ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480176.1| Oryza sativa (japonica cultivar-group), mRNA 492 e-136
2dbj|AK070710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-136
3gb|AY106385.1| Zea mays PCO066310 mRNA sequence 389 e-105
4gb|BT017878.1| Zea mays clone EL01N0513H07.c mRNA sequence 155 1e-34
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
6dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
7dbj|AK071369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 9e-08
8emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4,... 52 0.001
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
10ref|XM_473308.1| Oryza sativa (japonica cultivar-group), predic... 48 0.022
11emb|AJ251365.1|NPL251365 Nicotiana plumbaginifolia mRNA for VAP27 48 0.022
12ref|NM_115924.2| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBREVI... 46 0.086
13ref|NM_001035826.1| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBR... 46 0.086
14ref|NM_001035827.1| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBR... 46 0.086
15ref|XM_473446.1| Oryza sativa (japonica cultivar-group), predic... 46 0.086
16gb|BT013294.1| Lycopersicon esculentum clone 134912R, mRNA sequence 46 0.086
17gb|AY364005.1| Arabidopsis thaliana VAP27-1 (VAP27-1) mRNA, comp... 46 0.086
18gb|AY065144.1| Arabidopsis thaliana putative protein (At3g60600;... 46 0.086
19gb|BT006297.1| Arabidopsis thaliana At3g60600 mRNA, complete cds 46 0.086
20emb|BX824022.1|CNS0A5M4 Arabidopsis thaliana Full-length cDNA Co... 46 0.086
21emb|BX822165.1|CNS0A5U3 Arabidopsis thaliana Full-length cDNA Co... 46 0.086
22emb|BX824970.1|CNS0A5JC Arabidopsis thaliana Full-length cDNA Co... 46 0.086
23gb|AY085922.1| Arabidopsis thaliana clone 19714 mRNA, complete s... 46 0.086
24dbj|AK066540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
25dbj|AK060752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
26gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete se... 44 0.34
27gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.34
28gb|DQ442658.1| Solanum chacoense VAP25 (VAP25) mRNA, complete cds 44 0.34
29ref|NM_130077.2| Arabidopsis thaliana structural molecule AT2G45... 42 1.3
30ref|NM_116234.2| Arabidopsis thaliana structural molecule AT4G00... 42 1.3
31ref|XM_480160.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
32ref|XM_507135.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.3
33gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete se... 42 1.3
34gb|AY050901.1| Arabidopsis thaliana At4g00170 mRNA sequence 42 1.3
35gb|AY093014.1| Arabidopsis thaliana putative VAMP-associated pro... 42 1.3
36gb|BT006283.1| Arabidopsis thaliana At2g45140 mRNA, complete cds 42 1.3
37emb|BX818981.1|CNS0A8RZ Arabidopsis thaliana Full-length cDNA Co... 42 1.3
38emb|BX821072.1|CNS0A8CY Arabidopsis thaliana Full-length cDNA Co... 42 1.3
39emb|BX821071.1|CNS0A8CA Arabidopsis thaliana Full-length cDNA Co... 42 1.3
40emb|BX822166.1|CNS0A5U4 Arabidopsis thaliana Full-length cDNA Co... 42 1.3
41emb|BX826486.1|CNS0A46O Arabidopsis thaliana Full-length cDNA Co... 42 1.3
42emb|BX842101.1|CNS09Y9V Arabidopsis thaliana Full-length cDNA Co... 42 1.3
43gb|AY088399.1| Arabidopsis thaliana clone 6457 mRNA, complete se... 42 1.3
44gb|AY087270.1| Arabidopsis thaliana clone 33482 mRNA, complete s... 42 1.3
45dbj|AK104886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
46dbj|AK069865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
47gb|BT001917.1| Arabidopsis thaliana clone C105174 putative proli... 42 1.3
48gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols c... 42 1.3
49ref|XM_467003.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
50emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.3
51gb|AC104509.6| Drosophila melanogaster X BAC RP98-20K1 (Roswell ... 40 5.3
52dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, ... 40 5.3
53dbj|AK073818.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
54gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 ... 40 5.3
55dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.3
56emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on ch... 40 5.3
57emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.3
58dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 5.3 
>ref|XM_480176.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1130

