ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5j13 |
|---|---|
| Clone Library Name | barley_pub |
>SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110) Length = 963 Score = 37.0 bits (84), Expect = 0.020 Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 5/88 (5%) Frame = +3 Query: 21 IPLSWDKSKVKECCKAYGVIQDVHILKKSKAK---ISFVEFSSRKSALACVEGINSANIG 191 +P S K +++E CKA+G ++D+ ++ K +++VE+ + A V ++ I Sbjct: 808 LPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIK 867 Query: 192 GELKLAASLARPRREI--QLDKKSAKGG 269 + A P+R++ + + + A GG Sbjct: 868 ENIIKVAISNPPQRKVPEKPETRKAPGG 895
>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) Length = 981 Score = 36.6 bits (83), Expect = 0.026 Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 5/88 (5%) Frame = +3 Query: 21 IPLSWDKSKVKECCKAYGVIQDVHILKKSKAK---ISFVEFSSRKSALACVEGINSANIG 191 +P S K +++E CKA+G ++D+ ++ K +++VE+ + A V ++ I Sbjct: 826 LPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIK 885 Query: 192 GELKLAASLARPRREI--QLDKKSAKGG 269 + A P+R++ + + + A GG Sbjct: 886 ENVIKVAISNPPQRKVPEKPETRKAPGG 913
>CYLC2_BOVIN (Q28092) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)| Length = 488 Score = 35.0 bits (79), Expect = 0.075 Identities = 20/71 (28%), Positives = 31/71 (43%) Frame = +3 Query: 204 LAASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGD 383 LAA P++E ++ AK K +S K + K ++ +V K+ P KL K Sbjct: 92 LAARSRHPQKETPPSQEDAKQAAKPSSPKVKKSKEDKDKSDSEAESIVSKEKPRKLSKAK 151 Query: 384 VSKLTSHVDVK 416 K D+K Sbjct: 152 EEKPDEKKDLK 162
>RRF_HELPJ (Q9ZJX1) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 35.0 bits (79), Expect = 0.075 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = +3 Query: 168 GINSANIGGELKL--AASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNRE 341 G+N N G +KL R+ I D K+ KV T +D NN +KK +++E Sbjct: 88 GVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKE 147 Query: 342 VVVKDSPHKLRKGDVSKLTSHVDVKVPQS 428 + +S K + + K+T K+ +S Sbjct: 148 ISEDES--KKAQEQIQKITDEAIKKIDES 174
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 34.3 bits (77), Expect = 0.13 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = +3 Query: 21 IPLSWDKSKVKECCKAYGVIQDVHILKKSKAK---ISFVEFSSRKSALACVEGINSANIG 191 +P S K ++++ CKA+G ++D+ ++ K +++VE+ + A V ++ I Sbjct: 808 LPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIR 867 Query: 192 GELKLAASLARPRREI 239 + A P+R++ Sbjct: 868 ENVIKVAISNPPQRKV 883
>RRF_STRA5 (P66741) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 33.5 bits (75), Expect = 0.22 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +3 Query: 108 KAKISFVEFSSRKSALACVEGINSANIGGELKLA--ASLARPRREIQLDKKSAKGGVKVN 281 K+ I +E + +S L GIN AN G ++L A RR++ + K K+ Sbjct: 72 KSSIKDIERAINESDL----GINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIA 127 Query: 282 SDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGDVSKLT----SHVD 410 +D + KK+ +N+E+ D K + D+ K T H+D Sbjct: 128 IRNIRRDAMDEAKKQEKNKEITEDDL--KSLEKDIQKATDDAVKHID 172
>RRF_STRA3 (P66740) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 33.5 bits (75), Expect = 0.22 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%) Frame = +3 Query: 108 KAKISFVEFSSRKSALACVEGINSANIGGELKLA--ASLARPRREIQLDKKSAKGGVKVN 281 K+ I +E + +S L GIN AN G ++L A RR++ + K K+ Sbjct: 72 KSSIKDIERAINESDL----GINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIA 127 Query: 282 SDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGDVSKLT----SHVD 410 +D + KK+ +N+E+ D K + D+ K T H+D Sbjct: 128 IRNIRRDAMDEAKKQEKNKEITEDDL--KSLEKDIQKATDDAVKHID 172
