ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ567372.1|HVU567372 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 3 Length = 1831 Score = 1346 bits (679), Expect = 0.0 Identities = 686/687 (99%), Gaps = 1/687 (0%) Strand = Plus / Plus Query: 13 tgaggacagtcctccggttcctgcaatgctggatgatgaggcagattttgttgaagcctt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 tgaggacagtcctccggttcctgcaatgctggatgatgaggcagattttgttgaagcctt 297 Query: 73 gcctattgtacattctgttaatgattctgacattgttgcaagaaagcaactgatagtcgt 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 gcctattgtacattctgttaatgattctgacattgttgcaagaaagcaactgatagtcgt 357 Query: 133 gacagcaacaacagttcggccacaccaggcatattaccttcatcgtctgattcatgtctt 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gacagcaacaacagttcggccacaccaggcatattaccttcatcgtctgattcatgtctt 417 Query: 193 gaaggatgtaccgcctcctctattgtggatagtggcggagtggccatatcagtcccgtga 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gaaggatgtaccgcctcctctattgtggatagtggcggagtggccatatcagtcccgtga 477 Query: 253 aacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaataggaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 aacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaataggaa 537 Query: 313 tcttacaaatattaggaagattattgtctgccaaaagaacaatgcaatttttcatataaa 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 tcttacaaatattaggaagattattgtctgccaaaagaacaatgcaatttttcatataaa 597 Query: 373 gaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagtcga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 gaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagtcga 657 Query: 433 tctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagcaacgcatgt 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 tctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagcaacgcatgt 717 Query: 493 tgggaccaagtataaattgactttggaaggccccctttgtaagggtgatcaggtgactgg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 tgggaccaagtataaattgactttggaaggccccctttgtaagggtgatcaggtgactgg 777 Query: 553 atggcatacaaaccagaggagcactatacttcgtcgatttccaattggtttctctggatt 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 atggcatacaaaccagaggagcactatacttcgtcgatttccaattggtttctctggatt 837 Query: 613 tgcttttaacagcactatactttgggatcctaagagatggaagaaccccagcataggatc 672 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 tgcttttaacagcactatactttgggatcctaagagatggaagaaccccagcataggatc 897 Query: 673 tattatactccatttcaggtggcaggg 699 |||||||||||| |||||||||||||| Sbjct: 898 tattatactcca-ttcaggtggcaggg 923
>emb|AJ969052.1| Triticum aestivum partial mRNA for glycosyltransferase (pglcat6 gene) Length = 1476 Score = 1100 bits (555), Expect = 0.0 Identities = 655/687 (95%), Gaps = 1/687 (0%) Strand = Plus / Plus Query: 13 tgaggacagtcctccggttcctgcaatgctggatgatgaggcagattttgttgaagcctt 72 |||||| ||||| || |||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 219 tgaggagagtcccccagttcctgcaatgttggatgacgaggcagattttgtggaagcctt 278 Query: 73 gcctattgtacattctgttaatgattctgacattgttgcaagaaagcaactgatagtcgt 132 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| || Sbjct: 279 gcctattgtacattctgttaatgattctggcattgttgctcgaaagcaactgatagttgt 338 Query: 133 gacagcaacaacagttcggccacaccaggcatattaccttcatcgtctgattcatgtctt 192 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gacagcaacatcagttcgaccacaccaggcatattaccttcatcgtctgattcatgtctt 398 Query: 193 gaaggatgtaccgcctcctctattgtggatagtggcggagtggccatatcagtcccgtga 252 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 399 gaaggatgtaccgcctcctcttctgtggatagtggcggagtggccatatcagtcccgtga 458 Query: 253 aacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaataggaa 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 aacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaataggaa 518 Query: 313 tcttacaaatattaggaagattattgtctgccaaaagaacaatgcaatttttcatataaa 372 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 519 tgtttcaaatattaggaagattattgtctgccaaaagaacaatgcaatatttcatataaa 578 Query: 373 gaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagtcga 432 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 579 gaagcatcatctagatggtatagtgcattttgccgatgaggagagagcatactcagttga 638 Query: 433 tctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagcaacgcatgt 492 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 tctatttgaagaaatgaggaaaatcaggcgctttggtacatggccagtagcaacgcatgt 698 Query: 493 tgggaccaagtataaattgactttggaaggccccctttgtaagggtgatcaggtgactgg 552 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 699 tgggaccaagtataaattggctttggaaggccccctttgtaagggtgatcaggtcactgg 758 Query: 553 atggcatacaaaccagaggagcactatacttcgtcgatttccaattggtttctctggatt 612 ||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 759 atggcatacaaaccagaagagcagtatacttcgtcgatttccaattggtttttctggatt 818 Query: 613 tgcttttaacagcactatactttgggatcctaagagatggaagaaccccagcataggatc 672 |||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 819 tgcttttaacagcactatactttgggatcctaagagatggaagagccccaccgtagggtc 878 Query: 673 tattatactccatttcaggtggcaggg 699 |||||||||||| ||||||||| |||| Sbjct: 879 tattatactcca-ttcaggtggaaggg 904
