| Clone Name | bags5i04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192055.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 311 bits (157), Expect = 1e-81 Identities = 398/479 (83%), Gaps = 12/479 (2%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 |||||||||||||||||||||| || || |||||||| || |||||||| |||||||||| Sbjct: 311 gcaacttcgacgcctgccgcgatatcaacggccgccgcctgcgccacgttaacgccgagc 370 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 |||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||| Sbjct: 371 gccgcctcgaggagtggaaggccgaggccgcagatcgccagctcgagaagctcgcggagg 430 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcggccggcctgccgaggtcg 180 | ||| ||||||||||||| || || | || ||||| || | | | |||||||| | Sbjct: 431 atttcatcaagaagaaggctaaggaagcgggtcgcggtggtgtgaaggcggccgaggtgg 490 Query: 181 acaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagt 240 |||| |||||||||||||||||||||||||| ||||| ||||| || || || ||||||| Sbjct: 491 acaaatacctcgagaagtaccgcaaggatgccgagagttgcgttaatgcggttgaggagt 550 Query: 241 ccgtacgtgcctcccttgggaagaggaaggctgtccccaagccacgtg---------atg 291 | || || ||||| ||||||||||||||| | || ||||||||||| | ||| Sbjct: 551 ctgtgcgcgcctctcttgggaagaggaagaccgtgcccaagccacgcggtggggaagatg 610 Query: 292 caaagaagcttaaaatttggatgggcaagaagaaagttgcagatgatgagagtgatagtg 351 | ||||||||||| |||||| ||||||||||||| || ||| |||||||||||||| | Sbjct: 611 ccaagaagcttaagatttggctgggcaagaagaaggtacaagaggatgagagtgatagcg 670 Query: 352 acagtgacagtgatgtggatggtaatgagggtgcggatgcaaaacccgtagctcttgatc 411 | ||||||||||| |||||| | |||||||||| ||| ||||| || || ||||||| Sbjct: 671 atagtgacagtgaaatggatgatgatgagggtgcagatacaaaatccataattcttgatg 730 Query: 412 atgggaattgctcaaatggatccaacgaaagtgaggaggagaagattgatctggcttca 470 ||||||||| ||| ||||||||| |||||||||| |||||| ||||||||| |||| Sbjct: 731 atgggaattcctcgcatggatcca---aaagtgaggacgagaaggttgatctgggttca 786
>dbj|AK067869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128I02, full insert sequence Length = 1585 Score = 303 bits (153), Expect = 3e-79 Identities = 397/479 (82%), Gaps = 12/479 (2%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 |||||||||||||||||||||| || || |||||||| || |||||||| |||||||||| Sbjct: 406 gcaacttcgacgcctgccgcgatatcaacggccgccgcctgcgccacgttaacgccgagc 465 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 |||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||| Sbjct: 466 gccgcctcgaggagtggaaggccgaggccgcagatcgccagctcgagaagctcgcggagg 525 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcggccggcctgccgaggtcg 180 | ||| ||||||||||||| || || | || ||||| || | | | |||||||| | Sbjct: 526 atttcatcaagaagaaggctaaggaagcgggtcgcggtggtgtgaaggcggccgaggtgg 585 Query: 181 acaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagt 240 |||| |||||||||||||||||||||||||| ||||| ||||| || || || ||||||| Sbjct: 586 acaaatacctcgagaagtaccgcaaggatgccgagagttgcgttaatgcggttgaggagt 645 Query: 241 ccgtacgtgcctcccttgggaagaggaaggctgtccccaagccacgtg---------atg 291 | || || ||||| ||||||||||||||| | || ||||||||||| | ||| Sbjct: 646 ctgtgcgcgcctctcttgggaagaggaagaccgtgcccaagccacgcggtggggaagatg 705 Query: 292 caaagaagcttaaaatttggatgggcaagaagaaagttgcagatgatgagagtgatagtg 351 | ||||||||||| |||||| ||||||||||||| || ||| |||||||||||||| | Sbjct: 706 ccaagaagcttaagatttggctgggcaagaagaaggtacaagaggatgagagtgatagcg 765 Query: 352 acagtgacagtgatgtggatggtaatgagggtgcggatgcaaaacccgtagctcttgatc 411 | ||||||| ||| |||||| | |||||||||| ||| ||||| || || ||||||| Sbjct: 766 atagtgacactgaaatggatgatgatgagggtgcagatacaaaatccataattcttgatg 825 Query: 412 atgggaattgctcaaatggatccaacgaaagtgaggaggagaagattgatctggcttca 470 ||||||||| ||| ||||||||| |||||||||| |||||| ||||||||| |||| Sbjct: 826 atgggaattcctcgcatggatcca---aaagtgaggacgagaaggttgatctgggttca 881
>dbj|AK066431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064N11, full insert sequence Length = 1175 Score = 303 bits (153), Expect = 3e-79 Identities = 397/479 (82%), Gaps = 12/479 (2%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 |||||||||||||||||||||| || || |||||||| || |||||||| |||||||||| Sbjct: 421 gcaacttcgacgcctgccgcgatatcaacggccgccgcctgcgccacgttaacgccgagc 480 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 |||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||| Sbjct: 481 gccgcctcgaggagtggaaggccgaggccgcagatcgccagctcgagaagctcgcggagg 540 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcggccggcctgccgaggtcg 180 | ||| ||||||||||||| || || | || ||||| || | | | |||||||| | Sbjct: 541 atttcatcaagaagaaggctaaggaagcgggtcgcggtggtgtgaaggcggccgaggtgg 600 Query: 181 acaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagt 240 |||| ||||||||| |||||||||||||||| ||||| ||||| || || || ||||||| Sbjct: 601 acaaatacctcgaggagtaccgcaaggatgccgagagttgcgttaatgcggttgaggagt 660 Query: 241 ccgtacgtgcctcccttgggaagaggaaggctgtccccaagccacgtg---------atg 291 | || || ||||| ||||||||||||||| | || ||||||||||| | ||| Sbjct: 661 ctgtgcgcgcctctcttgggaagaggaagaccgtgcccaagccacgcggtggggaagatg 720 Query: 292 caaagaagcttaaaatttggatgggcaagaagaaagttgcagatgatgagagtgatagtg 351 | ||||||||||| |||||| ||||||||||||| || ||| |||||||||||||| | Sbjct: 721 ccaagaagcttaagatttggctgggcaagaagaaggtacaagaggatgagagtgatagcg 780 Query: 352 acagtgacagtgatgtggatggtaatgagggtgcggatgcaaaacccgtagctcttgatc 411 | ||||||||||| |||||| | |||||||||| ||| ||||| || || ||||||| Sbjct: 781 atagtgacagtgaaatggatgatgatgagggtgcagatacaaaatccataattcttgatg 840 Query: 412 atgggaattgctcaaatggatccaacgaaagtgaggaggagaagattgatctggcttca 470 ||||||||| ||| ||||||||| |||||||||| |||||| ||||||||| |||| Sbjct: 841 atgggaattcctcgcatggatcca---aaagtgaggacgagaaggttgatctgggttca 896