 Score =  492 bits (248), Expect = e-136
 Identities = 359/396 (90%), Gaps = 1/396 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccgccggcgagtctcctccgcatcgaccncatcgagctccgcttcccctttgagttgaag 62
           ||||||||||| |||||||||||||||| | |||| |||||||||||||| |||||||||
Sbjct: 167 ccgccggcgag-ctcctccgcatcgaccccgtcgaactccgcttccccttcgagttgaag 225

                                                                       
Query: 63  aagcagatctcgtgctcgatgcagctgtcgaatctcagcgacgactacatcgccttcaag 122
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 226 aagcagatctcgtgctcgatgcagctatcgaatctcagcgacgactacatcgccttcaag 285

                                                                       
Query: 123 gtgaaaactacaagcccaaagaaatactctgtgcggcccaacacaggggttgtcttgccg 182
           ||||||||||||||||||||||| || || |||||||| |||||||||||||||||||| 
Sbjct: 286 gtgaaaactacaagcccaaagaagtattcggtgcggcctaacacaggggttgtcttgcca 345

                                                                       
Query: 183 ntntctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatg 242
              ||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 346 cggtctacctgcgatgttgttgtgacaatgcaagcacagcgggaagccccgcctgacatg 405

                                                                       
Query: 243 cagtgcaaagataagttcctagtccagagcgtcgtcgcaccctctggcataaatgtgaag 302
           ||||||||||||||||||||||||||||||||| | ||||| || ||  ||| |||||||
Sbjct: 406 cagtgcaaagataagttcctagtccagagcgtcattgcaccttccggtgtaactgtgaag 465

                                                                       
Query: 303 gatgttacgggagagatgtttatgaaggaatctggaaataagattgaagaggtgaaattg 362
           ||| | |||||||| ||||||| |||||| || ||||||||| |||||||||| ||||||
Sbjct: 466 gatatcacgggagaaatgtttacgaaggagtccggaaataaggttgaagaggtaaaattg 525

                                               
Query: 363 cgagtcacctatgttgcacctncacagccaccatct 398
           ||||| |||||| |||| ||| ||||||||||||||
Sbjct: 526 cgagtgacctatattgctcctccacagccaccatct 561
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>dbj|AK070710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062F08, full
           insert sequence
          Length = 1130

 Score =  492 bits (248), Expect = e-136
 Identities = 359/396 (90%), Gaps = 1/396 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   ccgccggcgagtctcctccgcatcgaccncatcgagctccgcttcccctttgagttgaag 62
           ||||||||||| |||||||||||||||| | |||| |||||||||||||| |||||||||
Sbjct: 167 ccgccggcgag-ctcctccgcatcgaccccgtcgaactccgcttccccttcgagttgaag 225

                                                                       
Query: 63  aagcagatctcgtgctcgatgcagctgtcgaatctcagcgacgactacatcgccttcaag 122
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 226 aagcagatctcgtgctcgatgcagctatcgaatctcagcgacgactacatcgccttcaag 285

                                                                       
Query: 123 gtgaaaactacaagcccaaagaaatactctgtgcggcccaacacaggggttgtcttgccg 182
           ||||||||||||||||||||||| || || |||||||| |||||||||||||||||||| 
Sbjct: 286 gtgaaaactacaagcccaaagaagtattcggtgcggcctaacacaggggttgtcttgcca 345

                                                                       
Query: 183 ntntctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatg 242
              ||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 346 cggtctacctgcgatgttgttgtgacaatgcaagcacagcgggaagccccgcctgacatg 405

                                                                       
Query: 243 cagtgcaaagataagttcctagtccagagcgtcgtcgcaccctctggcataaatgtgaag 302
           ||||||||||||||||||||||||||||||||| | ||||| || ||  ||| |||||||
Sbjct: 406 cagtgcaaagataagttcctagtccagagcgtcattgcaccttccggtgtaactgtgaag 465

                                                                       
Query: 303 gatgttacgggagagatgtttatgaaggaatctggaaataagattgaagaggtgaaattg 362
           ||| | |||||||| ||||||| |||||| || ||||||||| |||||||||| ||||||
Sbjct: 466 gatatcacgggagaaatgtttacgaaggagtccggaaataaggttgaagaggtaaaattg 525

