ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags5g21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 829 bits (418), Expect = 0.0 Identities = 525/562 (93%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1021 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaatggaaaatcctgccga 962 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 961 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 902 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 901 gcgagacagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 842 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 841 atatgggtgcgtatatttcccgacaaaccggttacaataagacccacagaaacacgtatg 782 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 781 ggctcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 722 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 721 tatgaaatgagcggagtatccgaaactgtagctagagcagctatctctatagctgccagt 662 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaa-aggggtat 477 |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||| Sbjct: 661 aaaatgcccatacgaagtcaatttcttcgattagagatatagaaccccaaaaaggagtat 602 Query: 478 ggaagnnnnnnnntgcccggtttttctttctggaaagacaatatttctttcatccttttg 537 |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 tgaagataaaaaacccctggtttttctttctggaaagacaatatttctttcatccttttg 542 Query: 538 cattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatgt 597 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 cattgaaataacaaatggaaatcaaaataatatgattcaacctcagacccttttaaatgt 482 Query: 598 agcagacaatagtggagctcga 619 |||||| || |||||||||||| Sbjct: 481 agcagataacagtggagctcga 460 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/48 (93%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 2148 gatttaatgaaaattaataaatcttttaatataattgctatgcttagt 2101
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 829 bits (418), Expect = 0.0 Identities = 525/562 (93%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 80578 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaatggaaaatcctgccga 80519 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80518 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 80459 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 80458 gcgagacagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 80399 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 80398 atatgggtgcgtatatttcccgacaaaccggttacaataagacccacagaaacacgtatg 80339 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 80338 ggctcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 80279 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 80278 tatgaaatgagcggagtatccgaaactgtagctagagcagctatctctatagctgccagt 80219 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaa-aggggtat 477 |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||| Sbjct: 80218 aaaatgcccatacgaagtcaatttcttcgattagagatatagaaccccaaaaaggagtat 80159 Query: 478 ggaagnnnnnnnntgcccggtttttctttctggaaagacaatatttctttcatccttttg 537 |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 80158 tgaagataaaaaacccctggtttttctttctggaaagacaatatttctttcatccttttg 80099 Query: 538 cattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatgt 597 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80098 cattgaaataacaaatggaaatcaaaataatatgattcaacctcagacccttttaaatgt 80039 Query: 598 agcagacaatagtggagctcga 619 |||||| || |||||||||||| Sbjct: 80038 agcagataacagtggagctcga 80017 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/48 (93%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 81705 gatttaatgaaaattaataaatcttttaatataattgctatgcttagt 81658
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 801 bits (404), Expect = 0.0 Identities = 419/424 (98%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 77919 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcctgccga 77860 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77859 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 77800 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77799 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 77740 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 77739 atatgggtacgtatatttcccgacaaaccggttacactaagacccacagaaacacgtatg 77680 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 77679 ggctcgggaaaggggtcccccgaatattgggtatccgttgttaaacctggtcgtatactt 77620 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77619 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagctgccagt 77560 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaaaggggtatg 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77559 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaaaggggtatg 77500 Query: 479 gaag 482 |||| Sbjct: 77499 gaag 77496 Score = 240 bits (121), Expect = 5e-60 Identities = 127/129 (98%) Strand = Plus / Minus Query: 491 tgcccggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataaca 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77483 tgcccggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataaca 77424 Query: 551 aattgaaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagt 610 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 77423 aattgaaatcaaaataatatgattcaacctcagacccttttaaatgtagccgataatagt 77364 Query: 611 ggagctcga 619 ||||||||| Sbjct: 77363 ggagctcga 77355 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/48 (95%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatn-tttaatataattgctatgcttagt 58 |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 79010 gatttaatgaaaattgataaatcatttaatataattgctatgcttagt 78963
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 658 bits (332), Expect = 0.0 Identities = 392/412 (95%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 79920 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 79861 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79860 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 79801 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79800 gcgagacagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 79741 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 79740 atatgggtgcgtatatttcccgacaaaccggttacaataagacccacagaaacacgtatg 79681 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 79680 ggctcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 79621 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 79620 tatgaaatgagcggagtatccgaaactgtagctagagcagctatctctatagctgccagt 79561 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaaa 470 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 79560 aaaatgcccatacgaagtcaatttcttcgattagagatatagaaccccaaaa 79509 Score = 214 bits (108), Expect = 3e-52 Identities = 120/124 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 79482 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaatgg 79423 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 79422 aaatccaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 79363 Query: 616 tcga 619 |||| Sbjct: 79362 tcga 79359 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||| | |||| ||| ||||||||||||||||||||| Sbjct: 81010 gatttaatgaaaattaagaaatcttttaatataattgctatgcttagt 80963
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 658 bits (332), Expect = 0.0 Identities = 392/412 (95%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 79936 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 79877 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79876 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 79817 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79816 gcgagacagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 79757 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 79756 atatgggtgcgtatatttcccgacaaaccggttacaataagacccacagaaacacgtatg 79697 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 79696 ggctcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 79637 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 79636 tatgaaatgagcggagtatccgaaactgtagctagagcagctatctctatagctgccagt 79577 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaaa 470 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 79576 aaaatgcccatacgaagtcaatttcttcgattagagatatagaaccccaaaa 79525 Score = 214 bits (108), Expect = 3e-52 Identities = 120/124 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 79498 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaatgg 79439 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 79438 aaatccaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 79379 Query: 616 tcga 619 |||| Sbjct: 79378 tcga 79375 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||| | |||| ||| ||||||||||||||||||||| Sbjct: 81037 gatttaatgaaaattaagaaatcttttaatataattgctatgcttagt 80990
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 658 bits (332), Expect = 0.0 Identities = 392/412 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 657 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 716 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 717 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 776 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 777 gcgagacagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 836 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 837 atatgggtgcgtatatttcccgacaaaccggttacaataagacccacagaaacacgtatg 896 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 897 ggctcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 956 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 957 tatgaaatgagcggagtatccgaaactgtagctagagcagctatctctatagctgccagt 1016 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatatagaaccctaaaa 470 |||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 1017 aaaatgcccatacgaagtcaatttcttcgattagagatatagaaccccaaaa 1068 Score = 161 bits (81), Expect = 3e-36 Identities = 101/105 (96%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 497 gtttttctttctggaaagacaatatttctttcatccttttgca-ttgaaataacaaattg 555 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1096 gtttttctttctggaaagacaatatttctttcatccttttgcatttgaaataacaaatgg 1155 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagc 600 ||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1156 aaa-ccaaataatatgattcaacctcagacccttttaaatgtagc 1199
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 78143 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 78084 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 78083 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 78024 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 78023 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77964 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 77963 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 77904 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77903 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77844 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 77843 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 77784 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77783 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77743 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77705 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 77646 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 77645 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 77586 Query: 616 tcga 619 |||| Sbjct: 77585 tcga 77582 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 79250 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 79203
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 78143 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 78084 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 78083 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 78024 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 78023 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77964 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 77963 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 77904 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77903 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77844 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 77843 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 77784 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77783 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77743 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77705 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 77646 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 77645 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 77586 Query: 616 tcga 619 |||| Sbjct: 77585 tcga 77582 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 79250 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 79203
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 54154 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 54095 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 54094 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 54035 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 54034 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 53975 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 53974 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 53915 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 53914 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 53855 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 53854 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 53795 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 53794 aaaatgcccatacgaagtcaatttcttcggttagaaatata 53754 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53716 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 53657 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 53656 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 53597 Query: 616 tcga 619 |||| Sbjct: 53596 tcga 53593 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 55256 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 55209
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 126982 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 126923 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 126922 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 126863 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 126862 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 126803 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 126802 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 126743 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 126742 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 126683 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 126682 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 126623 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 126622 aaaatgcccatacgaagtcaatttcttcggttagaaatata 126582 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126544 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 126485 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 126484 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 126425 Query: 616 tcga 619 |||| Sbjct: 126424 tcga 126421 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 128084 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 128037
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 23180959 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 23181018 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 23181019 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 23181078 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 23181079 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 23181138 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 23181139 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 23181198 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23181199 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 23181258 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 23181259 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 23181318 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 23181319 aaaatgcccatacgaagtcaatttcttcggttagaaatata 23181359 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23181397 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 23181456 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 23181457 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 23181516 Query: 616 tcga 619 |||| Sbjct: 23181517 tcga 23181520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 23179872 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 23179919 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 tttaatataattgctatgcttagt 58 |||||||||||| ||||||||||| Sbjct: 19457850 tttaatataattcctatgcttagt 19457827
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 12756695 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 12756636 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 12756635 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 12756576 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12756575 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 12756516 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 12756515 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 12756456 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12756455 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 12756396 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 12756395 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 12756336 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 12756335 aaaatgcccatacgaagtcaatttcttcggttagaaatata 12756295 Score = 557 bits (281), Expect = e-155 Identities = 372/401 (92%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||||||||||| || |||||||||| |||| Sbjct: 19544886 cccaaaagaaccagatttcgtaaacaacatagaggaagaataaagggaaaatcctaccga 19544945 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 19544946 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacctacttggattacg 19545005 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 19545006 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtgttggaaaa 19545065 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 19545066 atctgg-tacgtatatttcccgacaaaccggttacaataagaccgacggaaacacgtatg 19545124 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 19545125 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaagtcgaatactt 19545184 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| ||||||| |||||| |||||||||||||||| |||||||| ||||| Sbjct: 19545185 tatgaaatgggcagagtatccgaaactatagctagagcagctatttccatagctgccagc 19545244 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 19545245 aaaatgcccatacgaagtcaatttcttcggttagaaatata 19545285 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19545324 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 19545383 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 19545384 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 19545443 Query: 616 tcga 619 |||| Sbjct: 19545444 tcga 19545447 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12756257 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 12756198 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 12756197 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 12756138 Query: 616 tcga 619 |||| Sbjct: 12756137 tcga 12756134 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 538 cattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatgt 597 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 3109425 cattgaaataacaaattgacatcaaaataatatgattcaacctcaaacccttttaaatgt 3109366 Query: 598 ag 599 || Sbjct: 3109365 ag 3109364 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 12757797 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 12757750 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaat-ntttaatataattgctatgcttagt 58 ||||||||||||||||| |||| ||||||| |||||||||| ||||| Sbjct: 19543792 gatttaatgaaaattgagaaatcttttaataaaattgctatgtttagt 19543839 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 534 tttgcattgaaataacaaattgaaa 558 ||||||||||||| ||||||||||| Sbjct: 4108978 tttgcattgaaattacaaattgaaa 4108954
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 131607 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 131666 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131667 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 131726 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131727 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 131786 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 131787 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 131846 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131847 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 131906 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 131907 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 131966 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 131967 aaaatgcccatacgaagtcaatttcttcggttagaaatata 132007 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132045 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 132104 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 132105 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 132164 Query: 616 tcga 619 |||| Sbjct: 132165 tcga 132168 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 130520 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 130567
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 15721 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 15780 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 15781 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 15840 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 15841 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 15900 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 15901 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 15960 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 15961 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 16020 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 16021 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 16080 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 16081 aaaatgcccatacgaagtcaatttcttcggttagaaatata 16121 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16159 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 16218 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 16219 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 16278 Query: 616 tcga 619 |||| Sbjct: 16279 tcga 16282 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 14634 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 14681
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 590 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 649 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 650 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 709 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 710 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 769 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 770 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 829 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 830 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 889 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 890 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 949 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 950 aaaatgcccatacgaagtcaatttcttcggttagaaatata 990 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 1087 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1088 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1147 Query: 616 tcga 619 |||| Sbjct: 1148 tcga 1151
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 613 bits (309), Expect = e-172 Identities = 378/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 805 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 864 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 865 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 924 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 925 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 984 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 985 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 1044 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1045 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 1104 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 1105 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 1164 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 1165 aaaatgcccatacgaagtcaatttcttcggttagaaatata 1205 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 1302 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1303 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1362 Query: 616 tcga 619 |||| Sbjct: 1363 tcga 1366
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 78087 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 78028 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 78027 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 77968 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 77967 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77908 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 77907 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 77848 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77847 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77788 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 77787 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 77728 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77727 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77687 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77646 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 77587 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 77586 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 77527 Query: 616 tcga 619 |||| Sbjct: 77526 tcga 77523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 79193 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 79146
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 72609 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 72668 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 72669 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 72728 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 72729 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 72788 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 72789 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 72848 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 72849 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 72908 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 72909 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 72968 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 72969 aaaatgcccatacgaagtcaatttcttcggttagaaatata 73009 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73088 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 73147 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 73148 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 73207 Query: 616 tcga 619 |||| Sbjct: 73208 tcga 73211 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 71504 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 71551 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 425 cccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||| |||| ||||| ||||| Sbjct: 73015 cccatacgaagtcaatttcttcggttagaaatata 73049