>ref|NM_191999.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 573 bits (289), Expect = e-160 Identities = 575/669 (85%), Gaps = 1/669 (0%) Strand = Plus / Plus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 490 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 549 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 550 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 609 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 610 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 669 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 670 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 729 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 730 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 789 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 790 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 849 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 850 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 909 Query: 449 aggaaaatcaggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaa 508 ||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| | | Sbjct: 910 cggaaaataaggcgttttggtacatggccagtagcaatacatgttgggacaaagtacaga 969 Query: 509 ttgactttggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccag 568 || | | ||||||||| ||||||||||| |||| || ||||||||||||||||| ||| Sbjct: 970 gtggttctagaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcag 1029 Query: 569 aggagcactatacttcgtcgatttccaattggtttctctggatttgcttttaacagcact 628 || || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1030 agaaggggtgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcact 1089 Query: 629 atactttgggatcctaagagatggaagaaccccagcataggatctattatactccatttc 688 ||||||||||||||| |||||||||| | ||||| ||| ||||||||| |||| ||| Sbjct: 1090 atactttgggatcctcagagatggaacagccccactttagagtctattatagtcca-ttc 1148 Query: 689 aggtggcag 697 ||||||||| Sbjct: 1149 aggtggcag 1157
>dbj|AK062112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B10, full insert sequence Length = 1436 Score = 573 bits (289), Expect = e-160 Identities = 575/669 (85%), Gaps = 1/669 (0%) Strand = Plus / Plus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 31 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 90 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 91 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 150 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 151 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 210 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 211 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 270 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 271 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 330 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 331 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 390 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 391 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 450 Query: 449 aggaaaatcaggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaa 508 ||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||| | | Sbjct: 451 cggaaaataaggcgttttggtacatggccagtagcaatacatgttgggacaaagtacaga 510 Query: 509 ttgactttggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccag 568 || | | ||||||||| ||||||||||| |||| || ||||||||||||||||| ||| Sbjct: 511 gtggttctagaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcag 570 Query: 569 aggagcactatacttcgtcgatttccaattggtttctctggatttgcttttaacagcact 628 || || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 agaaggggtgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcact 630 Query: 629 atactttgggatcctaagagatggaagaaccccagcataggatctattatactccatttc 688 ||||||||||||||| |||||||||| | ||||| ||| ||||||||| |||| ||| Sbjct: 631 atactttgggatcctcagagatggaacagccccactttagagtctattatagtcca-ttc 689 Query: 689 aggtggcag 697 ||||||||| Sbjct: 690 aggtggcag 698
>dbj|AK069674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027J07, full insert sequence Length = 2241 Score = 565 bits (285), Expect = e-158 Identities = 574/669 (85%), Gaps = 1/669 (0%) Strand = Plus / Plus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 1022 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 1081 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 1082 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 1141 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 1142 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 1201 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 1202 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 1261 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 1262 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 1321 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 1322 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 1381 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 1382 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 1441 Query: 449 aggaaaatcaggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaa 508 ||||||| ||||| ||||||| |||||||||||||| ||||||||||| ||||| | | Sbjct: 1442 cggaaaataaggcgttttggtaaatggccagtagcaatacatgttgggacaaagtacaga 1501 Query: 509 ttgactttggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccag 568 || | | ||||||||| ||||||||||| |||| || ||||||||||||||||| ||| Sbjct: 1502 gtggttctagaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcag 1561 Query: 569 aggagcactatacttcgtcgatttccaattggtttctctggatttgcttttaacagcact 628 || || | || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1562 agaaggggtgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcact 1621 Query: 629 atactttgggatcctaagagatggaagaaccccagcataggatctattatactccatttc 688 ||||||||||||||| |||||||||| | ||||| ||| ||||||||| |||| ||| Sbjct: 1622 atactttgggatcctcagagatggaacagccccactttagagtctattatagtcca-ttc 1680 Query: 689 aggtggcag 697 ||||||||| Sbjct: 1681 aggtggcag 1689