>gb|AY107402.1| Zea mays PCO067211 mRNA sequence Length = 922 Score = 248 bits (125), Expect = 1e-62 Identities = 237/272 (87%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 ||||||| ||||||||||||||||| || || ||||| ||||||||||||||||| |||| Sbjct: 395 gcaactttgacgcctgccgcgacatcaacggtcgccgcctccgccacgtcaacgctgagc 454 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 ||||||||||||| |||| ||||||||||| ||| ||||| || || ||||| |||||| Sbjct: 455 gccgcctcgaggaatggaaggccgaggccggggaccgccatctagaaaagctcgccgaga 514 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcgg-ccggc--ctgccgagg 177 ||||| |||||||||||||||| ||| | |||||| ||||||| || | |||| |||| Sbjct: 515 acttcatcaagaagaaggccaaggaggcgggccgccgcggcggaccctcagctgctgagg 574 Query: 178 tcgacaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggagg 237 | ||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||| Sbjct: 575 tggacaagtacctggagaagtaccgcaaggatgctgagatctgcgtcaacgcggttgagg 634 Query: 238 agtccgtacgtgcctcccttgggaagaggaag 269 | ||||||||||| || ||||| ||||||||| Sbjct: 635 aatccgtacgtgcatctcttggaaagaggaag 666
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 242 bits (122), Expect = 9e-61 Identities = 245/286 (85%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 |||||||||||||||||||||| || || |||||||| || |||||||| |||||||||| Sbjct: 28074069 gcaacttcgacgcctgccgcgatatcaacggccgccgcctgcgccacgttaacgccgagc 28074128 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 |||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||| Sbjct: 28074129 gccgcctcgaggagtggaaggccgaggccgcagatcgccagctcgagaagctcgcggagg 28074188 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcggccggcctgccgaggtcg 180 | ||| ||||||||||||| || || | || ||||| || | | | |||||||| | Sbjct: 28074189 atttcatcaagaagaaggctaaggaagcgggtcgcggtggtgtgaaggcggccgaggtgg 28074248 Query: 181 acaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagt 240 |||| |||||||||||||||||||||||||| ||||| ||||| || || || ||||||| Sbjct: 28074249 acaaatacctcgagaagtaccgcaaggatgccgagagttgcgttaatgcggttgaggagt 28074308 Query: 241 ccgtacgtgcctcccttgggaagaggaaggctgtccccaagccacg 286 | || || ||||| ||||||||||||||| | || ||||||||||| Sbjct: 28074309 ctgtgcgcgcctctcttgggaagaggaagaccgtgcccaagccacg 28074354 Score = 95.6 bits (48), Expect = 1e-16 Identities = 131/158 (82%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 313 tgggcaagaagaaagttgcagatgatgagagtgatagtgacagtgacagtgatgtggatg 372 ||||||||||||| || ||| |||||||||||||| || ||||||||||| |||||| Sbjct: 28074887 tgggcaagaagaaggtacaagaggatgagagtgatagcgatagtgacagtgaaatggatg 28074946 Query: 373 gtaatgagggtgcggatgcaaaacccgtagctcttgatcatgggaattgctcaaatggat 432 | |||||||||| ||| ||||| || || ||||||| ||||||||| ||| |||||| Sbjct: 28074947 atgatgagggtgcagatacaaaatccataattcttgatgatgggaattcctcgcatggat 28075006 Query: 433 ccaacgaaagtgaggaggagaagattgatctggcttca 470 ||| |||||||||| |||||| ||||||||| |||| Sbjct: 28075007 cca---aaagtgaggacgagaaggttgatctgggttca 28075041 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 aggagaagattgatctggctt 468 ||||||||||||||||||||| Sbjct: 13295528 aggagaagattgatctggctt 13295548 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 42274187 aggccgcggcggcggccggc 42274168
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 242 bits (122), Expect = 9e-61 Identities = 245/286 (85%) Strand = Plus / Plus Query: 1 gcaacttcgacgcctgccgcgacataaatggccgccggctccgccacgtcaacgccgagc 60 |||||||||||||||||||||| || || |||||||| || |||||||| |||||||||| Sbjct: 89268 gcaacttcgacgcctgccgcgatatcaacggccgccgcctgcgccacgttaacgccgagc 89327 Query: 61 gccgcctcgaggagtggagggccgaggccgcggatcgccagctcgagaagcttgccgagg 120 |||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||| Sbjct: 89328 gccgcctcgaggagtggaaggccgaggccgcagatcgccagctcgagaagctcgcggagg 89387 Query: 121 acttcctcaagaagaaggccaaagagtcaggccgcggcggcggccggcctgccgaggtcg 180 | ||| ||||||||||||| || || | || ||||| || | | | |||||||| | Sbjct: 89388 atttcatcaagaagaaggctaaggaagcgggtcgcggtggtgtgaaggcggccgaggtgg 89447 Query: 181 acaagtacctcgagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagt 240 |||| |||||||||||||||||||||||||| ||||| ||||| || || || ||||||| Sbjct: 89448 acaaatacctcgagaagtaccgcaaggatgccgagagttgcgttaatgcggttgaggagt 89507 Query: 241 ccgtacgtgcctcccttgggaagaggaaggctgtccccaagccacg 286 | || || ||||| ||||||||||||||| | || ||||||||||| Sbjct: 89508 ctgtgcgcgcctctcttgggaagaggaagaccgtgcccaagccacg 89553 Score = 95.6 bits (48), Expect = 1e-16 Identities = 131/158 (82%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 313 tgggcaagaagaaagttgcagatgatgagagtgatagtgacagtgacagtgatgtggatg 372 ||||||||||||| || ||| |||||||||||||| || ||||||||||| |||||| Sbjct: 90086 tgggcaagaagaaggtacaagaggatgagagtgatagcgatagtgacagtgaaatggatg 90145 Query: 373 gtaatgagggtgcggatgcaaaacccgtagctcttgatcatgggaattgctcaaatggat 432 | |||||||||| ||| ||||| || || ||||||| ||||||||| ||| |||||| Sbjct: 90146 atgatgagggtgcagatacaaaatccataattcttgatgatgggaattcctcgcatggat 90205 Query: 433 ccaacgaaagtgaggaggagaagattgatctggcttca 470 ||| |||||||||| |||||| ||||||||| |||| Sbjct: 90206 cca---aaagtgaggacgagaaggttgatctgggttca 90240
