3 mRNA, partial cds
          Length = 952

 Score =  264 bits (133), Expect = 2e-67
 Identities = 253/293 (86%), Gaps = 13/293 (4%)
 Strand = Plus / Plus

                                                                       
Query: 87  cccggtgccccaggtggaggcgaccgccgaccccgtcgtctgacacgccggcggcga--- 143
           ||||||||| ||||||||||   |||||||| ||| ||| ||||||||||||||| |   
Sbjct: 1   cccggtgcctcaggtggaggtagccgccgacgccgccgt-tgacacgccggcggcaagcg 59

                                                                       
Query: 144 ---agccggccaaggcgcccaaggccaagaagtccactggcccgaagaagccc------a 194
              || || |||||||| |||||||||||||||||||||||||||||||||||      |
Sbjct: 60  ccaaggcgcccaaggcggccaaggccaagaagtccactggcccgaagaagccccgcgtca 119

                                                                       
Query: 195 ccgcgtnccacccctcctacgccgagatggtgtcggaggccatcgccgccctgaaggaaa 254
           || ||  |||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 120 ccccggcccacccgtcctacgccgagatggtgtcggaggcgatcgccgccctgaaggaga 179

                                                                       
Query: 255 gaggcgggtcgagcaccgtcgcgatcggcaagttcntcgaggagaagcacaaggcgcacc 314
           |  |||||||||||||| |||||||||  |||||| ||||||| ||||||||||||||||
Sbjct: 180 ggagcgggtcgagcaccatcgcgatcgcaaagttcatcgaggacaagcacaaggcgcacc 239

                                                                
Query: 315 tcccggccaatttccgcaagatgctgctgacgcagatcaagaagctcgtcgcc 367
           |||||||||| ||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 240 tcccggccaacttccgcaagatcctgctcacccagatcaagaagctcgtcgcc 292

---

>gb|AF107025.1|AF107025 Triticum aestivum similar to histone H1 mRNA sequence
          Length = 1082

 Score =  228 bits (115), Expect = 1e-56
 Identities = 147/158 (93%)
 Strand = Plus / Plus

                                                                       
Query: 210 cctacgccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagca 269
           ||||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 87  cctacgctgagatggtggcggaggcgatcgccgccctgaaggagagaggcgggtcgagca 146

                                                                       
Query: 270 ccgtcgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttcc 329
           ||||||| |||| ||||| | ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 147 ccgtcgccatcgccaagtacatcgaggacaagcacaaggcgcacctcccggccaacttcc 206

                                                 
Query: 330 gcaagatgctgctgacgcagatcaagaagctcgtcgcc 367
           ||||||| ||||||||||||||||||||||||||||||
Sbjct: 207 gcaagatcctgctgacgcagatcaagaagctcgtcgcc 244

---

>dbj|D87065.1| Triticum aestivum gene for histone H1, complete cds, clone:TH325
          Length = 2541

 Score =  210 bits (106), Expect = 2e-51
 Identities = 138/149 (92%)
 Strand = Plus / Plus

                                                                        
Query: 219  agatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcaccgtcgcga 278
            |||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| || |
Sbjct: 1191 agatggtgtcggaggcgatcaccgcgctgaaggagagaggcgggtcgagcaccgtggcca 1250

                                                                        
Query: 279  tcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaagatgc 338
            ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||  
Sbjct: 1251 tcggcaagttcatcgaggacaagcacaaggcgcacctcccggccaacttccgcaagatca 1310

                                         
Query: 339  tgctgacgcagatcaagaagctcgtcgcc 367
            |||||||||||||||||||||||||||||
Sbjct: 1311 tgctgacgcagatcaagaagctcgtcgcc 1339



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                         
Query: 79  gccgacatcccggtgccccaggtggaggcgaccgccgaccccgtcg 124
           ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 871 gccgacatcccggtgcctcaggtggaggcgaccgccgaccccgtcg 916