>RRF_HELPY (P56398) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 33.1 bits (74), Expect = 0.29 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = +3 Query: 168 GINSANIGGELKL--AASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNRE 341 G+N N G +KL + R+ I D K+ KV +D NN +KK +++E Sbjct: 88 GVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKVAVRNIRQDANNQVKKLEKDKE 147 Query: 342 VVVKDSPHKLRKGDVSKLTSHVDVKVPQS 428 + +S K + + K+T K+ +S Sbjct: 148 ISEDES--KKAQEQIQKITDEAIKKIDES 174
>Y1941_CLOTE (Q892Z2) Hypothetical RNA methyltransferase CTC_01941 (EC 2.1.1.-)| Length = 456 Score = 32.0 bits (71), Expect = 0.64 Identities = 27/120 (22%), Positives = 51/120 (42%) Frame = +3 Query: 3 GTRLEHIPLSWDKSKVKECCKAYGVIQDVHILKKSKAKISFVEFSSRKSALACVEGINSA 182 G + + PLS+ ++ K K Y +++D + +SK+K F L C G Sbjct: 276 GLKFKITPLSFFQTNSKGAEKLYSIVRD--FIGESKSKTVF--------DLYCGTGTIGQ 325 Query: 183 NIGGELKLAASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVKDSP 362 + E K + ++ +++AK N + + D IK+ Q +V++ D P Sbjct: 326 IVAPEAKKVIGIELIEEAVESARENAKLNNLNNCEFIAGDIAQVIKEVKQKPDVIILDPP 385
>PR1_PHAVU (P25985) Pathogenesis-related protein 1 (PvPR1) (PR2)| Length = 155 Score = 32.0 bits (71), Expect = 0.64 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +3 Query: 114 KISFVEFSSRKSALACVEGINSANIGGELKLAASLARPR--REIQLDKKSAKG 266 KISFVE K L +E I+ AN+G + +A P +I D K + G Sbjct: 55 KISFVEDGETKFVLHKIESIDEANLGYSYSIVGGVALPETAEKITFDSKLSDG 107
>PGK_MYCH2 (Q7WZ28) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 404 Score = 32.0 bits (71), Expect = 0.64 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%) Frame = +3 Query: 78 IQDVHILKKS-------KAKISFVEFSSRKSALACVEGINS-ANIGGELKLAASLARPRR 233 I D+ L K+ I E SS K +A ++ I N GG+L + + L R + Sbjct: 11 IDDIDFLNKTVILRVDFNVPIKNGEISSIKRIIASLKTIKKIVNNGGKLVILSHLGRIKS 70 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGDV 386 + L KKS +++ ++ ++ IK +NR V+++ +L KG++ Sbjct: 71 KEDLPKKS----LRIVAEKLAEILGQEIKFIPENRGPKVENAISQLEKGEI 117
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 31.6 bits (70), Expect = 0.83 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 7/63 (11%) Frame = +3 Query: 21 IPLSWDKSKVKECCKAYGVIQDVHILK-------KSKAKISFVEFSSRKSALACVEGINS 179 +P +W + ++E + YG + +++IL+ +SK FV F +RK+AL +++ Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKG-CCFVTFYTRKAALEAQNALHN 81 Query: 180 ANI 188 + Sbjct: 82 MKV 84
>PR2_PHAVU (P25986) Pathogenesis-related protein 2 (PvPR2)| Length = 155 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +3 Query: 114 KISFVEFSSRKSALACVEGINSANIGGELKLAASLARP--RREIQLDKKSAKG 266 KISFVE K L +E I+ AN+G + A P +I +D K + G Sbjct: 55 KISFVEDGETKFVLHKIEEIDEANLGYSYSIVGGAALPDTAEKISIDSKLSDG 107
>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1| (RNA-binding protein srp-5) (CeSRp75) Length = 312 Score = 31.2 bits (69), Expect = 1.1 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +3 Query: 63 KAYGVIQDVHILKKSKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPR 230 + YG I+DV + K FVEF ++ A V +N +GGE ++ ++PR Sbjct: 24 RGYGQIRDVLL----KNGFGFVEFDDKRDAEDAVHDLNGKELGGE-RVILDYSKPR 74
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 7/63 (11%) Frame = +3 Query: 21 IPLSWDKSKVKECCKAYGVIQDVHILK-------KSKAKISFVEFSSRKSALACVEGINS 179 +P +W + ++E + YG + ++++L+ +SK FV F +RK+AL +++ Sbjct: 23 VPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKG-CCFVTFYTRKAALEAQNALHN 81 Query: 180 ANI 188 + Sbjct: 82 MKV 84