>gb|BT017460.1| Zea mays clone EL01N0407D06.c mRNA sequence Length = 1098 Score = 157 bits (79), Expect = 4e-35 Identities = 170/198 (85%), Gaps = 3/198 (1%) Strand = Plus / Minus Query: 75 tggagggccgaggccgcggatcgccagctcgagaagcttgccgaggacttcctcaagaag 134 |||| ||||||||||| ||| ||||| || || ||||| |||||| ||||| |||||||| Sbjct: 1094 tggaaggccgaggccggggaccgccatctagaaaagctcgccgagaacttcatcaagaag 1035 Query: 135 aaggccaaagagtcaggccgcggcggcgg-ccggc--ctgccgaggtcgacaagtacctc 191 |||||||| ||| | |||||| ||||||| || | |||| ||||| ||||||||||| Sbjct: 1034 aaggccaaggaggcgggccgccgcggcggaccctcagctgctgaggtggacaagtacctg 975 Query: 192 gagaagtaccgcaaggatgctgagagctgcgtcaacgctgtggaggagtccgtacgtgcc 251 ||||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||| Sbjct: 974 gagaagtaccgcaaggatgctgagatctgcgtcaacgcggttgaggaatccgtacgtgca 915 Query: 252 tcccttgggaagaggaag 269 || ||||| ||||||||| Sbjct: 914 tctcttggaaagaggaag 897 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 294 aagaagcttaaaatttggatgggcaagaagaaagttgcagatgatgagagtgatagtgac 353 ||||||||||| |||||| |||| ||||| ||||| | ||| ||||| |||||||| || Sbjct: 863 aagaagcttaagatttggttgggtaagaacaaagtagaagaagatgaaagtgatagcgat 804 Query: 354 agtgacagtga 364 ||||||||||| Sbjct: 803 agtgacagtga 793
>gb|AE004547.1| Pseudomonas aeruginosa PAO1, section 108 of 529 of the complete genome Length = 11922 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 151 gccgcggcggcggccggcctgccga 175 ||||||||||||||||||||||||| Sbjct: 10763 gccgcggcggcggccggcctgccga 10739
>gb|AC074360.5|AC074360 Arabidopsis thaliana chromosome 1 BAC F27M3 genomic sequence, complete sequence Length = 110664 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 318 aagaagaaagttgcagatgatgag 341 |||||||||||||||||||||||| Sbjct: 74325 aagaagaaagttgcagatgatgag 74348
>gb|AC027135.6|AC027135 Arabidopsis thaliana chromosome 1 BAC T8E3 genomic sequence, complete sequence Length = 80139 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 318 aagaagaaagttgcagatgatgag 341 |||||||||||||||||||||||| Sbjct: 67769 aagaagaaagttgcagatgatgag 67746
>gb|AC145912.4| Gallus gallus BAC clone CH261-48P17 from chromosome unknown, complete sequence Length = 183092 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 |||||||||||||||||||||||| Sbjct: 64532 agtgatagtgacagtgacagtgat 64555
>dbj|AB052795.1| Arabidopsis thaliana transposon CACTA4 DNA, repeat sequences Length = 8046 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 318 aagaagaaagttgcagatgatgag 341 |||||||||||||||||||||||| Sbjct: 5135 aagaagaaagttgcagatgatgag 5158
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 151 gccgcggcggcggccggcctgcc 173 ||||||||||||||||||||||| Sbjct: 128101 gccgcggcggcggccggcctgcc 128079
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 151 gccgcggcggcggccggcctgcc 173 ||||||||||||||||||||||| Sbjct: 177232 gccgcggcggcggccggcctgcc 177254
>gb|AF320121.1|AF320121 Mycobacterium avium strain 104 gene sequence Length = 395 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 146 gtcaggccgcggcggcggccggc 168 ||||||||||||||||||||||| Sbjct: 81 gtcaggccgcggcggcggccggc 59
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 gtcaggccgcggcggcggccggc 168 ||||||||||||||||||||||| Sbjct: 1740960 gtcaggccgcggcggcggccggc 1740982
>ref|XM_636798.1| Dictyostelium discoideum hypothetical protein (DDB0215282), partial mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 336 gatgagagtgatagtgacagtgacagtgat 365 ||||| ||||||||||||||||| |||||| Sbjct: 340 gatgaaagtgatagtgacagtgatagtgat 369
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 342 agtgatagtgacagtgacagtgatgt 367 ||||| |||||||||||||||||||| Sbjct: 1742052 agtgacagtgacagtgacagtgatgt 1742027 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 337 atgagagtgatagtgacagtgacagtga 364 |||| ||||| ||||||||||||||||| Sbjct: 1742063 atgacagtgacagtgacagtgacagtga 1742036
>ref|XM_974771.1| PREDICTED: Mus musculus hypothetical protein LOC665131 (LOC665131), mRNA Length = 750 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 333 gatgatgagagtgatagtgacagtgacagtgatg 366 |||||||| |||||||||||||||| ||||||| Sbjct: 270 gatgatgatagtgatagtgacagtggtagtgatg 237 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 gatgatgagagtgatagtgacagtgacag 361 |||| ||| |||||||||||||||||||| Sbjct: 507 gatgttgatagtgatagtgacagtgacag 479 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 335 tgatgagagtgatagtgacagtgacagtgatgt 367 |||||| |||||| |||| |||||||||||||| Sbjct: 241 tgatgacagtgatggtgatagtgacagtgatgt 209
>ref|XM_001003969.1| PREDICTED: Mus musculus hypothetical protein LOC677480 (LOC677480), mRNA Length = 750 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 333 gatgatgagagtgatagtgacagtgacagtgatg 366 |||||||| |||||||||||||||| ||||||| Sbjct: 270 gatgatgatagtgatagtgacagtggtagtgatg 237 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 gatgatgagagtgatagtgacagtgacag 361 |||| ||| |||||||||||||||||||| Sbjct: 507 gatgttgatagtgatagtgacagtgacag 479 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 335 tgatgagagtgatagtgacagtgacagtgatgt 367 |||||| |||||| |||| |||||||||||||| Sbjct: 241 tgatgacagtgatggtgatagtgacagtgatgt 209
