ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5i14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SSB_ARATH (Q84J78) Single-stranded DNA-binding protein, mitochon... 115 6e-26
2SSB_BRUSU (Q8G0J1) Single-stranded DNA-binding protein (SSB) (He... 44 2e-04
3SSB_BRUME (Q8YHC2) Single-stranded DNA-binding protein (SSB) (He... 44 2e-04
4SSB_CAUCR (Q9A894) Single-stranded DNA-binding protein (SSB) (He... 44 2e-04
5SSB_BRUAB (P0C118) Single-stranded DNA-binding protein (SSB) (He... 44 3e-04
6SSB_BRUA2 (Q2YPX7) Single-stranded DNA-binding protein (SSB) (He... 44 3e-04
7SSB_RICCN (Q92G30) Single-stranded DNA-binding protein (SSB) (He... 41 0.001
8SSB_RHOS4 (Q9ZAQ8) Single-stranded DNA-binding protein (SSB) (He... 41 0.002
9SSB_BUCBP (Q89A53) Single-stranded DNA-binding protein (SSB) (He... 40 0.002
10SSB_RHILO (Q98M41) Single-stranded DNA-binding protein (SSB) (He... 40 0.002
11SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB) (He... 40 0.002
12SSB_RICPR (Q9ZCC2) Single-stranded DNA-binding protein (SSB) (He... 40 0.003
13SSB_BUCAI (P57610) Single-stranded DNA-binding protein (SSB) (He... 38 0.012
14SSB_BUCAP (Q8K933) Single-stranded DNA-binding protein (SSB) (He... 38 0.015
15SSB_RHIME (P56898) Single-stranded DNA-binding protein (SSB) (He... 37 0.020
16SSB_AGRT5 (Q8UF87) Single-stranded DNA-binding protein (SSB) (He... 37 0.020
17SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB) (He... 36 0.058
18SSB_SERMA (P25762) Single-stranded DNA-binding protein (SSB) (He... 35 0.075
19SSB_BPP1 (Q9XJG4) Single-stranded DNA-binding protein (SSB-P1) 35 0.13
20SSB_PROMI (P28046) Single-stranded DNA-binding protein (SSB) (He... 34 0.17
21SSB_BORPE (P66846) Single-stranded DNA-binding protein (SSB) (He... 34 0.22
22SSB_BORBR (P66847) Single-stranded DNA-binding protein (SSB) (He... 34 0.22
23SSB_BORPA (P59928) Single-stranded DNA-binding protein (SSB) (He... 34 0.22
24SSB1_CHLTE (Q8KB47) Single-stranded DNA-binding protein 1 (SSB 1... 33 0.29
25SSB_YERPE (Q8ZJ06) Single-stranded DNA-binding protein (SSB) (He... 33 0.37
26SSB_PSESM (Q889U1) Single-stranded DNA-binding protein (SSB) (He... 33 0.37
27SSB_VIBCH (Q9KUW2) Single-stranded DNA-binding protein (SSB) (He... 33 0.49
28SSB_VIBVU (Q8DCJ0) Single-stranded DNA-binding protein (SSB) (He... 33 0.49
29SSB_PROVU (Q8L2A6) Single-stranded DNA-binding protein (SSB) (He... 33 0.49
30SSB_RALEU (P59927) Single-stranded DNA-binding protein (SSB) (He... 32 0.64
31SSB_VIBPA (Q87LA3) Single-stranded DNA-binding protein (SSB) (He... 32 0.83
32SSB_PSEPK (Q88QK5) Single-stranded DNA-binding protein (SSB) (He... 32 1.1
33SSB_RAT (P28042) Single-stranded DNA-binding protein, mitochondr... 32 1.1
34SSB_MOUSE (Q9CYR0) Single-stranded DNA-binding protein, mitochon... 32 1.1
35SSB_BACTN (Q8A7M7) Single-stranded DNA-binding protein (SSB) (He... 32 1.1
36SSB_HUMAN (Q04837) Single-stranded DNA-binding protein, mitochon... 31 1.4
37SSBW_PSEPU (Q8VMM4) Single-stranded DNA-binding protein (SSB) (H... 31 1.4
38SSBS_XENLA (P09380) Single-stranded DNA-binding protein S, mitoc... 31 1.9
39SSBR_XENLA (P09381) Single-stranded DNA-binding protein R, mitoc... 30 2.4
40SSB_NITEU (Q82S98) Single-stranded DNA-binding protein (SSB) (He... 30 2.4
41SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB) (He... 29 7.1
42RIM1_YEAST (P32445) Single-stranded DNA-binding protein RIM1, mi... 28 9.2
43XPR6_YARLI (P42781) Dibasic-processing endoprotease precursor (E... 28 9.2 
>SSB_ARATH (Q84J78) Single-stranded DNA-binding protein, mitochondrial|
           precursor
          Length = 201