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 140 gcgaagccggccaaggcgcccaaggccaag 169
           |||||||||||||||||| |||||||||||
Sbjct: 946 gcgaagccggccaaggcgaccaaggccaag 975



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 150  ccaaggcgcccaaggccaagaagtccactggcccgaagaagccca 194
            |||||||||||||||| |||||| || | | ||||| ||||||||
Sbjct: 989  ccaaggcgcccaaggcgaagaagccctccgccccgaggaagccca 1033

---

>dbj|D87064.1| Triticum aestivum gene for histone H1, complete cds, clone:TH315
          Length = 3025

 Score =  163 bits (82), Expect = 5e-37
 Identities = 129/145 (88%)
 Strand = Plus / Plus

                                                                        
Query: 219  agatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcaccgtcgcga 278
            |||||||| ||||||| |||||||| |||||||| ||   |||||||||||||||||| |
Sbjct: 1192 agatggtgacggaggcgatcgccgcgctgaaggagaggaacgggtcgagcaccgtcgcca 1251

                                                                        
Query: 279  tcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaagatgc 338
            ||| ||||| | ||||||| |||||||||||||||||||||||||| ||||||||| |  
Sbjct: 1252 tcgccaagtacatcgaggacaagcacaaggcgcacctcccggccaacttccgcaagttca 1311

                                     
Query: 339  tgctgacgcagatcaagaagctcgt 363
            |||||||||||||||||||||||||
Sbjct: 1312 tgctgacgcagatcaagaagctcgt 1336



 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                          
Query: 79  gccgacatcccggtgccccaggtggaggcgaccgccgaccccgtcgt 125
           ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 869 gccgacatcccggtgcctcaggtggaggcgaccgccgaccccgtcgt 915

---

>gb|AF107024.1|AF107024 Triticum aestivum histone H1 WH1B.1 mRNA, complete cds
          Length = 1114

 Score =  119 bits (60), Expect = 7e-24
 Identities = 136/159 (85%), Gaps = 2/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 210 cctacgccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagca 269
           ||||||| |||||||| |||||||||||| |||||||||||||  ||   ||||||||| 
Sbjct: 192 cctacgctgagatggtttcggaggccatcaccgccctgaaggagcgaacggggtcgagc- 250

                                                                       
Query: 270 ccgt-cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttc 328
           |||| ||| |||| ||||||| ||||||| |||||||||||||||||||||||||| |||
Sbjct: 251 ccgtacgccatcgccaagttcgtcgaggacaagcacaaggcgcacctcccggccaacttc 310

                                                  
Query: 329 cgcaagatgctgctgacgcagatcaagaagctcgtcgcc 367
           || ||||| |||  |  |||| |||||||||| ||||||
Sbjct: 311 cgtaagatcctgtcggtgcagctcaagaagctggtcgcc 349



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 57  tgcaatgtcgaccgacgtggttgccgacatcccggtgccccaggtggaggcgaccgccga 116
           |||||||||||| |||||||| |||||  ||||||  ||  |||||| |||| |||||||
Sbjct: 1   tgcaatgtcgactgacgtggtcgccgatgtcccggcccctgaggtggcggcggccgccga 60

                    
Query: 117 ccccgtcgt 125
           |||||||||
Sbjct: 61  ccccgtcgt 69



 Score = 44.1 bits (22), Expect = 0.31
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 148 ggccaaggcgcccaaggccaagaagtccactggcccgaagaagccc 193
           |||||||||| |||||||||||||| || | | ||||| |||||||
Sbjct: 124 ggccaaggcggccaaggccaagaagccctccgccccgaggaagccc 169

---

>ref|NM_185048.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1371

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 130/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 212 tacgccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcacc 271
           |||||||||||| | |||||||| |||||  | |||||||| ||   |||||||||| | 
Sbjct: 266 tacgccgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc-ca 324

                                                                       
Query: 272 gt-cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccg 330
           || |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| |||||
Sbjct: 325 gtacgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccg 384