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 381 bits (192), Expect = e-102 Identities = 369/428 (86%) Strand = Plus / Minus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 27753561 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 27753502 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 27753501 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 27753442 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 27753441 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 27753382 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 27753381 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 27753322 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 27753321 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 27753262 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 27753261 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 27753202 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 27753201 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 27753142 Query: 449 aggaaaat 456 ||||||| Sbjct: 27753141 cggaaaat 27753134 Score = 200 bits (101), Expect = 4e-48 Identities = 207/241 (85%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 457 caggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaattgacttt 516 |||||| |||||||||||||||||||||| ||||||||||| ||||| | | || | | Sbjct: 27752281 caggcgttttggtacatggccagtagcaatacatgttgggacaaagtacagagtggttct 27752222 Query: 517 ggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccagaggagcac 576 ||||||||| ||||||||||| |||| || ||||||||||||||||| ||||| || Sbjct: 27752221 agaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcagagaagggg 27752162 Query: 577 tatacttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 636 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27752161 tgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 27752102 Query: 637 ggatcctaagagatggaagaaccccagcataggatctattatactccatttcaggtggca 696 ||||||| |||||||||| | ||||| ||| ||||||||| |||| ||||||||||| Sbjct: 27752101 ggatcctcagagatggaacagccccactttagagtctattatagtcca-ttcaggtggca 27752043 Query: 697 g 697 | Sbjct: 27752042 g 27752042
>dbj|AP003374.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1117_G01 Length = 125454 Score = 381 bits (192), Expect = e-102 Identities = 369/428 (86%) Strand = Plus / Minus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 45616 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 45557 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 45556 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 45497 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 45496 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 45437 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 45436 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 45377 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 45376 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 45317 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 45316 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 45257 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 45256 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 45197 Query: 449 aggaaaat 456 ||||||| Sbjct: 45196 cggaaaat 45189 Score = 200 bits (101), Expect = 4e-48 Identities = 207/241 (85%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 457 caggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaattgacttt 516 |||||| |||||||||||||||||||||| ||||||||||| ||||| | | || | | Sbjct: 44336 caggcgttttggtacatggccagtagcaatacatgttgggacaaagtacagagtggttct 44277 Query: 517 ggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccagaggagcac 576 ||||||||| ||||||||||| |||| || ||||||||||||||||| ||||| || Sbjct: 44276 agaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcagagaagggg 44217 Query: 577 tatacttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 636 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44216 tgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 44157 Query: 637 ggatcctaagagatggaagaaccccagcataggatctattatactccatttcaggtggca 696 ||||||| |||||||||| | ||||| ||| ||||||||| |||| ||||||||||| Sbjct: 44156 ggatcctcagagatggaacagccccactttagagtctattatagtcca-ttcaggtggca 44098 Query: 697 g 697 | Sbjct: 44097 g 44097