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 76332 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 76273 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 76272 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 76213 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 76212 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 76153 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 76152 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 76093 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 76092 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 76033 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 76032 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 75973 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 75972 aaaatgcccatacgaagtcaatttcttcggttagaaatata 75932 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75893 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 75834 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 75833 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 75774 Query: 616 tcga 619 |||| Sbjct: 75773 tcga 75770 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 77430 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 77383
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 10396 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 10337 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 10336 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 10277 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10276 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 10217 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 10216 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 10157 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10156 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 10097 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 10096 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 10037 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 10036 aaaatgcccatacgaagtcaatttcttcggttagaaatata 9996 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9957 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 9898 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 9897 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 9838 Query: 616 tcga 619 |||| Sbjct: 9837 tcga 9834 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 11494 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 11447
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 9191536 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 9191595 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 9191596 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 9191655 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9191656 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 9191715 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 9191716 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 9191775 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9191776 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 9191835 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 9191836 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 9191895 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 9191896 aaaatgcccatacgaagtcaatttcttcggttagaaatata 9191936 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 9114583 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 9114642 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 9114643 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 9114702 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9114703 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 9114762 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 9114763 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 9114822 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9114823 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 9114882 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 9114883 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 9114942 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 9114943 aaaatgcccatacgaagtcaatttcttcggttagaaatata 9114983 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192015 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 9192074 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 9192075 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 9192134 Query: 616 tcga 619 |||| Sbjct: 9192135 tcga 9192138 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9115062 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 9115121 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 9115122 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 9115181 Query: 616 tcga 619 |||| Sbjct: 9115182 tcga 9115185 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 9190431 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 9190478 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 9113478 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 9113525 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 425 cccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||| |||| ||||| ||||| Sbjct: 9191942 cccatacgaagtcaatttcttcggttagaaatata 9191976 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 425 cccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||| |||| ||||| ||||| Sbjct: 9114989 cccatacgaagtcaatttcttcggttagaaatata 9115023
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 10369940 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 10369881 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 10369880 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 10369821 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10369820 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 10369761 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 10369760 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 10369701 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10369700 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 10369641 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 10369640 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 10369581 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 10369580 aaaatgcccatacgaagtcaatttcttcggttagaaatata 10369540 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10369501 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 10369442 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 10369441 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 10369382 Query: 616 tcga 619 |||| Sbjct: 10369381 tcga 10369378 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 10371038 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 10370991
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 14455550 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 14455609 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 14455610 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 14455669 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 14455670 gcgaggcagatagaagcaggatgaagagcaatgacacgatatgcacgtcgtggtggaaaa 14455729 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 14455730 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 14455789 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 14455790 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 14455849 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 14455850 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 14455909 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 14455910 aaaatgcccatacgaagtcaatttcttcggttagaaatata 14455950 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 11895739 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 11895798 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 11895799 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 11895858 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11895859 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 11895918 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 11895919 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacatatg 11895978 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11895979 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 11896038 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 11896039 tataaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgctagc 11896098 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 11896099 aaaatgcccatacgaagtcaatttcttcggttagaaatata 11896139 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 11896178 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 11896237 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 11896238 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 11896297 Query: 616 tcga 619 |||| Sbjct: 11896298 tcga 11896301 Score = 153 bits (77), Expect = 8e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14455988 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 14456047 Query: 556 aaatcaaaataatatgattca 576 ||||||||||||||||||||| Sbjct: 14456048 aaatcaaaataatatgattca 14456068 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 14454449 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 14454496 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 11894657 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 11894704
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 33497909 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 33497850 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 33497849 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 33497790 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 33497789 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 33497730 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 33497729 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 33497670 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 33497669 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 33497610 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 33497609 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 33497550 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 33497549 aaaatgcccatacgaagtcaatttcttcggttagaaatata 33497509 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33497471 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 33497412 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 33497411 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 33497352 Query: 616 tcga 619 |||| Sbjct: 33497351 tcga 33497348 Score = 89.7 bits (45), Expect = 1e-14 Identities = 113/135 (83%), Gaps = 8/135 (5%) Strand = Plus / Plus Query: 261 acaaaccggttacactaagacccacggaaacacgtatgggctcgggaaaggggtcccccg 320 |||||| ||||||| |||||||||| ||| ||| ||||| ||| ||||||| ||| | | Sbjct: 15131457 acaaactggttacaataagacccacagaagcacatatggattcgagaaagggatccac-g 15131515 Query: 321 aatattgggtagcc-------gttgttaaaccaggtcgtatactttatgaaatgggggga 373 |||||||||||||| ||||||||||||||||| |||||||||||| ||| ||| Sbjct: 15131516 aatattgggtagcccgtagccgttgttaaaccaggtcgagtactttatgaaaagggcgga 15131575 Query: 374 gtatctgaaactgta 388 ||||||||||||||| Sbjct: 15131576 gtatctgaaactgta 15131590 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 atgctcttcaagcacttgaa 163 |||||||||||||||||||| Sbjct: 36440985 atgctcttcaagcacttgaa 36441004 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/43 (88%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaat-ntttaatataattgctatgc 53 ||||||||||||||| | |||| ||||||| ||||||||||| Sbjct: 17404735 gatttaatgaaaattaagaaatcttttaataaaattgctatgc 17404693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 tttaatataattgctatgct 54 |||||||||||||||||||| Sbjct: 10776945 tttaatataattgctatgct 10776926
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 43106 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 43047 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 43046 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 42987 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 42986 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 42927 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 42926 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 42867 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 42866 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 42807 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 42806 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 42747 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 42746 aaaatgcccatacgaagtcaatttcttcggttagaaatata 42706 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42668 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 42609 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 42608 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 42549 Query: 616 tcga 619 |||| Sbjct: 42548 tcga 42545
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 147353 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 147412 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 147413 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 147472 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 147473 gcgaggcagatagaagcaggatgaagagcaatgacacgatatgcacgtcgtggtggaaaa 147532 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 147533 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 147592 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 147593 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 147652 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 147653 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 147712 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 147713 aaaatgcccatacgaagtcaatttcttcggttagaaatata 147753 Score = 153 bits (77), Expect = 8e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147791 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 147850 Query: 556 aaatcaaaataatatgattca 576 ||||||||||||||||||||| Sbjct: 147851 aaatcaaaataatatgattca 147871 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 146252 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 146299
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 55115 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 55174 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 55175 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 55234 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 55235 gcgaggcagatagaagcaggatgaagagcaatgacacgatatgcacgtcgtggtggaaaa 55294 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 55295 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 55354 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 55355 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 55414 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 55415 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 55474 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 55475 aaaatgcccatacgaagtcaatttcttcggttagaaatata 55515 Score = 153 bits (77), Expect = 8e-34 Identities = 80/81 (98%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55553 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 55612 Query: 556 aaatcaaaataatatgattca 576 ||||||||||||||||||||| Sbjct: 55613 aaatcaaaataatatgattca 55633 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 54014 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 54061
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 10375979 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 10375920 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 10375919 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 10375860 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10375859 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 10375800 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 10375799 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 10375740 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10375739 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 10375680 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 10375679 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 10375620 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 10375619 aaaatgcccatacgaagtcaatttcttcggttagaaatata 10375579 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10375540 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 10375481 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 10375480 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 10375421 Query: 616 tcga 619 |||| Sbjct: 10375420 tcga 10375417 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 10377077 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 10377030
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 605 bits (305), Expect = e-170 Identities = 377/401 (94%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 78087 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 78028 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 78027 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 77968 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 77967 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77908 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 77907 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 77848 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77847 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77788 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 77787 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 77728 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77727 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77687 Score = 214 bits (108), Expect = 3e-52 Identities = 120/124 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77648 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 77589 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct: 77588 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagcggagc 77529 Query: 616 tcga 619 |||| Sbjct: 77528 tcga 77525 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 79190 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 79143
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 597 bits (301), Expect = e-167 Identities = 376/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 581 cccaaaagaaccagatttcgtaaacaacataggggaagaatgaagggaaaatcctaccga 640 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 641 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 700 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 701 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 760 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 761 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 820 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 821 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 880 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 881 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 940 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 941 aaaatgcccatacgaagtcaatttcttcggttagaaatata 981 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 1079 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1080 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1139 Query: 616 tcga 619 |||| Sbjct: 1140 tcga 1143
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 597 bits (301), Expect = e-167 Identities = 376/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 581 cccaaaagaaccagatttcgtaaacaacataggggaagaatgaagggaaaatcctaccga 640 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 641 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 700 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 701 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 760 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 761 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 820 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 821 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 880 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 881 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 940 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 941 aaaatgcccatacgaagtcaatttcttcggttagaaatata 981 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 1079 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1080 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1139 Query: 616 tcga 619 |||| Sbjct: 1140 tcga 1143
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 597 bits (301), Expect = e-167 Identities = 376/401 (93%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 78130 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 78071 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 78070 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 78011 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 78010 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77951 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 77950 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 77891 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77890 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77831 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||| |||||| |||||||| ||||| Sbjct: 77830 tatgaaatgggcggagtatccgaaactgtagctagacgagctatttccatagctgccagc 77771 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77770 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77730 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77692 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 77633 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 77632 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 77573 Query: 616 tcga 619 |||| Sbjct: 77572 tcga 77569 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 79237 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 79190
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 597 bits (301), Expect = e-167 Identities = 376/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 9258918 cccaaaagaaccagatttcgtaaacaacataggggaagaatgaagggaaaatcctaccga 9258977 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 9258978 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 9259037 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9259038 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 9259097 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 9259098 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 9259157 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9259158 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 9259217 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 9259218 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 9259277 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 9259278 aaaatgcccatacgaagtcaatttcttcggttagaaatata 9259318 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9259357 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 9259416 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 9259417 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 9259476 Query: 616 tcga 619 |||| Sbjct: 9259477 tcga 9259480 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 9257821 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 9257868
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 597 bits (301), Expect = e-167 Identities = 376/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| Sbjct: 70131 cccaaaagaaccagatttcgtaaacaacataggggaagaatgaagggaaaatcctaccga 70190 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 70191 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 70250 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 70251 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 70310 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 70311 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacgtatg 70370 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 70371 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 70430 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 70431 tatgaaatgggcggagtatccgaaactgtagctagagtagctatttccatagctgccagc 70490 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 70491 aaaatgcccatacgaagtcaatttcttcggttagaaatata 70531 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70570 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 70629 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 70630 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 70689 Query: 616 tcga 619 |||| Sbjct: 70690 tcga 70693 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 69034 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 69081
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 567 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 626 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 627 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 686 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 687 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 746 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 747 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacatatg 806 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 807 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 866 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 867 tataaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgctagc 926 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 927 aaaatgcccatacgaagtcaatttcttcggttagaaatata 967 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1006 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 1065 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 1066 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 1125 Query: 616 tcga 619 |||| Sbjct: 1126 tcga 1129
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 782 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 841 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 842 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 901 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 902 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 961 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 962 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacatatg 1021 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1022 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 1081 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 1082 tataaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgctagc 1141 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 1142 aaaatgcccatacgaagtcaatttcttcggttagaaatata 1182 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1221 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 1280 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 1281 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 1340 Query: 616 tcga 619 |||| Sbjct: 1341 tcga 1344