                                                
Query: 331 caagatgctgctgacgcagatcaagaagctcgtcgcc 367
           ||||  ||||||    |||||||||||||||||||||
Sbjct: 385 caagcagctgctcgtccagatcaagaagctcgtcgcc 421

---

>dbj|AK099211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E13, full
           insert sequence
          Length = 1328

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 130/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 212 tacgccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcacc 271
           |||||||||||| | |||||||| |||||  | |||||||| ||   |||||||||| | 
Sbjct: 281 tacgccgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc-ca 339

                                                                       
Query: 272 gt-cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccg 330
           || |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| |||||
Sbjct: 340 gtacgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccg 399

                                                
Query: 331 caagatgctgctgacgcagatcaagaagctcgtcgcc 367
           ||||  ||||||    |||||||||||||||||||||
Sbjct: 400 caagcagctgctcgtccagatcaagaagctcgtcgcc 436

---

>dbj|AK067840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128M09, full
           insert sequence
          Length = 1389

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 130/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 212 tacgccgagatggtgtcggaggccatcgccgccctgaaggaaagaggcgggtcgagcacc 271
           |||||||||||| | |||||||| |||||  | |||||||| ||   |||||||||| | 
Sbjct: 281 tacgccgagatgatctcggaggcgatcgcgacgctgaaggagaggaccgggtcgagc-ca 339

                                                                       
Query: 272 gt-cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccg 330
           || |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| |||||
Sbjct: 340 gtacgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccg 399

                                                
Query: 331 caagatgctgctgacgcagatcaagaagctcgtcgcc 367
           ||||  ||||||    |||||||||||||||||||||
Sbjct: 400 caagcagctgctcgtccagatcaagaagctcgtcgcc 436

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 274      cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
                |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| ||||||||
Sbjct: 33000994 cgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccgcaa 33001053

                                                  
Query: 334      gatgctgctgacgcagatcaagaagctcgtcgcc 367
                |  ||||||    |||||||||||||||||||||
Sbjct: 33001054 gcagctgctcgtccagatcaagaagctcgtcgcc 33001087

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 274      cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
                |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| ||||||||
Sbjct: 33091504 cgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccgcaa 33091563

                                                  
Query: 334      gatgctgctgacgcagatcaagaagctcgtcgcc 367
                |  ||||||    |||||||||||||||||||||
Sbjct: 33091564 gcagctgctcgtccagatcaagaagctcgtcgcc 33091597

---

>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete
              sequence
          Length = 139823

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                          
Query: 274    cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
              |||||||||||||||| ||||||| ||||||||||  ||||| ||  |||| ||||||||
Sbjct: 122314 cgcgatcggcaagttcctcgaggacaagcacaaggaccacctgccatccaacttccgcaa 122255

                                                
Query: 334    gatgctgctgacgcagatcaagaagctcgtcgcc 367
              |  ||||||    |||||||||||||||||||||
Sbjct: 122254 gcagctgctcgtccagatcaagaagctcgtcgcc 122221

---

>gb|BT016422.1| Zea mays clone Contig255 mRNA sequence
          Length = 1248

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 78/94 (82%)
 Strand = Plus / Plus

                                                                       
Query: 274 cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
           |||||||| ||||||| ||||||| ||||||||||   | |||||| |||| ||||||||
Sbjct: 299 cgcgatcgccaagttcgtcgaggacaagcacaaggacaagctcccgcccaacttccgcaa 358

                                             
Query: 334 gatgctgctgacgcagatcaagaagctcgtcgcc 367
           | | |||||    ||| |||||||||||||||||
Sbjct: 359 gctcctgctcggccagctcaagaagctcgtcgcc 392

---

>gb|AF394122.1|AF394122 Fritillaria liliacea clone 1GB-6 histone-like protein gene, partial
           cds
          Length = 818

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 134 ccggcggcgaagccggccaaggc 156
           |||||||||||||||||||||||
Sbjct: 37  ccggcggcgaagccggccaaggc 59