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +3 Query: 222 RPRREIQLDKKSAKGGVKVNSDATSKD-TNNSIKKKNQNREVVVKDSPHKLRKGDVSKL 395 +P + LD K K K + KD ++S+K +VK SP + +GDV KL Sbjct: 1133 KPEKNKLLDSKGEKRKRKTEEKSVDKDFESSSMKISKVEGTEIVKPSPKRKMEGDVEKL 1191
>RRF_STAES (Q8CSU0) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGG--VKVNSDATSKDTNNSI 317 K+ +A G+N + G ++++ R +L K+ K G KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAKVSIRNIRRDINDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKGDVSKLTSHVDVKVPQ 425 KK +N ++ D + + DV K T + ++ Q Sbjct: 139 KKDEKNGDITEDDL--RSQTDDVQKATDNSIKEIDQ 172
>RRF_STAEQ (Q5HPT2) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGG--VKVNSDATSKDTNNSI 317 K+ +A G+N + G ++++ R +L K+ K G KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAKVSIRNIRRDINDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKGDVSKLTSHVDVKVPQ 425 KK +N ++ D + + DV K T + ++ Q Sbjct: 139 KKDEKNGDITEDDL--RSQTDDVQKATDNSIKEIDQ 172
>VAL1_CLVN (P14972) AL1 protein (40.4 kDa protein)| Length = 358 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = +3 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQN--REVVVKD 356 + Q+D +SA+GG + +DA +K N+ K + N RE+V KD Sbjct: 114 QFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKD 156
>VAL1_CLVK (P14982) AL1 protein (40.4 kDa protein)| Length = 358 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = +3 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQN--REVVVKD 356 + Q+D +SA+GG + +DA +K N+ K + N RE+V KD Sbjct: 114 QFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKD 156
>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)| Length = 165 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +3 Query: 39 KSKVKECCKAYGVIQDVHILKKSKAKIS----FVEFSSRKSALACVEGINSANIGGE 197 + +++E YG I+++H+ + S VE+ + K ALA E +N A I G+ Sbjct: 86 EDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ 142
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/70 (30%), Positives = 32/70 (45%) Frame = +3 Query: 102 KSKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVN 281 KS + ++ + S AL GIN AN+G L S +++ + DK GGV+V Sbjct: 632 KSSSSLNNLNSFSNTGALLSSNGINLANLGNPL----SQLNKKQKKRSDKDINDGGVQVL 687 Query: 282 SDATSKDTNN 311 + NN Sbjct: 688 VSCVDTNVNN 697
>H1L1_OSTED (Q86QH9) Sperm-specific H1/protamine-like protein type 1 precursor| [Contains: Sperm-specific protein OE1 (Sperm-specific linker histone H1-like protein OE1); Sperm-specific protein OE3 (Protamine-like OS3)] Length = 202 Score = 30.4 bits (67), Expect = 1.9 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Frame = +3 Query: 141 RKSALACVEGINSANIGGELKLAAS-------LARPRREIQLDKKS-------AKGGVKV 278 RK LA +GIN++++G +KLA + L RP+ + A K Sbjct: 68 RKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPKTSAGASGATGSFRVGKAPASPKK 127 Query: 279 NSDATSKDTNNSIKKKNQNREVVVKDSPHK 368 A S +S K KN++ K SP K Sbjct: 128 AKKAKSPKKKSSKKSKNKSNNAKAKKSPKK 157
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Frame = +3 Query: 18 HIPLSWDKSKVKECCKAYGVIQDVHILKKSKAK---ISFVEFSSRKSALACVEGINSANI 188 ++P S KS + + + G + + + SK I+ VE+ + A C+E +N+ N Sbjct: 357 NLPFSTAKSDLYDLFETIGKVNNAELRYDSKGAPTGIAVVEYDNVDDADVCIERLNNYNY 416 Query: 189 GG 194 GG Sbjct: 417 GG 418