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 580 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 639 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 640 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 699 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 700 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 759 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 760 atctgggtacgtatatttcccgacaaaccggttacaataagactgaccgaaacacgtatg 819 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 820 ggttcgggaaagggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactt 879 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 880 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 939 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| | || ||||| ||||| Sbjct: 940 aaaatgcccatacgaagtcaatttctccggttagaaatata 980 Score = 210 bits (106), Expect = 4e-51 Identities = 118/122 (96%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1018 ggttcttctttctggaaagacgatatttctttcatccttttgcattgaaataacaaattg 1077 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1078 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1137 Query: 616 tc 617 || Sbjct: 1138 tc 1139
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 580 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 639 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 640 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 699 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 700 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 759 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 760 atctgggtacgtatatttcccgacaaaccggttacaataagactgaccgaaacacgtatg 819 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 820 ggttcgggaaagggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactt 879 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 880 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 939 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| | || ||||| ||||| Sbjct: 940 aaaatgcccatacgaagtcaatttctccggttagaaatata 980 Score = 210 bits (106), Expect = 4e-51 Identities = 118/122 (96%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1018 ggttcttctttctggaaagacgatatttctttcatccttttgcattgaaataacaaattg 1077 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1078 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 1137 Query: 616 tc 617 || Sbjct: 1138 tc 1139
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 27923626 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 27923567 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 27923566 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 27923507 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27923506 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 27923447 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 27923446 atctgggtacgtatatttcccgacaaaccggttacaataagactgaccgaaacacgtatg 27923387 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 27923386 ggttcgggaaagggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactt 27923327 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 27923326 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 27923267 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| | || ||||| ||||| Sbjct: 27923266 aaaatgcccatacgaagtcaatttctccggttagaaatata 27923226 Score = 210 bits (106), Expect = 4e-51 Identities = 118/122 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27923188 ggttcttctttctggaaagacgatatttctttcatccttttgcattgaaataacaaattg 27923129 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 27923128 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 27923069 Query: 616 tc 617 || Sbjct: 27923068 tc 27923067 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 27924722 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 27924675
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 86984 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 86925 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 86924 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 86865 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86864 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 86805 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 86804 atctgggtacgtatatttcccgacaaaccggttacaataagactgaccgaaacacgtatg 86745 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 86744 ggttcgggaaagggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactt 86685 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 86684 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 86625 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| | || ||||| ||||| Sbjct: 86624 aaaatgcccatacgaagtcaatttctccggttagaaatata 86584 Score = 210 bits (106), Expect = 4e-51 Identities = 118/122 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 86546 ggttcttctttctggaaagacgatatttctttcatccttttgcattgaaataacaaattg 86487 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 86486 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 86427 Query: 616 tc 617 || Sbjct: 86426 tc 86425 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 88080 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 88033
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 12960 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 12901 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 12900 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 12841 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12840 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 12781 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 12780 atctgggtacgtatatttcccgacaaaccggttacaataagactgaccgaaacacgtatg 12721 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 12720 ggttcgggaaagggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactt 12661 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 12660 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 12601 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| | || ||||| ||||| Sbjct: 12600 aaaatgcccatacgaagtcaatttctccggttagaaatata 12560 Score = 210 bits (106), Expect = 4e-51 Identities = 118/122 (96%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12522 ggttcttctttctggaaagacgatatttctttcatccttttgcattgaaataacaaattg 12463 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 12462 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 12403 Query: 616 tc 617 || Sbjct: 12402 tc 12401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 14056 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 14009
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 77229 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 77288 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 77289 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 77348 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 77349 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 77408 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 77409 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacatatg 77468 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77469 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 77528 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 77529 tataaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgctagc 77588 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77589 aaaatgcccatacgaagtcaatttcttcggttagaaatata 77629 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77668 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 77727 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 77728 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 77787 Query: 616 tcga 619 |||| Sbjct: 77788 tcga 77791 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/48 (91%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaatnttt-aatataattgctatgcttagt 58 ||||||||||||||||| |||| ||| |||| |||||||||||||||| Sbjct: 76147 gatttaatgaaaattgagaaatcttttaataaaattgctatgcttagt 76194
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 589 bits (297), Expect = e-165 Identities = 375/401 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 219 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 278 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 279 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 338 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 339 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtggtggaaaa 398 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 399 atctgggtacgtatatttcccgacaaaccggttacaataagaccgaccgaaacacatatg 458 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 459 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaggtcgaatactt 518 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||| ||||||| |||||||| ||||||||||||||||||||||| |||||||| || || Sbjct: 519 tataaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgctagc 578 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 579 aaaatgcccatacgaagtcaatttcttcggttagaaatata 619 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 658 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 717 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 718 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 777 Query: 616 tcga 619 |||| Sbjct: 778 tcga 781
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 565 bits (285), Expect = e-158 Identities = 372/401 (92%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 15067 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 15008 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 15007 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 14948 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 14947 gcgaggcagatagaagcgggacgaagagcaatgacacgatatgcacgtcatggtggaaaa 14888 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || | ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 14887 atctaggtacatatatttcccgacaaaccggttacaataagaccaacggaaacacgtatg 14828 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||| Sbjct: 14827 ggttcgggaaagggatcccccgaatattgggtagccattgttaaaccaggtagaatactt 14768 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 14767 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 14708 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||| ||||||||||| |||| ||||| ||||| Sbjct: 14707 aaaatgcccatatgaagtcaatttcttcggttagaaatata 14667 Score = 206 bits (104), Expect = 6e-50 Identities = 113/116 (97%) Strand = Plus / Minus Query: 504 tttctggaaagacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 563 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14620 tttctggaaaaacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 14561 Query: 564 ataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 14560 ataatatgattcaacctcagacccttttaaatgtagcagataacagtggagctcga 14505
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 565 bits (285), Expect = e-158 Identities = 372/401 (92%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 24638881 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 24638822 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 24638821 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 24638762 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 24638761 gcgaggcagatagaagcgggacgaagagcaatgacacgatatgcacgtcatggtggaaaa 24638702 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || | ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 24638701 atctaggtacatatatttcccgacaaaccggttacaataagaccaacggaaacacgtatg 24638642 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||| Sbjct: 24638641 ggttcgggaaagggatcccccgaatattgggtagccattgttaaaccaggtagaatactt 24638582 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 24638581 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 24638522 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||| ||||||||||| |||| ||||| ||||| Sbjct: 24638521 aaaatgcccatatgaagtcaatttcttcggttagaaatata 24638481 Score = 206 bits (104), Expect = 6e-50 Identities = 113/116 (97%) Strand = Plus / Minus Query: 504 tttctggaaagacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 563 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24638434 tttctggaaaaacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 24638375 Query: 564 ataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 24638374 ataatatgattcaacctcagacccttttaaatgtagcagataacagtggagctcga 24638319 Score = 141 bits (71), Expect = 3e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 537 gcattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatg 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 32000719 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 32000660 Query: 597 tagcagacaatagtggagctcga 619 ||||||| || |||||||||||| Sbjct: 32000659 tagcagataacagtggagctcga 32000637
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 565 bits (285), Expect = e-158 Identities = 372/401 (92%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 70927 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 70868 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 70867 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 70808 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 70807 gcgaggcagatagaagcgggacgaagagcaatgacacgatatgcacgtcatggtggaaaa 70748 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || | ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 70747 atctaggtacatatatttcccgacaaaccggttacaataagaccaacggaaacacgtatg 70688 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||| Sbjct: 70687 ggttcgggaaagggatcccccgaatattgggtagccattgttaaaccaggtagaatactt 70628 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 70627 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 70568 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||| ||||||||||| |||| ||||| ||||| Sbjct: 70567 aaaatgcccatatgaagtcaatttcttcggttagaaatata 70527 Score = 206 bits (104), Expect = 6e-50 Identities = 113/116 (97%) Strand = Plus / Minus Query: 504 tttctggaaagacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 563 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70480 tttctggaaaaacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 70421 Query: 564 ataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 70420 ataatatgattcaacctcagacccttttaaatgtagcagataacagtggagctcga 70365
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 565 bits (285), Expect = e-158 Identities = 372/401 (92%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 24556350 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 24556291 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 24556290 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 24556231 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 24556230 gcgaggcagatagaagcgggacgaagagcaatgacacgatatgcacgtcatggtggaaaa 24556171 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || | ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 24556170 atctaggtacatatatttcccgacaaaccggttacaataagaccaacggaaacacgtatg 24556111 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||| |||||||||||||| | |||||| Sbjct: 24556110 ggttcgggaaagggatcccccgaatattgggtagccattgttaaaccaggtagaatactt 24556051 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| Sbjct: 24556050 tatgaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagc 24555991 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||| ||||||||||| |||| ||||| ||||| Sbjct: 24555990 aaaatgcccatatgaagtcaatttcttcggttagaaatata 24555950 Score = 206 bits (104), Expect = 6e-50 Identities = 113/116 (97%) Strand = Plus / Minus Query: 504 tttctggaaagacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 563 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24555903 tttctggaaaaacaatatttctttcatccttttgcattgaaataacaaattgaaatcaaa 24555844 Query: 564 ataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 24555843 ataatatgattcaacctcagacccttttaaatgtagcagataacagtggagctcga 24555788 Score = 141 bits (71), Expect = 3e-30 Identities = 80/83 (96%) Strand = Plus / Minus Query: 537 gcattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatg 596 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 32091231 gcattgaaataacaaattaaaatcaaaataatatgattcaacctcagacccttttaaatg 32091172 Query: 597 tagcagacaatagtggagctcga 619 ||||||| || |||||||||||| Sbjct: 32091171 tagcagataacagtggagctcga 32091149
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 557 bits (281), Expect = e-155 Identities = 372/401 (92%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||||||||||| || |||||||||| |||| Sbjct: 145598 cccaaaagaaccagatttcgtaaacaacatagaggaagaataaagggaaaatcctaccga 145657 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 145658 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacctacttggattacg 145717 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 145718 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtgttggaaaa 145777 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 145778 atctgg-tacgtatatttcccgacaaaccggttacaataagaccgacggaaacacgtatg 145836 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 145837 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaagtcgaatactt 145896 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| ||||||| |||||| |||||||||||||||| |||||||| ||||| Sbjct: 145897 tatgaaatgggcagagtatccgaaactatagctagagcagctatttccatagctgccagc 145956 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 145957 aaaatgcccatacgaagtcaatttcttcggttagaaatata 145997 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146036 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 146095 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 146096 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 146155 Query: 616 tcga 619 |||| Sbjct: 146156 tcga 146159 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaat-ntttaatataattgctatgcttagt 58 ||||||||||||||||| |||| ||||||| |||||||||| ||||| Sbjct: 144504 gatttaatgaaaattgagaaatcttttaataaaattgctatgtttagt 144551
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 557 bits (281), Expect = e-155 Identities = 372/401 (92%), Gaps = 1/401 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||||||||||| || |||||||||| |||| Sbjct: 4785 cccaaaagaaccagatttcgtaaacaacatagaggaagaataaagggaaaatcctaccga 4844 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 4845 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacctacttggattacg 4904 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 4905 gcgaggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcgtgttggaaaa 4964 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 4965 atctgg-tacgtatatttcccgacaaaccggttacaataagaccgacggaaacacgtatg 5023 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5024 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaccaagtcgaatactt 5083 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| ||||||| |||||| |||||||||||||||| |||||||| ||||| Sbjct: 5084 tatgaaatgggcagagtatccgaaactatagctagagcagctatttccatagctgccagc 5143 Query: 419 aaaatgcccatacgaagtcaatttattcgattagagatata 459 |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 5144 aaaatgcccatacgaagtcaatttcttcggttagaaatata 5184 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5223 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 5282 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 5283 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 5342 Query: 616 tcga 619 |||| Sbjct: 5343 tcga 5346 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 12 gatttaatgaaaattgataaat-ntttaatataattgctatgcttagt 58 ||||||||||||||||| |||| ||||||| |||||||||| ||||| Sbjct: 3691 gatttaatgaaaattgagaaatcttttaataaaattgctatgtttagt 3738
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 535 bits (270), Expect = e-149 Identities = 367/398 (92%), Gaps = 1/398 (0%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||| ||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||| Sbjct: 24916200 aaaaggaccagatttcgtaaataacatagaggaataatgaagggaaaatcctaccgaggc 24916259 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||| |||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 24916260 aattgtatttgttttgatagatatgctcttcaagcactt-aacccacttggattacggcg 24916318 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 24916319 aggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcatggtggaaaaatc 24916378 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 24916379 tgggctcgtatatttcccgacaaaccggttacaataagaccgacggaaacacgtatgggt 24916438 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 24916439 tcgggaaagggatccaccgaatattgggtagccgttgttaaaccaggtcgaatactttat 24916498 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaa 421 |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 24916499 gaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagcaaa 24916558 Query: 422 atgcccatacgaagtcaatttattcgattagagatata 459 ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 24916559 atgcccatacgaagtcaatttcttcggttagaaatata 24916596 Score = 198 bits (100), Expect = 2e-47 Identities = 118/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 24916633 ggttcttctttctggaaagacaatatttctttcatctttttgcattgaaatagcaaattg 24916692 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 24916693 aaatcaaaataatataatttaacctcagacccttttaaatgtagcagataatagtggagc 24916752 Query: 616 tcga 619 |||| Sbjct: 24916753 tcga 24916756
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 535 bits (270), Expect = e-149 Identities = 367/398 (92%), Gaps = 1/398 (0%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||| ||||||||||| ||| |||||||||||| |||||| |||||||||| ||||||| Sbjct: 77483 aaaaggaccagatttcgtaaataacatagaggaataatgaagggaaaatcctaccgaggc 77542 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||| |||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 77543 aattgtatttgttttgatagatatgctcttcaagcactt-aacccacttggattacggcg 77601 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 || |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 77602 aggcagatagaagcaggacgaagagcaatgacacgatatgcacgtcatggtggaaaaatc 77661 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 77662 tgggctcgtatatttcccgacaaaccggttacaataagaccgacggaaacacgtatgggt 77721 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 77722 tcgggaaagggatccaccgaatattgggtagccgttgttaaaccaggtcgaatactttat 77781 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaa 421 |||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||| ||| Sbjct: 77782 gaaatgggcggagtatccgaaactgtagctagagcagctatttccatagctgccagcaaa 77841 Query: 422 atgcccatacgaagtcaatttattcgattagagatata 459 ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 77842 atgcccatacgaagtcaatttcttcggttagaaatata 77879 Score = 198 bits (100), Expect = 2e-47 Identities = 118/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 77916 ggttcttctttctggaaagacaatatttctttcatctttttgcattgaaatagcaaattg 77975 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||| Sbjct: 77976 aaatcaaaataatataatttaacctcagacccttttaaatgtagcagataatagtggagc 78035 Query: 616 tcga 619 |||| Sbjct: 78036 tcga 78039
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 448 bits (226), Expect = e-122 Identities = 337/374 (90%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 75461 cccaaaagaatcagatttcgtgaacaacatagaggaagaatgaagggaaaatcctaccga 75520 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 75521 ggcaattgtattcattttggtagatatgctcttcaagcacttgaacccacttggattacg 75580 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || || || ||||||||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct: 75581 gcaaggcatatagaagcaggacaaagagcaatgacacgatatgcacgtcatggtggaaaa 75640 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 75641 atctgggtacgtatatttcccgacaaactagttacaataagaccgacggaaacacgtatg 75700 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 75701 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaaaaggccgaatactt 75760 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||| | ||| | ||||||||||||||||| |||||||| |||| Sbjct: 75761 tatgaaatgggtggagtacccgaagcagtagctagagcagctatttccatagctgccacc 75820 Query: 419 aaaatgcccatacg 432 |||||||| ||||| Sbjct: 75821 aaaatgcctatacg 75834
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 448 bits (226), Expect = e-122 Identities = 337/374 (90%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 9208559 cccaaaagaatcagatttcgtgaacaacatagaggaagaatgaagggaaaatcctaccga 9208500 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 9208499 ggcaattgtattcattttggtagatatgctcttcaagcacttgaacccacttggattacg 9208440 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || || || ||||||||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct: 9208439 gcaaggcatatagaagcaggacaaagagcaatgacacgatatgcacgtcatggtggaaaa 9208380 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 9208379 atctgggtacgtatatttcccgacaaactagttacaataagaccgacggaaacacgtatg 9208320 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 9208319 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaaaaggccgaatactt 9208260 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||| | ||| | ||||||||||||||||| |||||||| |||| Sbjct: 9208259 tatgaaatgggtggagtacccgaagcagtagctagagcagctatttccatagctgccacc 9208200 Query: 419 aaaatgcccatacg 432 |||||||| ||||| Sbjct: 9208199 aaaatgcctatacg 9208186
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 448 bits (226), Expect = e-122 Identities = 337/374 (90%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||| ||||||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 9280256 cccaaaagaatcagatttcgtgaacaacatagaggaagaatgaagggaaaatcctaccga 9280197 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 9280196 ggcaattgtattcattttggtagatatgctcttcaagcacttgaacccacttggattacg 9280137 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || || || ||||||||||||| ||||||||| |||||||||||||||| |||||||||| Sbjct: 9280136 gcaaggcatatagaagcaggacaaagagcaatgacacgatatgcacgtcatggtggaaaa 9280077 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 9280076 atctgggtacgtatatttcccgacaaactagttacaataagaccgacggaaacacgtatg 9280017 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||||||||| |||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 9280016 ggttcgggaaagggatcccccgaatattgggtagccgttgttaaaaaaggccgaatactt 9279957 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||| | ||| | ||||||||||||||||| |||||||| |||| Sbjct: 9279956 tatgaaatgggtggagtacccgaagcagtagctagagcagctatttccatagctgccacc 9279897 Query: 419 aaaatgcccatacg 432 |||||||| ||||| Sbjct: 9279896 aaaatgcctatacg 9279883