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 381 bits (192), Expect = e-102 Identities = 369/428 (86%) Strand = Plus / Minus Query: 29 gttcctgcaatgctggatgatgaggcagattttgttgaagccttgcctattgtacattct 88 |||||||||||| ||||||| ||||| || ||||||||||||| |||||| ||||||||| Sbjct: 162127 gttcctgcaatgttggatgacgaggcggactttgttgaagcctcgcctatcgtacattct 162068 Query: 89 gttaatgattctgacattgttgcaagaaagcaactgatagtcgtgacagcaacaacagtt 148 ||||||||||||| |||||||| || ||||| |||||| | | ||| |||| | ||| Sbjct: 162067 gttaatgattctggcattgttgtgaggaagcacctgataattattacaacaacctctgtt 162008 Query: 149 cggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccgcct 208 || |||||||||||||||||| | ||||| || |||||| || || ||||| |||||| Sbjct: 162007 cgaccacaccaggcatattacttaaatcgtttggctcatgtattaaaagatgtcccgcct 161948 Query: 209 cctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatcctg 268 ||||| ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| Sbjct: 161947 cctcttctgtggatagtggcagagtggccatatcagtcccgcgaaactgcagaaatactg 161888 Query: 269 aggtcttctgggatcatgtacagacatattgtatgcaataggaatcttacaaatattagg 328 ||||||||||||||||||||||||||| || | |||||| ||||| ||||||||| ||| Sbjct: 161887 aggtcttctgggatcatgtacagacatcttatctgcaatcggaatactacaaatataagg 161828 Query: 329 aagattattgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagat 388 |||||| |||||||||||||||| |||||||||||||| || |||||||||| ||||||| Sbjct: 161827 aagattgttgtctgccaaaagaataatgcaatttttcacattaagaagcaccgtctagat 161768 Query: 389 ggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatg 448 || ||||||||||| || ||||| |||||||||||||||| || || ||||| |||||| Sbjct: 161767 ggtatagtgcatttcgctgatgaagagagagcatactcagctgacctgtttgaagaaatg 161708 Query: 449 aggaaaat 456 ||||||| Sbjct: 161707 cggaaaat 161700 Score = 200 bits (101), Expect = 4e-48 Identities = 207/241 (85%), Gaps = 1/241 (0%) Strand = Plus / Minus Query: 457 caggcgctttggtacatggccagtagcaacgcatgttgggaccaagtataaattgacttt 516 |||||| |||||||||||||||||||||| ||||||||||| ||||| | | || | | Sbjct: 160847 caggcgttttggtacatggccagtagcaatacatgttgggacaaagtacagagtggttct 160788 Query: 517 ggaaggccccctttgtaagggtgatcaggtgactggatggcatacaaaccagaggagcac 576 ||||||||| ||||||||||| |||| || ||||||||||||||||| ||||| || Sbjct: 160787 agaaggccccgtttgtaagggtaatcaagtcactggatggcatacaaatcagagaagggg 160728 Query: 577 tatacttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 636 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160727 tgtatcacgtcgatttccaattggtttctctggatttgcttttaacagcactatactttg 160668 Query: 637 ggatcctaagagatggaagaaccccagcataggatctattatactccatttcaggtggca 696 ||||||| |||||||||| | ||||| ||| ||||||||| |||| ||||||||||| Sbjct: 160667 ggatcctcagagatggaacagccccactttagagtctattatagtcca-ttcaggtggca 160609 Query: 697 g 697 | Sbjct: 160608 g 160608
>emb|AJ969051.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat6 gene) Length = 1717 Score = 246 bits (124), Expect = 8e-62 Identities = 278/328 (84%), Gaps = 1/328 (0%) Strand = Plus / Plus Query: 370 aaagaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagt 429 ||||||||| || || ||||| ||| |||||||||| |||| |||| ||| |||||||| Sbjct: 837 aaagaagcatcaccttgatggtataatgcattttgctgatgtggagcgagtgtactcagt 896 Query: 430 cgatctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagcaacgca 489 ||| ||||||| || ||| | |||||||||||||||||||| |||||||||||||| || Sbjct: 897 tgatttatttgaagacatgcgaaaaatcaggcgctttggtacgtggccagtagcaacaca 956 Query: 490 tgttgggaccaagtataaattgactttggaaggccccctttgtaagggtgatcaggtgac 549 |||||| ||| ||| || || ||||||||| ||| |||||| |||| |||| || || Sbjct: 957 tgttggatccaggtacaaggtggttttggaaggacccatttgtaggggtaatcaagtcac 1016 Query: 550 tggatggcatacaaaccagaggagcactatacttcgtcgatttccaattggtttctctgg 609 ||||||||||||||||||||| || | ||| |||||| |||||||||||||||||||| Sbjct: 1017 tggatggcatacaaaccagagaaggggtgtacctcgtcggtttccaattggtttctctgg 1076 Query: 610 atttgcttttaacagcactatactttgggatcctaagagatggaagaaccccagcatagg 669 |||||||||||||||||||||||||||||||| |||||||||| | ||||| ||| Sbjct: 1077 gtttgcttttaacagcactatactttgggatccccagagatggaacagccccactttaga 1136 Query: 670 atctattatactccatttcaggtggcag 697 |||||||||||||| |||||||||||| Sbjct: 1137 gtctattatactcca-ttcaggtggcag 1163 Score = 75.8 bits (38), Expect = 2e-10 Identities = 128/158 (81%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| |||||||||||| | |||| || ||||| ||||| | ||||| | Sbjct: 613 gttcggccacagcaggcatattacttgaatcggctagcccatgttttgaaagctgtacag 672 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 | ||||| |||||| |||||| ||| ||||| | |||||| |||||||| |||||| Sbjct: 673 gcacctcttttgtggttagtggtggaatggcctgaacagtcctatgaaacagcagaaatt 732 Query: 266 ctgaggtcttctgggatcatgtacagacatattgtatg 303 ||||||||||||||| | |||||||| ||| ||||||| Sbjct: 733 ctgaggtcttctggggttatgtacaggcatcttgtatg 770 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 ||||| |||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 490 cctccagttcctgcgatgttggatgatgaggcggattttgctgaa 534