>RRF_STAAW (P68787) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAU (P68786) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAS (Q6G9V4) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAR (Q6GHH6) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAN (P99130) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAM (P68785) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_STAAC (Q5HGH2) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Frame = +3 Query: 144 KSALACVEGINSANIGGELKLAA-SLARPRREIQL-DKKSAKGGVKVNSDATSKDTNNSI 317 K+ +A G+N + G +++A +L RR+ ++ D K KV+ +D N+ + Sbjct: 79 KAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQL 138 Query: 318 KKKNQNREVVVKDSPHKLRKG--DVSKLTSHVDVKVPQ 425 KK +N ++ + +LR G DV K T + ++ Q Sbjct: 139 KKDEKNGDI----TEDELRSGTEDVQKATDNSIKEIDQ 172
>RRF_BACHD (Q9KA66) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 184 Score = 30.0 bits (66), Expect = 2.4 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 5/111 (4%) Frame = +3 Query: 108 KAKISFVEFSSRKSALACVEGINSANIGGELKLAAS-LARPRRE--IQLDKKSAKGGVKV 278 K+ IS +E + +KS L G+ +N G +++ L RR +L KKSA+ KV Sbjct: 71 KSSISDIERAIQKSDL----GLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEA-KV 125 Query: 279 NSDATSKDTNNSIKKKNQNREVVVKDSPHKLRK--GDVSKLTSHVDVKVPQ 425 +D N+ +KK+ ++ E+ D LR+ DV KLT ++ Q Sbjct: 126 AVRNIRRDANDDLKKRQKDGELTEDD----LRRVTEDVQKLTDKYIEQIDQ 172
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 30.0 bits (66), Expect = 2.4 Identities = 33/152 (21%), Positives = 54/152 (35%), Gaps = 24/152 (15%) Frame = +3 Query: 12 LEHIPLSWDKSKVKECCKAYGVIQDVHILKKSKAK-----------------------IS 122 ++HIPLSW + + K++G I V ++ +K Sbjct: 544 VKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSSRGYG 603 Query: 123 FVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVNSDATSKD 302 FV F S A + + + + L+ S A+ R G + + D Sbjct: 604 FVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKR-----------GNLSSSDDDDQSQ 652 Query: 303 TNNSIKKKN-QNREVVVKDSPHKLRKGDVSKL 395 T+NS K +N Q K P K K ++ L Sbjct: 653 TDNSSKFQNFQPHNDYHKAYPTKYNKKFINAL 684
>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific| linker histone H1-like protein) [Contains: Sperm-specific protein PHI-3 (Protamine-like protein PHI-3) (PL-IV)] Length = 202 Score = 30.0 bits (66), Expect = 2.4 Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 13/109 (11%) Frame = +3 Query: 141 RKSALACVEGINSANIGGELKLAAS-------LARPRREIQLDKKSAKGGVKVN----SD 287 RK LA +GIN++++G +KLA + L RP+ A G +V S Sbjct: 67 RKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRPK--TSAGASGATGSFRVGKAPASP 124 Query: 288 ATSKDTNNSIKK--KNQNREVVVKDSPHKLRKGDVSKLTSHVDVKVPQS 428 +K + KK KN++ K SP K K V K T K P+S Sbjct: 125 KKAKKAKSPKKKSSKNKSNNAKAKKSPRK--KAAVKKSTKS-KAKKPKS 170
>RRF_WOLSU (Q7MAD8) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 186 Score = 29.6 bits (65), Expect = 3.2 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = +3 Query: 168 GINSANIGGELKL--AASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNRE 341 G+N N G +KL + R+EI D K+ KV K++N+ IKK +++ Sbjct: 89 GVNPNNDGDVIKLFFPPMTSEQRKEIAKDAKALGEKAKVAVRNIRKESNDKIKKLEKDK- 147 Query: 342 VVVKDSPHKLRKGDVSKLTSHVDVKV 419 ++ + K +V K T K+ Sbjct: 148 -LITEDQSKKAHDEVQKYTDDYVKKI 172
>HRP3_SCHPO (O14139) Chromodomain helicase hrp3 (EC 3.6.1.-) (ATP-dependent| helicase hrp3) Length = 1388 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = +3 Query: 294 SKDTNNSIKKKNQNREVVVKDSPHKLRKGD--VSKLTSH 404 +K T+NS+ K +N+E V + H +R+G+ +S L H Sbjct: 1163 TKQTDNSVPKDKENKEKKVPSAVHLVRRGEYLLSALREH 1201