>dbj|AB077365.1| Iris dichotoma plastid DNA, intron region Length = 566 Score = 428 bits (216), Expect = e-117 Identities = 334/372 (89%), Gaps = 1/372 (0%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 130 |||||||| ||||||||||||||||||| ||| |||| ||| | |||||||||| |||| Sbjct: 9 agatttcgtaaacaacatagaggaagaa-gaagggaatatcttgtcgaggcaatcatatt 67 Query: 131 tgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagacagata 190 |||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| ||| Sbjct: 68 tgttttggcagatatgctcttcaggcacttgaacccgcttggatcacagctagacaaata 127 Query: 191 gaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggtacgt 250 |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 128 gaagcagggcgaagagcaatgacacgatatgcgcgtcgtggtggaaaaatatgggtacgt 187 Query: 251 atatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcgggaaag 310 ||||||||||||||||| ||||| |||||| ||||||||||||||||| || || ||| Sbjct: 188 atatttcccgacaaacccattacagtaagactgacggaaacacgtatgggttcagggaag 247 Query: 311 gggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatgggg 370 || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 248 ggatcccccgaatattgggtatccgttgttaaaccaggtcgaatactttatgaaatgggc 307 Query: 371 ggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccata 430 |||||||| ||||||||||| ||||||||||| || ||||| || | |||||||| ||| Sbjct: 308 ggagtatcagaaactgtagccagagcagctatttcaatagctgcgtgcaaaatgcctata 367 Query: 431 cgaagtcaattt 442 |||| ||||||| Sbjct: 368 cgaactcaattt 379 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 569 atgattcaacctcagacccttttaaatg 596 |||||||||||||||||||||||||||| Sbjct: 531 atgattcaacctcagacccttttaaatg 558
>gb|AF446052.1|AF446051S2 Hordeum vulgare Rpl16 (rpl16) gene, exon 2 and partial cds; chloroplast genes for chloroplast products Length = 406 Score = 422 bits (213), Expect = e-115 Identities = 213/213 (100%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 253 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 313 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 373 Query: 239 atatgggtacgtatatttcccgacaaaccggtt 271 ||||||||||||||||||||||||||||||||| Sbjct: 374 atatgggtacgtatatttcccgacaaaccggtt 406
>gb|DQ069420.1| Yucca schidigera ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 390 Score = 420 bits (212), Expect = e-114 Identities = 341/384 (88%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| || |||||||||||||||||||| |||| ||| | || Sbjct: 4 cccaaaagaaccagatttcgtaagcaacatagaggaagaatgaagggaatatcttgtcgg 63 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||| |||| || ||||| |||||||| |||||||||||||||||||||||| Sbjct: 64 ggcaatcagattagtttcggcagatacgctcttcaggcacttgaacccgcttggatcacg 123 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 124 gctagacaaatagaagcagggcgaagagcaatgacacgatatgcgcgtcgcggtggaaaa 183 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||||||||||||||||||||| |||||| ||||||| || |||||||||||| Sbjct: 184 atatgggtacgtatatttcccgacaaacctgttacagtaagacctacagaaacacgtatg 243 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| ||||| |||||||||||||||||| | ||||||||||||||||| |||||| Sbjct: 244 ggttcggggaagggatcccccgaatattgggtatctgttgttaaaccaggtcgaatactt 303 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||| ||| ||||||| || ||||| || | Sbjct: 304 tatgaaatgggtggagtatccgaaactgtagccagaacagctatttcaatagctgcgtgc 363 Query: 419 aaaatgcccatacgaagtcaattt 442 |||||||| ||||||| ||||||| Sbjct: 364 aaaatgcctatacgaactcaattt 387
>gb|DQ069419.1| Typha latifolia ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 408 Score = 420 bits (212), Expect = e-114 Identities = 341/384 (88%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 13 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaatatcttgtcga 72 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||| |||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 73 ggcaatcatatttcttttggcagatacgctcttcaggcacttgaacccgcttggatcaca 132 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || ||||| ||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 133 gctagacaaatagaagcagggcgaagggcaatgacacgatatgcgcgtcgcggtggaaaa 192 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| Sbjct: 193 atatgggtacgtatatttcccgacaaacctattacactaagacctgcagaaacacgtatg 252 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || || || || |||||||||||||||||| ||||||||||||| ||||| || ||| Sbjct: 253 ggttccggtaaaggatcccccgaatattgggtatccgttgttaaaccgggtcgaatcctt 312 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| |||||||||||||||||||||||| | ||||| || | Sbjct: 313 tatgaaatgggtggagtatcagaaactgtagctagagcagctatcgcaatagctgcgcgc 372 Query: 419 aaaatgcccatacgaagtcaattt 442 |||||||| ||||||| ||||||| Sbjct: 373 aaaatgcctatacgaactcaattt 396
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 418 bits (211), Expect = e-114 Identities = 340/383 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 82819 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaatatcttatcga 82760 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||| |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 82759 ggcaatcatatttgtttcggtagatacgctcttcaagcacttgaaccctcttggatcaca 82700 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| ||||||||||| || ||||| |||||| Sbjct: 82699 tctagacaaatagaagcagggcgacgagcaatgacacgatatgcgcgccgtggcggaaaa 82640 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| Sbjct: 82639 atatgggtacgtatatttcccgacaaacccgttacagtaagacctacggaaacacgtatg 82580 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || |||||||||||||||||| | || |||||||||||||| |||||| Sbjct: 82579 ggttcggggaaaggatcccccgaatattgggtatctgtcgttaaaccaggtcgaatactt 82520 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||||| ||||||||||| ||||| ||||| || ||||| || | Sbjct: 82519 tatgaaatgggcggagtatccgaaactgtagccagagcggctatttcaatagctgcgtgc 82460 Query: 419 aaaatgcccatacgaagtcaatt 441 |||||||| ||||||| |||||| Sbjct: 82459 aaaatgcctatacgaactcaatt 82437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||| ||||||||||||||||||||| ||| |||||||| ||||| || || |||||| Sbjct: 82295 aaaatgatatgattcaacctcagacccatttgaatgtagcggacaacagcggggctcga 82237
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 367 bits (185), Expect = 3e-98 Identities = 293/329 (89%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||||||||||||||| |||||||||||||| |||||||| |||| ||| | ||||||| Sbjct: 83472 aaaagaaccagatttcgtaaacaacatagaggtagaatgaagggaatatcttgccgaggc 83413 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||| |||||||||||| ||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 83412 aatcatatttgttttggcagatacgctcttcaggcacttgaacctgcttggatcacagct 83353 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 83352 agacaaatagaagcaggacgaagagcaatgacacgatatgcgcgtcgtggtggaaagata 83293 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||||||| Sbjct: 83292 tgggtacgtatctttcccgacaaacctgttactgtaagacctacagaaacacgtatgggt 83233 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || |||||||||||||||||| ||||||||||||| || || ||| ||||| Sbjct: 83232 tccggcaaaggatcccccgaatattgggtatccgttgttaaaccgggccgaataatttat 83173 Query: 362 gaaatggggggagtatctgaaactgtagc 390 |||||| | |||||||||||| ||||||| Sbjct: 83172 gaaatgagtggagtatctgaagctgtagc 83144 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 540 ttgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaaatgtag 599 ||||||||| | ||| || | ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 82979 ttgaaataagagattaaattaaaaatgatatgattcaacctcagacccttttgaatgtag 82920 Query: 600 cagacaatagtggagctc 617 | || || |||||||||| Sbjct: 82919 cggataacagtggagctc 82902
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 365 bits (184), Expect = 1e-97 Identities = 304/344 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||| ||||| ||||||||||||||||||||||||||| ||| | || Sbjct: 87515 cccaaaagaaccaggtttcgtaaacaacatagaggaagaatgaaaggagtatcttatcgg 87456 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 87455 ggcaatcgtatttgtttcggtagatatgcgcttcaggcacttgaacccgcttggatcaca 87396 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| || | ||||| |||||||||| |||||||| |||||| Sbjct: 87395 tctagacaaatagaagcagggcgccgggcaatctcacgatatgcccgtcgtggcggaaaa 87336 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 87335 atatgggtacgtatattccccgacaaacccgttacactaagacccgcggaaacacgtatg 87276 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| ||||| || ||||||||||||||| |||| |||||||| | ||| |||||| Sbjct: 87275 ggttcggggaagggatctcccgaatattgggtatccgtcgttaaaccggatcgaatactt 87216 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 87215 tatgaaatgggcggagtatcagaaaccgtagccagagccgctat 87172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||||||||||||||||||||| |||||||| ||||| || ||||| Sbjct: 86979 atgattcaacctcagacccttttgaatgtagcggacaacagcggagc 86933
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 363 bits (183), Expect = 5e-97 Identities = 333/383 (86%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 86436 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 86377 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 86376 ggtaatcgtatttgtttcggtagatacgctcttcaagcacttgaacctgcttggatcaca 86317 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| |||||||| || ||| ||||||| |||||| | | ||| |||||||||||| Sbjct: 86316 tctagacaaatagaagcggggcgacgagcaatgacacgaaacgtacgccgtggtggaaaa 86257 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||| Sbjct: 86256 atatgggtacgtatatttccagacaaaccagttacagtaagacctacggaaacacgtatg 86197 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || |||||||||||||||||||| || |||||||||||| | |||||| Sbjct: 86196 ggttcggggaaaggatcccccgaatattgggtagctgtcgttaaaccaggtagaatactt 86137 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| |||||| | |||| | |||||||| |||||| || |||||||| Sbjct: 86136 tatgaaatgggcggagtagcagaaaatatagctagaaaagctatttcaatagcggcgtcc 86077 Query: 419 aaaatgcccatacgaagtcaatt 441 |||||||| ||||||| |||||| Sbjct: 86076 aaaatgcctatacgaactcaatt 86054 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaa 606 ||||| ||||||||||||| ||||||| ||| |||||||| ||||| Sbjct: 85918 aaaatgatatgattcaaccccagacccatttgaatgtagcggacaa 85873 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 87520 atataattgctatgcttagt 87501
>gb|DQ069415.1| Acorus americanus ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 390 Score = 357 bits (180), Expect = 3e-95 Identities = 303/344 (88%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| || | ||| Sbjct: 4 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatgtcttatcga 63 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||| || ||||||||| || ||||| |||||||| ||||||||||| |||||||||| Sbjct: 64 ggcagtcatatttgtttcggaagatacgctcttcaggcacttgaaccatcttggatcaca 123 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| |||||||| || ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 124 tctagacaaatagaagcggggcgaagggcaatgacacgatatgcacgtcgtggtggaaaa 183 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||| Sbjct: 184 atctgggtacgtatatttccggacaaacccgttacaataagacccgcggaaacacgtatg 243 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| ||||| ||||||||||| |||||| ||||||||||||| ||||| |||||| Sbjct: 244 ggttcggggaagggatcccccgaatactgggtatccgttgttaaaccgggtcgaatactt 303 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 304 tatgagatgggtggagtatcagaaactgtagccagagccgctat 347
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 357 bits (180), Expect = 3e-95 Identities = 303/344 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| || | ||| Sbjct: 81346 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatgtcttatcga 81287 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||| || ||||||||| || ||||| |||||||| ||||||||||| |||||||||| Sbjct: 81286 ggcagtcatatttgtttcggaagatacgctcttcaggcacttgaaccatcttggatcaca 81227 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| |||||||| || ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 81226 tctagacaaatagaagcggggcgaagggcaatgacacgatatgcacgtcgtggtggaaaa 81167 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 || ||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||| Sbjct: 81166 atctgggtacgtatatttccggacaaacccgttacaataagacccgcggaaacacgtatg 81107 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| ||||| ||||||||||| |||||| ||||||||||||| ||||| |||||| Sbjct: 81106 ggttcggggaagggatcccccgaatactgggtatccgttgttaaaccgggtcgaatactt 81047 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||| ||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 81046 tatgagatgggtggagtatcagaaactgtagccagagccgctat 81003 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| |||||||||||||||||||||||||||||||||| Sbjct: 80814 aaaatgatatgattcaacctcagacccttttaaatgtagc 80775
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 357 bits (180), Expect = 3e-95 Identities = 333/384 (86%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||| Sbjct: 86381 aaaagaaccagatttcgaaaacaacatagaggaagaatgaaaggaatatcttatcgaggt 86322 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| | Sbjct: 86321 aatcgtatttgtttcggtaaatatgctcttcaggcacttgaacccgcttggatcacatct 86262 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| ||||||||||| ||| ||||||| ||| || ||| || ||||||||||||||| Sbjct: 86261 agacaaatagaagcagggcgacgagcaatgacaagaaatgtgcgccgtggtggaaaaata 86202 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||| Sbjct: 86201 tgggtacgtatatttccagacaaaccagttacggtaagacctacggaaacacgtatgggt 86142 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||| || || || ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 86141 tcgggtaaaggatctcccgaatattgggtagctgtcgttaaaccaggtcgaatactttat 86082 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaa 421 |||||||| |||||| | |||| | |||| ||| ||||| || |||||||| ||| Sbjct: 86081 gaaatgggcggagtagcagaaaatatagccagaaaggctatttcaatagcggcgtccaaa 86022 Query: 422 atgcccatacgaagtcaatttatt 445 ||||| ||||||| |||||||||| Sbjct: 86021 atgcctatacgaactcaatttatt 85998 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 87398 atataattgctatgcttagt 87379 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| |||||||||||||||| | || ||| |||||||| Sbjct: 85863 aaaatgatatgattcaacctcaaagccatttgaatgtagc 85824
>gb|DQ069417.1| Nuphar advena ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 396 Score = 351 bits (177), Expect = 2e-93 Identities = 309/353 (87%) Strand = Plus / Plus Query: 50 atgcttagtcccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaa 109 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||| | Sbjct: 1 atgcttaaccccaaaagaaccaggtttcgtaaacaacatagaggaagaatgaagggagta 60 Query: 110 tccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgct 169 || | || ||||||| ||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 61 tcttatcgtggcaatcatatttgtttcggtagatatgcgcttcaggcacttgaacccgct 120 Query: 170 tggatcacggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgt 229 |||||||| | ||||| ||||||||||| ||| | ||||| |||||||||| |||||| Sbjct: 121 tggatcacatctagacaaatagaagcagggcgacgcgcaatggcacgatatgcccgtcgt 180 Query: 230 ggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaa 289 || ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 181 ggcggaaaaatatgggtacgtatattccccgacaaacccgttacactaagacccgcggaa 240 Query: 290 acacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggt 349 ||||||||||| ||||| ||||| || || |||||||||||| |||| |||||||| | | Sbjct: 241 acacgtatgggttcggggaagggatctcctgaatattgggtatccgtcgttaaaccggat 300 Query: 350 cgtatactttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 || ||||||||||||||||| |||||||| ||||| ||||| ||||| ||||| Sbjct: 301 cgaatactttatgaaatgggcggagtatcagaaaccgtagccagagccgctat 353
>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16 Length = 2064 Score = 349 bits (176), Expect = 7e-93 Identities = 302/344 (87%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||||||||||||||||||||| | || Sbjct: 1495 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaaaggaaaatcttataga 1554 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| |||| |||| || ||||| |||||||||||| ||||||||||||||||||| Sbjct: 1555 ggcaatcatattagtttcggaagatacgctcttcaagcagttgaacccgcttggatcaca 1614 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 || ||||| |||||||| || ||||||||||| | |||||||| ||||||||||||||| Sbjct: 1615 gctagacaaatagaagccgggcgaagagcaatcagccgatatgcgcgtcgtggtggaaaa 1674 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||| |||||||||| |||| |||||||||||||| | || ||||||||| Sbjct: 1675 atatgggtacgtttatttcccgataaacgcgttacactaagacctgccgagacacgtatg 1734 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| ||||| || |||||||| |||||| ||||||||||||||||||| |||||| Sbjct: 1735 ggttcggggaagggatctcccgaatactgggtatccgttgttaaaccaggtcgaatactt 1794 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctat 402 |||||||| ||||| ||||| |||||||| || ||| ||||||| Sbjct: 1795 tatgaaatagggggggtatccgaaactgtcgccagaacagctat 1838 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 2010 aaaatgatatgattcaacctcagacccttttgaatgtagc 2049
>ref|XM_481018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 793 Score = 347 bits (175), Expect = 3e-92 Identities = 223/239 (93%) Strand = Plus / Plus Query: 221 gcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaaga 280 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1 gcacgtcgtggtggaaaaatctgggtacgtatatttcccgacaaaccggttacaataaga 60 Query: 281 cccacggaaacacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttgtt 340 || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 ccgaccgaaacacgtatgggttcgggaaagggatcccccgaatattgggtagccgttgtt 120 Query: 341 aaaccaggtcgtatactttatgaaatggggggagtatctgaaactgtagctagagcagct 400 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||| Sbjct: 121 aaaccaggtcgaatactttatgaaatgggcggagtatccgaaactgtagctagagtagct 180 Query: 401 atctccatagcggccagtaaaatgcccatacgaagtcaatttattcgattagagatata 459 || |||||||| ||||| |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 181 atttccatagctgccagcaaaatgcccatacgaagtcaatttcttcggttagaaatata 239 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 337 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 338 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 397 Query: 616 tcga 619 |||| Sbjct: 398 tcga 401
>dbj|AK063122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-E09, full insert sequence Length = 792 Score = 347 bits (175), Expect = 3e-92 Identities = 223/239 (93%) Strand = Plus / Plus Query: 221 gcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaaga 280 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1 gcacgtcgtggtggaaaaatctggatacgtatatttcccgacaaaccggttacaataaga 60 Query: 281 cccacggaaacacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttgtt 340 || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 ccgaccgaaacacgtatgggttcgggaaagggatcccccgaatattgggtagccgttgtt 120 Query: 341 aaaccaggtcgtatactttatgaaatggggggagtatctgaaactgtagctagagcagct 400 ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 121 aaaccaggtcgaatactttatgaaatgggcggagtatccgaaactgtagctagagcagct 180 Query: 401 atctccatagcggccagtaaaatgcccatacgaagtcaatttattcgattagagatata 459 || |||||||| ||||| |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 181 atttccatagctgccagcaaaatgcccatacgaagtcaatttcttcggttagaaatata 239 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 336 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 337 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 396 Query: 616 tcga 619 |||| Sbjct: 397 tcga 400
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 345 bits (174), Expect = 1e-91 Identities = 282/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 84314 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 84255 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 84254 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 84195 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||||||||||||| Sbjct: 84194 tctagacaaatagaagcaggccgacgagcaatgacacgaaatgcacgtcgtggtggaaaa 84135 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 84134 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 84075 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 84074 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccgggtcgaatactt 84015 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 84014 tatgaaatgggtggagta 83997 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagc 600 ||||||||||||||||||| |||||||||||| Sbjct: 83789 atgattcaacctcagacccatttaaatgtagc 83758 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 85353 atataattgctatgcttagt 85334
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 345 bits (174), Expect = 1e-91 Identities = 282/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 83573 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 83514 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| |||||||||||||| |||||||| Sbjct: 83513 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacccgcctggatcaca 83454 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| ||||||| |||||||||||| Sbjct: 83453 tctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgacgtggtggaaaa 83394 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| ||||||||||||||| |||||||| | |||||||||||| Sbjct: 83393 atatgggtacgtatatttccagacaaaccggttacagtaagacccgcagaaacacgtatg 83334 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || ||||| |||||||||||||| ||||||||||||||||| || ||| Sbjct: 83333 ggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccaggtcgaatcctt 83274 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83273 tatgaaatgggtggagta 83256 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 83044 aaaatgatatgattcaacctcagacccttttgaatgtagc 83005 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84537 atataattgctatgcttagt 84518
>dbj|AB096925.1| Papaver somniferum chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 493 Score = 341 bits (172), Expect = 2e-90 Identities = 271/304 (89%) Strand = Plus / Plus Query: 99 tgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcac 158 |||| |||| ||||| ||||||||||| |||| |||| ||||||||||||||||| |||| Sbjct: 1 tgaagggaatatcctaccgaggcaatcatattagtttcggtagatatgctcttcaggcac 60 Query: 159 ttgaacccgcttggatcacggcgagacagatagaagcaggacgaagagcaataacacgat 218 |||||||||| |||||||| | ||||| ||||||||||| ||| ||||||| ||||||| Sbjct: 61 ttgaacccgcctggatcacatctagacaaatagaagcagggcgacgagcaatgacacgat 120 Query: 219 atgcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaa 278 |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 121 atgcgcgtcgtggtggaaaaatatgggtacgtatatttccagacaaacctgttacattaa 180 Query: 279 gacccacggaaacacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttg 338 |||| |||||||| |||||||||||||||||||| || ||||||||||||||| | || | Sbjct: 181 gacctacggaaacgcgtatgggctcgggaaagggatctcccgaatattgggtatctgtcg 240 Query: 339 ttaaaccaggtcgtatactttatgaaatggggggagtatctgaaactgtagctagagcag 398 ||||||| ||||| ||||||||||||||||| |||||||| |||| |||||| |||| || Sbjct: 241 ttaaaccgggtcgaatactttatgaaatgggtggagtatcagaaattgtagccagagaag 300 Query: 399 ctat 402 |||| Sbjct: 301 ctat 304
>dbj|AB096924.1| Papaver setigerum chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 493 Score = 341 bits (172), Expect = 2e-90 Identities = 271/304 (89%) Strand = Plus / Plus Query: 99 tgaaaggaaaatccttccgaggcaatcgtatttgttttggtagatatgctcttcaagcac 158 |||| |||| ||||| ||||||||||| |||| |||| ||||||||||||||||| |||| Sbjct: 1 tgaagggaatatcctaccgaggcaatcatattagtttcggtagatatgctcttcaggcac 60 Query: 159 ttgaacccgcttggatcacggcgagacagatagaagcaggacgaagagcaataacacgat 218 |||||||||| |||||||| | ||||| ||||||||||| ||| ||||||| ||||||| Sbjct: 61 ttgaacccgcctggatcacatctagacaaatagaagcagggcgacgagcaatgacacgat 120 Query: 219 atgcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaa 278 |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| Sbjct: 121 atgcgcgtcgtggtggaaaaatatgggtacgtatatttccagacaaacctgttacattaa 180 Query: 279 gacccacggaaacacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttg 338 |||| |||||||| |||||||||||||||||||| || ||||||||||||||| | || | Sbjct: 181 gacctacggaaacgcgtatgggctcgggaaagggatctcccgaatattgggtatctgtcg 240 Query: 339 ttaaaccaggtcgtatactttatgaaatggggggagtatctgaaactgtagctagagcag 398 ||||||| ||||| ||||||||||||||||| |||||||| |||| |||||| |||| || Sbjct: 241 ttaaaccgggtcgaatactttatgaaatgggtggagtatcagaaattgtagccagagaag 300 Query: 399 ctat 402 |||| Sbjct: 301 ctat 304
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 337 bits (170), Expect = 3e-89 Identities = 281/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||| Sbjct: 84066 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatctcatcga 84007 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 84006 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83947 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||||||||||||| Sbjct: 83946 tctagacaaatagaagcaggccgacgagcaatgacacgaaatgcacgtcgtggtggaaaa 83887 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83886 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 83827 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 83826 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccgggtcgaatactt 83767 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83766 tatgaaatgggtggagta 83749 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagc 600 ||||||||||||||||||| |||||||||||| Sbjct: 83546 atgattcaacctcagacccatttaaatgtagc 83515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 85106 atataattgctatgcttagt 85087
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 337 bits (170), Expect = 3e-89 Identities = 281/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||| Sbjct: 84064 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatctcatcga 84005 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 84004 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83945 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||||||||||||| Sbjct: 83944 tctagacaaatagaagcaggccgacgagcaatgacacgaaatgcacgtcgtggtggaaaa 83885 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83884 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 83825 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 83824 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccgggtcgaatactt 83765 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83764 tatgaaatgggtggagta 83747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagc 600 ||||||||||||||||||| |||||||||||| Sbjct: 83544 atgattcaacctcagacccatttaaatgtagc 83513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 85104 atataattgctatgcttagt 85085
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 337 bits (170), Expect = 3e-89 Identities = 281/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| ||| Sbjct: 83834 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatctcatcga 83775 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83774 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83715 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||||||||||||| Sbjct: 83714 tctagacaaatagaagcaggccgacgagcaatgacacgaaatgcacgtcgtggtggaaaa 83655 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83654 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 83595 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| ||||| |||||| Sbjct: 83594 ggttcaggaaaaggatcccctgaatattgggtagcagttgttaaaccgggtcgaatactt 83535 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83534 tatgaaatgggtggagta 83517 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagc 600 ||||||||||||||||||| |||||||||||| Sbjct: 83309 atgattcaacctcagacccatttaaatgtagc 83278 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84875 atataattgctatgcttagt 84856