>emb|AJ577570.1|TAE577570 Triticum aestivum partial mRNA for beta3-glucuronyltransferase (pglcat6 gene) Length = 1503 Score = 123 bits (62), Expect = 8e-25 Identities = 191/234 (81%) Strand = Plus / Plus Query: 250 tgaaacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaatag 309 |||||||| ||||||||| |||||||||||| | |||||||| |||||||| |||| | Sbjct: 427 tgaaacagcagaaatcctcaggtcttctggggttatgtacaggcatattgtctgcaggaa 486 Query: 310 gaatcttacaaatattaggaagattattgtctgccaaaagaacaatgcaatttttcatat 369 |||||||||| | | |||||||| |||||| |||| |||||||||||| | |||||| Sbjct: 487 aaatcttacaagtgtacggaagattgctgtctgtcaaaggaacaatgcaatctatcatat 546 Query: 370 aaagaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagt 429 || ||||| || || ||||| |||||||| ||||| ||||| || || ||||| | Sbjct: 547 caaaaagcatcaccttgatggtatagtgcactttgctgatgaagaacgatcatacatggg 606 Query: 430 cgatctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagc 483 ||| ||||||| |||||| |||||||||||||| ||||| ||||||| ||||| Sbjct: 607 tgatgtatttgaagaaatgcggaaaatcaggcgcgttggtgcatggcctgtagc 660 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 583 tcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatcc 642 ||||||||| ||||||||||||||||| |||||||| ||||| || || || |||||||| Sbjct: 760 tcgtcgattcccaattggtttctctgggtttgctttcaacagtacaatgctctgggatcc 819 Query: 643 t 643 | Sbjct: 820 t 820 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgagg 53 |||||||||||||||||| |||||||||||| Sbjct: 206 cctccggttcctgcaatgttggatgatgagg 236
>emb|AJ567371.1|HVU567371 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 2 Length = 1576 Score = 107 bits (54), Expect = 5e-20 Identities = 189/234 (80%) Strand = Plus / Plus Query: 250 tgaaacagtagaaatcctgaggtcttctgggatcatgtacagacatattgtatgcaatag 309 |||||||| |||||||| |||||||||||| | |||||||| |||||||| |||| | Sbjct: 522 tgaaacagcggaaatcctcaggtcttctggggttatgtacaggcatattgtctgcaggaa 581 Query: 310 gaatcttacaaatattaggaagattattgtctgccaaaagaacaatgcaatttttcatat 369 |||||||| | | | |||||||| |||||| |||| |||||||||||| | |||||| Sbjct: 582 aaatcttaccagtgtacggaagattgctgtctgtcaaaggaacaatgcaatctatcatat 641 Query: 370 aaagaagcaccatctagatggcatagtgcattttgccgatgaggagagagcatactcagt 429 |||||||| || || ||||| |||||||| ||||| || || ||| | ||||| | Sbjct: 642 taagaagcatcaccttgatggtatagtgcactttgctgacgaagagcggtcatacatggg 701 Query: 430 cgatctatttgaggaaatgaggaaaatcaggcgctttggtacatggccagtagc 483 ||| ||||||| |||||| |||||||||||||| ||||| ||||||| ||||| Sbjct: 702 tgatgtatttgaagaaatgcggaaaatcaggcgcgttggtgcatggcctgtagc 755 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 583 tcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatcc 642 ||||||||| ||||||||||||||||| |||||||| ||||| || || || |||||||| Sbjct: 855 tcgtcgattcccaattggtttctctgggtttgctttcaacagtacaatgctctgggatcc 914 Query: 643 t 643 | Sbjct: 915 t 915 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgagg 53 |||||||||||||||||| |||||||||||| Sbjct: 301 cctccggttcctgcaatgttggatgatgagg 331
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 582 ttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatc 641 |||||||||||||| ||||||||||||| |||||||| |||||||| || || ||||||| Sbjct: 7875 ttcgtcgatttccagttggtttctctgggtttgctttcaacagcacaatgctatgggatc 7934 Query: 642 ctaagagatggaa 654 || |||| ||||| Sbjct: 7935 ctgagaggtggaa 7947 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 20 agtcctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 5907 agtcctccagtccctgcaatgctggatgacgaggctgattttgttgaa 5954 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| || || |||||||| | ||| || |||||||||||| ||||| | Sbjct: 6033 gttcggccacaacaagcgtattacctgaaccgtttggctcatgtcttgaaaactgtacag 6092 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 ||||||| ||||| |||||| || ||||| |||||||| | |||||| ||||||| Sbjct: 6093 tctcctcttctgtggttagtggtagaatggcctgatcagtcctttcaaacagcagaaatc 6152 Query: 266 ctgaggtcttctgggatcatgtacag 291 || |||||||||||| | |||||||| Sbjct: 6153 cttaggtcttctggggttatgtacag 6178
>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0001A14, complete sequence Length = 129292 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 582 ttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatc 641 |||||||||||||| ||||||||||||| |||||||| |||||||| || || ||||||| Sbjct: 110593 ttcgtcgatttccagttggtttctctgggtttgctttcaacagcacaatgctatgggatc 110652 Query: 642 ctaagagatggaa 654 || |||| ||||| Sbjct: 110653 ctgagaggtggaa 110665 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 20 agtcctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 108625 agtcctccagtccctgcaatgctggatgacgaggctgattttgttgaa 108672 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| || || |||||||| | ||| || |||||||||||| ||||| | Sbjct: 108751 gttcggccacaacaagcgtattacctgaaccgtttggctcatgtcttgaaaactgtacag 108810 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 ||||||| ||||| |||||| || ||||| |||||||| | |||||| ||||||| Sbjct: 108811 tctcctcttctgtggttagtggtagaatggcctgatcagtcctttcaaacagcagaaatc 108870 Query: 266 ctgaggtcttctgggatcatgtacag 291 || |||||||||||| | |||||||| Sbjct: 108871 cttaggtcttctggggttatgtacag 108896
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 582 ttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatc 641 |||||||||||||| ||||||||||||| |||||||| |||||||| || || ||||||| Sbjct: 27643317 ttcgtcgatttccagttggtttctctgggtttgctttcaacagcacaatgctatgggatc 27643376 Query: 642 ctaagagatggaa 654 || |||| ||||| Sbjct: 27643377 ctgagaggtggaa 27643389 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 20 agtcctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 27641349 agtcctccagtccctgcaatgctggatgacgaggctgattttgttgaa 27641396 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| || || |||||||| | ||| || |||||||||||| ||||| | Sbjct: 27641475 gttcggccacaacaagcgtattacctgaaccgtttggctcatgtcttgaaaactgtacag 27641534 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 ||||||| ||||| |||||| || ||||| |||||||| | |||||| ||||||| Sbjct: 27641535 tctcctcttctgtggttagtggtagaatggcctgatcagtcctttcaaacagcagaaatc 27641594 Query: 266 ctgaggtcttctgggatcatgtacag 291 || |||||||||||| | |||||||| Sbjct: 27641595 cttaggtcttctggggttatgtacag 27641620