                                               
Query: 363 cgagtcacctatgttgcacctncacagccaccatct 398
           ||||| |||||| |||| ||| ||||||||||||||
Sbjct: 526 cgagtgacctatattgctcctccacagccaccatct 561
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>gb|AY106385.1| Zea mays PCO066310 mRNA sequence
          Length = 1083

 Score =  389 bits (196), Expect = e-105
 Identities = 333/380 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  ctcctccgcatcgaccncatcgagctccgcttcccctttgagttgaagaagcagatctcg 74
           ||||| ||| |||||| | ||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 100 ctcctacgcgtcgaccccctcgagctacgcttccccttcgagttgaagaagcagatctcg 159

                                                                       
Query: 75  tgctcgatgcagctgtcgaatctcagcgacgactacatcgccttcaaggtgaaaactaca 134
           ||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 160 tgctccatgcagctgtcgaatcacaccgacgactacatcgccttcaaggtgaaaactaca 219

                                                                       
Query: 135 agcccaaagaaatactctgtgcggcccaacacaggggttgtcttgccgntntctacatgc 194
           || |||||||| || || ||||| |||||||| ||||||||||||||    ||||| || 
Sbjct: 220 agtccaaagaagtattcggtgcgacccaacactggggttgtcttgccacggtctacctgt 279

                                                                       
Query: 195 gatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcagtgcaaagat 254
           ||||||||||| || |||||||||||||| |||| ||| ||||||||||||||||| |||
Sbjct: 280 gatgttgttgttacgatgcaagcacagcgggaagccccgcctgacatgcagtgcaaggat 339

                                                                       
Query: 255 aagttcctagtccagagcgtcgtcgcaccctctggcataaatgtgaaggatgttacggga 314
           |||||||||||||| |||||||| || ||  |||| |||| |||||||||||| || || 
Sbjct: 340 aagttcctagtccaaagcgtcgttgcccctgctggtataactgtgaaggatgtcactggg 399

                                                                       
Query: 315 gagatgtttatgaaggaatctggaaataagattgaagaggtgaaattgcgagtcacctat 374
           || ||||||| |||||| |||||  ||||||| |||||||| ||||||||||| ||||||
Sbjct: 400 gatatgtttacgaaggagtctgggtataagatggaagaggtcaaattgcgagtgacctat 459

                               
Query: 375 gttgcacctncacagccacc 394
           ||||| ||| ||||||||||
Sbjct: 460 gttgctcctccacagccacc 479
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>gb|BT017878.1| Zea mays clone EL01N0513H07.c mRNA sequence
          Length = 766

 Score =  155 bits (78), Expect = 1e-34
 Identities = 140/161 (86%)
 Strand = Plus / Plus

                                                                       
Query: 234 cctgacatgcagtgcaaagataagttcctagtccagagcgtcgtcgcaccctctggcata 293
           ||||||||||||||||| ||||||||||||||||| |||||||| || ||  |||| |||
Sbjct: 14  cctgacatgcagtgcaaggataagttcctagtccaaagcgtcgttgcccctgctggtata 73

                                                                       
Query: 294 aatgtgaaggatgttacgggagagatgtttatgaaggaatctggaaataagattgaagag 353
           | |||||||||||| || || || ||||||| |||||| |||||  ||||||| ||||||
Sbjct: 74  actgtgaaggatgtcactggggatatgtttacgaaggagtctgggtataagatggaagag 133

                                                    
Query: 354 gtgaaattgcgagtcacctatgttgcacctncacagccacc 394
           || ||||||||||| ||||||||||| ||| ||||||||||
Sbjct: 134 gtcaaattgcgagtgacctatgttgctcctccacagccacc 174
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  133 bits (67), Expect = 5e-28
 Identities = 70/71 (98%)
 Strand = Plus / Minus

                                                                           
Query: 54      gagttgaagaagcagatctcgtgctcgatgcagctgtcgaatctcagcgacgactacatc 113
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3283186 gagttgaagaagcagatctcgtgctcgatgcagctatcgaatctcagcgacgactacatc 3283127

                          
Query: 114     gccttcaaggt 124
               |||||||||||
Sbjct: 3283126 gccttcaaggt 3283116