>ref|XM_450630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 793 Score = 331 bits (167), Expect = 2e-87 Identities = 221/239 (92%) Strand = Plus / Plus Query: 221 gcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaaaccggttacactaaga 280 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1 gcacgtcgtggtggaaaaatctgggtacgtatatttcccgacaaaccggttacaataaga 60 Query: 281 cccacggaaacacgtatgggctcgggaaaggggtcccccgaatattgggtagccgttgtt 340 || || ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 ccgaccgaaacacatatgggttcgggaaagggatcccccgaatattgggtagccgttgtt 120 Query: 341 aaaccaggtcgtatactttatgaaatggggggagtatctgaaactgtagctagagcagct 400 ||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct: 121 aaaccaggtcgaatactttataaaatgggcggagtatccgaaactgtagctagagcagct 180 Query: 401 atctccatagcggccagtaaaatgcccatacgaagtcaatttattcgattagagatata 459 || |||||||| || || |||||||||||||||||||||||| |||| ||||| ||||| Sbjct: 181 atttccatagctgctagcaaaatgcccatacgaagtcaatttcttcggttagaaatata 239 Score = 206 bits (104), Expect = 6e-50 Identities = 119/124 (95%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 278 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataataaattg 337 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || | |||||| Sbjct: 338 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacactggagc 397 Query: 616 tcga 619 |||| Sbjct: 398 tcga 401
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 81520 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 81461 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||| Sbjct: 81460 ggtaatgctatttgttttggtaaatacgctcttcaggcacttgaacccgcttggatcacc 81401 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 81400 tctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgtcgcggtggaaaa 81341 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||| || ||||| |||||| |||||||| | |||||||||||| Sbjct: 81340 atatgggtccgtatatttccagataaaccagttacagtaagacccgcagaaacacgtatg 81281 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || || || || || ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 81280 ggttcaggtaaaggctctcccgaatattgggtagctgttgttaaaccaggtcgaatactt 81221 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 81220 tatgaaatgggtggagta 81203 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcaga 603 ||||| ||||||||||||||||||||| ||| ||||||||||| Sbjct: 81013 aaaatgatatgattcaacctcagacccatttgaatgtagcaga 80971
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 329 bits (166), Expect = 6e-87 Identities = 280/318 (88%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 81518 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 81459 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||| Sbjct: 81458 ggtaatgctatttgttttggtaaatacgctcttcaggcacttgaacccgcttggatcacc 81399 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 81398 tctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgtcgcggtggaaaa 81339 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||| || ||||| |||||| |||||||| | |||||||||||| Sbjct: 81338 atatgggtccgtatatttccagataaaccagttacagtaagacccgcagaaacacgtatg 81279 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || || || || || ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 81278 ggttcaggtaaaggctctcccgaatattgggtagctgttgttaaaccaggtcgaatactt 81219 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 81218 tatgaaatgggtggagta 81201 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcaga 603 ||||| ||||||||||||||||||||| ||| ||||||||||| Sbjct: 81011 aaaatgatatgattcaacctcagacccatttgaatgtagcaga 80969
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 327 bits (165), Expect = 2e-86 Identities = 306/353 (86%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||||||||| || ||||| |||||||||||||||||||||| ||| | |||||| Sbjct: 83868 aaaagaaccagattccgtaaacaccatagaggaagaatgaaaggaatatcttatcgaggc 83809 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||| ||||||| || || ||||| ||| |||| ||||||||||||||||||||||| | Sbjct: 83808 aatagtatttgcttcgggagatacgctattcaggcacttgaacccgcttggatcacatct 83749 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| || ||||| |||||||| ||||| |||||| ||||||| || |||||||||||| Sbjct: 83748 agacaaatcgaagccggacgaagggcaatgacacgaaatgcacgacgcggtggaaaaata 83689 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 83688 tgggtacgtatatttccagacaaacccgttacactaagacccacagaaacacgtatgggt 83629 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || |||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 83628 tcagggaaaggatcccccgaatattgggtagctgttgttaaaccaggtagaatactttat 83569 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 |||||| | |||||| | |||| | |||| ||| |||||| || |||||||| Sbjct: 83568 gaaatgagtggagtagccgaaaatatagccagaaaagctatttcaatagcggc 83516 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 560 caaaataatatgattcaacctcagacccttttaaatgtagcaga 603 ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 83338 caaaataatatgattcaacctcaaacccttttgaatgtagcaga 83295
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 327 bits (165), Expect = 2e-86 Identities = 306/353 (86%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||||||||| || ||||| |||||||||||||||||||||| ||| | |||||| Sbjct: 84096 aaaagaaccagattccgtaaacaccatagaggaagaatgaaaggaatatcttatcgaggc 84037 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||| ||||||| || || ||||| ||| |||| ||||||||||||||||||||||| | Sbjct: 84036 aatagtatttgcttcgggagatacgctattcaggcacttgaacccgcttggatcacatct 83977 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| || ||||| |||||||| ||||| |||||| ||||||| || |||||||||||| Sbjct: 83976 agacaaatcgaagccggacgaagggcaatgacacgaaatgcacgacgcggtggaaaaata 83917 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 83916 tgggtacgtatatttccagacaaacccgttacactaagacccacagaaacacgtatgggt 83857 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || |||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 83856 tcagggaaaggatcccccgaatattgggtagctgttgttaaaccaggtagaatactttat 83797 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 |||||| | |||||| | |||| | |||| ||| |||||| || |||||||| Sbjct: 83796 gaaatgagtggagtagccgaaaatatagccagaaaagctatttcaatagcggc 83744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 560 caaaataatatgattcaacctcagacccttttaaatgtagcaga 603 ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 83566 caaaataatatgattcaacctcaaacccttttgaatgtagcaga 83523
>dbj|AB096923.1| Papaver rhoeas chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 493 Score = 325 bits (164), Expect = 1e-85 Identities = 257/288 (89%) Strand = Plus / Plus Query: 115 ccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat 174 ||||||||||| |||| |||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 17 ccgaggcaatcatattagtttcggtagatatgctcttcaggcacttgaacccgcctggat 76 Query: 175 cacggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgg 234 ||| | ||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 77 cacatctagacaaatagaagcagggcgacgagcaatgacacgatatgcgcgtcgtggtgg 136 Query: 235 aaaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacg 294 |||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| || Sbjct: 137 aaaaatatgggtacgtatatttccagacaaacctgttacattaagacctacggaaacgcg 196 Query: 295 tatgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 |||||||||||| ||||| || ||||||||||||||| | || |||||||| ||||| || Sbjct: 197 tatgggctcggggaagggatctcccgaatattgggtatctgtcgttaaaccgggtcgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||||||||||||| |||||||| |||| |||||| |||| |||||| Sbjct: 257 actttatgaaatgggtggagtatcagaaattgtagccagagaagctat 304
>dbj|AB096922.1| Papaver pseudo-orientale chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 494 Score = 325 bits (164), Expect = 1e-85 Identities = 257/288 (89%) Strand = Plus / Plus Query: 115 ccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat 174 ||||||||||| |||| |||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 17 ccgaggcaatcatattagtttcggtagatatgctcttcaggcacttgaacccgcctggat 76 Query: 175 cacggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgg 234 ||| | ||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 77 cacatctagacaaatagaagcagggcgacgagcaatgacacgatatgcgcgtcgtggtgg 136 Query: 235 aaaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacg 294 |||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| || Sbjct: 137 aaaaatatgggtacgtatatttccagacaaacctgttacattaagacctacggaaacgcg 196 Query: 295 tatgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 |||||||||||| ||||| || ||||||||||||||| | || |||||||| ||||| || Sbjct: 197 tatgggctcggggaagggatctcccgaatattgggtatctgtcgttaaaccgggtcgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||||||||||||| |||||||| |||| |||||| |||| |||||| Sbjct: 257 actttatgaaatgggtggagtatcagaaattgtagccagagaagctat 304
>dbj|AB096921.1| Papaver orientale chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 494 Score = 325 bits (164), Expect = 1e-85 Identities = 257/288 (89%) Strand = Plus / Plus Query: 115 ccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat 174 ||||||||||| |||| |||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 17 ccgaggcaatcatattagtttcggtagatatgctcttcaggcacttgaacccgcctggat 76 Query: 175 cacggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgg 234 ||| | ||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 77 cacatctagacaaatagaagcagggcgacgagcaatgacacgatatgcgcgtcgtggtgg 136 Query: 235 aaaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacg 294 |||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| || Sbjct: 137 aaaaatatgggtacgtatatttccagacaaacctgttacattaagacctacggaaacgcg 196 Query: 295 tatgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 |||||||||||| ||||| || ||||||||||||||| | || |||||||| ||||| || Sbjct: 197 tatgggctcggggaagggatctcccgaatattgggtatctgtcgttaaaccgggtcgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||||||||||||| |||||||| |||| |||||| |||| |||||| Sbjct: 257 actttatgaaatgggtggagtatcagaaattgtagccagagaagctat 304
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 321 bits (162), Expect = 2e-84 Identities = 279/318 (87%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||| |||||||| |||| ||| | ||| Sbjct: 83245 cccaaaagaaccagattccgtaaacaacatagaggcagaatgaagggaatatcttctcga 83186 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||||||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83185 ggtaatcgtatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83126 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | |||| ||||||||||| ||| | ||||| |||||| |||||||||||||||||||| Sbjct: 83125 tctcgacaaatagaagcaggccgacgggcaatgacacgaaatgcacgtcgtggtggaaaa 83066 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83065 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 83006 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 83005 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccggggcgaatactt 82946 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 82945 tatgaaatgggtggagta 82928 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||||||||||||||||| |||||||||||| || ||||| || |||||| Sbjct: 82725 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcga 82675 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84279 atataattgctatgcttagt 84260
>dbj|AB096920.1| Papaver bracteatum chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 494 Score = 317 bits (160), Expect = 2e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 115 ccgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat 174 ||||||||||| |||| |||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 17 ccgaggcaatcatattagtttcggtagatatgctcttcaggcacttgaacccgcctggat 76 Query: 175 cacggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgg 234 ||| | ||||| ||||||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 77 cacatctagacaaatagaagcagggcgacgagcaatgacacgatatgcgcgtcgtggtgg 136 Query: 235 aaaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacg 294 |||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||| || Sbjct: 137 aaaaatatgggtacgtatatttccagacaaacctgttacattaagacctacggaaactcg 196 Query: 295 tatgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 |||||||||||| ||||| || || |||||||||||| | || |||||||| ||||| || Sbjct: 197 tatgggctcggggaagggatctcctgaatattgggtatctgtcgttaaaccgggtcgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 ||||||||||||||| |||||||| |||| |||||| |||| |||||| Sbjct: 257 actttatgaaatgggtggagtatcagaaattgtagccagagaagctat 304
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 313 bits (158), Expect = 4e-82 Identities = 278/318 (87%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 80972 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaagggaatatcttatcga 80913 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||| Sbjct: 80912 ggtaatactatttgttttggtaaatacgctcttcaggcacttgaacccgcttggatcaca 80853 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| ||||||| |||||| |||||||||| ||||||||| Sbjct: 80852 tctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgtcgcggtggaaaa 80793 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||| ||||||||||| || ||||| |||||| |||| ||| | |||||||||||| Sbjct: 80792 atatgggtccgtatatttccagataaaccagttacagtaaggcccgcagaaacacgtatg 80733 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || || || || || ||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 80732 ggttcaggtaaaggctctcccgaatattgggtagctgttgttaaaccaggtcgaatcctt 80673 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 80672 tatgaaatgggtggagta 80655 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcaga 603 ||||| ||||||||||||||||||||| ||| ||||||||||| Sbjct: 80459 aaaatgatatgattcaacctcagacccatttgaatgtagcaga 80417
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 313 bits (158), Expect = 4e-82 Identities = 278/318 (87%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||| |||||||| |||| ||| | ||| Sbjct: 83199 cccaaaagaaccagattccgtaaacaacatagaggcagaatgaagggaatatcttctcga 83140 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83139 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83080 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | |||| ||||||||||| ||| | ||||| |||||| |||||||||||||||||||| Sbjct: 83079 tctcgacaaatagaagcaggccgacgggcaatgacacgaaatgcacgtcgtggtggaaaa 83020 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83019 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 82960 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 82959 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccggggcgaatactt 82900 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 82899 tatgaaatgggtggagta 82882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||||||||||||||||| |||||||||||| || ||||| || |||||| Sbjct: 82674 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcga 82624 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84233 atataattgctatgcttagt 84214
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 313 bits (158), Expect = 4e-82 Identities = 278/318 (87%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||| |||||||| |||| ||| | ||| Sbjct: 83211 cccaaaagaaccagattccgtaaacaacatagaggcagaatgaagggaatatcttctcga 83152 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83151 ggtaatcatatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83092 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | |||| ||||||||||| ||| | ||||| |||||| |||||||||||||||||||| Sbjct: 83091 tctcgacaaatagaagcaggccgacgggcaatgacacgaaatgcacgtcgtggtggaaaa 83032 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||| Sbjct: 83031 atatgggtacgtatatttccagacaaaccagttacactaagacccgcagaaacacgtatg 82972 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 82971 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccggggcgaatactt 82912 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 82911 tatgaaatgggtggagta 82894 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||||||||||||||||| |||||||||||| || ||||| || |||||| Sbjct: 82686 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcga 82636 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84245 atataattgctatgcttagt 84226
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 311 bits (157), Expect = 1e-81 Identities = 268/305 (87%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| ||||| || ||||||||||||||||||||||| |||| ||| | ||||| Sbjct: 80132 aaaagaactagattccgtaaacaacatagaggaagaatgaagggaatatcttatcgaggg 80073 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||| | Sbjct: 80072 aatcgtatttgtttcggaagatatgctcttcaggcacttgaacctgcttggatcacgtct 80013 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 || || ||||||||||| || ||||||| |||||| |||| ||||| |||||||||||| Sbjct: 80012 aggcaaatagaagcagggcggcgagcaatgacacgaaatgcgcgtcgcggtggaaaaata 79953 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| |||||| |||||||| ||||||| |||||||| Sbjct: 79952 tgggtacgtatatttccagacaaaccagttacagtaagacccgcggaaacccgtatgggt 79893 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||| || || || ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 79892 tcggggaaaggatctcccgaatattgggtagctgttgtcaaaccaggtcgaatactttat 79833 Query: 362 gaaat 366 ||||| Sbjct: 79832 gaaat 79828 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 566 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||| ||| |||||||||||||| || || |||||| Sbjct: 79607 aatatgattcaacctcagacccatttgaatgtagcagacaacagcggggctcga 79554
>dbj|AB077366.1| Iris bungei plastid DNA, intron region Length = 576 Score = 307 bits (155), Expect = 2e-80 Identities = 255/287 (88%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 |||||||||| |||||| || || ||||| || ||||| ||||||||||||||||||||| Sbjct: 45 cgaggcaatcatatttgcttcggcagatacgcccttcaggcacttgaacccgcttggatc 104 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || || ||||| ||||||||||| ||||||||||| || ||||| || |||||||||||| Sbjct: 105 acagctagacaaatagaagcagggcgaagagcaatgacgcgatacgc-cgtcgtggtgga 163 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 164 aaaatatgggtacgcatatttcccgacaaacccattacagtaagacccacggaaacacgc 223 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| || || ||||| ||||| |||||||||||| ||||||||||||| || || ||| Sbjct: 224 atgggttcagggaagggatcccctgaatattgggtatccgttgttaaaccgggccgaata 283 Query: 356 ctttatgaaatggggggagtatctgaaactgtagctagagcagctat 402 |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 284 ctttatgaaatgggcggagtatcagaaactgtagccagagcagctat 330 Score = 93.7 bits (47), Expect = 7e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 534 tttgcattgaaataacaaattgaaatcaaaataatatgattcaacctcagacccttttaa 593 ||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||| Sbjct: 506 tttgcattgaaataacagattcaaataaaaatgatatgattcaacctcagacccttttaa 565 Query: 594 atg 596 ||| Sbjct: 566 atg 568 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaat 99 |||||||| |||||||||||||||||||| Sbjct: 9 agatttcgtaaacaacatagaggaagaat 37
>dbj|AB077335.1| Allium altaicum plastid DNA, intron region Length = 551 Score = 307 bits (155), Expect = 2e-80 Identities = 277/315 (87%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 86 catagaggaagaatgaaaggaaaatccttccgaggcaatcgtatttgtttt-ggtagata 144 ||||| |||||||||||||||| ||| | ||| || |||| |||||| ||| || ||||| Sbjct: 518 catagcggaagaatgaaaggaatatcttgccggggtaatcatatttgctttcggcagata 459 Query: 145 tgctcttcaagcacttgaacccgcttggatcacggcgagacagatagaagcaggacgaag 204 ||||||||| |||||||||||||||||||| || || ||||| ||||| ||||||||||| Sbjct: 458 tgctcttcaggcacttgaacccgcttggattaccgctagacaaataga-gcaggacgaag 400 Query: 205 agcaataacacgatatgcacgtcgtggtggaaaaatatgggtacgtatatttcccgacaa 264 |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| || Sbjct: 399 agcaatgacacgatatgcacgtcgtggtggaaaaatatgggtacgtgtttttcccgataa 340 Query: 265 accggttacactaagacccacggaaacacgtatgggctcgggaaaggggtcccccgaata 324 ||| ||||| |||| ||| | |||||||||||||| ||||||||||| || |||||||| Sbjct: 339 acctattacagtaaggcccgcagaaacacgtatggggtcgggaaagggatctcccgaata 280 Query: 325 ttgggtagccgttgttaaaccaggtcgtatactttatgaaatggggggagtatctgaaac 384 ||||||| | ||||||||||| ||||| |||||||| |||||||| ||||| || ||||| Sbjct: 279 ttgggtatctgttgttaaacccggtcgaatactttacgaaatgggcggagtctcagaaac 220 Query: 385 tgtagctagagcagc 399 |||||| |||||||| Sbjct: 219 tgtagccagagcagc 205 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 568 tatgattcaacctcagacccttttaaatg 596 ||||||||||||||||||||||||||||| Sbjct: 515 tatgattcaacctcagacccttttaaatg 543 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaat 99 |||||||| |||||||||||||||||||| Sbjct: 9 agatttcgtaaacaacatagaggaagaat 37
>gb|DQ069418.1| Ranunculus macranthus ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 405 Score = 303 bits (153), Expect = 4e-79 Identities = 303/353 (85%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||| ||| | ||| Sbjct: 10 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaatatcttatcga 69 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||| Sbjct: 70 ggcaatcgaatttgtttcgggggatatgcccttcaggcacttgaacccgcttggatcaca 129 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||| || || ||| |||| || ||||||||||| || |||||||||||| Sbjct: 130 tctagacaaatagaggcggggcgacgagctatgacacgatatgcgcgccgtggtggaaaa 189 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| |||||| |||| || | |||||||||||| Sbjct: 190 atatgggtacgtatatttccagacaaacccgttacagtaaggcctgccgaaacacgtatg 249 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || || || || || ||||||| ||||||| ||| |||||||| ||||| |||||| Sbjct: 250 ggttccgggaaaggatctcccgaattttgggtattcgtcgttaaacctggtcgaatactt 309 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagc 411 ||||||||||| |||||||| |||| |||||| |||| |||||| || ||||| Sbjct: 310 tatgaaatgggtggagtatcagaaattgtagccagagaagctatttctatagc 362
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 303 bits (153), Expect = 4e-79 Identities = 267/305 (87%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| ||||| || ||||||||||||||||||||||| |||| ||| | ||||| Sbjct: 2801 aaaagaactagattccgtaaacaacatagaggaagaatgaagggaatatcttatcgaggg 2860 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||| | Sbjct: 2861 aatcgtatttgtttcggaagatatgctcttcaggcacttgaacctgcttggatcacgtct 2920 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 || || ||||||||||| || ||||||| |||||| ||| ||||| |||||||||||| Sbjct: 2921 aggcaaatagaagcagggcggcgagcaatgacacgaaatggccgtcgcggtggaaaaata 2980 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| |||||| |||||||| ||||||| |||||||| Sbjct: 2981 tgggtacgtatatttccagacaaaccagttacagtaagacccgcggaaacccgtatgggt 3040 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||| || || || ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 3041 tcggggaaaggatctcccgaatattgggtagctgttgtcaaaccaggtcgaatactttat 3100 Query: 362 gaaat 366 ||||| Sbjct: 3101 gaaat 3105 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 566 aatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 |||||||||||||||||||||| ||| |||||||||||||| || || |||||| Sbjct: 3326 aatatgattcaacctcagacccatttgaatgtagcagacaacagcggggctcga 3379
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 297 bits (150), Expect = 2e-77 Identities = 276/318 (86%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||| |||||||| |||| ||| | ||| Sbjct: 83342 cccaaaagaaccagattccgtaaacaacatagaggcagaatgaagggaatatcttatcga 83283 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||||||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83282 ggtaatcgtatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83223 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | |||| ||||||||||| ||| | ||||| |||||| |||||||||||||||||||| Sbjct: 83222 tctcgacaaatagaagcaggccgacgggcaatgacacgaaatgcacgtcgtggtggaaaa 83163 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| |||||| ||||||| | ||||| |||||| Sbjct: 83162 atatgggtacgtatatttccagacaaacctgttacattaagaccggcagaaacccgtatg 83103 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 83102 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccggggcgaatactt 83043 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83042 tatgaaatgggtggagta 83025 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||||||||||||||||| |||||||||||| || ||||| || |||||| Sbjct: 82821 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcga 82771 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84380 atataattgctatgcttagt 84361
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 297 bits (150), Expect = 2e-77 Identities = 276/318 (86%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||| |||||||| |||| ||| | ||| Sbjct: 83339 cccaaaagaaccagattccgtaaacaacatagaggcagaatgaagggaatatcttatcga 83280 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||||||||| ||| |||| |||||||||||| ||||||||||| |||||||| || Sbjct: 83279 ggtaatcgtatttctttcggtaaatatgctcttcaggcacttgaacctgcttggattaca 83220 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | |||| ||||||||||| ||| | ||||| |||||| |||||||||||||||||||| Sbjct: 83219 tctcgacaaatagaagcaggccgacgggcaatgacacgaaatgcacgtcgtggtggaaaa 83160 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| |||||| ||||||| | ||||| |||||| Sbjct: 83159 atatgggtacgtatatttccagacaaacctgttacattaagaccggcagaaacccgtatg 83100 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || || ||||| || ||||| |||||||||||||| ||||||||||| || || |||||| Sbjct: 83099 ggttcaggaaaaggatcccctgaatattgggtagctgttgttaaaccggggcgaatactt 83040 Query: 359 tatgaaatggggggagta 376 ||||||||||| |||||| Sbjct: 83039 tatgaaatgggtggagta 83022 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||||||||||||||||| |||||||||||| || ||||| || |||||| Sbjct: 82818 atgattcaacctcagacccatttaaatgtagcggataatagcggggctcga 82768 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 84377 atataattgctatgcttagt 84358
>dbj|AB199893.1| Angelica acutiloba var. iwatensis chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, and rpl16-rpl14 spacer Length = 463 Score = 287 bits (145), Expect = 2e-74 Identities = 232/261 (88%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||| ||| |||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 18 cgaggtaatcatatttctttcggtaaatacgctcttcaggcacttgaacctgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 ||| | ||||| ||||||||||| ||| ||||||| |||||| ||||||| || |||||| Sbjct: 78 acgtctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgccgcggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||| Sbjct: 138 aaaatatgggtacgtatatttccagacaaaccggttacagtaagacccgcagaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccaggtcgaata 257 Query: 356 ctttatgaaatggggggagta 376 |||||||||||||| |||||| Sbjct: 258 ctttatgaaatgggtggagta 278
