ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5i14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
2gb|AY107846.1| Zea mays PCO073825 mRNA sequence 107 3e-20
3ref|XM_475681.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
4dbj|AK073396.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
6emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4,... 98 3e-17
7dbj|AB242851.1| Quercus mongolica var. crispula DNA, microsatell... 66 1e-07
8gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
9gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
11gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete s... 56 1e-04
12gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-4... 56 1e-04
13ref|NM_117176.2| Arabidopsis thaliana single-stranded DNA bindin... 46 0.10
14emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, ... 46 0.10
15emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BA... 46 0.10
16emb|AJ582222.1|ATH582222 Arabidopsis thaliana mRNA for single-st... 46 0.10
17gb|BT005015.1| Arabidopsis thaliana clone U20710 unknown protein... 46 0.10
18gb|BT004166.1| Arabidopsis thaliana clone RAFL15-18-E17 (R20710)... 46 0.10
19gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 46 0.10
20gb|AE014133.1| Streptococcus mutans UA159, complete genome 44 0.41
21gb|AC151795.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 6.4
22gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, co... 40 6.4
23ref|XM_954708.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
24ref|XM_331155.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.4
25gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, com... 40 6.4
26emb|AL596109.6| Human DNA sequence from clone RP11-695D11 on chr... 40 6.4
27emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on ch... 40 6.4
28emb|AL392003.11| Human DNA sequence from clone RP11-331H2 on chr... 40 6.4
29gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, compl... 40 6.4
30dbj|AK143537.1| Mus musculus 12 days embryo whole body cDNA, RIK... 40 6.4
31dbj|AK147610.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.4
32ref|XM_395007.2| PREDICTED: Apis mellifera similar to hect (homo... 40 6.4
33gb|AC027691.13|AC027691 Homo sapiens chromosome 1 clone RP11-287... 40 6.4
34emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 ... 40 6.4
35gb|AF111169.2|AF111169 Homo sapiens chromosome 14 BAC containing... 40 6.4
36gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, comp... 40 6.4

>dbj|AK070144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C16, full
            insert sequence
          Length = 1992

 Score =  180 bits (91), Expect = 3e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                        
Query: 37   taggtgctgaaaacctgccaatgccagctcagtggcatcgcatagctgttcataatgagc 96
            |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 1028 taggtgctgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagc 1087

                                                                        
Query: 97   accttggtacatatgctgttcgaaagttggttaagaatgctgcagtctatgttgagggtg 156
            | |||||| ||| ||| ||||  ||||| || |||||| |||||||||| ||||||||||
Sbjct: 1088 agcttggtgcatttgccgttcagaagttagtcaagaattctgcagtctacgttgagggtg 1147

                                                                        
Query: 157  atattgagactagagtctacaatgatgacatcaataatctagtgaaaattgtacctgaga 216
            |||||||||| ||||||||||||||    || ||| ||| |||||||| | |||| ||||
Sbjct: 1148 atattgagaccagagtctacaatgacagaattaatgatcaagtgaaaaatataccagaga 1207

                       
Query: 217  tctgtgtgcgg 227
            |||||||||||
Sbjct: 1208 tctgtgtgcgg 1218



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 274  gcaaatcattggaagagttaaggga 298
            ||||||||||||| |||||||||||
Sbjct: 1562 gcaaatcattggaggagttaaggga 1586



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>gb|AY107846.1| Zea mays PCO073825 mRNA sequence
          Length = 1105

 Score =  107 bits (54), Expect = 3e-20
 Identities = 171/210 (81%)
 Strand = Plus / Plus

                                                                       
Query: 52  tgccaatgccagctcagtggcatcgcatagctgttcataatgagcaccttggtacatatg 111
           |||||| ||||||||||||||| ||||||||||| ||||||||  || |  || | ||||
Sbjct: 605 tgccaaagccagctcagtggcaccgcatagctgtccataatgactacttaagtgcttatg 664

                                                                       
Query: 112 ctgttcgaaagttggttaagaatgctgcagtctatgttgagggtgatattgagactagag 171
           ||||||  ||| |||| |||||| |||| ||||||||||||||||||||||| || || |
Sbjct: 665 ctgttcagaagctggtgaagaattctgctgtctatgttgagggtgatattgaaaccaggg 724

                                                                       
Query: 172 tctacaatgatgacatcaataatctagtgaaaattgtacctgagatctgtgtgcggtttg 231
           ||||||||||     | ||| ||| ||| ||||   |||||||||| ||||| ||   ||
Sbjct: 725 tctacaatgacagtgttaatgatcaagtcaaaaacatacctgagatatgtgttcgacgtg 784