>dbj|AK068237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148K06, full insert sequence Length = 2056 Score = 81.8 bits (41), Expect = 3e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 582 ttcgtcgatttccaattggtttctctggatttgcttttaacagcactatactttgggatc 641 |||||||||||||| ||||||||||||| |||||||| |||||||| || || ||||||| Sbjct: 1339 ttcgtcgatttccagttggtttctctgggtttgctttcaacagcacaatgctatgggatc 1398 Query: 642 ctaagagatggaa 654 || |||| ||||| Sbjct: 1399 ctgagaggtggaa 1411 Score = 63.9 bits (32), Expect = 7e-07 Identities = 109/132 (82%), Gaps = 2/132 (1%) Strand = Plus / Plus Query: 355 tgcaatttttcatataaagaagcaccatctagatggcatagtgcattttgccgatgagga 414 |||||| | |||||| || ||||| | ||| ||||| ||| |||||||||| ||||| || Sbjct: 1103 tgcaatctatcatattaaaaagcatcgtcttgatggtataatgcattttgctgatgaaga 1162 Query: 415 gagagcatac-tcagtcgatctatttgaggaaatgaggaaaatcaggcgctttggtacat 473 | | ||||| | ||| ||| ||||||| |||||| ||||||||||||| |||||| ||| Sbjct: 1163 gcggtcatacatgagt-gatgtatttgaagaaatgcggaaaatcaggcggtttggtgcat 1221 Query: 474 ggccagtagcaa 485 |||| ||||||| Sbjct: 1222 ggcctgtagcaa 1233 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 20 agtcctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 768 agtcctccagtccctgcaatgctggatgacgaggctgattttgttgaa 815 Score = 60.0 bits (30), Expect = 1e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| || || |||||||| | ||| || |||||||||||| ||||| | Sbjct: 894 gttcggccacaacaagcgtattacctgaaccgtttggctcatgtcttgaaaactgtacag 953 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 ||||||| ||||| |||||| || ||||| |||||||| | |||||| ||||||| Sbjct: 954 tctcctcttctgtggttagtggtagaatggcctgatcagtcctttcaaacagcagaaatc 1013 Query: 266 ctgaggtcttctgggatcatgtacag 291 || |||||||||||| | |||||||| Sbjct: 1014 cttaggtcttctggggttatgtacag 1039
>emb|AJ577239.1|ZMA577239 Zea mays mRNA for putative beta3-glucuronyltransferase, (pglcat6 gene), clone 2 Length = 1394 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 386 gatggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaa 445 ||||| ||| |||||||||| ||||| ||| | ||||||||| ||| ||||||| ||| Sbjct: 526 gatggtataatgcattttgctgatgaagagcggtcatactcagctgatgtatttgaagaa 585 Query: 446 atgaggaaaatcaggcgctttggtacatggccagtagcaacgcatgttgggaccaagtat 505 ||| ||| |||||||||||||| ||||||| ||||||| |||||||| || |||||| Sbjct: 586 atgcagaagatcaggcgctttggctcatggcctgtagcaatccatgttggaacgaagtat 645 Query: 506 a 506 | Sbjct: 646 a 646 Score = 52.0 bits (26), Expect = 0.003 Identities = 116/146 (79%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| |||||||||||| | |||| || ||||| ||||| | ||||| | Sbjct: 286 gttcggccacaacaggcatattacttgaatcggctagcccatgttttgaaagctgtacag 345 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 | ||||| || ||| | |||| ||| ||||| | |||||| |||||||| |||||| Sbjct: 346 gcacctcttttatggttggtggtggaatggcctgaacagtcctatgaaacagcagaaatt 405 Query: 266 ctgaggtcttctgggatcatgtacag 291 ||||||||||||||| | |||||||| Sbjct: 406 ctgaggtcttctggggttatgtacag 431 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 ||||| |||| |||| || ||||||||||||||||||||| |||| Sbjct: 163 cctccagttcgtgcattgttggatgatgaggcagattttgctgaa 207
>emb|AJ971295.1| Saccharum officinarum mRNA for glycosyltransferase (pglcat6 gene) Length = 2259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| |||||||||||| | |||| || ||||| ||||| | ||||| | Sbjct: 1043 gttcggccacagcaggcatattacttgaatcggctagcccatgttttgaaagctgtacag 1102 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 | ||||| || ||| |||||| ||| ||||| | |||||| |||||||| |||||| Sbjct: 1103 gcacctcttttatggttagtggtggaatggcctgaacagtcctatgaaacagcagaaatt 1162 Query: 266 ctgaggtcttctgggatcatgtacagacatattgtatg 303 ||||||||||||||| | |||||||| ||| ||||||| Sbjct: 1163 ctgaggtcttctggggttatgtacaggcatcttgtatg 1200 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 583 tcgtcgatttccaattggtttctctggatttgcttttaacag 624 ||||||||| |||||||||||||||| ||||||||| ||||| Sbjct: 1489 tcgtcgattcccaattggtttctctgcatttgctttcaacag 1530 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Plus Query: 337 tgtctgccaaaagaacaatgcaatttttcatataaagaagcaccatctagatggcatagt 396 |||||| |||| ||| |||||||| | |||| | || ||||| || || ||||| ||| | Sbjct: 1234 tgtctgtcaaaggaataatgcaatctatcatgtcaaaaagcatcaccttgatggtataat 1293 Query: 397 gcattttgccgatgaggagagagcatactcagtcgatctatttgaggaaatgaggaaaat 456 ||||||||| || || || | ||||||||| || ||||||| |||||| ||| || Sbjct: 1294 gcattttgctgacgaagaacggtcatactcagctgacgtatttgaagaaatgcagaagat 1353 Query: 457 caggcgctttggtacatggccagtagcaacgcatgttgggaccaagtata 506 |||||||||||| ||||||| ||||||| |||||||| || ||||||| Sbjct: 1354 caggcgctttggctcatggcctgtagcaatccatgttggaacaaagtata 1403 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 ||||| |||||||| ||| ||||||||||||| ||||||| |||| Sbjct: 920 cctccagttcctgcgatgttggatgatgaggcggattttgctgaa 964