>ref|XM_505366.1| Yarrowia lipolytica CLIB122, YALI0F13277g predicted mRNA Length = 3405 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 339 gagagtgatagtgacagtgacagtgatgtggatg 372 ||||||||||| ||||| ||||||||| |||||| Sbjct: 1378 gagagtgatagcgacagcgacagtgatatggatg 1411
>dbj|AK037280.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130002P08 product:unclassifiable, full insert sequence Length = 2455 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 339 gagagtgatagtgacagtgacagtga 364 |||||||| ||||||||||||||||| Sbjct: 723 gagagtgacagtgacagtgacagtga 698
>gb|AC092718.3| Homo sapiens chromosome 16 clone RP11-303E16, complete sequence Length = 203229 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 338 tgagagtgatagtgacagtgacagtgatgtggatggtaatga 379 ||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 70212 tgagagtgataatgacaatgacagtgatgatgatggtgatga 70171
>gb|AC153614.5| Mus musculus 6 BAC RP23-344N8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205813 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 atagtgacagtgacagtgatgt 367 |||||||||||||||||||||| Sbjct: 122151 atagtgacagtgacagtgatgt 122130
>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete sequence Length = 173925 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 339 gagagtgatagtgacagtgacagtga 364 |||||||| ||||||||||||||||| Sbjct: 41506 gagagtgacagtgacagtgacagtga 41481
>emb|AL832135.1|HSM803442 Homo sapiens mRNA; cDNA DKFZp686J2110 (from clone DKFZp686J2110) Length = 5346 Score = 44.1 bits (22), Expect = 0.42 Identities = 37/42 (88%) Strand = Plus / Minus Query: 338 tgagagtgatagtgacagtgacagtgatgtggatggtaatga 379 ||||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 1361 tgagagtgataatgacaatgacagtgatgatgatggtgatga 1320
>gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, complete sequence Length = 187989 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 333 gatgatgagagtgatagtgacagtgacagtgatg 366 |||||||| |||||||||||||||| ||||||| Sbjct: 90526 gatgatgatagtgatagtgacagtggtagtgatg 90559 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 335 tgatgagagtgatagtgacagtgacagtgatgt 367 |||||| |||||| |||| |||||||||||||| Sbjct: 90555 tgatgacagtgatggtgatagtgacagtgatgt 90587 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 gatgatgagagtgatagtgacagtgacag 361 |||| ||| |||||||||||||||||||| Sbjct: 90289 gatgttgatagtgatagtgacagtgacag 90317
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Minus Query: 339 gagagtgatagtgacagtgacagtgatgtggatg 372 ||||||||||| ||||| ||||||||| |||||| Sbjct: 1779228 gagagtgatagcgacagcgacagtgatatggatg 1779195
>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence Length = 193158 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 155643 agagtgacagtgacagtgacagtga 155619
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggcc 169 ||||||||||||||||||||| Sbjct: 197926 aggccgcggcggcggccggcc 197946
>ref|XM_635698.1| Dictyostelium discoideum RNA-directed RNA polymerase (DDB0216193), partial mRNA Length = 6858 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 333 gatgatgagagtgatagtgacagtgacagtgat 365 |||||||| | ||||||||||||||| |||||| Sbjct: 1900 gatgatgaaaatgatagtgacagtgatagtgat 1932
>ref|XM_510789.1| PREDICTED: Pan troglodytes similar to Hypothetical protein AF447587 (LOC453887), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 cctgccgaggtcgacaagtac 188 ||||||||||||||||||||| Sbjct: 588 cctgccgaggtcgacaagtac 608
>ref|XM_975395.1| PREDICTED: Mus musculus hypothetical protein LOC669496 (LOC669496), mRNA Length = 594 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 333 gatgatgagagtgatagtgacagtgacag 361 |||| ||| |||||||||||||||||||| Sbjct: 406 gatgttgatagtgatagtgacagtgacag 434
>ref|XM_773600.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_39_17742_19325) partial mRNA Length = 1584 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gatagtgacagtgacagtgat 365 ||||||||||||||||||||| Sbjct: 265 gatagtgacagtgacagtgat 285
>ref|XM_727781.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403065.00.0) partial mRNA Length = 447 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 336 gatgagagtgatagtgacagtgacagtga 364 ||||| ||||||||||||||||| ||||| Sbjct: 320 gatgatagtgatagtgacagtgatagtga 348 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 350 agtgatagtgacagtgatagtgat 373
>ref|XM_503816.1| Yarrowia lipolytica CLIB122, YALI0E11363g predicted mRNA Length = 1125 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gatagtgacagtgacagtgat 365 ||||||||||||||||||||| Sbjct: 895 gatagtgacagtgacagtgat 915
>gb|AC130897.3| Homo sapiens 3 BAC RP13-1041F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 39925 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 10120 agagtgacagtgacagtgacagtga 10144
>emb|Y16780.1|VMVY16780 variola minor virus complete genome Length = 186986 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1300 agtgacagtgacagtgatgtagatg 1276