                                         
Query: 232 atggcaagatacacttggttcaatctgggg 261
           |||||||||| || |||||| |||||||||
Sbjct: 785 atggcaagattcaattggttaaatctgggg 814



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>ref|XM_475681.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 621

 Score =  101 bits (51), Expect = 2e-18
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                       
Query: 51  ctgccaatgccagctcagtggcatcgcatagctgttcataatgagcaccttggtacatat 110
           ||||||| |||||||||||||||||| |||||  |||||||||| || || ||| | | |
Sbjct: 361 ctgccaaagccagctcagtggcatcggatagccattcataatgaccagctaggtgctttt 420

                                                                       
Query: 111 gctgttcgaaagttggttaagaatgctgcagtctatgttgagggtgatattgagactaga 170
           ||||| |  ||| |||| |||||| ||||||| |||||||||||||||||||| || |||
Sbjct: 421 gctgtccagaagctggtgaagaattctgcagtttatgttgagggtgatattgaaaccaga 480

                      
Query: 171 gtctacaatga 181
           || ||||||||
Sbjct: 481 gtatacaatga 491



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>dbj|AK073396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045F21, full
           insert sequence
          Length = 1107

 Score =  101 bits (51), Expect = 2e-18
 Identities = 111/131 (84%)
 Strand = Plus / Plus

                                                                       
Query: 51  ctgccaatgccagctcagtggcatcgcatagctgttcataatgagcaccttggtacatat 110
           ||||||| |||||||||||||||||| |||||  |||||||||| || || ||| | | |
Sbjct: 605 ctgccaaagccagctcagtggcatcggatagccattcataatgaccagctaggtgctttt 664

                                                                       
Query: 111 gctgttcgaaagttggttaagaatgctgcagtctatgttgagggtgatattgagactaga 170
           ||||| |  ||| |||| |||||| ||||||| |||||||||||||||||||| || |||
Sbjct: 665 gctgtccagaagctggtgaagaattctgcagtttatgttgagggtgatattgaaaccaga 724

                      
Query: 171 gtctacaatga 181
           || ||||||||
Sbjct: 725 gtatacaatga 735



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                            
Query: 37       taggtgctgaaaacctgccaatgccagctcagtggcatcgcatagctgttcataatgagc 96
                |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 17503027 taggtgctgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagc 17502968

                                     
Query: 97       accttggtacatatgctgttc 117
                | |||||| ||| ||| ||||
Sbjct: 17502967 agcttggtgcatttgccgttc 17502947



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                            
Query: 136      ctgcagtctatgttgagggtgatattgagactagagtctacaatgatgacatcaataatc 195
                |||||||||| |||||||||||||||||||| ||||||||||||||    || ||| |||
Sbjct: 17502820 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 17502761

                                                
Query: 196      tagtgaaaattgtacctgagatctgtgtgcgg 227
                 |||||||| | |||| |||||||||||||||
Sbjct: 17502760 aagtgaaaaatataccagagatctgtgtgcgg 17502729



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>emb|AL662974.3|OSJN00171 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061G20,
              complete sequence
          Length = 191218

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                          
Query: 37     taggtgctgaaaacctgccaatgccagctcagtggcatcgcatagctgttcataatgagc 96
              |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 161793 taggtgctgaaaacttgccaatgccagctcagtggcatcgaatatctgttcacaatgagc 161734

                                   
Query: 97     accttggtacatatgctgttc 117
              | |||||| ||| ||| ||||
Sbjct: 161733 agcttggtgcatttgccgttc 161713



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                          
Query: 136    ctgcagtctatgttgagggtgatattgagactagagtctacaatgatgacatcaataatc 195
              |||||||||| |||||||||||||||||||| ||||||||||||||    || ||| |||
Sbjct: 161586 ctgcagtctacgttgagggtgatattgagaccagagtctacaatgacagaattaatgatc 161527

                                              
Query: 196    tagtgaaaattgtacctgagatctgtgtgcgg 227
               |||||||| | |||| |||||||||||||||
Sbjct: 161526 aagtgaaaaatataccagagatctgtgtgcgg 161495



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>dbj|AB242851.1| Quercus mongolica var. crispula DNA, microsatellite marker: bcqm50
          Length = 927

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                
Query: 139 cagtctatgttgagggtgatattgagactagagtctacaatgatgacatcaat 191
           |||| ||||||||||| ||||||||||||||||| |||||||||  |||||||
Sbjct: 202 cagtttatgttgagggggatattgagactagagtttacaatgatagcatcaat 254



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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17,
              complete sequence
          Length = 139829

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 136    ctgcagtctatgttgagggtgatattgagactagagtctacaatga 181
              ||||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 126516 ctgcagtttatgttgagggtgatattgaaaccagagtatacaatga 126471