---

>gb|AF394120.1|AF394120 Fritillaria liliacea clone 1GB-4 histone-like protein gene, partial
           cds
          Length = 781

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 134 ccggcggcgaagccggccaaggc 156
           |||||||||||||||||||||||
Sbjct: 37  ccggcggcgaagccggccaaggc 59

---

>gb|AF394117.1|AF394117 Fritillaria liliacea clone 1GB-1 histone-like protein gene, partial
           cds
          Length = 818

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 134 ccggcggcgaagccggccaaggc 156
           |||||||||||||||||||||||
Sbjct: 37  ccggcggcgaagccggccaaggc 59

---

>gb|BT016684.1| Zea mays clone Contig517 mRNA sequence
          Length = 1070

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 274 cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
           |||||| | ||||||| | ||||| |||||||||||  | |||||| |||| ||||||||
Sbjct: 306 cgcgattgccaagttcgtggaggacaagcacaaggccaagctcccgcccaacttccgcaa 365

            
Query: 334 g 334
           |
Sbjct: 366 g 366

---

>ref|NM_136582.2| Drosophila melanogaster CG8235-RA (CG8235), mRNA
          Length = 1032

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 143 aagccggccaaggcgcccaaggccaagaagtcca 176
           ||||||||||||| ||||||||  ||||||||||
Sbjct: 398 aagccggccaaggagcccaaggaaaagaagtcca 431

---

>gb|AY071480.1| Drosophila melanogaster RE55091 full length cDNA
          Length = 1045

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 143 aagccggccaaggcgcccaaggccaagaagtcca 176
           ||||||||||||| ||||||||  ||||||||||
Sbjct: 397 aagccggccaaggagcccaaggaaaagaagtcca 430

---

>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone
              BACR02C23, complete sequence
          Length = 168601

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 143    aagccggccaaggcgcccaaggccaagaagtcca 176
              ||||||||||||| ||||||||  ||||||||||
Sbjct: 120710 aagccggccaaggagcccaaggaaaagaagtcca 120677

---

>emb|X57077.1|ZMH1HIS Maize H1 mRNA for H1 histone
          Length = 1075

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 274 cgcgatcggcaagttcntcgaggagaagcacaaggcgcacctcccggccaatttccgcaa 333
           |||||| | ||||||| | ||||| |||||||||||  | |||||| |||| ||||||||
Sbjct: 238 cgcgattgccaagttcgtggaggacaagcacaaggccaagctcccgcccaacttccgcaa 297

            
Query: 334 g 334
           |
Sbjct: 298 g 298

---

>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete
              sequence
          Length = 271696

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 143    aagccggccaaggcgcccaaggccaagaagtcca 176
              ||||||||||||| ||||||||  ||||||||||
Sbjct: 133830 aagccggccaaggagcccaaggaaaagaagtcca 133797

---

>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones
              DS05998, DS07727, DS05175, and DS01885, complete sequence
          Length = 204617

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 143    aagccggccaaggcgcccaaggccaagaagtcca 176
              ||||||||||||| ||||||||  ||||||||||
Sbjct: 186519 aagccggccaaggagcccaaggaaaagaagtcca 186552

---

>gb|BT018112.1| Zea mays clone EL01N0553G06.c mRNA sequence
          Length = 1005

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 212 tacgccgagatggtgtcggaggccatcgc 240
           |||||||||||||| |||||||| |||||
Sbjct: 237 tacgccgagatggtctcggaggcgatcgc 265

---

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    acgtggttgccgacatcccgg 91
             |||||||||||||||||||||
Sbjct: 21959 acgtggttgccgacatcccgg 21979

---

>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    caccgtcgcgatcggcaagtt 288
              |||||||||||||||||||||
Sbjct: 130407 caccgtcgcgatcggcaagtt 130387