>emb|X94355.2|CV41KBPL Cowpox virus strain GRI-90, complete genome Length = 223666 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 22762 agtgacagtgacagtgatgtagatg 22738
>emb|X69198.1|VVCGAA Variola virus DNA complete genome Length = 185578 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1269 agtgacagtgacagtgatgtagatg 1245
>gb|AF482758.2| Cowpox virus strain Brighton Red, complete genome Length = 224499 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 23151 agtgacagtgacagtgatgtagatg 23127
>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence Length = 199351 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 342 agtgatagtgacagtgacagtgatg 366 ||||| ||||||||||||||||||| Sbjct: 36449 agtgacagtgacagtgacagtgatg 36425
>emb|AL954248.1| Pan troglodytes chromosome 22 clone PTB-061A04 map 22q22.3, complete sequence Length = 162730 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgatg 366 ||||||||||||||||| ||||||| Sbjct: 11870 agtgatagtgacagtgatagtgatg 11894
>gb|AC016383.11| Homo sapiens chromosome 18, clone RP11-25O3, complete sequence Length = 178624 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 gatgggcaagaagaaagttgc 331 ||||||||||||||||||||| Sbjct: 52669 gatgggcaagaagaaagttgc 52689
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ggccgcggcggcggccggcctgccg 174 ||||||||||||||||||| ||||| Sbjct: 2805 ggccgcggcggcggccggcatgccg 2829
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ggccgcggcggcggccggcctgccg 174 ||||||||||||||||||| ||||| Sbjct: 87430 ggccgcggcggcggccggcatgccg 87454
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccggc 168 ||||||||||||||||||||| Sbjct: 2194919 caggccgcggcggcggccggc 2194939 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 gctccgccacgtcaacgccgagcgccgc 65 ||||||||||||| ||||||||||||| Sbjct: 21270807 gctccgccacgtcggcgccgagcgccgc 21270834
>gb|U18340.1|VVU18340 Variola virus Somalia-1977 left variable region Length = 29539 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1524 agtgacagtgacagtgatgtagatg 1500
>gb|U18338.1|VVU18338 Variola virus Garcia-1966 left near-terminal region Length = 30288 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1300 agtgacagtgacagtgatgtagatg 1276
>gb|U18337.1|VVU18337 Variola virus Congo-1965 left near-terminal region Length = 29309 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1313 agtgacagtgacagtgatgtagatg 1289
>gb|AC140058.5| Homo sapiens 3 BAC RP13-1007C7 (Roswell park Cancer Institute Human BAC Library) complete sequence Length = 62693 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 18185 agagtgacagtgacagtgacagtga 18209
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccggc 168 ||||||||||||||||||||| Sbjct: 4676306 caggccgcggcggcggccggc 4676326
>dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, complete sequence Length = 184026 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 34 gccggctccgccacgtcaacgccgagcgc 62 ||||||||||||||||| ||||| ||||| Sbjct: 119750 gccggctccgccacgtccacgcccagcgc 119722
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 aggagaagattgatctggctt 468 ||||||||||||||||||||| Sbjct: 35886 aggagaagattgatctggctt 35906
>gb|AY103635.1| Zea mays PCO124295 mRNA sequence Length = 2074 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 59 gcgccgcctcgaggagtggagggccgaggccgc 91 |||||||||||||||| | | |||||||||||| Sbjct: 432 gcgccgcctcgaggagcgcatggccgaggccgc 464
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccggc 168 ||||||||||||||||||||| Sbjct: 2194863 caggccgcggcggcggccggc 2194883 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 gctccgccacgtcaacgccgagcgccgc 65 ||||||||||||| ||||||||||||| Sbjct: 21197016 gctccgccacgtcggcgccgagcgccgc 21197043
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccggc 168 ||||||||||||||||||||| Sbjct: 77143 caggccgcggcggcggccggc 77163
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gatagtgacagtgacagtgat 365 ||||||||||||||||||||| Sbjct: 1389804 gatagtgacagtgacagtgat 1389824
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 23104 agagtgacagtgacagtgacagtga 23080
>emb|AL121981.17|HS1061C18 Human DNA sequence from clone RP5-1061C18 on chromosome 3p36.22-36.33 Contains the 5' part of the DLG1 gene encoding the discs protein (large Drosophila homolog 1, presynaptic protein SAP97) and a CpG island, complete sequence Length = 148493 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 24478 agagtgacagtgacagtgacagtga 24454
>gb|L22579.1|VARCG Variola major virus (strain Bangladesh-1975) complete genome Length = 186103 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 agtgacagtgacagtgatgtggatg 372 |||||||||||||||||||| |||| Sbjct: 1965 agtgacagtgacagtgatgtagatg 1941
>emb|AL844219.4| Mouse DNA sequence from clone RP23-468H1 on chromosome 4, complete sequence Length = 42848 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 agagtgatagtgacagtgacagtga 364 ||||||| ||||||||||||||||| Sbjct: 9900 agagtgaaagtgacagtgacagtga 9924
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 agggccgaggccgcggatcg 97 |||||||||||||||||||| Sbjct: 3433161 agggccgaggccgcggatcg 3433142