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 51     ctgccaatgccagctcagtggcatcgcatagctgttcataatga 94
              ||||||| |||||||||||||||||| |||||  ||||||||||
Sbjct: 126738 ctgccaaagccagctcagtggcatcggatagccattcataatga 126695



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>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1005_B11, complete sequence
          Length = 162772

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 136 ctgcagtctatgttgagggtgatattgagactagagtctacaatga 181
           ||||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 318 ctgcagtttatgttgagggtgatattgaaaccagagtatacaatga 273



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 51  ctgccaatgccagctcagtggcatcgcatagctgttcataatga 94
           ||||||| |||||||||||||||||| |||||  ||||||||||
Sbjct: 540 ctgccaaagccagctcagtggcatcggatagccattcataatga 497



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 136      ctgcagtctatgttgagggtgatattgagactagagtctacaatga 181
                ||||||| |||||||||||||||||||| || ||||| ||||||||
Sbjct: 25057663 ctgcagtttatgttgagggtgatattgaaaccagagtatacaatga 25057618



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 51       ctgccaatgccagctcagtggcatcgcatagctgttcataatga 94
                ||||||| |||||||||||||||||| |||||  ||||||||||
Sbjct: 25057885 ctgccaaagccagctcagtggcatcggatagccattcataatga 25057842



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>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence
          Length = 125707

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 139    cagtctatgttgagggtgatattgagactagagtctacaatgat 182
              |||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 106698 cagtgtatgttgagggtgaaattgagactagagtttataatgat 106741



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 63     gctcagtggcatcgcatagctgttcataatga 94
              ||||||||||||||||| ||||| ||||||||
Sbjct: 106538 gctcagtggcatcgcattgctgtgcataatga 106569



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>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete
             sequence
          Length = 106951

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 139   cagtctatgttgagggtgatattgagactagagtctacaatgat 182
             |||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 96651 cagtgtatgttgagggtgaaattgagactagagtttataatgat 96608



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 63    gctcagtggcatcgcatagctgttcataatga 94
             ||||||||||||||||| ||||| ||||||||
Sbjct: 96811 gctcagtggcatcgcattgctgtgcataatga 96780



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>ref|NM_117176.2| Arabidopsis thaliana single-stranded DNA binding AT4G11060 mRNA,
           complete cds
          Length = 1004

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 144 tatgttgagggtgatattgagactagagtctacaatgat 182
           ||||| || |||||||||||||||||||| || ||||||
Sbjct: 604 tatgtggaaggtgatattgagactagagtgtataatgat 642



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>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30
          Length = 198136

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 144    tatgttgagggtgatattgagactagagtctacaatgat 182
              ||||| || |||||||||||||||||||| || ||||||
Sbjct: 192519 tatgtggaaggtgatattgagactagagtgtataatgat 192481



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>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project)
          Length = 108598

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 144   tatgttgagggtgatattgagactagagtctacaatgat 182
             ||||| || |||||||||||||||||||| || ||||||
Sbjct: 26916 tatgtggaaggtgatattgagactagagtgtataatgat 26878



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>emb|AJ582222.1|ATH582222 Arabidopsis thaliana mRNA for single-stranded DNA binding protein
           (ssb gene)
          Length = 652

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 144 tatgttgagggtgatattgagactagagtctacaatgat 182
           ||||| || |||||||||||||||||||| || ||||||
Sbjct: 439 tatgtggaaggtgatattgagactagagtgtataatgat 477



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>gb|BT005015.1| Arabidopsis thaliana clone U20710 unknown protein (At4g11060) mRNA,
           complete cds
          Length = 637

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 144 tatgttgagggtgatattgagactagagtctacaatgat 182
           ||||| || |||||||||||||||||||| || ||||||
Sbjct: 439 tatgtggaaggtgatattgagactagagtgtataatgat 477



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>gb|BT004166.1| Arabidopsis thaliana clone RAFL15-18-E17 (R20710) unknown protein
           (At4g11060) mRNA, complete cds
          Length = 1017

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 144 tatgttgagggtgatattgagactagagtctacaatgat 182
           ||||| || |||||||||||||||||||| || ||||||
Sbjct: 604 tatgtggaaggtgatattgagactagagtgtataatgat 642



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>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3
          Length = 74406

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 144   tatgttgagggtgatattgagactagagtctacaatgat 182
             ||||| || |||||||||||||||||||| || ||||||
Sbjct: 66438 tatgtggaaggtgatattgagactagagtgtataatgat 66476



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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 84      gttcataatgagcaccttggtacata 109
               |||||||||||||| |||||||||||
Sbjct: 1532221 gttcataatgagcagcttggtacata 1532246



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>gb|AC151795.1| Ornithorhynchus anatinus chromosome UNK clone OABb-95A1, complete
             sequence
          Length = 106226