>dbj|AB199892.1| Angelica acutiloba var. sugiyamae chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, and rpl16-rpl14 spacer Length = 463 Score = 287 bits (145), Expect = 2e-74 Identities = 232/261 (88%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||| ||| |||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 18 cgaggtaatcatatttctttcggtaaatacgctcttcaggcacttgaacctgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 ||| | ||||| ||||||||||| ||| ||||||| |||||| ||||||| || |||||| Sbjct: 78 acgtctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgccgcggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||| Sbjct: 138 aaaatatgggtacgtatatttccagacaaaccggttacagtaagacccgcagaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccaggtcgaata 257 Query: 356 ctttatgaaatggggggagta 376 |||||||||||||| |||||| Sbjct: 258 ctttatgaaatgggtggagta 278
>dbj|AB199891.1| Angelica acutiloba chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, and rpl16-rpl14 spacer Length = 463 Score = 287 bits (145), Expect = 2e-74 Identities = 232/261 (88%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||| ||| |||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 18 cgaggtaatcatatttctttcggtaaatacgctcttcaggcacttgaacctgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 ||| | ||||| ||||||||||| ||| ||||||| |||||| ||||||| || |||||| Sbjct: 78 acgtctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgccgcggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||| Sbjct: 138 aaaatatgggtacgtatatttccagacaaaccggttacagtaagacccgcagaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccaggtcgaata 257 Query: 356 ctttatgaaatggggggagta 376 |||||||||||||| |||||| Sbjct: 258 ctttatgaaatgggtggagta 278
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 283 bits (143), Expect = 3e-73 Identities = 290/339 (85%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||| ||| ||| | ||| ||| Sbjct: 59529 aaaagaacaaaatttcgtaaacaacataggggaagaatgaagggagtatcttaccgcggc 59470 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 59469 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 59410 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 59409 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 59350 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 59349 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 59290 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || || ||||||||||||||| | || | ||||||||||| ||||||||| Sbjct: 59289 tccgggaaaggatctcccgaatattgggtatctgtcatcaaaccaggtcgaatactttat 59230 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagct 400 |||||||| |||||||| ||||| || |||||||||||| Sbjct: 59229 gaaatgggcggagtatccgaaaccgtcgctagagcagct 59191
>dbj|AB077334.1| Zygophyllum pterocarpum plastid DNA, intron region Length = 553 Score = 281 bits (142), Expect = 1e-72 Identities = 265/306 (86%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 130 |||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||| Sbjct: 9 agatttcgtaaacaacatagaggaagaatgaaaggaagatcttatcgaggcaatcgtatt 68 Query: 131 tgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagacagata 190 ||||||||||||||||||||||| |||||||||||||||||||| || | ||||| ||| Sbjct: 69 tgttttggtagatatgctcttcaggcacttgaacccgcttggataacatctagacaaata 128 Query: 191 gaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggtacgt 250 |||||||| ||| ||||||| |||||| ||| ||| || |||||||||||||||||||| Sbjct: 129 gaagcaggtcgacgagcaatgacacgaaatgtacgccgcggtggaaaaatatgggtacgc 188 Query: 251 atatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcgggaaag 310 |||||||| |||||||| || ||| |||||| | |||||||||||||| |||||||| Sbjct: 189 atatttccagacaaaccagtcacagcaagacctgcagaaacacgtatgggttcgggaaaa 248 Query: 311 gggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatgggg 370 || || || ||||||||||| | || |||||||| ||| | ||||||||||||||| | Sbjct: 249 ggatctccagaatattgggtctctgtggttaaacctggtaggatactttatgaaatgagt 308 Query: 371 ggagta 376 |||||| Sbjct: 309 ggagta 314 Score = 44.1 bits (22), Expect = 0.54 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 567 atatgattcaacctcagacccttttaaatg 596 ||||||||||||||||| |||||||||||| Sbjct: 517 atatgattcaacctcag-cccttttaaatg 545
>dbj|AB077337.1| Saussurea involucrata plastid DNA, intron region Length = 541 Score = 276 bits (139), Expect = 8e-71 Identities = 244/279 (87%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| |||||||||||||| ||| |||||||| ||||||||||||||||||||| Sbjct: 45 cgaggtaatcatatttgttttggtaaatacgctcttcaggcacttgaacccgcttggatc 104 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| ||||||||||| ||| ||||||| |||||| ||||||||||||||||| Sbjct: 105 acatctagacaaatagaagcaggtcgacgagcaatgacacgaaatgcacgtcgtggtgga 164 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| || |||||||| || ||||| |||||| |||||||| | ||||||||| Sbjct: 165 aaaatatgggtccgcatatttccagataaaccagttacagtaagacccgcagaaacacgt 224 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| || || || || || ||||||||||||||||| ||||||||||||||||| || Sbjct: 225 atgggttcaggtaaaggctctcccgaatattgggtagctgttgttaaaccaggtcgaatc 284 Query: 356 ctttatgaaatggggggagtatctgaaactgtagctaga 394 |||||||||||||| |||||| | |||| | |||||||| Sbjct: 285 ctttatgaaatgggtggagtaacagaaaatatagctaga 323 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatg 596 ||||| |||||||||||||||||||||||||||||| Sbjct: 498 aaaatcatatgattcaacctcagacccttttaaatg 533 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaat 99 |||||||| |||||||||||||||||||| Sbjct: 9 agatttcgtaaacaacatagaggaagaat 37
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 272 bits (137), Expect = 1e-69 Identities = 299/353 (84%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||||||||||||||| ||||||||| |||||||| | ||||||| ||| | || || Sbjct: 81584 aaaagaaccagatttcgtaaacaacatcgaggaagactaaaaggaatatcttctcgtggg 81525 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| | Sbjct: 81524 aatcgtatttgttttggcagatatgctcttcaaacacttgaacccgcttggatcacatct 81465 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| ||||||||||| ||| | ||||| |||||| ||| ||| |||||||||||||| Sbjct: 81464 agacaaatagaagcagggcgacgcgcaatgacacgaaatgtacgacgtggtggaaaaatt 81405 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| |||||||| |||||| ||||||| ||||||| |||||||| Sbjct: 81404 tgggtacgtatatttccagacaaaccagttacagtaagacctgcggaaacgcgtatgggt 81345 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || ||||| || ||||||||||| || |||||||||||| || |||||| Sbjct: 81344 tctgggaaaggatcccctgagtattgggtagctgtggttaaaccaggtaaaatcctttat 81285 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 |||||||| || ||| | |||| | |||| ||| |||||| || |||||||| Sbjct: 81284 gaaatgggtggtgtacccgaaaatatagcaagaaaagctatttcaatagcggc 81232 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaa 606 ||||| ||||||||||||| || ||| ||| |||||||||||||| Sbjct: 81072 aaaatgatatgattcaaccacaaacctatttgaatgtagcagacaa 81027 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 82663 atataattgctatgcttagt 82644
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 268 bits (135), Expect = 2e-68 Identities = 288/339 (84%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 61439 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 61380 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 61379 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 61320 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || | || ||||| |||||||| ||||||||| Sbjct: 61319 gggcagatagaagccggacgaagaacgattaatcgttatgcccgtcgtggcggaaaaata 61260 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 61259 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 61200 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || || ||||||||||||||| | || | | ||||||||| ||||||||| Sbjct: 61199 tccgggaaaggatctcccgaatattgggtatctgtcatcagaccaggtcgaatactttat 61140 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagct 400 |||||||| |||||||| ||||| || |||||||||||| Sbjct: 61139 gaaatgggcggagtatccgaaaccgtcgctagagcagct 61101
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 266 bits (134), Expect = 8e-68 Identities = 272/318 (85%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||| | ||||||| ||||||||||||||||||||||| || | ||| | ||| Sbjct: 85986 cccaaaagaaaccgatttcgtaaacaacatagaggaagaatgaaggggatatcttatcga 85927 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 85926 ggtaatcggatttgtttcggtagatatgctcttcaagcacttgaacccgcttggattaca 85867 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| |||||||| || || | ||||| |||||| ||| ||| |||||||||||| Sbjct: 85866 tctagacaaatagaagcggggcgccgcgcaatgacacgaaatgtacgccgtggtggaaaa 85807 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||| Sbjct: 85806 atatgggtacgtatatttccagacaaacccgttacggtaagacctacagaaacacgtatg 85747 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || || ||||| ||||||||||| || |||||||| || | |||||| Sbjct: 85746 ggttcggggaaaggatctcccgagtattgggtagctgtcgttaaaccgggcagaatactt 85687 Query: 359 tatgaaatggggggagta 376 ||||||||| | |||||| Sbjct: 85686 tatgaaatgagcggagta 85669 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 569 atgattcaacctcagacccttttaaatgtagcaga 603 ||||||||||||||||||| ||| ||||||||||| Sbjct: 85455 atgattcaacctcagacccatttgaatgtagcaga 85421 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 87146 atataattgctatgcttagt 87127
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 266 bits (134), Expect = 8e-68 Identities = 146/150 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1075 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1134 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1194 Query: 179 gcgagacagatagaagcaggacgaagagca 208 ||||||||||||||||||||||||||||| Sbjct: 1195 tcgagacagatagaagcaggacgaagagca 1224
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 264 bits (133), Expect = 3e-67 Identities = 289/341 (84%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||||||||| || ||||||||||||||||||||||| ||| ||| | || ||| Sbjct: 88199 aaaagaaccagattccgtaaacaacatagaggaagaatgaagggagtatcttctcggggc 88140 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||| ||||||||| |||||||| |||||||| ||||||||||| ||||||||||| | Sbjct: 88139 aatcatatttgtttcggtagatacgctcttcaggcacttgaacctgcttggatcacatct 88080 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| |||||||| || || ||||||| |||||||| || ||||| || ||||||||| Sbjct: 88079 agacaaatagaagcgggtagacgagcaatgacacgatacgctcgtcgcggcggaaaaata 88020 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||| |||| ||||||||||| ||||| |||||||| |||||||||||||||| Sbjct: 88019 tgggtacgcgtattccccgacaaacccattacagtaagacccgcggaaacacgtatgggt 87960 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||||||||| || || ||||||||||| | || ||||||| ||||| |||||| || Sbjct: 87959 tcgggaaagggatctcctgaatattgggtttctgtaattaaaccgggtcgaatacttcat 87900 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctat 402 |||||||| ||||| | |||||||| || ||||||||||| Sbjct: 87899 gaaatgggcggagtgccagaaactgtcgccagagcagctat 87859
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 264 bits (133), Expect = 3e-67 Identities = 145/149 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1076 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1135 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1195 Query: 179 gcgagacagatagaagcaggacgaagagc 207 |||||||||||||||||||||||||||| Sbjct: 1196 tcgagacagatagaagcaggacgaagagc 1224
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 264 bits (133), Expect = 3e-67 Identities = 145/149 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1080 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1139 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1199 Query: 179 gcgagacagatagaagcaggacgaagagc 207 |||||||||||||||||||||||||||| Sbjct: 1200 tcgagacagatagaagcaggacgaagagc 1228
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 264 bits (133), Expect = 3e-67 Identities = 145/149 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1022 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1081 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1141 Query: 179 gcgagacagatagaagcaggacgaagagc 207 |||||||||||||||||||||||||||| Sbjct: 1142 tcgagacagatagaagcaggacgaagagc 1170
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 258 bits (130), Expect = 2e-65 Identities = 145/150 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||| |||||||||| |||||||||| |||| Sbjct: 1078 cccaaaagaaccagatttcgtaaacaacatagaagaagaatgaagggaaaatcctgccga 1137 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1197 Query: 179 gcgagacagatagaagcaggacgaagagca 208 ||||||||||||||||||||||||||||| Sbjct: 1198 tcgagacagatagaagcaggacgaagagca 1227
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 258 bits (130), Expect = 2e-65 Identities = 145/150 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1025 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1084 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 ggcagtcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1144 Query: 179 gcgagacagatagaagcaggacgaagagca 208 ||||||||||||||||||||||||||||| Sbjct: 1145 tcgagacagatagaagcaggacgaagagca 1174
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 254 bits (128), Expect = 3e-64 Identities = 134/136 (98%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1007 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatcctgccga 1066 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1126 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1127 gcgagacagatagaag 1142
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 254 bits (128), Expect = 3e-64 Identities = 263/308 (85%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||||| |||||| ||||||||| |||||||| | ||||||| ||||| || || Sbjct: 80667 aaaagaaccaaatttcgtaaacaacatcgaggaagactaaaaggaatatcctctcgtggg 80608 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| || | Sbjct: 80607 aatcgtatttgttttggcagatatgctcttcaaacacttgaacccgcttggattacatct 80548 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| ||||||||||| ||| ||||||| |||||| || ||| |||||||||||||| Sbjct: 80547 agacaaatagaagcagggcgacgagcaatgacacgaaatatacgacgtggtggaaaaatt 80488 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 ||||||||||||||||| ||||| || |||||| |||||||| ||||||| |||||||| Sbjct: 80487 tgggtacgtatatttccagacaagccagttacagtaagacccgcggaaacgcgtatgggt 80428 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 || || || || ||||| || || |||||||| || |||||||||||| || |||||| Sbjct: 80427 tctgggaaaggatccccagagtactgggtagctgtggttaaaccaggtaaaatcctttat 80368 Query: 362 gaaatggg 369 |||||||| Sbjct: 80367 gaaatggg 80360 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 566 aatatgattcaacctcagacccttttaaatgtagcagacaa 606 |||||||||||||| || ||| ||| |||||||||||||| Sbjct: 80158 aatatgattcaaccacaaacctatttgaatgtagcagacaa 80118 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atataattgctatgcttagt 58 |||||||||||||||||||| Sbjct: 81758 atataattgctatgcttagt 81739
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 254 bits (128), Expect = 3e-64 Identities = 134/136 (98%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1052 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatcctgccga 1111 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1112 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacctgcttggatcacg 1171 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1172 gcgagacagatagaag 1187
>dbj|AB077439.1| Sophora alopecuroides plastid DNA, intron region Length = 569 Score = 254 bits (128), Expect = 3e-64 Identities = 314/376 (83%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 130 |||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| Sbjct: 9 agatttcgtaaacaacatagaggaagaatgaaaggaaaagcctatcgaggtaatcgtatt 68 Query: 131 tgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagacagata 190 | || || | |||||||||||| ||||||||||||||||||||||| | ||||| ||| Sbjct: 69 tccttcggaaaatatgctcttcaggcacttgaacccgcttggatcacatctagacaaata 128 Query: 191 gaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggtacgt 250 |||||||| || | ||||| ||||| ||| ||||| |||||| ||||||||||||| Sbjct: 129 gaagcagggcgccgggcaatgtcacgaaatgtccgtcggggtggacaaatatgggtacgc 188 Query: 251 atatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcgggaaag 310 |||||||| |||||||| |||||| ||||||| || ||||| |||||||| ||||||||| Sbjct: 189 atatttccagacaaacctgttacagtaagacctaccgaaacgcgtatgggttcgggaaag 248 Query: 311 gggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatgggg 370 || || ||||||||||||||||| || |||||||| || ||||||||||||||| Sbjct: 249 ggatctcccgaatattgggtagctgtcgttaaacccggcaaaatactttatgaaatgaat 308 Query: 371 ggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccata 430 || || || |||||| |||||||| |||||| || ||||| || |||||||| ||| Sbjct: 309 ggggtctcagaaactatagctagaaaagctatgtcaatagcagcatcgaaaatgcctata 368 Query: 431 cgaagtcaatttattc 446 |||| |||||| |||| Sbjct: 369 cgaactcaattcattc 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatg 596 |||||||||||||||||||||||||||||||||||| Sbjct: 526 aaaataatatgattcaacctcagacccttttaaatg 561
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 252 bits (127), Expect = 1e-63 Identities = 144/150 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||| |||||||||| |||||||||| |||| Sbjct: 1077 cccaaaagaaccagatttcgtaaacaacatagaagaagaatgaagggaaaatcctgccga 1136 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1196 Query: 179 gcgagacagatagaagcaggacgaagagca 208 |||||||||||||||||||| |||||||| Sbjct: 1197 tcgagacagatagaagcaggangaagagca 1226
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 252 bits (127), Expect = 1e-63 Identities = 262/307 (85%) Strand = Plus / Minus Query: 63 aaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggca 122 |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 80594 aaagaaccagatttcgtaaacaacatagaggaagaatgaaaggaatatcctatcgaggga 80535 Query: 123 atcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcga 182 ||| |||||| || || ||||||||||||||||||||||| || |||||||| || | | Sbjct: 80534 atcatatttgcttcggaagatatgctcttcaagcacttgagccagcttggataacatcta 80475 Query: 183 gacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatat 242 |||| |||||||| ||||| | ||||| ||||| ||| || || |||||| |||||| Sbjct: 80474 gacaaatagaagcgggacggcgggcaatgtcacgaaatgttcgccgaggtggacaaatat 80415 Query: 243 gggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggct 302 ||||||| |||||||| ||||||||||||||| ||||||| || |||||||||||||| | Sbjct: 80414 gggtacgcatatttccagacaaaccggttacagtaagacctactgaaacacgtatgggtt 80355 Query: 303 cgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatg 362 | ||||| || || ||||||||||||||||| || |||||||| || |||||||||| Sbjct: 80354 caggaaaaggttctcccgaatattgggtagctgtcgttaaacctgggaaaatactttatg 80295 Query: 363 aaatggg 369 ||||||| Sbjct: 80294 aaatggg 80288 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||| || | ||| |||||||| || ||||| ||||| Sbjct: 80085 aaaatgatatgattcaacctcaaactcatttgaatgtagctgataatagcggagc 80031
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 250 bits (126), Expect = 5e-63 Identities = 145/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1070 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1129 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat-cac 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1130 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatccac 1189 Query: 178 ggcgagacagatagaagcaggacgaagagc 207 | |||||||||||||||||||||||||||| Sbjct: 1190 gtcgagacagatagaagcaggacgaagagc 1219
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 250 bits (126), Expect = 5e-63 Identities = 145/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1073 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1132 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat-cac 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1133 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatccac 1192 Query: 178 ggcgagacagatagaagcaggacgaagagc 207 | |||||||||||||||||||||||||||| Sbjct: 1193 gtcgagacagatagaagcaggacgaagagc 1222
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 250 bits (126), Expect = 5e-63 Identities = 145/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1078 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1137 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat-cac 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1138 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatccac 1197 Query: 178 ggcgagacagatagaagcaggacgaagagc 207 | |||||||||||||||||||||||||||| Sbjct: 1198 gtcgagacagatagaagcaggacgaagagc 1227
>emb|X06734.1|CHZMRP14 Maize chloroplast genes for ribosomal proteins L14, S8 and L16 partial Length = 1287 Score = 248 bits (125), Expect = 2e-62 Identities = 149/157 (94%) Strand = Plus / Plus Query: 314 tcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatgggggga 373 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct: 4 tcccccgaatattgggtagccgttgttaaaccaggtcgaatactttatgaaatgagcgga 63 Query: 374 gtatctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccatacga 433 ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 64 gtatccgaaactgtagctagagcagctatctctatagctgccagtaaaatgcccatacga 123 Query: 434 agtcaatttattcgattagagatatagaaccctaaaa 470 ||||||||| |||||||||||||||||||||| |||| Sbjct: 124 agtcaatttcttcgattagagatatagaaccccaaaa 160 Score = 214 bits (108), Expect = 3e-52 Identities = 120/124 (96%) Strand = Plus / Plus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 187 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaatgg 246 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 247 aaatccaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 306 Query: 616 tcga 619 |||| Sbjct: 307 tcga 310
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 248 bits (125), Expect = 2e-62 Identities = 269/317 (84%) Strand = Plus / Minus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| |||||||||||||||||||||| ||| | ||| | || Sbjct: 86704 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgagagggatatcttatcgc 86645 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||| |||| ||||||||| || ||||||||||| || |||||||| Sbjct: 86644 ggcaatcgtatttgtttcggtaaatatgctctgcaggcacttgaaccggcgtggatcaca 86585 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| || ||||||| || ||| ||| ||| |||||||||||| Sbjct: 86584 tctagacaaatagaagcagggcgtcgagcaatgacgcgaaatgtacgacgtggtggaaaa 86525 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 | |||||||||||||||||| |||||||| ||||| ||||| | | |||||||||||| Sbjct: 86524 acatgggtacgtatatttccagacaaacccgttacgttaagagcggccgaaacacgtatg 86465 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || |||||||||||||||||| || || ||||| ||| | |||||| Sbjct: 86464 ggttcgggtaaaggaaaccccgaatattgggtagctgtcgtcaaaccgggtagaatactt 86405 Query: 359 tatgaaatggggggagt 375 ||||||||||| ||||| Sbjct: 86404 tatgaaatgggtggagt 86388 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagctcga 619 ||||| |||||||||||||||| |||| ||| ||||| || || || ||||| |||||| Sbjct: 86178 aaaatgatatgattcaacctcaaacccgtttgaatgtcgcggataacagtggggctcga 86120
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 248 bits (125), Expect = 2e-62 Identities = 143/149 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1066 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1125 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1126 ggcaatcgtatttgttttggtagatatgctcttcaagcccttgaacccgcttggatcacg 1185 Query: 179 gcgagacagatagaagcaggacgaagagc 207 ||||||||||||||||||| |||||||| Sbjct: 1186 tcgagacagatagaagcaggtcgaagagc 1214
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 248 bits (125), Expect = 2e-62 Identities = 144/149 (96%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 951 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1010 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1011 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgc-tggatcacg 1069 Query: 179 gcgagacagatagaagcaggacgaagagc 207 |||||||||||||||||||||||||||| Sbjct: 1070 tcgagacagatagaagcaggacgaagagc 1098
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 246 bits (124), Expect = 7e-62 Identities = 133/136 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct: 979 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatcttgccga 1038 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1039 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1098 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1099 gcgagacagatagaag 1114
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 246 bits (124), Expect = 7e-62 Identities = 133/136 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1004 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaagggaaaatcctgccga 1063 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1123 Query: 179 gcgagacagatagaag 194 || ||||||||||||| Sbjct: 1124 gctagacagatagaag 1139
>gb|DQ069416.1| Ginkgo biloba ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 414 Score = 246 bits (124), Expect = 7e-62 Identities = 289/344 (84%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| | |||||| ||||||||||| ||||||||||| |||| ||| || Sbjct: 13 cccaaaagaacaaaatttcgtaaacaacataggggaagaatgaagggaatatctcatcgg 72 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct: 73 ggcaatcgtatttgttttggtagattcgctcttcaggcacttgaacccgcttggattaca 132 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||| |||||||| |||||| ||||||| || || ||||| |||||||| ||||| Sbjct: 133 tctgaacaaatagaagcgggacgacgagcaattactcgctatgcccgtcgtggcggaaag 192 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 |||||||||||||||| |||||||||||| ||||| | ||||| | |||||||||||| Sbjct: 193 atatgggtacgtatatatcccgacaaacctattacaatgagacctgcagaaacacgtatg 252 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || ||||| || || || ||||||| |||||| | || || | |||||||| |||||| Sbjct: 253 ggttcggggaaaggatctaccgaatactgggtatctgtcgtcaggccaggtcgaatactt 312 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctat 402 |||||||| || |||||||| || |||||||||||||||||||| Sbjct: 313 tatgaaataggcggagtatcagagactgtagctagagcagctat 356
>dbj|AB116628.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 486 Score = 244 bits (123), Expect = 3e-61 Identities = 281/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>dbj|AB116625.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, strain: CdK/2 Length = 484 Score = 244 bits (123), Expect = 3e-61 Identities = 281/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>dbj|AB062413.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, country:China:Xinjian Length = 486 Score = 244 bits (123), Expect = 3e-61 Identities = 281/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>dbj|AB062412.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, country:China:Ningxia, Yanchi Length = 485 Score = 244 bits (123), Expect = 3e-61 Identities = 281/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>dbj|AB062411.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 486 Score = 244 bits (123), Expect = 3e-61 Identities = 281/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>dbj|AB201297.1| Prunus campanulata chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 161 (TFA) Length = 414 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>dbj|AB201296.1| Prunus pseudocerasus chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 009 (TFA) Length = 419 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>dbj|AB201294.1| Prunus subhirtella var. ascendens chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 152 (TFA) Length = 419 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>dbj|AB201293.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 093 (TFA) Length = 412 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>dbj|AB201292.1| Prunus apetala chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 164 (TFA) Length = 413 Score = 242 bits (122), Expect = 1e-60 Identities = 218/250 (87%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 242 bits (122), Expect = 1e-60 Identities = 144/150 (96%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||| | |||| Sbjct: 1081 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcttgccga 1140 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1200 Query: 179 gcgagaca-gatagaagcaggacgaagagc 207 ||||||| ||||||||||||||||||||| Sbjct: 1201 tcgagacacgatagaagcaggacgaagagc 1230