---

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 149     gccaaggcgcccaaggccaagaagt 173
               ||||||||| |||||||||||||||
Sbjct: 2575653 gccaaggcggccaaggccaagaagt 2575629

---

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     ggcggcgaagccggccaaggc 156
               |||||||||||||||||||||
Sbjct: 5668593 ggcggcgaagccggccaaggc 5668613

---

>gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the complete genome
          Length = 10881

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 106  gcgaccgccgaccccgtcgtc 126
            |||||||||||||||||||||
Sbjct: 7444 gcgaccgccgaccccgtcgtc 7424

---

>ref|NM_197805.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0057L21.15), mRNA
          Length = 2202

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  acgctctcctccctcctcgc 42
           ||||||||||||||||||||
Sbjct: 385 acgctctcctccctcctcgc 404

---

>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 130    cacgccggcggcgaagccggccaaggcg 157
              |||||||||| |||||||||||| ||||
Sbjct: 773168 cacgccggcgacgaagccggccacggcg 773195

---

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    tggaggcgaccgccgaccccgtcg 124
              ||||||||||||||||| ||||||
Sbjct: 571059 tggaggcgaccgccgacgccgtcg 571036

---

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 149     gccaaggcgcccaaggccaagaag 172
               |||||||||| |||||||||||||
Sbjct: 4491634 gccaaggcgcgcaaggccaagaag 4491611

---

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     cgccggcggcgaagccggcc 151
               ||||||||||||||||||||
Sbjct: 4267490 cgccggcggcgaagccggcc 4267471

---

>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 24     cgctctcctccctcctcgcctcct 47
              |||||||||||||||| |||||||
Sbjct: 282637 cgctctcctccctccttgcctcct 282660

---

>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     cgctctcctccctcctcgcctcct 47
              |||||||||||||||| |||||||
Sbjct: 100283 cgctctcctccctccttgcctcct 100260

---

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    gccaaggcgcccaaggccaagaag 172
              |||||||||| |||||||||||||
Sbjct: 612074 gccaaggcgcgcaaggccaagaag 612097

---

>gb|AE012494.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 402
            of 460 of the complete genome
          Length = 10873

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 149  gccaaggcgcccaaggccaagaag 172
            |||||||||| |||||||||||||
Sbjct: 6035 gccaaggcgcgcaaggccaagaag 6012

---

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 149     gccaaggcgcccaaggccaagaag 172
               |||||||||||||||| |||||||
Sbjct: 2263182 gccaaggcgcccaagggcaagaag 2263159

---

>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete
             sequence
          Length = 183046

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    acgctctcctccctcctcgc 42
             ||||||||||||||||||||
Sbjct: 38224 acgctctcctccctcctcgc 38205

---

>gb|AF394115.1|AF394115 Fritillaria liliacea clone 1GA-4 histone-like protein gene, partial
           cds
          Length = 827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 134 ccggcggcgaagccggccaaggcgcccaaggccaag 169
           |||| ||||||||||||||||| | | |||||||||
Sbjct: 37  ccggtggcgaagccggccaaggtgacgaaggccaag 72

---

>gb|AF394114.1|AF394114 Fritillaria liliacea clone 1GA-3 histone-like protein gene, partial
           cds
          Length = 827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 134 ccggcggcgaagccggccaaggcgcccaaggccaag 169
           |||| ||||||||||||||||| | | |||||||||
Sbjct: 37  ccggtggcgaagccggccaaggtgacgaaggccaag 72

---

>gb|AF394113.1|AF394113 Fritillaria liliacea clone 1GA-2 histone-like protein gene, partial
           cds
          Length = 827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 134 ccggcggcgaagccggccaaggcgcccaaggccaag 169
           |||| ||||||||||||||||| | | |||||||||
Sbjct: 37  ccggtggcgaagccggccaaggtgacgaaggccaag 72