>MYSS_CYPCA (Q90339) Myosin heavy chain, fast skeletal muscle| Length = 1935 Score = 29.3 bits (64), Expect = 4.1 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 12/102 (11%) Frame = +3 Query: 114 KISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRREI----QLDKKSAKGGVKVN 281 K++ E + + N++ I + KL A L + + E+ Q + + + K Sbjct: 1701 KVAEQELVDASERVGLLHSQNTSLINTKKKLEADLVQVQGEVDDAVQEARNAEEKAKKAI 1760 Query: 282 SDAT--------SKDTNNSIKKKNQNREVVVKDSPHKLRKGD 383 +DA +DT+ +++ +N EV VKD H+L + + Sbjct: 1761 TDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAE 1802
>ARGR1_BACHK (Q6HP30) Arginine repressor 1| Length = 149 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 210 ASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVK 353 A+++R RE+ L K ++ G+ + + + IK K + REVVVK Sbjct: 39 ATVSRDIRELNLTKVPSQEGLMIYKIFSEEHLQTDIKLKKKLREVVVK 86
>ARGR1_BACCR (Q81II2) Arginine repressor 1| Length = 149 Score = 29.3 bits (64), Expect = 4.1 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +3 Query: 210 ASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVK 353 A+++R RE+ L K ++ G+ + + + IK K + REVVVK Sbjct: 39 ATVSRDIRELNLTKVPSQEGLMIYKVFSEEHLQTDIKLKKKLREVVVK 86
>H1L2_OSTED (Q86QI0) Sperm-specific H1/protamine-like protein type 2 precursor| [Contains: Sperm-specific protein OE2 (Sperm-specific linker histone H1-like protein OE2); Sperm-specific protein OE3 (Protamine-like OS3)] (Fragment) Length = 126 Score = 29.3 bits (64), Expect = 4.1 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Frame = +3 Query: 141 RKSALACVEGINSANIGGELKLA-----ASLARPRREIQLDKKSAKGGVKVN-------- 281 RK LA +GIN++++G +KLA S R + A G +V Sbjct: 32 RKYILANNKGINTSHLGSAMKLAFAKGLKSGVLVRLKTSAGASGATGSFRVGKAPASPKK 91 Query: 282 -SDATSKDTNNSIKKKNQNREVVVKDSPHK 368 A S +S K KN++ K SP K Sbjct: 92 AKKAKSPKKKSSKKSKNKSNNAKAKKSPKK 121
>CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)| Length = 781 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVKDSPHK---LRKGDVSKLTSH 404 ++++ + +K VKV+S T ++ N +K+ +QN +VV D L GD+ + S+ Sbjct: 614 DLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYLSN 673
>Y608_HAEIN (Q57486) Hypothetical protein HI0608| Length = 461 Score = 28.9 bits (63), Expect = 5.4 Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Frame = -3 Query: 386 HITFSQFMW*ILHYDLPILVLFLYRIVG----VFRSCITIDLDPTFSTL 252 ++TFS ++W Y LPI+++ L ++G +F+ + ++ + TF + Sbjct: 202 NLTFSDWLW----YGLPIMIILLPLMIGILYIIFKPKLHLNFEQTFENI 246
>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4 kinase) Length = 1007 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 9/82 (10%) Frame = +3 Query: 201 KLAASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIK------KKNQNREVVVKDSP 362 K + S ++ R + DKK +KGG+++ + T++ + K K++++++ K Sbjct: 182 KRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKS 241 Query: 363 HKLRKGD---VSKLTSHVDVKV 419 LR+ + K S D KV Sbjct: 242 PTLRRRSQEKIGKARSPTDDKV 263
>VAL1_TGMV (P03567) AL1 protein| Length = 352 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +3 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKK 326 E Q+D +SA+GG + ++DA ++ N S K++ Sbjct: 116 EFQVDGRSARGGCQTSNDAAAEALNASSKEE 146
>NOL6_XENLA (Q6NRY2) Nucleolar protein 6| Length = 1147 Score = 28.9 bits (63), Expect = 5.4 Identities = 24/76 (31%), Positives = 32/76 (42%) Frame = +3 Query: 105 SKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVNS 284 S A + F+ F + N+ GELK EIQ D SA+ + V Sbjct: 893 SSALVGFLRFLHLVATFDWKNSPLIVNLNGELK-----GSEYTEIQNDFISARAQLPVMF 947 Query: 285 DATSKDTNNSIKKKNQ 332 AT KD +S+ KNQ Sbjct: 948 IATPKDKKDSVWTKNQ 963