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    gagaggttaggtgctgaaaa 49
             ||||||||||||||||||||
Sbjct: 78603 gagaggttaggtgctgaaaa 78584



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>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence
          Length = 207024

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   tggaagagttaagggagggg 302
             ||||||||||||||||||||
Sbjct: 95752 tggaagagttaagggagggg 95771



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>ref|XM_954708.1| Neurospora crassa OR74A hypothetical protein (NCU02380.1) partial
           mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 326 acaatgagcagcaggaggagttggccaa 353
           |||| ||||||||||||||| |||||||
Sbjct: 191 acaaggagcagcaggaggagctggccaa 218



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>ref|XM_331155.1| Neurospora crassa OR74A hypothetical protein (NCU02380.1) partial
           mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 326 acaatgagcagcaggaggagttggccaa 353
           |||| ||||||||||||||| |||||||
Sbjct: 191 acaaggagcagcaggaggagctggccaa 218



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>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence
          Length = 158391

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tgaaaacctgccaatgccag 63
            ||||||||||||||||||||
Sbjct: 4773 tgaaaacctgccaatgccag 4754



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>emb|AL596109.6| Human DNA sequence from clone RP11-695D11 on chromosome 1, complete
             sequence
          Length = 82965

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    gctgaaaacctgccaatgcc 61
             ||||||||||||||||||||
Sbjct: 16725 gctgaaaacctgccaatgcc 16744



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>emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on chromosome 13 Contains the
              5' end of the gene for mitotic control protein
              (DIS3,KIAA1008), the 5' end of the gene for
              progesterone-induced blocking factor 1 (PIBF1) and a CpG
              island, complete sequence
          Length = 155270

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    caagtttgccaaagcacttt 392
              ||||||||||||||||||||
Sbjct: 100731 caagtttgccaaagcacttt 100712



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>emb|AL392003.11| Human DNA sequence from clone RP11-331H2 on chromosome 1 Containt the
             3' end of the HSD17B7 gene for hydroxysteroid (17-beta)
             dehydrogenase 7, a novel protein (MGC48998) and a
             cytochrome c oxidase subunit VIIb (COX7B) pseudogene,
             complete sequence
          Length = 191872

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   gtttgccaaagcacttttat 395
             ||||||||||||||||||||
Sbjct: 23676 gtttgccaaagcacttttat 23657



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>gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, complete sequence
          Length = 197701

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    ctgggggcactgatgtcagc 275
              ||||||||||||||||||||
Sbjct: 114321 ctgggggcactgatgtcagc 114340



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>dbj|AK143537.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:E970016M14 product:hypothetical
            Proline-rich region profile containing protein, full
            insert sequence
          Length = 4792

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  tggaagagttaagggagggg 302
            ||||||||||||||||||||
Sbjct: 2612 tggaagagttaagggagggg 2593



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>dbj|AK147610.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1088M20 product:hypothetical protein, full
            insert sequence
          Length = 9711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 283  tggaagagttaagggagggg 302
            ||||||||||||||||||||
Sbjct: 7296 tggaagagttaagggagggg 7277



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>ref|XM_395007.2| PREDICTED: Apis mellifera similar to hect (homologous to the E6-AP
            (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like
            domain (RLD) 2 (LOC411536), partial mRNA
          Length = 11240

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  acaatgatgacatcaataat 194
            ||||||||||||||||||||
Sbjct: 2008 acaatgatgacatcaataat 2027



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>gb|AC027691.13|AC027691 Homo sapiens chromosome 1 clone RP11-287O16, complete sequence
          Length = 175977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    gctgaaaacctgccaatgcc 61
             ||||||||||||||||||||
Sbjct: 75254 gctgaaaacctgccaatgcc 75235



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>emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 in linkage group 1,
             complete sequence
          Length = 204799

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 178   atgatgacatcaataatctagtgaaaat 205
             |||||||| ||||||||||||| |||||
Sbjct: 80560 atgatgacttcaataatctagttaaaat 80587



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>gb|AF111169.2|AF111169 Homo sapiens chromosome 14 BAC containing gene for KIAA0759 and other
              possible new transcripts, complete sequence
          Length = 183916

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     gccagctcagtggcatcgca 78
              ||||||||||||||||||||
Sbjct: 149471 gccagctcagtggcatcgca 149452



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>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence
          Length = 192734

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tgaaaacctgccaatgccag 63
              ||||||||||||||||||||
Sbjct: 144011 tgaaaacctgccaatgccag 143992


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,887,071
Number of Sequences: 3902068
Number of extensions: 3887071
Number of successful extensions: 73992
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73861
Number of HSP's gapped (non-prelim): 127
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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