---

>gb|AF394112.1|AF394112 Fritillaria liliacea clone 1GA-1 histone-like protein gene, partial
           cds
          Length = 827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 134 ccggcggcgaagccggccaaggcgcccaaggccaag 169
           |||| ||||||||||||||||| | | |||||||||
Sbjct: 37  ccggtggcgaagccggccaaggtgacgaaggccaag 72

---

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 149     gccaaggcgcccaaggccaagaag 172
               |||||||||| |||||||||||||
Sbjct: 4500335 gccaaggcgcgcaaggccaagaag 4500312

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 133     gccggcggcgaagccggccaaggc 156
               |||||| |||||||||||||||||
Sbjct: 1261024 gccggccgcgaagccggccaaggc 1261047

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       acgctctcctccctcctcgc 42
                ||||||||||||||||||||
Sbjct: 21970097 acgctctcctccctcctcgc 21970116

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 28       ctcctccctcctcgcctcct 47
                ||||||||||||||||||||
Sbjct: 14555139 ctcctccctcctcgcctcct 14555120

---

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cgccggcggcgaagccggcc 151
              ||||||||||||||||||||
Sbjct: 734551 cgccggcggcgaagccggcc 734570

---

>gb|AE004581.1| Pseudomonas aeruginosa PAO1, section 142 of 529 of the complete genome
          Length = 13203

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gccggcggcgaagccggcca 152
             ||||||||||||||||||||
Sbjct: 12348 gccggcggcgaagccggcca 12367

---

>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1294_G06
          Length = 115468

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ctcctccctcctcgcctcct 47
             ||||||||||||||||||||
Sbjct: 53428 ctcctccctcctcgcctcct 53409

---

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    gtcgagcaccgtcgcgatcg 281
              ||||||||||||||||||||
Sbjct: 237859 gtcgagcaccgtcgcgatcg 237878

---

>dbj|AB012694.1| Lilium longiflorum p35 mRNA for variant of histone H1, complete cds
          Length = 980

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 134 ccggcggcgaagccggccaaggcg 157
           ||||| ||||||||||||||||||
Sbjct: 106 ccggcagcgaagccggccaaggcg 129

---

>dbj|AK072336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044D03, full
           insert sequence
          Length = 2785

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  acgctctcctccctcctcgc 42
           ||||||||||||||||||||
Sbjct: 426 acgctctcctccctcctcgc 445

---

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 149    gccaaggcgcccaaggccaagaag 172
              |||||||||| |||||||||||||
Sbjct: 624095 gccaaggcgcgcaaggccaagaag 624118

---

>gb|DQ125333.1| Sapovirus Hu/Angelholm/SW278/2004/SE polyprotein mRNA, complete cds;
            and unknown genes
          Length = 7437

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  ccgagatggtgtcggaggcc 235
            ||||||||||||||||||||
Sbjct: 2454 ccgagatggtgtcggaggcc 2435

---

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     aatttccgcaagatgctgct 342
               ||||||||||||||||||||
Sbjct: 1787296 aatttccgcaagatgctgct 1787315

---

>gb|U82763.1|XCU82763 Xanthomonas campestris pv. campestris primary sigma factor RpoD
            (rpoD) gene, complete cds
          Length = 2503

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  gccaaggcgcccaaggccaagaag 172
            |||||||||| |||||||||||||
Sbjct: 1606 gccaaggcgcgcaaggccaagaag 1629

---

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ggtggaggcgaccgccgacc 118
               ||||||||||||||||||||
Sbjct: 1411771 ggtggaggcgaccgccgacc 1411790

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 23       acgctctcctccctcctcgc 42
                ||||||||||||||||||||
Sbjct: 21981760 acgctctcctccctcctcgc 21981779

---

>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence
          Length = 120229

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    cgctctcctccctcctcgcctcct 47
             |||||||||||||||| |||||||
Sbjct: 39888 cgctctcctccctccttgcctcct 39865


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,366,991
Number of Sequences: 3902068
Number of extensions: 2366991
Number of successful extensions: 53115
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 51309
Number of HSP's gapped (non-prelim): 1790
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---