>IF2_WIGBR (Q8D2X6) Translation initiation factor IF-2| Length = 841 Score = 28.5 bits (62), Expect = 7.1 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 21/128 (16%) Frame = +3 Query: 96 LKKSKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVK 275 + K+ K + + + K + + IN I E KL + ++++ K K VK Sbjct: 109 IDKTFCKKNIKDLNKTKKYVELSKNINEREINFEKKLIKEPILDKSKLKISKNLIKKNVK 168 Query: 276 VNSDAT-----------------SKDTNNSI----KKKNQNREVVVKDSPHKLRKGDVSK 392 +N + K+ N I K KN+N + K ++L + + Sbjct: 169 INKNLNIYKKNEFKQNLKKNKLNKKEKNKKIEINYKVKNKNENIFKKIKSNRLFGSETNF 228 Query: 393 LTSHVDVK 416 +++D K Sbjct: 229 FNNNIDKK 236
>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory| protein UGA35) Length = 970 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Frame = +3 Query: 207 AASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVK----DSPHKLR 374 A + A P + ++ K++ VNS+ ++ ++N+ I N N +++ D P+ LR Sbjct: 8 ADNAASPTKSVKATTKNSSTNNNVNSNNSNNNSNHDILNFNDNYTTILQHLANDHPNILR 67 Query: 375 KGDVSKLTSH 404 + S+ H Sbjct: 68 EKGGSQQQQH 77
>VAL1_TYLCA (P36279) AL1 protein (C1 protein)| Length = 362 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 234 EIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQN--REVVVKD 356 E Q+D +SA+GG + +DA ++ N K + N RE+ KD Sbjct: 115 EFQIDGRSARGGQQSANDAYAQALNTGSKSEALNVLRELAPKD 157
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 28.5 bits (62), Expect = 7.1 Identities = 22/91 (24%), Positives = 40/91 (43%) Frame = +3 Query: 123 FVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVNSDATSKD 302 FVEF +++ A A + ++ I G +IQL +G + Sbjct: 690 FVEFRTKEQATAVISAMDGTVIDGH------------KIQLKLSHRQG-----------N 726 Query: 303 TNNSIKKKNQNREVVVKDSPHKLRKGDVSKL 395 + KKK +N +++VK+ P + + DV +L Sbjct: 727 AGSQEKKKAKNGKIIVKNLPFEATRKDVFEL 757
>ARGR1_BACC1 (Q73E88) Arginine repressor 1| Length = 149 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +3 Query: 210 ASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVK 353 A+++R RE+ + K ++ G+ + + + IK K + REVVVK Sbjct: 39 ATVSRDIRELNVTKVPSQEGLMIYKIFSEEHLQTDIKLKKKLREVVVK 86
>Y1060_METJA (Q58460) Hypothetical protein MJ1060| Length = 537 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Frame = -2 Query: 195 HHQYWHCLF---LPHKLMHSSWMRIRQKKFLLLTSLKCEHPESPH----MLCNI 55 H ++ H +F L HKL W + K ++ T++KC +S LCNI Sbjct: 273 HEKFIHTMFNIFLKHKLPFVLWFYLSIKDYISKTNIKCIVGDSERNFMFYLCNI 326
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)| Length = 1391 Score = 28.1 bits (61), Expect = 9.2 Identities = 27/119 (22%), Positives = 40/119 (33%) Frame = +3 Query: 36 DKSKVKECCKAYGVIQDVHILKKSKAKISFVEFSSRKSALACVEGINSANIGGELKLAAS 215 +K K KE K ++ +K K + + + C + E K Sbjct: 777 EKKKCKEAAK-----KEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEK 831 Query: 216 LARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGDVSK 392 A+ R+E KK K K A K + KK+ Q E + K RK K Sbjct: 832 AAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEK 890
>Y057_MYCGE (P47303) Hypothetical protein MG057| Length = 178 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +3 Query: 270 VKVNSDATSKDTNNSIKKKNQNREVVVKDSPHKLRKGDVSKLTSHV 407 + N A K+T N IKK ++ + V++ P + K SKL H+ Sbjct: 33 ITTNGSALKKETINLIKKISEKQTVILLLDPDQQGKKIRSKLEQHL 78