 Score =  129 bits (65), Expect = 7e-27
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                           
Query: 204     gtgacaatgcaagcacagcgagaagtcccacctgacatgcagtgcaaagataagttccta 263
               |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 3282127 gtgacaatgcaagcacagcgggaagccccgcctgacatgcagtgcaaagataagttccta 3282068

                                                                    
Query: 264     gtccagagcgtcgtcgcaccctctggcataaatgtgaaggatgttacgggaga 316
               |||||||||||| | ||||| || ||  ||| |||||||||| | ||||||||
Sbjct: 3282067 gtccagagcgtcattgcaccttccggtgtaactgtgaaggatatcacgggaga 3282015



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                           
Query: 121     aggtgaaaactacaagcccaaagaaatactctgtgcggcccaacacaggggttgtcttgc 180
               ||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||
Sbjct: 3282301 aggtgaaaactacaagcccaaagaagtattcggtgcggcctaacacaggggttgtcttgc 3282242

                                       
Query: 181     cgntntctacatgcgatgttgttg 204
               |    ||||| |||||||||||||
Sbjct: 3282241 cacggtctacctgcgatgttgttg 3282218



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                           
Query: 320     gtttatgaaggaatctggaaataagattgaagaggtgaaattgcgagtcacctatgttgc 379
               ||||| |||||| || ||||||||| |||||||||| ||||||||||| |||||| ||||
Sbjct: 3281830 gtttacgaaggagtccggaaataaggttgaagaggtaaaattgcgagtgacctatattgc 3281771

                                  
Query: 380     acctncacagccaccatct 398
                ||| ||||||||||||||
Sbjct: 3281770 tcctccacagccaccatct 3281752



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                                
Query: 3       ccgccggcgagtctcctccgcatcgaccncatcgagctccgcttcccct 51
               ||||||||||| |||||||||||||||| | |||| |||||||||||||
Sbjct: 3283365 ccgccggcgag-ctcctccgcatcgaccccgtcgaactccgcttcccct 3283318
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>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0438H08
          Length = 148626

 Score =  133 bits (67), Expect = 5e-28
 Identities = 70/71 (98%)
 Strand = Plus / Minus

                                                                         
Query: 54    gagttgaagaagcagatctcgtgctcgatgcagctgtcgaatctcagcgacgactacatc 113
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 60753 gagttgaagaagcagatctcgtgctcgatgcagctatcgaatctcagcgacgactacatc 60694

                        
Query: 114   gccttcaaggt 124
             |||||||||||
Sbjct: 60693 gccttcaaggt 60683



 Score =  129 bits (65), Expect = 7e-27
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                         
Query: 204   gtgacaatgcaagcacagcgagaagtcccacctgacatgcagtgcaaagataagttccta 263
             |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||
Sbjct: 59694 gtgacaatgcaagcacagcgggaagccccgcctgacatgcagtgcaaagataagttccta 59635

                                                                  
Query: 264   gtccagagcgtcgtcgcaccctctggcataaatgtgaaggatgttacgggaga 316
             |||||||||||| | ||||| || ||  ||| |||||||||| | ||||||||
Sbjct: 59634 gtccagagcgtcattgcaccttccggtgtaactgtgaaggatatcacgggaga 59582



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                         
Query: 121   aggtgaaaactacaagcccaaagaaatactctgtgcggcccaacacaggggttgtcttgc 180
             ||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||
Sbjct: 59868 aggtgaaaactacaagcccaaagaagtattcggtgcggcctaacacaggggttgtcttgc 59809

                                     
Query: 181   cgntntctacatgcgatgttgttg 204
             |    ||||| |||||||||||||
Sbjct: 59808 cacggtctacctgcgatgttgttg 59785



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 70/79 (88%)
 Strand = Plus / Minus

                                                                         
Query: 320   gtttatgaaggaatctggaaataagattgaagaggtgaaattgcgagtcacctatgttgc 379
             ||||| |||||| || ||||||||| |||||||||| ||||||||||| |||||| ||||
Sbjct: 59397 gtttacgaaggagtccggaaataaggttgaagaggtaaaattgcgagtgacctatattgc 59338

                                
Query: 380   acctncacagccaccatct 398
              ||| ||||||||||||||
Sbjct: 59337 tcctccacagccaccatct 59319