>gb|AY104254.1| Zea mays PCO077387 mRNA sequence Length = 597 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 23 cctccggttcctgcaatgctggatgatgaggcagattttgttgaa 67 ||||| |||||||||||| ||||||||||||||||||||| |||| Sbjct: 128 cctccagttcctgcaatgttggatgatgaggcagattttgctgaa 172 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 386 gatggcatagtgcattttgccgatgaggagagagcatactcagtcgatctatttgaggaa 445 ||||| ||| |||||||||| ||||| ||| | ||||||||| ||| ||||||| ||| Sbjct: 491 gatggtataatgcattttgctgatgaagagcggtcatactcagctgatgtatttgaagaa 550 Query: 446 atgaggaaaatcaggcgctttggtacatggccagtagcaa 485 ||| | | |||||||||||||| ||||||| ||||||| Sbjct: 551 atgcagtagatcaggcgctttggctcatggcctgtagcaa 590 Score = 52.0 bits (26), Expect = 0.003 Identities = 116/146 (79%) Strand = Plus / Plus Query: 146 gttcggccacaccaggcatattaccttcatcgtctgattcatgtcttgaaggatgtaccg 205 ||||||||||| |||||||||||| | |||| || ||||| ||||| | ||||| | Sbjct: 251 gttcggccacaacaggcatattacttgaatcggctagcccatgttttgaaagctgtacag 310 Query: 206 cctcctctattgtggatagtggcggagtggccatatcagtcccgtgaaacagtagaaatc 265 | ||||| || ||| | |||| ||| ||||| | |||||| |||||||| |||||| Sbjct: 311 gcacctcttttatggttggtggtggaatggcctgaacagtcctatgaaacagcagaaatt 370 Query: 266 ctgaggtcttctgggatcatgtacag 291 ||||||||||||||| | |||||||| Sbjct: 371 ctgaggtcttctggggttatgtacag 396
>ref|NM_102525.2| Arabidopsis thaliana transferase, transferring glycosyl groups AT1G27600 transcript variant AT1G27600.1 mRNA, complete cds Length = 1742 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1133 ggatttgcttttaacagcactatactctgggaccctaa 1170
>ref|NM_202193.1| Arabidopsis thaliana transferase, transferring glycosyl groups AT1G27600 transcript variant AT1G27600.2 mRNA, complete cds Length = 1637 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1133 ggatttgcttttaacagcactatactctgggaccctaa 1170
>emb|BX816409.1|CNS0ADDZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1712 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1133 ggatttgcttttaacagcactatactctgggaccctaa 1170
>emb|BX817620.1|CNS0ACEY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 840 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 266 ggatttgcttttaacagcactatactctgggaccctaa 303
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I, complete sequence Length = 106753 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 16428 ggatttgcttttaacagcactatactctgggaccctaa 16391
>gb|AY086258.1| Arabidopsis thaliana clone 230979 mRNA, complete sequence Length = 1292 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 683 ggatttgcttttaacagcactatactctgggaccctaa 720
>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence Length = 65839 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 608 ggatttgcttttaacagcactatactttgggatcctaa 645 |||||||||||||||||||||||||| ||||| ||||| Sbjct: 48841 ggatttgcttttaacagcactatactctgggaccctaa 48804
>emb|AJ971040.1| Picea glauca partial mRNA for beta1,3-glucuronosyltransferase (pglcat1 gene) Length = 1672 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Plus Query: 447 tgaggaaaatcaggcgctttggtacatggccagt 480 |||| ||||| |||||||||||||| |||||||| Sbjct: 663 tgagaaaaattaggcgctttggtacctggccagt 696
>gb|DQ223684.1| Synthetic construct evolved D-lactonohydrolase mRNA, complete cds Length = 1146 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 atgtcttgaaggatgtaccgcctcc 210 |||||||||||||||| |||||||| Sbjct: 50 atgtcttgaaggatgtgccgcctcc 74
>gb|AC126043.3| Mus musculus BAC clone RP24-356N5 from chromosome 13, complete sequence Length = 140207 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 aatttttcatataaagaagca 378 ||||||||||||||||||||| Sbjct: 104182 aatttttcatataaagaagca 104202
>emb|AL137852.15| Human DNA sequence from clone RP11-131A5 on chromosome 9q32-34.11 Contains the RAD23B gene for RA23B homolog B (S. cerevisiae) and three CpG islands, complete sequence Length = 162509 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 631 actttgggatcctaagagatg 651 ||||||||||||||||||||| Sbjct: 22077 actttgggatcctaagagatg 22097
>gb|AY728018.1| Gibberella fujikuroi D-lactonohydrolase mRNA, complete cds Length = 1146 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 atgtcttgaaggatgtaccgcctcc 210 |||||||||||||||| |||||||| Sbjct: 50 atgtcttgaaggatgtgccgcctcc 74
>gb|AC158115.2| Mus musculus BAC clone RP24-180C10 from chromosome 13, complete sequence Length = 176518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 aatttttcatataaagaagca 378 ||||||||||||||||||||| Sbjct: 135863 aatttttcatataaagaagca 135843
>gb|DQ334870.1| Synthetic construct evolved D-pantonohydrolase mRNA, complete cds Length = 1146 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 atgtcttgaaggatgtaccgcctcc 210 |||||||||||||||| |||||||| Sbjct: 50 atgtcttgaaggatgtgccgcctcc 74
>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence Length = 143851 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gctggatgatgaggcagatt 59 |||||||||||||||||||| Sbjct: 50876 gctggatgatgaggcagatt 50895