>PHYA_PEA (P15001) Phytochrome A| Length = 1124 Score = 28.1 bits (61), Expect = 9.2 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +3 Query: 171 INSANIGGELKLAASLARPR-----REIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQN 335 INS GG++ +AASL + + + L+ GG V A ++ N++ + + Sbjct: 1023 INSTPNGGQVVIAASLTKEQLGKSVHLVNLELSITHGGSGVPEAALNQMFGNNVLESEEG 1082 Query: 336 REVVVKDSPHKLRKGDVSKL 395 + + KL GDV L Sbjct: 1083 ISLHISRKLLKLMNGDVRYL 1102
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +3 Query: 105 SKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQ 242 S FV+FSS + A A E + I G K+ A+P+ E Q Sbjct: 589 SSKGFGFVDFSSPEDAKAAKEAMEDGEIDGN-KVTLDFAKPKGEFQ 633
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase xnp-1) (X-linked nuclear protein 1) Length = 1359 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = +3 Query: 291 TSKDTNNSIKKKNQNREVVVKDSPHKLRK 377 +S D +S KKKN N+ + K +P K RK Sbjct: 851 SSDDEGSSKKKKNGNKPEIKKTAPQKKRK 879
>RNR_HAEIN (P44907) Ribonuclease R (EC 3.1.-.-) (RNase R) (VacB protein| homolog) Length = 782 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/60 (28%), Positives = 30/60 (50%) Frame = +3 Query: 162 VEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVNSDATSKDTNNSIKKKNQNRE 341 VE ++ N + L S +PRR + K+ AK K SK +++KKK+ +++ Sbjct: 717 VEAVHLENKMVDFSLIGSERKPRRAGKTAKEKAKKVFKELPSKASKKRKSAVKKKDVSKK 776
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 28.1 bits (61), Expect = 9.2 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 4/105 (3%) Frame = +3 Query: 123 FVEFSSRKSALACVEGINSANIGGELKLAASLARPRREIQLDKKSAKGGVKVNSDATSKD 302 F EF +++ A A + + + G ++QL +G TS Sbjct: 701 FAEFKTKEQANAVISAMEGTILDGH------------KLQLKLSHRQG--------TSTT 740 Query: 303 TNNSIKKKNQNREVVVKDSPHKLRKGDVSKLTSHV----DVKVPQ 425 +S KKK +++VK+ P + + DV +L S V+VP+ Sbjct: 741 NASSKKKKKNQGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPK 785
>Y2114_ARCFU (O28166) Hypothetical protein AF2114 precursor| Length = 274 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +3 Query: 96 LKKSKAKISFVEFSSRKSALACVEGINSANIGGELKLAASLARPR 230 LK S + +SF++FS L + I AN GE+ + L +P+ Sbjct: 143 LKISDSSLSFLDFSDLNGNLTLKKLIVPANSTGEVSITYRLVKPK 187
>NDRG4_MOUSE (Q8BTG7) Protein NDRG4 (Protein Ndr4)| Length = 352 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -3 Query: 83 LNHPICFATFFNF 45 LNH +CF TFFNF Sbjct: 41 LNHKLCFNTFFNF 53
>NDRG4_HUMAN (Q9ULP0) Protein NDRG4 (Brain development-related molecule 1)| (Vascular smooth muscle cell-associated protein 8) (SMAP-8) Length = 352 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = -3 Query: 83 LNHPICFATFFNF 45 LNH +CF TFFNF Sbjct: 41 LNHKLCFNTFFNF 53
>MYH13_HUMAN (Q9UKX3) Myosin-13 (Myosin heavy chain, skeletal muscle, extraocular)| (MyHC-eo) Length = 1938 Score = 28.1 bits (61), Expect = 9.2 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 12/102 (11%) Frame = +3 Query: 114 KISFVEFSSRKSALACVEGINSANIGGELKLAASLARPRRE----IQLDKKSAKGGVKVN 281 ++S E + + N++ I + KL A +A+ + E IQ + + + K Sbjct: 1704 RLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVENSIQESRNAEEKAKKAI 1763 Query: 282 SDAT--------SKDTNNSIKKKNQNREVVVKDSPHKLRKGD 383 +DA +DT+ +++ +N E VKD H+L + + Sbjct: 1764 TDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAE 1805 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,125,726 Number of Sequences: 219361 Number of extensions: 1131130 Number of successful extensions: 3283 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 3201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3277 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
