>ZN161_HUMAN (Q14119) Zinc finger protein 161 (Putative transcription factor|
           DB1)
          Length = 516

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 28/78 (35%), Positives = 35/78 (44%)
 Frame = -2

Query: 248 TLPCPFSTVPSVFSFTICSSLITRS*ILFACGCEWSSAVNR*TLPLCST*LHPGSFLSPR 69
           TL  PFS   SV S T+ + +   + +        SSAVN  T P+     HP +  SP 
Sbjct: 391 TLTTPFSITSSVSSETMSNPVTVAAAMSMRSPVNVSSAVNI-TSPMNIG--HPVTITSPL 447

Query: 68  SFIIARTLTTPSGCPVSV 15
           S     TLTTP   P  V
Sbjct: 448 SMTSPLTLTTPVNLPTPV 465

>FDHE_PASMU (Q9CNM2) Protein fdhE homolog|
          Length = 309

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 340 DSEIVVIKNLRVCGDCHSFLKAV 408
           DSEI  +K    CGDCHS+LKA+
Sbjct: 244 DSEIAAVK-AESCGDCHSYLKAL 265

>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)|
          Length = 956

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 316 PQQASHCESRSTAQPSSRSTARPLCLAHFPQCHLFSPSP 200
           P Q S C + +TA PSS  +     +A  P C   S SP
Sbjct: 702 PLQGSFCANSNTASPSSHPSTSFASMASLPSCPAPSSSP 740

>SYK2_METAC (Q8TSN5) Lysyl-tRNA synthetase 2 (EC 6.1.1.6) (Lysine--tRNA ligase|
           2) (LysRS 2)
          Length = 511

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +1

Query: 169 IYDLVIKLEQMVKEKTDGTVENGQGRV-DERYSGKMAAPLIGFHSEKLAVAFSLLNTDDS 345
           I ++++K E    EK +G      GR+ + R  GKM    +G  + ++ V     N  D 
Sbjct: 57  ICEILVKFEDF--EKNEGLSVRTAGRLYNIRKHGKMIFADLGDQTGRIQVLIRKGNLPDE 114

Query: 346 EIVVIKNLRVCGD 384
           E    KNL   GD
Sbjct: 115 EFATFKNLMDSGD 127

>CAPP_THES7 (P51060) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 857

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/74 (29%), Positives = 34/74 (45%)
 Frame = +1

Query: 28  QPDGVVRVRAMMKERGLKKEPGCSYVEHKGRVHLFTADDHSHPQAKRIYDLVIKLEQMVK 207
           +P+G + +   +KERGL  E   +++     +  FTA    HP   R   L   LE++ +
Sbjct: 107 RPEGFLALAKALKERGLSLEEAEAHLNRLALLLTFTA----HPTETRRRTLRHHLERLQE 162

Query: 208 EKTDGTVENGQGRV 249
           E   G  E    RV
Sbjct: 163 ELEGGDRERLLARV 176

>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal|
            protein); Helper component proteinase (EC 3.4.22.45)
            (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
            inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
            (6K2); Viral geno
          Length = 3054

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +2

Query: 425  GHFLSGTR--AASIASKVEHAPAK 490
            GHF+  TR  AAS+AS++ H+PA+
Sbjct: 1218 GHFMEFTRDTAASVASEISHSPAR 1241

>COX10_GIBZE (Q4I5G1) Protoheme IX farnesyltransferase, mitochondrial precursor|
           (EC 2.5.1.-) (Heme O synthase)
          Length = 507

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 403 AVSAIANRAFLVRDASRFHRFEGGACSCKD-YW*RIW 510
           AV++    A+L+R++ RF R+EG   S +  +W  +W
Sbjct: 412 AVTSFPINAWLIRESVRFWRYEGNKGSARGLFWASVW 448


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,493,022
Number of Sequences: 219361
Number of extensions: 1872667
Number of successful extensions: 5471
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5466
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)