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/49 (91%), Gaps = 1/49 (2%)
 Strand = Plus / Minus

                                                              
Query: 3     ccgccggcgagtctcctccgcatcgaccncatcgagctccgcttcccct 51
             ||||||||||| |||||||||||||||| | |||| |||||||||||||
Sbjct: 60932 ccgccggcgag-ctcctccgcatcgaccccgtcgaactccgcttcccct 60885
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>dbj|AK071369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096L07, full
           insert sequence
          Length = 1296

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 96/117 (82%)
 Strand = Plus / Plus

                                                                       
Query: 34  tcgagctccgcttcccctttgagttgaagaagcagatctcgtgctcgatgcagctgtcga 93
           |||||||||| ||| |||| |||  ||||||||||||||| ||||| ||||||||| |||
Sbjct: 258 tcgagctccggttctccttcgagacgaagaagcagatctcatgctccatgcagctgacga 317

                                                                    
Query: 94  atctcagcgacgactacatcgccttcaaggtgaaaactacaagcccaaagaaatact 150
           |    |  || |||||||||||||| ||||| || || || ||||||||||| ||||
Sbjct: 318 acagaacagatgactacatcgcctttaaggtcaagacaactagcccaaagaagtact 374



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 237 gacatgcagtgcaaagataagttcctagtccagagcgt 274
           ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 461 gacatgcagtgcaaagacaagtttctagtgcagagcgt 498
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>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11,
             complete sequence
          Length = 113677

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 237   gacatgcagtgcaaagataagttcctagtccagagcgt 274
             ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 94836 gacatgcagtgcaaagacaagtttctagtgcagagcgt 94873



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 59    gaagaagcagatctcgtgctcgatgcagctgtcgaa 94
             ||||||||||||||| ||||| ||||||||| ||||
Sbjct: 94407 gaagaagcagatctcatgctccatgcagctgacgaa 94442
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 237      gacatgcagtgcaaagataagttcctagtccagagcgt 274
                ||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 26688359 gacatgcagtgcaaagacaagtttctagtgcagagcgt 26688322



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 59       gaagaagcagatctcgtgctcgatgcagctgtcgaa 94
                ||||||||||||||| ||||| ||||||||| ||||
Sbjct: 26688788 gaagaagcagatctcatgctccatgcagctgacgaa 26688753
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>ref|XM_473308.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1536

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 59   gaagaagcagatctcgtgctcgatgcagctgtcgaa 94
            ||||||||||||||| ||||| ||||||||| ||||
Sbjct: 1083 gaagaagcagatctcatgctccatgcagctgacgaa 1118
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>emb|AJ251365.1|NPL251365 Nicotiana plumbaginifolia mRNA for VAP27
          Length = 1241

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 48  ccctttgagttgaagaagcagatctcgtgctc 79
           |||||||| ||||||||||||||||| |||||
Sbjct: 91  ccctttgaattgaagaagcagatctcatgctc 122
to top
>ref|NM_115924.2| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN
           27-1); structural molecule AT3G60600 (VAP27-1)
           transcript variant AT3G60600.1 mRNA, complete cds
          Length = 1204

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 233 ttcccttttgaattgaagaagcagatctcttgctc 267
to top
>ref|NM_001035826.1| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN
           27-1); structural molecule AT3G60600 (VAP27-1)
           transcript variant AT3G60600.2 mRNA, complete cds
          Length = 1545

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 236 ttcccttttgaattgaagaagcagatctcttgctc 270
to top
>ref|NM_001035827.1| Arabidopsis thaliana VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN
           27-1); structural molecule AT3G60600 (VAP27-1)
           transcript variant AT3G60600.3 mRNA, complete cds
          Length = 1565

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 236 ttcccttttgaattgaagaagcagatctcttgctc 270
to top
>ref|XM_473446.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 735

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 117 ttcaaggtgaaaactacaagcccaaagaaatactctgtgcggc 159
           |||||||||||||| || | ||||| ||| |||||||||||||
Sbjct: 115 ttcaaggtgaaaacgacgaacccaaggaagtactctgtgcggc 157
to top
>gb|BT013294.1| Lycopersicon esculentum clone 134912R, mRNA sequence
          Length = 1079