 Score =  115 bits (288), Expect = 6e-26
 Identities = 56/83 (67%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  GACLTERL-GAENLPMPAQWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           G    +RL GA N P PAQWHRIAVHNE LG+YAV+KL KN++VYVEGDIETRVYND I+
Sbjct: 103 GGMFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSIS 162

Query: 192 NLVKIVPEICVRFDGKIHLVQSG 260
           + VK +PEICVR DGKI +++ G
Sbjct: 163 SEVKSIPEICVRRDGKIRMIKYG 185
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>SSB_BRUSU (Q8G0J1) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 168

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH + + NE+L   A + L K A VY+EG ++TR + D   N       +  +F G++ 
Sbjct: 53  EWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSTEIVLQKFRGELQ 112

Query: 246 LVQS 257
           ++ S
Sbjct: 113 MLDS 116
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>SSB_BRUME (Q8YHC2) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 168

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH + + NE+L   A + L K A VY+EG ++TR + D   N       +  +F G++ 
Sbjct: 53  EWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSTEIVLQKFRGELQ 112

Query: 246 LVQS 257
           ++ S
Sbjct: 113 MLDS 116
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>SSB_CAUCR (Q9A894) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 167

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 20/72 (27%), Positives = 38/72 (52%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ + N++L   A + L K + VY+EG ++TR + D+          +  +F G++ 
Sbjct: 53  EWHRVVIFNDNLVKVAEQYLRKGSTVYIEGALQTRKWTDNTGQEKYSTEIVLQKFRGELT 112

Query: 246 LVQSGGTDVSKS 281
           ++   G D   S
Sbjct: 113 MLGGRGGDAGMS 124
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>SSB_BRUAB (P0C118) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 168

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH + + NE+L   A + L K A VY+EG ++TR + D   N       +  +F G++ 
Sbjct: 53  EWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSKEIVLQKFRGELQ 112

Query: 246 LVQS 257
           ++ S
Sbjct: 113 MLDS 116
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>SSB_BRUA2 (Q2YPX7) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 168

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH + + NE+L   A + L K A VY+EG ++TR + D   N       +  +F G++ 
Sbjct: 53  EWHSVVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSKEIVLQKFRGELQ 112

Query: 246 LVQS 257
           ++ S
Sbjct: 113 MLDS 116
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>SSB_RICCN (Q92G30) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 152

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 17/64 (26%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ + +E L +   R + K + +Y+EG ++TR +ND+          +   F+ ++ 
Sbjct: 53  EWHRVVIFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDNSGQEKYTTEVVLQNFNSQLI 112

Query: 246 LVQS 257
           L+ S
Sbjct: 113 LLDS 116
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>SSB_RHOS4 (Q9ZAQ8) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 173

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WH +A+ +E+L   A + L K + VY+EG +ETR + D
Sbjct: 53  EWHSVAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQD 91
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>SSB_BUCBP (Q89A53) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 166

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHRI   N+ L   A   L K + VY+EG ++TR + D  N + + + EI V   G + 
Sbjct: 54  EWHRIVFFNK-LAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGTMQ 111

Query: 246 LVQS 257
           ++ S
Sbjct: 112 MLGS 115
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>SSB_RHILO (Q98M41) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 172

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH + + NE +   A + L K   VYVEG ++TR + D           +  RF G++ 
Sbjct: 53  EWHNVVIFNEGIAKVAEQYLKKGMKVYVEGQLQTRKWQDQTGADKYTTEVVLQRFRGELQ 112

Query: 246 LV 251
           ++
Sbjct: 113 ML 114
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>SSB_BRAJA (Q89L50) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 164

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ + NE L   A + L K A VY+EG ++TR + D
Sbjct: 53  EWHRVVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
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>SSB_RICPR (Q9ZCC2) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 152

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 14/40 (35%), Positives = 27/40 (67%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDD 185
           +WHR+ + +E L +   R + K + +Y+EG ++TR +ND+
Sbjct: 53  EWHRVVIFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN 92
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>SSB_BUCAI (P57610) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 171

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHRI +  + L   A   L K + VY+EG ++TR + D  N L +   EI V   G + 
Sbjct: 54  EWHRIVLFGK-LAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQ 111

Query: 246 LV 251
           ++
Sbjct: 112 ML 113
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>SSB_BUCAP (Q8K933) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 162

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHRI +  + L   A   L K + VY+EG ++TR + D  N L +   E+ V   G + 
Sbjct: 54  EWHRIVLFGK-LAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEVIVNIGGTMQ 111

Query: 246 LV 251
           ++
Sbjct: 112 ML 113
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>SSB_RHIME (P56898) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 174