>dbj|AB077440.1| Incarvillea potaninii plastid DNA, intron region Length = 536 Score = 242 bits (122), Expect = 1e-60 Identities = 260/306 (84%) Strand = Plus / Plus Query: 71 agatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggcaatcgtatt 130 |||||||| |||| |||||||||||||||||| |||| ||| | ||||| |||| |||| Sbjct: 8 agatttcgtaaaccacatagaggaagaatgaagggaatatcttatcgaggtaatcatatt 67 Query: 131 tgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagacagata 190 | ||| |||| |||||||||||| ||||||||||| |||||||| || | ||||| || Sbjct: 68 tctttcggtaaatatgctcttcaggcacttgaacctgcttggatgacatctagacaaatt 127 Query: 191 gaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggtacgt 250 |||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 128 gaagcaggtcgacgagcaataacacgaaatgcacgccgtggtggaaaaatatgggtccgt 187 Query: 251 atatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcgggaaag 310 |||||||| |||||||| ||||| ||||| | || |||||||||||||| ||||| || Sbjct: 188 atatttccagacaaaccagttaccgtaagatctactgaaacacgtatgggttcggggaaa 247 Query: 311 gggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatgggg 370 || ||| ||||| |||||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 248 ggaaaccctgaatactgggtagctgttgttaaaccggggcgaatactatatgaaatgggt 307 Query: 371 ggagta 376 |||||| Sbjct: 308 ggagta 313 Score = 44.1 bits (22), Expect = 0.54 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 567 atatgattcaacctcagacccttttaaatg 596 ||||||||||||||||| |||||||||||| Sbjct: 500 atatgattcaacctcag-cccttttaaatg 528
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 240 bits (121), Expect = 5e-60 Identities = 143/149 (95%), Gaps = 1/149 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| || |||||||||||||||||||| |||||||||| |||| Sbjct: 1038 cccaaaagaaccagatttcgtaaccaacatagaggaagaatgaagggaaaatcctgccga 1097 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgga-tcac 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1098 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggactcac 1157 Query: 178 ggcgagacagatagaagcaggacgaagag 206 | ||||||||||||||||||||||||||| Sbjct: 1158 gtcgagacagatagaagcaggacgaagag 1186
>dbj|AB112068.1| Scutellaria baicalensis chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 485 Score = 240 bits (121), Expect = 5e-60 Identities = 238/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaatcgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaaaccagttacagtaagacccgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 238 bits (120), Expect = 2e-59 Identities = 132/136 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1082 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1141 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1201 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1202 gcgagacagatagaag 1217
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 238 bits (120), Expect = 2e-59 Identities = 132/136 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1050 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1109 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1169 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1170 tcgagacagatagaag 1185
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 238 bits (120), Expect = 2e-59 Identities = 132/136 (97%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1058 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 1117 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1118 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1177 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1178 tcgagacagatagaag 1193
>dbj|AB116624.1| Cistanche deserticola chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, strain: CdK/1 Length = 484 Score = 236 bits (119), Expect = 7e-59 Identities = 280/331 (84%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| ||||||||||||||||||||||||| |||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccacttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagataaaccagttacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>gb|AY115835.1| Pinus krempfii ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1114 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 835 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 894 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 895 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 954 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 955 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1014 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1015 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1074 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1075 tccgggaaaggatctcccgaatattgggta 1104
>gb|AY115834.1| Pinus squamata ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115833.1| Pinus gerardiana ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1119 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 840 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 899 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 900 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 959 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 960 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1019 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1020 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1079 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1080 tccgggaaaggatctcccgaatattgggta 1109
>gb|AY115832.1| Pinus bungeana ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1119 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 840 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgtggc 899 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 900 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 959 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 960 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1019 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1020 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1079 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1080 tccgggaaaggatctcccgaatattgggta 1109
>gb|AY115831.1| Pinus balfouriana specimen-voucher Kew1969.10666 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115830.1| Pinus balfouriana specimen-voucher Olinecm11 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115829.1| Pinus longaeva specimen-voucher Kew1972.6349 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115828.1| Pinus longaeva specimen-voucher DSG3099 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115827.1| Pinus aristata specimen-voucher Kew1992.747 Colorado ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115826.1| Pinus aristata specimen-voucher DSG3299 Colorado ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1110 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 831 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 890 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 891 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 950 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 951 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1010 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1011 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1070 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1071 tccgggaaaggatctcccgaatattgggta 1100
>gb|AY115825.1| Pinus nelsonii ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115824.1| Pinus rzedowskii ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115823.1| Pinus pinceana specimen-voucher DSG8899 Coahuila ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115822.1| Pinus pinceana specimen-voucher DSG3998 Hidalgo ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115821.1| Pinus maximartinezii ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115820.1| Pinus quadrifolia ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115819.1| Pinus juarezensis specimen-voucher DSG1099 Baja California Norte ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115818.1| Pinus juarezensis specimen-voucher DSG1499 Baja California Norte ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115817.1| Pinus monophylla specimen-voucher DSG2399 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115816.1| Pinus monophylla specimen-voucher Kew1986.5767 California ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115815.1| Pinus discolor ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115814.1| Pinus johannis specimen-voucher DSG2001 San Luis Potosi ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115813.1| Pinus johannis specimen-voucher DSG8199 Zacatecas ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1112 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 833 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 892 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 893 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 952 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 953 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1012 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1013 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1072 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1073 tccgggaaaggatctcccgaatattgggta 1102
>gb|AY115812.1| Pinus catarinae specimen-voucher DSG1301 Nuevo Leon ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115811.1| Pinus catarinae specimen-voucher DSG6899 Chapingo66 ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115810.1| Pinus remota specimen-voucher DSG801 Coahuila ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115809.1| Pinus remota specimen-voucher DSG19298 Coahuila ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115808.1| Pinus edulis specimen-voucher Kew1995.3959 Colorado ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115807.1| Pinus edulis specimen-voucher DSG3399 Colorado ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115806.1| Pinus culminicola ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1115 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 836 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 895 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 896 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 955 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 956 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1015 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1016 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1075 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1076 tccgggaaaggatctcccgaatattgggta 1105
>gb|AY115805.1| Pinus cembroides subsp. lagunae ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1108 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 829 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 888 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 889 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 948 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 949 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1008 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1009 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1068 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1069 tccgggaaaggatctcccgaatattgggta 1098
>gb|AY115804.1| Pinus cembroides subsp. orizabensis ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1108 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 829 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 888 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 889 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 948 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 949 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1008 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1009 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1068 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1069 tccgggaaaggatctcccgaatattgggta 1098
>gb|AY115803.1| Pinus cembroides ribosomal protein L16 (rpl16) gene, partial cds; chloroplast gene for chloroplast product Length = 1108 Score = 234 bits (118), Expect = 3e-58 Identities = 232/270 (85%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| | |||||| ||||||||||| ||||||||||||||| ||| | ||| ||| Sbjct: 829 aaaagaacaaaatttcgtaaacaacataggggaagaatgaaaggagtatcttaccgcggc 888 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct: 889 aatcgcatttgtttcggtagattcgctcttcaagcacttgaacccgcttggatcacatct 948 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 | ||||||||||| ||||||||| | || || || ||||| |||||||||||||||||| Sbjct: 949 gggcagatagaagccggacgaagaacgattactcgttatgcccgtcgtggtggaaaaata 1008 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||||| Sbjct: 1009 tgggtacgtatatttcccgacaaacctattacaatgagacctgcagaaacacgtatgggt 1068 Query: 302 tcgggaaaggggtcccccgaatattgggta 331 || || || || || ||||||||||||||| Sbjct: 1069 tccgggaaaggatctcccgaatattgggta 1098
>dbj|AB201295.1| Prunus maximowiczii chloroplast rpl16 gene for ribosomal protein L16, partial cds, specimen_voucher:Cherry-Ohta 158 (TFA) Length = 413 Score = 234 bits (118), Expect = 3e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 127 tatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcgagaca 186 |||||| || |||||||| ||||||||||| |||||||||||||||||||| | ||||| Sbjct: 1 tatttgcttcggtagatacgctcttcaagcgcttgaacccgcttggatcacatctagaca 60 Query: 187 gatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatatgggt 246 ||||||||||| || ||||||| |||||| | ||||| || ||||||||||||||||| Sbjct: 61 aatagaagcagggcggcgagcaatgacacgaaacgcacgccgcggtggaaaaatatgggt 120 Query: 247 acgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggctcggg 306 ||| |||||||| |||||||| |||||| ||||||| || |||||||||||||| ||||| Sbjct: 121 acgcatatttccagacaaacccgttacagtaagacctacagaaacacgtatgggttcggg 180 Query: 307 aaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaat 366 || || || ||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 181 taaaggatctcccgaatattgggtagctgttgttaaacccggtagaatactttatgaaat 240 Query: 367 ggggggagta 376 | | |||||| Sbjct: 241 gagcggagta 250
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 234 bits (118), Expect = 3e-58 Identities = 265/314 (84%) Strand = Plus / Plus Query: 63 aaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggca 122 |||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||| | Sbjct: 5008 aaagaaccagatttcgtaaacaacatagaggaagaatgaagggaatatcctatcgaggta 5067 Query: 123 atcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcga 182 ||| |||||| || || |||||||||||||| |||||||| || |||||||| || | | Sbjct: 5068 atcatatttgcttcggaagatatgctcttcaggcacttgagccagcttggataacatcta 5127 Query: 183 gacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatat 242 |||| |||||||| ||||| | ||||| || || ||| || || |||||| |||||| Sbjct: 5128 gacaaatagaagcgggacggcgggcaatgtcaagaaatgttcggcgaggtggacaaatat 5187 Query: 243 gggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggct 302 |||||||||| ||||| ||||||||||||||| ||||||| || |||||||||||||| | Sbjct: 5188 gggtacgtatttttccagacaaaccggttacagtaagacctactgaaacacgtatgggtt 5247 Query: 303 cgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatg 362 | ||||| || | ||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 5248 caggaaaaggatttcccgaatattgggtagctgttgttaaacctgggaaaatactttatg 5307 Query: 363 aaatggggggagta 376 ||||||| |||||| Sbjct: 5308 aaatgggtggagta 5321 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| |||||||||||||||| || | ||| |||||||| Sbjct: 5528 aaaatgatatgattcaacctcaaactcatttgaatgtagc 5567
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 234 bits (118), Expect = 3e-58 Identities = 265/314 (84%) Strand = Plus / Minus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||||||||| || |||||||||||||||||||||||||||| |||| ||||| Sbjct: 79473 aaaagaaccagattccgtaaacaacatagaggaagaatgaaaggaatatcccatcgaggt 79414 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||| ||||| ||||| |||||||||||||| ||||||||||| |||||||| || | Sbjct: 79413 aatcaaatttgctttggaagatatgctcttcaggcacttgaaccagcttggataacatct 79354 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| |||||||| || || || ||||| ||||| ||| || || |||||| ||||| Sbjct: 79353 agacaaatagaagcggggcggagggcaatgtcacgaaatgtgcgccgaggtggacaaata 79294 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 |||||||| |||||||| || ||||| |||||| ||||||| || ||||| |||||||| Sbjct: 79293 tgggtacgcatatttccggataaacctgttacagtaagacctaccgaaacgcgtatgggt 79234 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||||||||| || |||||||||||||||||||| |||||||| || ||| ||||| Sbjct: 79233 tcgggaaagggatctcccgaatattgggtagccgtagttaaacccggaaaaatagtttat 79174 Query: 362 gaaatggggggagt 375 |||||||| ||||| Sbjct: 79173 gaaatgggcggagt 79160 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||| |||| |||||||||||| || ||||| ||||| Sbjct: 78951 aaaatgatatgattcaacctcaaacccatttaaatgtagccgataatagcggagc 78897
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 965 aaaagaaccagatttcgcaaacaacatcgaggaagaatgaaaggaaaatcctgccgaggc 1024 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 1025 aatcgtatttgttttggtagatatgctcttcaagcactggaacctgcttggatcacggcg 1084 Query: 182 agacagatagaag 194 ||||||||||||| Sbjct: 1085 agacagatagaag 1097
>dbj|AB112071.1| Scutellaria indica chloroplast rpl16 gene for robosomal protein large subunit 16, partial cds Length = 484 Score = 232 bits (117), Expect = 1e-57 Identities = 237/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaatcgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaaaccagttacagtaagacctgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>dbj|AB112069.1| Scutellaria galericulata chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 485 Score = 232 bits (117), Expect = 1e-57 Identities = 237/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaatcgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaaaccagttacagtaagacctgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>dbj|AB112067.1| Scutellaria altissima chloroplast rpl16 gene for ribosormal protein large subunit 16, partial cds Length = 485 Score = 232 bits (117), Expect = 1e-57 Identities = 237/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaatcgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaaaccagttacagtaagacctgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>dbj|AB116626.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, strain: CsiCn/1 Length = 498 Score = 232 bits (117), Expect = 1e-57 Identities = 225/261 (86%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| || |||||||||||||| Sbjct: 78 acatccagacaaattgaagcgggtcgacgagcaatgacacgaaatacacgtcgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||| ||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatctgggtccgtatatttccagataaaccagttacagtaagaccggccgaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||||| | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccagcacaaata 257 Query: 356 ctttatgaaatggggggagta 376 || ||||||||||| |||||| Sbjct: 258 ctatatgaaatgggtggagta 278
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 230 bits (116), Expect = 4e-57 Identities = 131/136 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1090 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1149 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1209 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1210 tcgagacagatagaag 1225
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 230 bits (116), Expect = 4e-57 Identities = 131/136 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1097 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1156 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1157 ggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttggatcacg 1216 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1217 tcgagacagatagaag 1232
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 230 bits (116), Expect = 4e-57 Identities = 131/136 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1090 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1149 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1150 ggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttggatcacg 1209 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1210 tcgagacagatagaag 1225
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 230 bits (116), Expect = 4e-57 Identities = 131/136 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1093 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1152 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1212 Query: 179 gcgagacagatagaag 194 ||||| |||||||||| Sbjct: 1213 gcgaggcagatagaag 1228
>dbj|AB201448.1| Prunus salicina DNA, microsatellite marker TPScp1, TPScp2 Length = 1215 Score = 228 bits (115), Expect = 2e-56 Identities = 172/191 (90%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||||||||||||||||| ||| | ||| Sbjct: 1025 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaaaggaatatcttatcga 1084 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1085 ggcaatcgtatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcaca 1144 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| || ||||||| |||||| | |||||||||||||||||| Sbjct: 1145 tctagacaaatagaagcagggcggcgagcaatgacacgaaacgcacgtcgtggtggaaaa 1204 Query: 239 atatgggtacg 249 ||||||||||| Sbjct: 1205 atatgggtacg 1215
>dbj|AB240532.1| Prunus apetala chloroplast rpl16 gene, exon region, partial sequence Length = 1221 Score = 228 bits (115), Expect = 2e-56 Identities = 172/191 (90%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||||||||||||||||||||||| ||| | ||| Sbjct: 1031 cccaaaagaaccagattccgtaaacaacatagaggaagaatgaaaggaatatcttatcga 1090 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1091 ggcaatcgtatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcaca 1150 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| || ||||||| |||||| | |||||||||||||||||| Sbjct: 1151 tctagacaaatagaagcagggcggcgagcaatgacacgaaacgcacgtcgtggtggaaaa 1210 Query: 239 atatgggtacg 249 ||||||||||| Sbjct: 1211 atatgggtacg 1221
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 226 bits (114), Expect = 7e-56 Identities = 126/130 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1119 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1178 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 1238 Query: 179 gcgagacaga 188 ||||||||| Sbjct: 1239 tcgagacaga 1248
>gb|M80799.1|VIRCPRPL Vigna unguiculata chloroplast ribosomal protein (L16 and L14) genes, 3' and 5' end respectively Length = 1268 Score = 226 bits (114), Expect = 7e-56 Identities = 264/314 (84%) Strand = Plus / Plus Query: 63 aaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggca 122 |||||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||| | Sbjct: 608 aaagaaccagatttcgtaaacaacatagaggaagaatgaagggaatatcctatcgaggta 667 Query: 123 atcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcga 182 || |||||| || || |||||||||||||| |||||||| || |||||||| || | | Sbjct: 668 ataatatttgcttcggaagatatgctcttcaggcacttgagccagcttggataacatcta 727 Query: 183 gacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaatat 242 |||| |||||||| ||||| | ||||| || || ||| || || |||||| |||||| Sbjct: 728 gacaaatagaagcgggacggcgggcaatgtcaagaaatgttcgccgaggtggacaaatat 787 Query: 243 gggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggct 302 |||||||||| ||||| ||||||||||||||| ||||||| || |||||||||||||| | Sbjct: 788 gggtacgtatttttccagacaaaccggttacagtaagacctactgaaacacgtatgggtt 847 Query: 303 cgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttatg 362 | ||||| || | ||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 848 caggaaaaggatttcccgaatattgggtagctgttgttaaacctgggaaaatactttatg 907 Query: 363 aaatggggggagta 376 ||||||| |||||| Sbjct: 908 aaatgggtggagta 921 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagc 600 ||||| |||||||||||||||| || | ||| |||||||| Sbjct: 1119 aaaatgatatgattcaacctcaaactcatttgaatgtagc 1158
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 224 bits (113), Expect = 3e-55 Identities = 135/141 (95%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1068 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1127 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat-cac 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1128 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatccac 1187 Query: 178 ggcgagacagatagaagcagg 198 | |||| |||||||||||||| Sbjct: 1188 gtcgaggcagatagaagcagg 1208
>dbj|AB112072.1| Scutellaria lateriflora chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 485 Score = 224 bits (113), Expect = 3e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaatcgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| ||||| || |||||| ||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaagccagttacagtaagacctgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 atggggtcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>dbj|AB112070.1| Scutellaria incana chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 485 Score = 224 bits (113), Expect = 3e-55 Identities = 236/277 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||| |||||||||||||| |||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaggcacttgaacccgcgtggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgggcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||||||||| ||||||||||| |||||||| |||||| ||||||| ||||||||||| Sbjct: 138 aaaatatgggtccgtatatttccagacaaaccagttacagtaagacctgcggaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 |||| ||||| || || ||||| |||||||||||||| ||||||||||| || | ||| Sbjct: 198 ttgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccggggagaata 257 Query: 356 ctttatgaaatggggggagtatctgaaactgtagcta 392 || || |||||||| |||||| |||||| | |||||| Sbjct: 258 ctatacgaaatgggtggagtaactgaaaatatagcta 294