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 48  ccctttgagttgaagaagcagatctcgtgctcgat 82
           ||||| |||||||||||||||||||  ||||||||
Sbjct: 149 cccttcgagttgaagaagcagatctattgctcgat 183
to top
>gb|AY364005.1| Arabidopsis thaliana VAP27-1 (VAP27-1) mRNA, complete cds
          Length = 854

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 110 ttcccttttgaattgaagaagcagatctcttgctc 144
to top
>gb|AY065144.1| Arabidopsis thaliana putative protein (At3g60600; T4C21_10) mRNA,
           complete cds
          Length = 1107

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 232 ttcccttttgaattgaagaagcagatctcttgctc 266
to top
>gb|BT006297.1| Arabidopsis thaliana At3g60600 mRNA, complete cds
          Length = 771

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 94  ttcccttttgaattgaagaagcagatctcttgctc 128
to top
>emb|BX824022.1|CNS0A5M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH15ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1070

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 224 ttcccttttgaattgaagaagcagatctcttgctc 258
to top
>emb|BX822165.1|CNS0A5U3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB17ZC06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1456

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 223 ttcccttttgaattgaagaagcagatctcttgctc 257
to top
>emb|BX824970.1|CNS0A5JC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZD12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1394

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 220 ttcccttttgaattgaagaagcagatctcttgctc 254
to top
>gb|AY085922.1| Arabidopsis thaliana clone 19714 mRNA, complete sequence
          Length = 1116

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||| ||||||||||||||||| |||||
Sbjct: 233 ttcccttttgaattgaagaagcagatctcttgctc 267
to top
>dbj|AK066540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070M12, full
           insert sequence
          Length = 1761

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 117 ttcaaggtgaaaactacaagcccaaagaaatactctgtgcggc 159
           |||||||||||||| || | ||||| ||| |||||||||||||
Sbjct: 239 ttcaaggtgaaaacgacgaacccaaggaagtactctgtgcggc 281
to top
>dbj|AK060752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G08, full
           insert sequence
          Length = 1014

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 117 ttcaaggtgaaaactacaagcccaaagaaatactctgtgcggc 159
           |||||||||||||| || | ||||| ||| |||||||||||||
Sbjct: 154 ttcaaggtgaaaacgacgaacccaaggaagtactctgtgcggc 196
to top
>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence
          Length = 104878

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 234   cctgacatgcagtgcaaagataagtt 259
             ||||||||||| ||||||||||||||
Sbjct: 59573 cctgacatgcaatgcaaagataagtt 59548
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 102     gacgactacatcgccttcaagg 123
               ||||||||||||||||||||||
Sbjct: 3342795 gacgactacatcgccttcaagg 3342816
to top
>gb|DQ442658.1| Solanum chacoense VAP25 (VAP25) mRNA, complete cds
          Length = 980

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 49  cctttgagttgaagaagcagatctcgtgctcgat 82
           |||| |||||||||||||||||||  ||||||||
Sbjct: 91  ccttcgagttgaagaagcagatctgttgctcgat 124
to top
>ref|NM_130077.2| Arabidopsis thaliana structural molecule AT2G45140 mRNA, complete
           cds
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 266 ttcccttttgaattgaagaagcagatctc 294
to top
>ref|NM_116234.2| Arabidopsis thaliana structural molecule AT4G00170 mRNA, complete
           cds
          Length = 1072

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctcgatgca 85
           |||||||||||||||||||| || |  ||||| ||||||||
Sbjct: 157 ttcccctttgagttgaagaaacaaagttcgtgttcgatgca 197
to top
>ref|XM_480160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1236

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 186 tctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcag 245
           |||||||| ||||||   ||||| |||||||||||| | || |  || || || ||||||
Sbjct: 450 tctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcag 509

                            
Query: 246 tgcaaagataagttcct 262
           ||||| |||||||||||
Sbjct: 510 tgcaaggataagttcct 526
to top
>ref|XM_507135.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1177_E11.5 mRNA
          Length = 1327

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 186 tctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcag 245
           |||||||| ||||||   ||||| |||||||||||| | || |  || || || ||||||
Sbjct: 450 tctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcag 509

