ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5h01 |
|---|---|
| Clone Library Name | barley_pub |
>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 584 Score = 118 bits (296), Expect = 4e-27 Identities = 58/76 (76%), Positives = 65/76 (85%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV K HKN+MF+GDG +T+I S NVVDGSTTF+SATVAVVG FLARD+T +N AG Sbjct: 314 NVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG 373 Query: 203 PSKHQAVALRVGADLS 250 PSKHQAVALRVGADLS Sbjct: 374 PSKHQAVALRVGADLS 389
>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 117 bits (292), Expect = 1e-26 Identities = 57/76 (75%), Positives = 64/76 (84%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV K HKN+MF+GDG +T+I S NVVDGSTTF+SAT AVVG FLARD+T +N AG Sbjct: 314 NVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATAAVVGEGFLARDITFQNTAG 373 Query: 203 PSKHQAVALRVGADLS 250 PSKHQAVALRVGADLS Sbjct: 374 PSKHQAVALRVGADLS 389
>PME2_ARATH (Q42534) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 587 Score = 112 bits (280), Expect = 3e-25 Identities = 55/76 (72%), Positives = 61/76 (80%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV K N+MF+GDG GKT+I S NVVDGSTTF SATVA VG FLARD+T +N AG Sbjct: 317 NVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAG 376 Query: 203 PSKHQAVALRVGADLS 250 PSKHQAVALRVG+D S Sbjct: 377 PSKHQAVALRVGSDFS 392
>PME_DAUCA (P83218) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| Length = 319 Score = 104 bits (259), Expect = 7e-23 Identities = 52/76 (68%), Positives = 60/76 (78%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NV+V K KN+MF+GDG T+I AS NV DGSTTF SATVA VG FLARD+T +N AG Sbjct: 49 NVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAVGAGFLARDITFQNTAG 108 Query: 203 PSKHQAVALRVGADLS 250 +KHQAVALRVG+DLS Sbjct: 109 AAKHQAVALRVGSDLS 124
>PME1_LYCES (P14280) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 546 Score = 102 bits (254), Expect = 3e-22 Identities = 51/76 (67%), Positives = 59/76 (77%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV N NLM +GDGM T I SLNVVDGSTTFRSAT+A VG F+ +D+ I+N AG Sbjct: 274 NVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAVGQGFILQDICIQNTAG 333 Query: 203 PSKHQAVALRVGADLS 250 P+K QAVALRVGAD+S Sbjct: 334 PAKDQAVALRVGADMS 349
>PME21_LYCES (P09607) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 101 bits (251), Expect = 6e-22 Identities = 50/76 (65%), Positives = 58/76 (76%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV NLM +GDGM T+I SLNVVDGSTTF SAT+A VG F+ +D+ I+N AG Sbjct: 278 NVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAG 337 Query: 203 PSKHQAVALRVGADLS 250 P+KHQAVALRVGAD S Sbjct: 338 PAKHQAVALRVGADKS 353
>PME2_CITSI (O04887) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 510 Score = 100 bits (249), Expect = 1e-21 Identities = 50/76 (65%), Positives = 63/76 (82%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 N+EV KN+MF+GDG+GKT+I S +V G+TTF+SATVAVVG+NF+ARD+TI N AG Sbjct: 243 NIEV--KLKNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAG 300 Query: 203 PSKHQAVALRVGADLS 250 P+ HQAVALR G+DLS Sbjct: 301 PNNHQAVALRSGSDLS 316
>PME22_LYCES (Q96575) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin| methylesterase 2) (PE 2) Length = 550 Score = 98.2 bits (243), Expect = 5e-21 Identities = 48/76 (63%), Positives = 57/76 (75%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVEV LM +GDGM T+I +LNVVDGSTTF SAT+A VG F+ +D+ I+N AG Sbjct: 278 NVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAG 337 Query: 203 PSKHQAVALRVGADLS 250 P+KHQAVALRVGAD S Sbjct: 338 PAKHQAVALRVGADKS 353
>PMEU1_LYCES (Q43143) Pectinesterase U1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 583 Score = 95.1 bits (235), Expect = 4e-20 Identities = 49/76 (64%), Positives = 55/76 (72%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NV+V K N+MFMGDG T+I AS NV DGSTTF SATV V LARD+T +N AG Sbjct: 313 NVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAG 372 Query: 203 PSKHQAVALRVGADLS 250 SKHQAVAL VG+DLS Sbjct: 373 ASKHQAVALCVGSDLS 388