>ref|NM_113024.2| Arabidopsis thaliana unknown protein AT3G21290 mRNA, complete cds Length = 4025 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 1676 agtgatagtgacagtgatagtgat 1699
>ref|NM_113387.2| Arabidopsis thaliana unknown protein AT3G24750 mRNA, complete cds Length = 937 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gaagaaagttgcagatgatgagag 343 ||||||||||| |||||||||||| Sbjct: 518 gaagaaagttgaagatgatgagag 541
>ref|XM_523650.1| PREDICTED: Pan troglodytes similar to keratin 17 (LOC468261), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 793 gagaagaaccgcaaggatgctgag 816
>ref|XM_632878.1| Dictyostelium discoideum hypothetical protein (DDB0186717), partial mRNA Length = 2679 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 871 agtgatagtgacagtgatagtgat 894 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||| |||||||||||| Sbjct: 865 agtgatagtgatagtgacagtgat 888
>ref|XM_639947.1| Dictyostelium discoideum hypothetical protein (DDB0167970), partial mRNA Length = 1983 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 1843 agtgatagtgacagtgatagtgat 1866 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||| |||||||||||| Sbjct: 1837 agtgatagtgatagtgacagtgat 1860
>ref|XM_639282.1| Dictyostelium discoideum hypothetical protein (DDB0217428), partial mRNA Length = 1983 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 1843 agtgatagtgacagtgatagtgat 1866 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||| |||||||||||| Sbjct: 1837 agtgatagtgatagtgacagtgat 1860
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 acgccgagcgccgcctcgag 71 |||||||||||||||||||| Sbjct: 2624956 acgccgagcgccgcctcgag 2624975
>ref|NM_189343.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 291 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 29 aggccgcggcggcggccggc 48
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 agctcgagaagcttgccgag 119 |||||||||||||||||||| Sbjct: 684934 agctcgagaagcttgccgag 684915
>gb|AY022963.1| Oryza sativa microsatellite MRG5288 containing (CTG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 184 caggccgcggcggcggccgg 165
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 971887 aggccgcggcggcggccggc 971906
>ref|NM_016958.1| Mus musculus keratin complex 1, acidic, gene 14 (Krt1-14), mRNA Length = 1680 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 959 gagaagaaccgcaaggatgctgag 982
>gb|AY659132.1| Synthetic construct Peudomonas aeruginosa clone FLH036675.01F PA4201 gene, partial cds Length = 1041 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 940 caggccgcggcggcggccgg 959
>gb|AC140278.2| Mus musculus BAC clone RP24-313J18 from chromosome 17, complete sequence Length = 180727 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 gtgatagtgacagtgacagtgatg 366 ||||| |||||||||||||||||| Sbjct: 56135 gtgatggtgacagtgacagtgatg 56112
>gb|AY459292.1| Mus musculus keratin 17n mRNA, complete cds Length = 1525 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 823 gagaagaaccgcaaggatgctgag 846
>gb|AC158586.8| Mus musculus chromosome 5, clone RP24-372A2, complete sequence Length = 196167 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gcaaggatgctgagagctgc 221 |||||||||||||||||||| Sbjct: 25723 gcaaggatgctgagagctgc 25742
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tagtgacagtgacagtgatg 366 |||||||||||||||||||| Sbjct: 4537541 tagtgacagtgacagtgatg 4537560
>gb|AY493987.1| Podocoryne carnea Cniwi (Cniwi) mRNA, complete cds Length = 2843 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agaagaaagttgcagatgat 338 |||||||||||||||||||| Sbjct: 1148 agaagaaagttgcagatgat 1167
>ref|XM_567710.1| Cryptococcus neoformans var. neoformans JEC21 aldehyde reductase i (CNK02370) partial mRNA Length = 1151 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 agctcgagaagcttgccgag 119 |||||||||||||||||||| Sbjct: 898 agctcgagaagcttgccgag 917
>gb|AC125402.3| Mus musculus BAC clone RP24-539G2 from chromosome 5, complete sequence Length = 163773 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gcaaggatgctgagagctgc 221 |||||||||||||||||||| Sbjct: 80939 gcaaggatgctgagagctgc 80920
>gb|BC003325.1| Mus musculus keratin complex 1, acidic, gene 14, mRNA (cDNA clone MGC:7044 IMAGE:3156333), complete cds Length = 1136 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 421 gagaagaaccgcaaggatgctgag 444
>gb|BT010632.1| Arabidopsis thaliana At3g24750 gene, complete cds Length = 492 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gaagaaagttgcagatgatgagag 343 ||||||||||| |||||||||||| Sbjct: 251 gaagaaagttgaagatgatgagag 274
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gatgatgagagtgatagtga 352 |||||||||||||||||||| Sbjct: 26256 gatgatgagagtgatagtga 26237
>ref|XM_785897.1| PREDICTED: Strongylocentrotus purpuratus similar to PHD finger protein 14 (LOC586102), partial mRNA Length = 1830 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 gagtgatagtgacagtgacagtga 364 |||||||||||||||||| ||||| Sbjct: 117 gagtgatagtgacagtgatagtga 140
>emb|AL049549.3|HS64I15 Human DNA sequence from clone RP1-64I15 on chromosome 6q21-22.33, complete sequence Length = 70935 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtgacagtgacagtgatgtg 368 |||||||||||||||||||| Sbjct: 7064 gtgacagtgacagtgatgtg 7083