>gb|AC133179.3| Mus musculus BAC clone RP24-134P14 from chromosome 14, complete sequence Length = 160216 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 aatgcaatttttcatataaa 372 |||||||||||||||||||| Sbjct: 88091 aatgcaatttttcatataaa 88072
>gb|U28412.2| Caenorhabditis elegans cosmid T19C3, complete sequence Length = 30352 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cttcatcgtctgattcatgt 189 |||||||||||||||||||| Sbjct: 26418 cttcatcgtctgattcatgt 26437
>gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete sequence Length = 132557 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tttctctggatttgctttta 620 |||||||||||||||||||| Sbjct: 36737 tttctctggatttgctttta 36718
>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete sequence Length = 225159 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 358 aatttttcatataaagaagcaccatcta 385 ||||||||||||||| ||||| |||||| Sbjct: 135585 aatttttcatataaataagcatcatcta 135612
>gb|AC147302.2| Pan troglodytes BAC clone RP43-55L5 from 7, complete sequence Length = 191336 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tttctctggatttgctttta 620 |||||||||||||||||||| Sbjct: 74098 tttctctggatttgctttta 74079
>gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome 5, complete sequence Length = 180892 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ctgccaaaagaacaatgcaa 359 |||||||||||||||||||| Sbjct: 91114 ctgccaaaagaacaatgcaa 91095
>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence Length = 197720 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gctggatgatgaggcagatt 59 |||||||||||||||||||| Sbjct: 38329 gctggatgatgaggcagatt 38310
>ref|XM_660875.1| Cryptosporidium hominis TU502 PP2C (Chro.50429) partial mRNA Length = 1212 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctgttaatgattctgacatt 106 |||||||||||||||||||| Sbjct: 83 ctgttaatgattctgacatt 102
>emb|Z70272.1|HSJ30E17 Human DNA sequence from clone RP1-30E17 on chromosome X Contains a ribosomal protein L7a (RPL7A) pseudogene and part of a novel gene, complete sequence Length = 81984 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 atcaggtgactggatggcat 559 |||||||||||||||||||| Sbjct: 2365 atcaggtgactggatggcat 2384
>emb|AJ969045.1| Lotus japonicus mRNA for beta-1,3-glucuronosyltransferase (pglcat1 gene) Length = 1212 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 605 tctggatttgcttttaacagcactatactttgggatcctaagagatgg 652 ||||||||||| ||||||||||| || | |||||||| ||| ||||| Sbjct: 937 tctggatttgcatttaacagcacaatcttgtgggatccaaagcgatgg 984
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ttgactttggaaggccccct 528 |||||||||||||||||||| Sbjct: 1727694 ttgactttggaaggccccct 1727675
>ref|NM_064823.3| Caenorhabditis elegans FEMinization of XX and XO animals family member (fem-2) (fem-2) mRNA, complete cds Length = 1784 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cttcatcgtctgattcatgt 189 |||||||||||||||||||| Sbjct: 1378 cttcatcgtctgattcatgt 1359
>gb|AC146071.3| Pan troglodytes BAC clone RP43-64L21 from chromosome 7, complete sequence Length = 207055 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tttctctggatttgctttta 620 |||||||||||||||||||| Sbjct: 108789 tttctctggatttgctttta 108770
>gb|AC154228.1| Mus musculus BAC clone RP24-143I4 from chromosome 14, complete sequence Length = 164697 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tttctctggatttgctttta 620 |||||||||||||||||||| Sbjct: 87954 tttctctggatttgctttta 87935
>emb|CR790363.24| Zebrafish DNA sequence from clone DKEY-175D9 in linkage group 3, complete sequence Length = 139765 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 agattattgtctgccaaaag 349 |||||||||||||||||||| Sbjct: 104994 agattattgtctgccaaaag 105013
>gb|U30252.3| Synechococcus sp. PCC 7942 cosmids 7H1 and 2E8, complete sequence Length = 60090 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ttgactttggaaggccccct 528 |||||||||||||||||||| Sbjct: 19987 ttgactttggaaggccccct 19968
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ggtgactggatggcatacaaacca 567 ||||| |||||||||||||||||| Sbjct: 76017 ggtgattggatggcatacaaacca 76040
>gb|U29515.1|CEU29515 Caenorhabditis elegans sex-determining (fem-2) gene, complete cds Length = 3091 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cttcatcgtctgattcatgt 189 |||||||||||||||||||| Sbjct: 2436 cttcatcgtctgattcatgt 2417
>dbj|AP007300.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29K22, TM0275, complete sequence Length = 104570 Score = 40.1 bits (20), Expect = 9.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 605 tctggatttgcttttaacagcactatactttgggatcctaagagatgg 652 ||||||||||| ||||||||||| || | |||||||| ||| ||||| Sbjct: 77462 tctggatttgcatttaacagcacaatcttgtgggatccaaagcgatgg 77509
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ttgactttggaaggccccct 528 |||||||||||||||||||| Sbjct: 2589090 ttgactttggaaggccccct 2589109 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,340,215 Number of Sequences: 3902068 Number of extensions: 6340215 Number of successful extensions: 120295 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120022 Number of HSP's gapped (non-prelim): 252 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