>PME1_FICAW (P83947) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 545 Score = 94.7 bits (234), Expect = 5e-20 Identities = 45/74 (60%), Positives = 57/74 (77%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NV+ G KN+M +G+GM T+I S NVVDGSTTF SATVA VG+ F+A+D+ +N AG Sbjct: 273 NVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAG 332 Query: 203 PSKHQAVALRVGAD 244 P K+QAVALR+GAD Sbjct: 333 PEKYQAVALRIGAD 346
>PME_PRUPE (Q43062) Pectinesterase PPE8B precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 522 Score = 94.0 bits (232), Expect = 9e-20 Identities = 47/76 (61%), Positives = 55/76 (72%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NVE+ K NLM +GDGM T+I + + VDG TTFRSAT AV G F+ARD+T EN AG Sbjct: 249 NVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAG 308 Query: 203 PSKHQAVALRVGADLS 250 P KHQAVALR +DLS Sbjct: 309 PEKHQAVALRSDSDLS 324
>PME3_LYCES (Q96576) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 544 Score = 89.0 bits (219), Expect = 3e-18 Identities = 47/76 (61%), Positives = 55/76 (72%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NV V K NLM +GDGM T+I SLNVVDGST F S T+A VG F+ +D+ I+N AG Sbjct: 273 NVVVTKKKMNLMIVGDGMNATIITGSLNVVDGST-FPSNTLAAVGQGFILQDICIQNTAG 331 Query: 203 PSKHQAVALRVGADLS 250 P K QAVALRVGAD+S Sbjct: 332 PEKDQAVALRVGADMS 347
>PME3_PHAVU (Q43111) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 581 Score = 80.1 bits (196), Expect = 1e-15 Identities = 41/83 (49%), Positives = 54/83 (65%) Frame = +2 Query: 2 RPGRTW*NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDL 181 + GR N+++ KN N+M GDG KT + S N +DG+ TF +AT AV G F+A+D+ Sbjct: 307 KEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDI 366 Query: 182 TIENAAGPSKHQAVALRVGADLS 250 N AG SKHQAVALR G+D S Sbjct: 367 GFVNNAGASKHQAVALRSGSDRS 389
>PME1_ARATH (Q43867) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase 1) (PE 1) Length = 586 Score = 79.3 bits (194), Expect = 2e-15 Identities = 38/76 (50%), Positives = 51/76 (67%) Frame = +2 Query: 23 NVEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAG 202 NV + K+ N+M GDG GKT+I S N VDG+ T+ +AT A+ G F+ +D+ I N AG Sbjct: 321 NVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAG 380 Query: 203 PSKHQAVALRVGADLS 250 +KHQAVA R G+D S Sbjct: 381 AAKHQAVAFRSGSDFS 396
>PME_PETIN (Q43043) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 374 Score = 70.9 bits (172), Expect = 8e-13 Identities = 34/73 (46%), Positives = 50/73 (68%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAGP 205 +++ K+ N++ +G+G KT I + +V DG +TF + TV V G NF+A+++ EN AGP Sbjct: 100 IDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGP 159 Query: 206 SKHQAVALRVGAD 244 K QAVALRV AD Sbjct: 160 EKEQAVALRVSAD 172
>PME_MEDSA (Q42920) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) (P65) Length = 447 Score = 70.9 bits (172), Expect = 8e-13 Identities = 37/73 (50%), Positives = 44/73 (60%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAGP 205 V V K + +GDG KT SLN DG T+ +AT V G NF+A+D+ EN AG Sbjct: 173 VNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGT 232 Query: 206 SKHQAVALRVGAD 244 KHQAVALRV AD Sbjct: 233 GKHQAVALRVTAD 245
>PME5_ARATH (Q5MFV8) Pectinesterase-5 precursor (EC 3.1.1.11) (Pectin| methylesterase 5) (PE 5) (VANGUARD 1 protein) Length = 595 Score = 57.0 bits (136), Expect = 1e-08 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAA 199 V + K N+ GDG KTVI S+ + G+TT S TV V F+A+ + +N A Sbjct: 325 VIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA 384 Query: 200 GPSKHQAVALRVGAD 244 GP HQAVA+RV D Sbjct: 385 GPMGHQAVAIRVNGD 399
>PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC 3.1.1.11)| (Pectin methylesterase) (PE) (VANGUARD1-like protein 2) (VGD1-like protein 2) Length = 588 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAA 199 V + K N+ GDG +T+I S+ + G+TT S TV V F+A+ + +N A Sbjct: 318 VRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTA 377 Query: 200 GPSKHQAVALRVGAD 244 GP HQAVALRV D Sbjct: 378 GPLGHQAVALRVNGD 392
>PME4_ARATH (O80722) Pectinesterase-4 precursor (EC 3.1.1.11) (Pectin| methylesterase 4) (PE 4) (VANGUARD1-like protein 1) (VGD1-like protein 1) (AtPME4) Length = 588 Score = 56.2 bits (134), Expect = 2e-08 Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIKASLNVV--DGSTTFRSATVAVVGNNFLARDLTIENAA 199 V + K N+ GDG KTVI + +V G+TT SATV V F+A+ + +N A Sbjct: 318 VIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTA 377 Query: 200 GPSKHQAVALRVGAD 244 GP HQA A+RV D Sbjct: 378 GPMGHQAAAIRVNGD 392