>gb|AY039927.1| Arabidopsis thaliana unknown protein (At3g21290) mRNA, complete cds Length = 4041 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 1675 agtgatagtgacagtgatagtgat 1698
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 287601 aggccgcggcggcggccggc 287620
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 75041 aggccgcggcggcggccggc 75060
>gb|AC153815.7| Mus musculus 6 BAC RP23-205F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230983 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 cttgggaagaggaaggctgtcccc 278 ||||||||||||||||| |||||| Sbjct: 48503 cttgggaagaggaaggcagtcccc 48526
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 305340 aggccgcggcggcggccggc 305359
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 tgggaattgctcaaatggatccaa 436 ||||||||||||||| |||||||| Sbjct: 49708 tgggaattgctcaaaaggatccaa 49685
>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14, complete sequence Length = 189425 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgtggatggtaatgagggtg 384 |||||||||||||||||||| Sbjct: 140953 tgtggatggtaatgagggtg 140934
>gb|AC006429.4| Arabidopsis thaliana chromosome 2 clone F15K19 map mi421, complete sequence Length = 94875 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 aagaagaaagttgcagatgatgag 341 ||||||||||||| |||||||||| Sbjct: 80249 aagaagaaagttgtagatgatgag 80226
>dbj|AK019133.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410129K01 product:similar to RADIATED KERATINOCYTE MRNA 266 (KERATIN-RELATED PROTEIN) (FRAGMENT) [Homo sapiens], full insert sequence Length = 1003 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 285 gagaagaaccgcaaggatgctgag 308
>dbj|AK019115.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410039E07 product:similar to RADIATED KERATINOCYTE MRNA 266 (KERATIN-RELATED PROTEIN) (FRAGMENT) [Homo sapiens], full insert sequence Length = 1064 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 339 gagaagaaccgcaaggatgctgag 362
>gb|BC011074.1| Mus musculus keratin complex 1, acidic, gene 14, mRNA (cDNA clone MGC:18920 IMAGE:3497492), complete cds Length = 1680 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 959 gagaagaaccgcaaggatgctgag 982
>ref|NM_212483.1| Mus musculus RIKEN cDNA 2410039E07 gene (2410039E07Rik), mRNA Length = 1525 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 823 gagaagaaccgcaaggatgctgag 846
>tpg|BK004025.1| TPA: TPA_exp: Mus musculus type I keratin KA22 (Ka22) mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 823 gagaagaaccgcaaggatgctgag 846
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gccgcggcggcggccggcctgccg 174 ||||| |||||||||||||||||| Sbjct: 2830414 gccgccgcggcggccggcctgccg 2830437
>dbj|AK033619.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130202J21 product:unclassifiable, full insert sequence Length = 3065 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 taaaatttggatgggcaaga 321 |||||||||||||||||||| Sbjct: 2185 taaaatttggatgggcaaga 2204
>dbj|AK029928.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932407I05 product:unclassifiable, full insert sequence Length = 3949 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 gtgatagtgacagtgacagtgatg 366 ||||| |||||||||||||||||| Sbjct: 2367 gtgatggtgacagtgacagtgatg 2344
>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8, complete sequence Length = 168607 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgtggatggtaatgagggtg 384 |||||||||||||||||||| Sbjct: 107340 tgtggatggtaatgagggtg 107321
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 2153167 caggccgcggcggcggccgg 2153186
>ref|XM_392385.2| PREDICTED: Apis mellifera similar to CG7404-PA, isoform A (LOC408855), mRNA Length = 3054 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gatgatgagagtgatagtga 352 |||||||||||||||||||| Sbjct: 2973 gatgatgagagtgatagtga 2992
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tagtgacagtgacagtgatg 366 |||||||||||||||||||| Sbjct: 4537656 tagtgacagtgacagtgatg 4537675
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tagtgacagtgacagtgatg 366 |||||||||||||||||||| Sbjct: 142833 tagtgacagtgacagtgatg 142852
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 26195 agtgatagtgacagtgatagtgat 26218
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence Length = 541399 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||| |||||||||||| Sbjct: 79921 agtgatagtgatagtgacagtgat 79898 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 79915 agtgatagtgacagtgatagtgat 79892
>gb|AC084636.1|CBRG45H19 Caenorhabditis briggsae cosmid G45H19, complete sequence Length = 38299 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 415 ggaattgctcaaatggatccaacg 438 ||||||||||| |||||||||||| Sbjct: 22082 ggaattgctcatatggatccaacg 22105
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 46144 aggccgcggcggcggccggc 46125
>gb|AC012493.9| Homo sapiens BAC clone RP11-292K15 from 2, complete sequence Length = 170404 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tgggcaagaagaaagttgca 332 |||||||||||||||||||| Sbjct: 86826 tgggcaagaagaaagttgca 86845