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINN 194
           +WH + V NE L     + + K A +Y+EG ++TR + D   N
Sbjct: 53  EWHTVVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQTGN 95
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>SSB_AGRT5 (Q8UF87) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 173

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINN 194
           +WH + V NE L     + + K A +Y+EG ++TR + D   N
Sbjct: 53  EWHTVVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQTGN 95
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>SSB_WIGBR (Q8D254) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 163

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ +  + L   A   L K + VY+EG+++TR + D  N   + + EI V  +G + 
Sbjct: 54  EWHRVILFGK-LAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQ 111

Query: 246 LV 251
           ++
Sbjct: 112 ML 113
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>SSB_SERMA (P25762) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 175

 Score = 35.4 bits (80), Expect = 0.075
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ +  + L   A   L K + VY+EG ++TR + D  +   +   EI V   G + 
Sbjct: 53  EWHRVVLFGK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNVGGTMQ 110

Query: 246 LV---QSGGTDVSKS 281
           ++   Q GG    +S
Sbjct: 111 MLGGRQGGGAPAGQS 125
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>SSB_BPP1 (Q9XJG4) Single-stranded DNA-binding protein (SSB-P1)|
          Length = 162

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WH++ +  + L   A   L K + VY+EG ++TR + DD   + +   EI V   G + 
Sbjct: 54  EWHKVVLFGK-LAEIASEYLRKGSQVYIEGKLKTRKWTDDA-GVERYTTEIIVSQGGTMQ 111

Query: 246 LVQSGGTDVSKS 281
           ++ +   D   S
Sbjct: 112 MIGARRDDSQSS 123
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>SSB_PROMI (P28046) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 173

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ +  + L   A   L K + VY+EG ++TR + D  +   +   E+ V   G + 
Sbjct: 53  EWHRVVIFGK-LAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGTMQ 110

Query: 246 LVQS-GGTDVSKS 281
           ++   GG D + S
Sbjct: 111 MLGGRGGQDNAPS 123
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>SSB_BORPE (P66846) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 166

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ ++N  L   A   L K  +VY+EG ++TR + D
Sbjct: 52  EWHRVVMYNR-LAEIAGEYLKKGRSVYIEGRLKTRKWQD 89
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>SSB_BORBR (P66847) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 166

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ ++N  L   A   L K  +VY+EG ++TR + D
Sbjct: 52  EWHRVVMYNR-LAEIAGEYLKKGRSVYIEGRLKTRKWQD 89
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>SSB_BORPA (P59928) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 162

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ ++N  L   A   L K  +VY+EG ++TR + D
Sbjct: 52  EWHRVVMYNR-LAEIAGEYLKKGRSVYIEGRLKTRKWQD 89
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>SSB1_CHLTE (Q8KB47) Single-stranded DNA-binding protein 1 (SSB 1)|
           (Helix-destabilizing protein 1)
          Length = 162

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +3

Query: 48  NLPMPAQWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVR 227
           NL    +WHRI    + L     + L K   VY+EG ++TR ++D+     K   EI   
Sbjct: 46  NLQERTEWHRIVAWGK-LADICSQYLKKGRQVYIEGRLQTRSWDDNKTGDKKYATEIVCT 104

Query: 228 FDGKIHLVQSGG 263
               +    SGG
Sbjct: 105 DMQMLGAKDSGG 116
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>SSB_YERPE (Q8ZJ06) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 182

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ +  + L   A   L K + VY+EG ++TR + D  +   +   E+ V   G + 
Sbjct: 54  EWHRVVLFGK-LAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQ 111

Query: 246 LV---QSGG 263
           ++   Q GG
Sbjct: 112 MLGGRQGGG 120
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>SSB_PSESM (Q889U1) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 189

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+++  + +   A   L K + VY+EG ++TR +  D   + +   EI V   G + 
Sbjct: 53  EWHRVSMFGK-VAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQ 109

Query: 246 LV 251
           L+
Sbjct: 110 LL 111
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>SSB_VIBCH (Q9KUW2) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 177

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ ++ + L   A   L K + VY+EG ++TR + D
Sbjct: 54  EWHRVTLYGK-LAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
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>SSB_VIBVU (Q8DCJ0) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 179

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ ++ + L   A   L K + VY+EG ++TR + D
Sbjct: 54  EWHRVTLYGK-LAEVAGEYLRKGSQVYIEGQLQTRKWQD 91
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>SSB_PROVU (Q8L2A6) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 195

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+ +  + L       + K + +Y+EG ++TR + D    + K   E+ V   G + 
Sbjct: 54  EWHRVVLFGK-LAEITGEFVKKGSQIYIEGALQTRKWTDQA-GVEKYTTEVVVNVGGTMQ 111

Query: 246 LV--QSGGTD 269
           ++  + GG D
Sbjct: 112 MLGGRQGGND 121
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>SSB_RALEU (P59927) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 188