>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 53.5 bits (127), Expect = 1e-07 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAA 199 V + K N+ GDG +T+I S+ + G+TT S TV V F+A+ + +N A Sbjct: 314 VTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTA 373 Query: 200 GPSKHQAVALRVGAD 244 GP HQAVA RV D Sbjct: 374 GPLGHQAVAFRVNGD 388
>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)| (Fragment) Length = 571 Score = 50.8 bits (120), Expect = 9e-07 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = +2 Query: 26 VEVGKNHKNLMFMGDGMGKTVIK--ASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAA 199 V + K N+ GDG +T+I S+ + G+TT S TV V F+A+ + +N A Sbjct: 301 VTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTA 360 Query: 200 GPSKHQAVALRVGAD 244 GP +QAVA RV D Sbjct: 361 GPLGNQAVAFRVNGD 375
>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 29.3 bits (64), Expect = 2.8 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%) Frame = -2 Query: 201 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 37 P A +M L P+T+T A ++ P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTTA-LYIIAPTLALTIALLLWTPLPMPNPLINLNLGLLFIL 106 Query: 36 PTST 25 TS+ Sbjct: 107 ATSS 110
>PME2_RALSO (P24791) Pectinesterase precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 396 Score = 29.3 bits (64), Expect = 2.8 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = +2 Query: 125 TFRSATVAVVGNNFLARDLT-----IENAAGPSKHQAVALRVGAD 244 T RSAT V +NF AR+LT +E + AVAL V D Sbjct: 174 TVRSATAMVRASNFNARNLTFKNSYVEGTFADNNQSAVALAVRGD 218
>NU1M_LEMCA (O78696) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -2 Query: 201 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALITVLPIPSP-----MNMRFLWFF 37 P A +M L P T++ + + P+ L +AL+T +P+P P MNM L+ Sbjct: 48 PFADAMKLFIKEPLRPLTSS-SSLYTIAPTLALTIALVTWIPLPLPYPLINMNMGLLFIL 106 Query: 36 PTST 25 TS+ Sbjct: 107 ATSS 110
>FLII_SALTY (P26465) Flagellum-specific ATP synthase (EC 3.6.3.14)| Length = 456 Score = 28.1 bits (61), Expect = 6.3 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +2 Query: 32 VGKNHKNLMFMGDGMGKTVIKASLNVVDGSTTFRSATVAVVGNNFLARDLTIENAAGP-S 208 VG+ + +F G G+GK+V+ L ++ T V ++G IEN GP Sbjct: 172 VGRGQRMGLFAGSGVGKSVL---LGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 209 KHQAVALRVGADLS 250 + ++V + AD+S Sbjct: 229 RARSVVIAAPADVS 242
>NU1M_PONPP (P92718) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 28.1 bits (61), Expect = 6.3 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 5/51 (9%) Frame = -2 Query: 162 LLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFFPTST 25 L P+T+T+ +V P+ L +AL+ T LP+P+P +N+ L+ TS+ Sbjct: 61 LKPSTSTII-LYIVSPALALTIALLLWTPLPMPNPLINLNLGLLFILATSS 110
>NU1M_PANTR (Q9T9W3) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = -2 Query: 201 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 37 P A +M L P+T+T+ + P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTIT-LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFIL 106 Query: 36 PTST 25 TS+ Sbjct: 107 ATSS 110
>NU1M_GORGO (Q9T9Z0) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = -2 Query: 201 PAAFSMVRSRARKLLPTTATVAERKVVEPSTTLRLALI--TVLPIPSP---MNMRFLWFF 37 P A +M L P+T+T+ + P+ L +AL+ T LP+P+P +N+ L+ Sbjct: 48 PFADAMKLFTKEPLKPSTSTIT-LYITAPTLALTIALLLWTPLPMPNPLVNLNLGLLFIL 106 Query: 36 PTST 25 TS+ Sbjct: 107 ATSS 110
>ALGE6_AZOVI (Q9ZFH0) Poly(beta-D-mannuronate) C5 epimerase 6 (EC 5.1.3.-)| (Mannuronan epimerase 6) Length = 874 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = +2 Query: 50 NLMFMGDGMGKTVIKASLNVVDGS----TTFRSATVAVVGNNFLARDLTIE 190 N+ G GMG+TVIK +VDGS T + +NF RDLT++ Sbjct: 62 NVYLAGAGMGQTVIK----LVDGSAQKITGIVRSPFGEETSNFGMRDLTLD 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,988,414 Number of Sequences: 219361 Number of extensions: 313429 Number of successful extensions: 1028 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1023 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