>dbj|AB116627.1| Cistanche sinensis chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, strain: CsiCn/2 Length = 498 Score = 224 bits (113), Expect = 3e-55 Identities = 224/261 (85%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| | ||||| |||||| || |||||||||||||| Sbjct: 78 acatccagacaaattgaagcgggtcgacgggcaatgacacgaaatacacgtcgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||| ||||| ||||||||||| || ||||| |||||| ||||||| | ||||||||| Sbjct: 138 aaaatctgggtccgtatatttccagataaaccagttacagtaagaccggccgaaacacgt 197 Query: 296 atgggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtata 355 ||||| ||||| || || ||||| |||||||||||||| ||||||||||||| | ||| Sbjct: 198 atgggttcggggaaaggatcccctgaatattgggtagctgttgttaaaccagcacaaata 257 Query: 356 ctttatgaaatggggggagta 376 || ||||||||||| |||||| Sbjct: 258 ctatatgaaatgggtggagta 278
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 933 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 992 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 993 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1052 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1053 gcgagacagatagaag 1068
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1049 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1108 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1109 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1168 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1169 gcgagacagatagaag 1184
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657155 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 5657096 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 5657095 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 5657036 Query: 616 tcga 619 |||| Sbjct: 5657035 tcga 5657032 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 316 ccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatggggggagt 375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5657337 ccccgaatattgggtagccgttgttaaaccaggtcgaatactttatgaaatgggcggagt 5657278 Query: 376 atctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccatacgaag 435 ||| |||| |||||||| ||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 5657277 atccgaaattgtagctatagcagctatttccatagctgccagcaaaatgcccatacgaag 5657218 Query: 436 tcaatttattcgattagagatata 459 ||||||| |||| ||||| ||||| Sbjct: 5657217 tcaatttcttcggttagaaatata 5657194
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 222 bits (112), Expect = 1e-54 Identities = 319/388 (82%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || ||||||||| |||||||||||||||||||| ||| ||| Sbjct: 44150 cccaaaagaaccagattccgtaaacaacatcgaggaagaatgaaaggaaaagcctatcga 44209 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||| |||| || || | |||||||||||| |||||||| |||||||||||||| Sbjct: 44210 ggtaatacaatttccttcggaaaatatgctcttcaggcacttgagcccgcttggatcaca 44269 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| ||| | ||||| ||||| ||| || || ||||| ||| Sbjct: 44270 tctagacaaatagaagcagggcgacgggcaatgtcacgaaatgttcgccgaggtgggaaa 44329 Query: 239 atatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatg 298 ||||||||||| |||||||| |||||||| |||||| ||||||| || ||||| |||||| Sbjct: 44330 atatgggtacgcatatttccagacaaacctgttacagtaagacctaccgaaacgcgtatg 44389 Query: 299 ggctcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactt 358 || |||||||| || || ||||||||||||||||| || |||||||| || |||||| Sbjct: 44390 ggttcgggaaaaggatctcccgaatattgggtagctgtcgttaaacccggcaaaatactt 44449 Query: 359 tatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagt 418 ||||||||||| || || | |||| | |||||||| ||||| || |||||||| Sbjct: 44450 tatgaaatgggaggggtcccagaaaatatagctagaaaggctatttcaatagcggcatcc 44509 Query: 419 aaaatgcccatacgaagtcaatttattc 446 |||||||| ||||||| |||||| |||| Sbjct: 44510 aaaatgcctatacgaactcaattcattc 44537 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 561 aaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 ||||| |||||||||||||||| ||| |||||||||||| || ||||| ||||| Sbjct: 44666 aaaatgatatgattcaacctcaaacctatttaaatgtagccgataatagcggagc 44720
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1076 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1135 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1136 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1195 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1196 gcgagacagatagaag 1211
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1060 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1119 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1120 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1179 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1180 gcgagacagatagaag 1195
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1127 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1186 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1187 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacctgcttggatcacg 1246 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1247 tcgagacagatagaag 1262
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1057 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1116 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 1117 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttgggttacg 1176 Query: 179 gcgagacagatagaag 194 ||||| |||||||||| Sbjct: 1177 gcgaggcagatagaag 1192
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 222 bits (112), Expect = 1e-54 Identities = 130/136 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1074 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 1133 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1134 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccacttggattacg 1193 Query: 179 gcgagacagatagaag 194 ||||| |||||||||| Sbjct: 1194 gcgaggcagatagaag 1209
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657148 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 5657089 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 5657088 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 5657029 Query: 616 tcga 619 |||| Sbjct: 5657028 tcga 5657025 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 316 ccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatggggggagt 375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5657330 ccccgaatattgggtagccgttgttaaaccaggtcgaatactttatgaaatgggcggagt 5657271 Query: 376 atctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccatacgaag 435 ||| |||| |||||||| ||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 5657270 atccgaaattgtagctatagcagctatttccatagctgccagcaaaatgcccatacgaag 5657211 Query: 436 tcaatttattcgattagagatata 459 ||||||| |||| ||||| ||||| Sbjct: 5657210 tcaatttcttcggttagaaatata 5657187
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 222 bits (112), Expect = 1e-54 Identities = 121/124 (97%) Strand = Plus / Minus Query: 496 ggtttttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11678 ggttcttctttctggaaagacaatatttctttcatccttttgcattgaaataacaaattg 11619 Query: 556 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagacaatagtggagc 615 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 11618 aaatcaaaataatatgattcaacctcagacccttttaaatgtagcagataacagtggagc 11559 Query: 616 tcga 619 |||| Sbjct: 11558 tcga 11555 Score = 198 bits (100), Expect = 2e-47 Identities = 133/144 (92%) Strand = Plus / Minus Query: 316 ccccgaatattgggtagccgttgttaaaccaggtcgtatactttatgaaatggggggagt 375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 11860 ccccgaatattgggtagccgttgttaaaccaggtcgaatactttatgaaatgggcggagt 11801 Query: 376 atctgaaactgtagctagagcagctatctccatagcggccagtaaaatgcccatacgaag 435 ||| |||| |||||||| ||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 11800 atccgaaattgtagctatagcagctatttccatagctgccagcaaaatgcccatacgaag 11741 Query: 436 tcaatttattcgattagagatata 459 ||||||| |||| ||||| ||||| Sbjct: 11740 tcaatttcttcggttagaaatata 11717
>dbj|AB204877.1| Pyrus pyrifolia chloroplast rpl16 gene for ribosomal protein L16, partial sequence, and intron sequence Length = 1203 Score = 220 bits (111), Expect = 4e-54 Identities = 171/191 (89%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||||||||| || |||||||| ||||||||||||||||||| ||| | ||| Sbjct: 1013 cccaaaagaaccagattccgtaaacaacacagaggaagaatgaaaggaatatcttatcga 1072 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || ||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 1073 ggtaatcgtatttgcttcggtagatatgctcttcaagcgcttgaacccgcttggatcaca 1132 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaa 238 | ||||| ||||||||||| || ||||||| |||||| |||||||||||||||||||| Sbjct: 1133 tctagacaaatagaagcagggcggcgagcaatgacacgaaatgcacgtcgtggtggaaaa 1192 Query: 239 atatgggtacg 249 ||||||||||| Sbjct: 1193 atatgggtacg 1203
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 218 bits (110), Expect = 2e-53 Identities = 141/150 (94%), Gaps = 1/150 (0%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||| Sbjct: 1000 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatccggccga 1059 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggat-cac 177 |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 1060 ggcaattgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatccac 1119 Query: 178 ggcgagacagatagaagcaggacgaagagc 207 ||||||||||||||||||||||||||||| Sbjct: 1120 agcgagacagatagaagcaggacgaagagc 1149
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 218 bits (110), Expect = 2e-53 Identities = 125/130 (96%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1089 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1148 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1149 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccacttggatcacg 1208 Query: 179 gcgagacaga 188 ||||| |||| Sbjct: 1209 gcgaggcaga 1218
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 216 bits (109), Expect = 7e-53 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1090 cccaaaagnaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1149 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1150 ggcaatcgtatttgttttggtagatatgctctgcaagcacttgaacccgcttggatcacg 1209 Query: 179 gcgagacagatagaag 194 ||||| ||||||||| Sbjct: 1210 tcgagatagatagaag 1225
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 214 bits (108), Expect = 3e-52 Identities = 126/132 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1024 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1083 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1084 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 1143 Query: 179 gcgagacagata 190 |||||||||||| Sbjct: 1144 gcgagacagata 1155
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1051 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1110 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1111 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 1170 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1171 gcgagacagatagaag 1186
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| |||| Sbjct: 1031 cccaaaagaactagatttcgtaaacaacacagaggaagaatgaagggaaaatcctgccga 1090 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1091 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1150 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1151 gcgagacagatagaag 1166
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 942 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1001 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1002 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacctgcttggatcaca 1061 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1062 gcgagacagatagaag 1077
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||| |||| Sbjct: 1108 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaagtcctgccga 1167 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1168 ggcaatcgtatttgttttggcagatatgctcttcaagcacttgaacccacttggatcacg 1227 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1228 gcgagacagatagaag 1243
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||| ||| Sbjct: 1047 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaagtcctgccgg 1106 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcaca 1166 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1167 gcgagacagatagaag 1182
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1072 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1131 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 1132 ggcaatcgtatttgttttggtagatacgctcttcaagtacttgaacccgcttggatcaca 1191 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1192 gcgagacagatagaag 1207
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| |||| Sbjct: 972 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggcaaatcctgccga 1031 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcaca 1091 Query: 179 gcgagacagatagaag 194 |||||||| ||||||| Sbjct: 1092 gcgagacaaatagaag 1107
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1045 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1104 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 1105 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 1164 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1165 gcgagacagatagaag 1180
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 214 bits (108), Expect = 3e-52 Identities = 129/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1055 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1114 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1115 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 1174 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1175 gcgagacagatagaag 1190
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 212 bits (107), Expect = 1e-51 Identities = 128/135 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 522 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 581 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 582 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 641 Query: 179 gcgagacagatagaa 193 ||||||||||||||| Sbjct: 642 gcgagacagatagaa 656
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 212 bits (107), Expect = 1e-51 Identities = 128/135 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 546 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 605 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 606 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 665 Query: 179 gcgagacagatagaa 193 ||||||||||||||| Sbjct: 666 gcgagacagatagaa 680
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 212 bits (107), Expect = 1e-51 Identities = 128/135 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 546 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 605 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 606 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 665 Query: 179 gcgagacagatagaa 193 ||||||||||||||| Sbjct: 666 gcgagacagatagaa 680
>dbj|AB062414.1| Cistanche salsa chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds, country:Turkey:Konya Length = 485 Score = 212 bits (107), Expect = 1e-51 Identities = 277/331 (83%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 116 cgaggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatc 175 ||||| |||| ||||| ||| || | |||||||||||||||||||||||||||||||||| Sbjct: 18 cgaggtaatcatatttctttcggcaaatatgctcttcaagcacttgaacccgcttggatc 77 Query: 176 acggcgagacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtgga 235 || | ||||| || ||||| || ||| ||||||| |||||| ||||||| ||||||||| Sbjct: 78 acatctagacaaattgaagcgggtcgacgagcaatgacacgaaatgcacgccgtggtgga 137 Query: 236 aaaatatgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgt 295 ||||| ||||| ||||||||||| || ||||| ||||| ||||||| | ||||||||| Sbjct: 138 aaaatttgggtccgtatatttccagataaaccaattacagtaagaccagccgaaacacgt 197 Query: 296 atgggctc-gggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtat 354 ||||| || |||||||| || |||||||||||||||||| ||||||||||| | || || Sbjct: 198 atgggttcggggaaaggagt-ccccgaatattgggtagctgttgttaaaccggaacgaat 256 Query: 355 actttatgaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggc 414 ||| ||||||||||| |||||| | |||| | |||||||| |||||| | ||||| || Sbjct: 257 actatatgaaatgggcggagtaaccgaaaatatagctagacgagctattttaatagcagc 316 Query: 415 cagtaaaatgcccatacgaagtcaatttatt 445 |||||||| ||||||| |||||||||| Sbjct: 317 atcaaaaatgcctatacgaactcaatttatt 347
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 210 bits (106), Expect = 4e-51 Identities = 127/134 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1011 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1070 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1071 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1130 Query: 179 gcgagacagataga 192 || ||||||||||| Sbjct: 1131 gcaagacagataga 1144
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 210 bits (106), Expect = 4e-51 Identities = 124/130 (95%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1093 cccaaaagaaccagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1152 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1153 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccacttggatcacg 1212 Query: 179 gcgagacaga 188 ||||||||| Sbjct: 1213 tcgagacaga 1222
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 208 bits (105), Expect = 2e-50 Identities = 126/133 (94%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 884 aaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggc 943 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 944 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaccgca 1003 Query: 182 agacagatagaag 194 ||||||||||||| Sbjct: 1004 agacagatagaag 1016
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| | |||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 796 cccaaaagaactatatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 855 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 856 ggcaatcgtatctgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 915 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 916 gcgagacagatagaag 931
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| |||| Sbjct: 916 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggcaaatcctgccga 975 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 976 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1035 Query: 179 gcgagacagatagaag 194 |||||||| ||||||| Sbjct: 1036 gcgagacaaatagaag 1051
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| |||| Sbjct: 943 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggcaaatcctgccga 1002 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1003 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcaca 1062 Query: 179 gcgagacagatagaag 194 |||||||| ||||||| Sbjct: 1063 gcgagacaaatagaag 1078
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| || |||||||||||||||||||| |||||||||| |||| Sbjct: 997 cccaaaagaactagatttcgtaaccaacatagaggaagaatgaagggaaaatcctgccga 1056 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 1057 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgagcccgcttggatcaca 1116 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1117 gcgagacagatagaag 1132
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1047 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1106 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 1107 ggcaatcgtatctgttttggtagatatgctcttcaagtacttgaaccagcttggatcaca 1166 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1167 gcgagacagatagaag 1182
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 893 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 952 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 953 ggcaatcgtatatgttttggtagatatgcccttcaagtacttgaacccgcttggatcaca 1012 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1013 gcgagacagatagaag 1028
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1012 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 1071 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1072 ggcaatcgtatatgttttggtagatatgcccttcaagtacttgaacccgcttggatcaca 1131 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1132 gcgagacagatagaag 1147
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1051 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1110 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 || |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1111 ggtaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 1170 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1171 gcgagacagatagaag 1186
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1031 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1090 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 1091 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 1150 Query: 179 gcgagacagatagaag 194 ||||| |||||||||| Sbjct: 1151 gcgaggcagatagaag 1166
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 888 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 947 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || Sbjct: 948 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacctgcttggattaca 1007 Query: 179 gcgagacagatagaag 194 |||||||||||||||| Sbjct: 1008 gcgagacagatagaag 1023
>gb|AY624417.1| Lilium regale ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1006 Score = 206 bits (104), Expect = 6e-50 Identities = 146/160 (91%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| | |||||| |||||||||||||||||||||||||||| ||| | ||| Sbjct: 847 cccaaaagaacaaaatttcgtaaacaacatagaggaagaatgaaaggaatatcttgtcga 906 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 907 ggcaatcgtatttgtttcggcggatacgctcttcaagcacttgaacccgcttggatcacg 966 Query: 179 gcgagacagatagaagcaggacgaagagcaataacacgat 218 || |||||||| |||||||||||||||||||| ||||||| Sbjct: 967 gctagacagatggaagcaggacgaagagcaatgacacgat 1006
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1064 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1123 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 1124 ggcaatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggattaca 1183 Query: 179 gcgagacagatagaag 194 ||||| |||||||||| Sbjct: 1184 gcgaggcagatagaag 1199
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1065 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccga 1124 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1125 ggcaatcatatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacc 1184 Query: 179 gcgagacagatagaag 194 || ||||||||||||| Sbjct: 1185 gcaagacagatagaag 1200
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 206 bits (104), Expect = 6e-50 Identities = 128/136 (94%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 |||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1081 cccaaaagaaccagtattcgtaaacaacatagaggaagaatgaagggaaaatcctaccga 1140 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1141 ggcaattgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggattacg 1200 Query: 179 gcgagacagatagaag 194 ||||||||||||||| Sbjct: 1201 tcgagacagatagaag 1216
>dbj|AB062415.1| Cistanche tubulosa chloroplast rpl16 gene for ribosomal protein large subunit 16, partial cds Length = 484 Score = 206 bits (104), Expect = 6e-50 Identities = 269/324 (83%) Strand = Plus / Plus Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||| | Sbjct: 24 aatcatatttgtttcggtaaatatgctcttcaagcacttgaacccgcgtggatcacatct 83 Query: 182 agacagatagaagcaggacgaagagcaataacacgatatgcacgtcgtggtggaaaaata 241 ||||| || |||||||| || ||||||| |||||| ||||||| |||||||||||||| Sbjct: 84 agacaaattgaagcaggtcggcgagcaatgacacgaaatgcacgccgtggtggaaaaatt 143 Query: 242 tgggtacgtatatttcccgacaaaccggttacactaagacccacggaaacacgtatgggc 301 | || ||||||||||| || ||||| |||||| ||||||| | |||||||||||||| Sbjct: 144 tttgtccgtatatttccagataaaccagttacagtaagaccagctgaaacacgtatgggt 203 Query: 302 tcgggaaaggggtcccccgaatattgggtagccgttgttaaaccaggtcgtatactttat 361 ||||| || || |||||||||||||||||||| ||||||||||| || ||||| ||| Sbjct: 204 tcggggaaaggatcccccgaatattgggtagctgttgttaaaccgaaacgaatactatat 263 Query: 362 gaaatggggggagtatctgaaactgtagctagagcagctatctccatagcggccagtaaa 421 |||||| | |||||| | |||| | |||||||| |||||| | ||||| || ||| Sbjct: 264 gaaatgagcggagtaaccgaaaatatagctagacgagctattttaatagcagcatcaaaa 323 Query: 422 atgcccatacgaagtcaatttatt 445 ||||| ||||||| |||||||||| Sbjct: 324 atgcctatacgaactcaatttatt 347
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 200 bits (101), Expect = 4e-48 Identities = 125/133 (93%) Strand = Plus / Plus Query: 62 aaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccgaggc 121 |||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 921 aaaagaactagatttcgtaaacaacatagaggaagaatgaagggaaaatcctgccgaggc 980 Query: 122 aatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacggcg 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 981 aatcgtatttgttttggtagatatgctcttcaagtacttgaacccgcttggatcacagca 1040 Query: 182 agacagatagaag 194 ||||| ||||||| Sbjct: 1041 agacaaatagaag 1053
>gb|AY624423.1| Nomocharis pardanthina ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 994 Score = 200 bits (101), Expect = 4e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| | |||||| |||||||||||||||||||||||||||| ||| | ||| Sbjct: 838 cccaaaagaacaaaatttcgtaaacaacatagaggaagaatgaaaggaatatcttgtcga 897 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 898 ggcaatcgtatttgtttcggcggatacgctcttcaagcacttgaacccgcttggatcacg 957 Query: 179 gcgagacagatagaagcaggacgaagagcaataacac 215 || |||||||| |||||||||||||||||||| |||| Sbjct: 958 gctagacagatggaagcaggacgaagagcaatgacac 994
>gb|AY624377.1| Fritillaria camtschatcensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1012 Score = 200 bits (101), Expect = 4e-48 Identities = 143/157 (91%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| | |||||| |||||||||||||||||||||||||||| ||| | ||| Sbjct: 856 cccaaaagaacaaaatttcgtaaacaacatagaggaagaatgaaaggaatatcttgtcga 915 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 ||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 916 ggcaatcgtatttgtttcggcggatacgctcttcaagcacttgaacccgcttggatcacg 975 Query: 179 gcgagacagatagaagcaggacgaagagcaataacac 215 || |||||||| |||||||||||||||||||| |||| Sbjct: 976 gctagacagatggaagcaggacgaagagcaatgacac 1012
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 198 bits (100), Expect = 2e-47 Identities = 127/136 (93%) Strand = Plus / Plus Query: 59 cccaaaagaaccagatttcgcaaacaacatagaggaagaatgaaaggaaaatccttccga 118 ||||||||||| |||||||| ||||||||||||||||||||||| || ||||||| |||| Sbjct: 817 cccaaaagaactagatttcgtaaacaacatagaggaagaatgaaggggaaatcctgccga 876 Query: 119 ggcaatcgtatttgttttggtagatatgctcttcaagcacttgaacccgcttggatcacg 178 |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 877 ggcaatcgtatttgttttggtatatatgctcttcaagtacttgaacccgcttggatcaca 936 Query: 179 gcgagacagatagaag 194 |||||||| ||||||| Sbjct: 937 gcgagacaaatagaag 952 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,277,273 Number of Sequences: 3902068 Number of extensions: 6277273 Number of successful extensions: 122920 Number of sequences better than 10.0: 1074 Number of HSP's better than 10.0 without gapping: 1080 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 119564 Number of HSP's gapped (non-prelim): 3042 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