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+++  + L   A + L K ++VY+EG I TR + D
Sbjct: 52  EWHRVSMFGK-LAEIAGQYLRKGSSVYIEGRIRTRKWQD 89
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>SSB_VIBPA (Q87LA3) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 176

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ +  + L   A   L K + VYVEG ++TR + D
Sbjct: 54  EWHRVVLFGK-LAEVAGEYLRKGSQVYVEGQLQTRKWQD 91
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>SSB_PSEPK (Q88QK5) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 181

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/62 (27%), Positives = 33/62 (53%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+++  + +   A   L K +  Y+EG ++TR +  D   + +   EI V  +G + 
Sbjct: 53  EWHRVSLFGK-VAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGTMQ 109

Query: 246 LV 251
           L+
Sbjct: 110 LL 111
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>SSB_RAT (P28042) Single-stranded DNA-binding protein, mitochondrial|
           precursor (Mt-SSB) (MtSSB) (P16)
          Length = 151

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           WHRI+V    L   A + + K A ++VEG ++   Y D  N
Sbjct: 84  WHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124
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>SSB_MOUSE (Q9CYR0) Single-stranded DNA-binding protein, mitochondrial|
           precursor (Mt-SSB) (MtSSB)
          Length = 152

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           WHRI+V    L   A + + K A ++VEG ++   Y D  N
Sbjct: 84  WHRISVFRPGLRDVAYQYVKKGARIFVEGKVDYGEYMDKNN 124
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>SSB_BACTN (Q8A7M7) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 161

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 51  LPMPAQWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICV 224
           +P   +WH I   N  L     + + K   +Y+EG I TR Y+D  +  ++ + EI V
Sbjct: 47  IPERTEWHNIVASNR-LAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFV 102
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>SSB_HUMAN (Q04837) Single-stranded DNA-binding protein, mitochondrial|
           precursor (Mt-SSB) (MtSSB) (PWP1-interacting protein 17)
          Length = 148

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           WHRI+V    L   A + + K + +Y+EG I+   Y D  N
Sbjct: 84  WHRISVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
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>SSBW_PSEPU (Q8VMM4) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 180

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDINNLVKIVPEICVRFDGKIH 245
           +WHR+++  + +   A   L K +  Y+EG ++TR +  D   + +   EI V   G + 
Sbjct: 53  EWHRVSLFGK-VAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQ 109

Query: 246 LV 251
           L+
Sbjct: 110 LL 111
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>SSBS_XENLA (P09380) Single-stranded DNA-binding protein S, mitochondrial|
           precursor (Mt-SSB-S) (Mt-SSB 1)
          Length = 146

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           WHRI+V    L   A + + K A + VEG I+   Y D  N
Sbjct: 83  WHRISVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTDKNN 123
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>SSBR_XENLA (P09381) Single-stranded DNA-binding protein R, mitochondrial|
           precursor (Mt-SSB-R) (Mt-SSB 2)
          Length = 148

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           WHR++V    L   A + + K A + VEG I+   Y D  N
Sbjct: 85  WHRVSVFRPGLRDVAYQHVKKGARLLVEGKIDYGEYTDKNN 125
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>SSB_NITEU (Q82S98) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 149

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDDIN 191
           +WHR+ +  +     A   L K + +Y+EG ++TR + D  N
Sbjct: 51  EWHRVVMFGKQ-AEIAGEYLKKGSQIYIEGRLQTRKWTDKSN 91
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>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 238

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 66  QWHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYND 182
           +WHR+ +  + L       L K + VY+EG ++TR + D
Sbjct: 53  EWHRVVLFGK-LAEITGEYLRKGSQVYLEGKLQTRKWKD 90
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>RIM1_YEAST (P32445) Single-stranded DNA-binding protein RIM1, mitochondrial|
           precursor (Mitochondrial ssDNA-binding protein)
          Length = 135

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 69  WHRIAVHNEHLGTYAVRKLVKNAAVYVEGDIETRVYNDD 185
           W+ I V NE    +    + K A VYVE D    V+  D
Sbjct: 60  WYNITVFNEPQINFLTEYVRKGALVYVEADAANYVFERD 98
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>XPR6_YARLI (P42781) Dibasic-processing endoprotease precursor (EC 3.4.21.-)|
          Length = 976

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +1

Query: 262 ALMSANHWKS*GRGYFSCDLRNNEQQE--ELANWSVS 366
           A MS  HW   G G +   + N  +Q+  EL NW ++
Sbjct: 694 AFMSVAHWADEGEGDWELTVENTGEQDQVELVNWQLN 730


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,168,687
Number of Sequences: 219361
Number of extensions: 1204640
Number of successful extensions: 3040
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3039
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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