>gb|AE004836.1| Pseudomonas aeruginosa PAO1, section 397 of 529 of the complete genome Length = 11127 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 8954 caggccgcggcggcggccgg 8935
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 gtgatagtgacagtgacagtgatg 366 ||||| |||||||||||||||||| Sbjct: 28427 gtgatggtgacagtgacagtgatg 28404
>gb|BC112371.1| Mus musculus RIKEN cDNA 2410039E07 gene, mRNA (cDNA clone IMAGE:40056539), partial cds Length = 1447 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 815 gagaagaaccgcaaggatgctgag 838
>dbj|AK176262.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-16-N20 Length = 980 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gaagaaagttgcagatgatgagag 343 ||||||||||| |||||||||||| Sbjct: 518 gaagaaagttgaagatgatgagag 541
>gb|AE005006.1| Halobacterium sp. NRC-1 section 37 of 170 of the complete genome Length = 13283 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 2705 aggccgcggcggcggccggc 2724
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 gaagaaagttgcagatgatgagag 343 ||||||||||| |||||||||||| Sbjct: 8730 gaagaaagttgaagatgatgagag 8753
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8 Length = 85599 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 agtgatagtgacagtgacagtgat 365 ||||||||||||||||| |||||| Sbjct: 67619 agtgatagtgacagtgatagtgat 67642
>dbj|AK121700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073F21, full insert sequence Length = 2324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 1581 caggccgcggcggcggccgg 1600
>dbj|AK105759.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D05, full insert sequence Length = 2027 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 1298 caggccgcggcggcggccgg 1317
>dbj|AK063053.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F01, full insert sequence Length = 569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 aggccgcggcggcggccggc 168 |||||||||||||||||||| Sbjct: 145 aggccgcggcggcggccggc 164
>gb|AC005962.1|AC005962 Homo sapiens chromosome 17, clone hRPK.506_H_21, complete sequence Length = 162083 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 gtgatagtgacagtgacagtgatg 366 ||||| |||||||||||||||||| Sbjct: 39234 gtgatggtgacagtgacagtgatg 39257
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 2160948 caggccgcggcggcggccgg 2160967
>emb|AL590873.17| Mouse DNA sequence from clone RP23-217I3 on chromosome 11, complete sequence Length = 180309 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 162626 gagaagaaccgcaaggatgctgag 162603 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 101659 gagaagaaccgcaaggatgctgag 101636
>gb|AC004054.1|AC004054 Homo sapiens chromosome 4 clone B220G8 map 4q21, complete sequence Length = 112184 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 attgatctggcttcagtttc 475 |||||||||||||||||||| Sbjct: 89582 attgatctggcttcagtttc 89601
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 gctccgccacgtcaacgccgagcgccgc 65 ||||||||||||| ||||||||||||| Sbjct: 19393 gctccgccacgtcggcgccgagcgccgc 19366
>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 95132 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 38 gctccgccacgtcaacgccgagcgccgc 65 ||||||||||||| ||||||||||||| Sbjct: 90471 gctccgccacgtcggcgccgagcgccgc 90444
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 caggccgcggcggcggccgg 167 |||||||||||||||||||| Sbjct: 49861 caggccgcggcggcggccgg 49880
>gb|AC132409.3| Mus musculus BAC clone RP23-346B1 from 6, complete sequence Length = 207528 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 atctggcttcagtttctgggtcac 483 ||||||||||||||||| |||||| Sbjct: 94763 atctggcttcagtttcttggtcac 94786
>emb|CT009579.20| Mouse DNA sequence from clone CH29-133M20 on chromosome 17, complete sequence Length = 219682 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 gtgatagtgacagtgacagtgatg 366 ||||| |||||||||||||||||| Sbjct: 87114 gtgatggtgacagtgacagtgatg 87137
>gb|AC108836.23| Mus musculus chromosome 19, clone RP23-276L15, complete sequence Length = 196065 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 taaaatttggatgggcaaga 321 |||||||||||||||||||| Sbjct: 50453 taaaatttggatgggcaaga 50434
>gb|M13806.1|MUSKTEPIA Mouse keratin (epidermal) type I mRNA, clone pkScc-52, 3' end Length = 1224 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 gagaagtaccgcaaggatgctgag 215 |||||| ||||||||||||||||| Sbjct: 529 gagaagaaccgcaaggatgctgag 552
>dbj|AB052794.1| Arabidopsis thaliana transposon CACTA3 DNA, repeat sequences Length = 8456 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 318 aagaagaaagttgcagatgatgag 341 ||||||||||||| |||||||||| Sbjct: 5156 aagaagaaagttgtagatgatgag 5179
>dbj|AP000915.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-720L2, complete sequences Length = 188439 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 cccttgggaagaggaaggctgtcc 276 |||||||||||||||| ||||||| Sbjct: 183044 cccttgggaagaggaaagctgtcc 183021 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,714,249 Number of Sequences: 3902068 Number of extensions: 4714249 Number of successful extensions: 116779 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114175 Number of HSP's gapped (non-prelim): 2582 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)