                            
Query: 246 tgcaaagataagttcct 262
           ||||| |||||||||||
Sbjct: 510 tgcaaggataagttcct 526
to top
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence
          Length = 130194

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 52    ttgagttgaagaagcagatctcgtg 76
             ||||| |||||||||||||||||||
Sbjct: 75475 ttgagctgaagaagcagatctcgtg 75499
to top
>gb|AY050901.1| Arabidopsis thaliana At4g00170 mRNA sequence
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctcgatgca 85
           |||||||||||||||||||| || |  ||||| ||||||||
Sbjct: 145 ttcccctttgagttgaagaaacaaagttcgtgttcgatgca 185
to top
>gb|AY093014.1| Arabidopsis thaliana putative VAMP-associated protein (At2g45140)
           mRNA, complete cds
          Length = 1261

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 266 ttcccttttgaattgaagaagcagatctc 294
to top
>gb|BT006283.1| Arabidopsis thaliana At2g45140 mRNA, complete cds
          Length = 720

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 45 ttcccctttgagttgaagaagcagatctc 73
          ||||| ||||| |||||||||||||||||
Sbjct: 43 ttcccttttgaattgaagaagcagatctc 71
to top
>emb|BX818981.1|CNS0A8RZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZG06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1128

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 183 ttcccttttgaattgaagaagcagatctc 211
to top
>emb|BX821072.1|CNS0A8CY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZD06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1077

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 188 ttcccttttgaattgaagaagcagatctc 216
to top
>emb|BX821071.1|CNS0A8CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZC08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 188 ttcccttttgaattgaagaagcagatctc 216
to top
>emb|BX822166.1|CNS0A5U4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB17ZC07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1448

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 51  tttgagttgaagaagcagatctcgtgctc 79
           ||||| ||||||||||||||||| |||||
Sbjct: 229 tttgaattgaagaagcagatctcttgctc 257
to top
>emb|BX826486.1|CNS0A46O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB2ZH02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1059

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctcgatgca 85
           |||||||||||||||||||| || |  ||||| ||||||||
Sbjct: 157 ttcccctttgagttgaagaaacaaagttcgtgttcgatgca 197
to top
>emb|BX842101.1|CNS09Y9V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZG07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1024

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 149 ttcccttttgaattgaagaagcagatctc 177
to top
>gb|AY088399.1| Arabidopsis thaliana clone 6457 mRNA, complete sequence
          Length = 1134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 45  ttcccctttgagttgaagaagcagatctc 73
           ||||| ||||| |||||||||||||||||
Sbjct: 205 ttcccttttgaattgaagaagcagatctc 233
to top
>gb|AY087270.1| Arabidopsis thaliana clone 33482 mRNA, complete sequence
          Length = 1058

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 45  ttcccctttgagttgaagaagcagatctcgtgctcgatgca 85
           |||||||||||||||||||| || |  ||||| ||||||||
Sbjct: 143 ttcccctttgagttgaagaaacaaagttcgtgttcgatgca 183
to top
>dbj|AK104886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A07, full
           insert sequence
          Length = 1240

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 186 tctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcag 245
           |||||||| ||||||   ||||| |||||||||||| | || |  || || || ||||||
Sbjct: 450 tctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcag 509

                            
Query: 246 tgcaaagataagttcct 262
           ||||| |||||||||||
Sbjct: 510 tgcaaggataagttcct 526
to top
>dbj|AK069865.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037M15, full
           insert sequence
          Length = 1329

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 186 tctacatgcgatgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcag 245
           |||||||| ||||||   ||||| |||||||||||| | || |  || || || ||||||
Sbjct: 450 tctacatgtgatgttacagtgacgatgcaagcacagagggaggcacctccggatatgcag 509

                            
Query: 246 tgcaaagataagttcct 262
           ||||| |||||||||||
Sbjct: 510 tgcaaggataagttcct 526
to top
>gb|BT001917.1| Arabidopsis thaliana clone C105174 putative proline-rich protein
          (At4g00170) mRNA, complete cds
          Length = 751

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 45 ttcccctttgagttgaagaagcagatctcgtgctcgatgca 85
          |||||||||||||||||||| || |  ||||| ||||||||
Sbjct: 46 ttcccctttgagttgaagaaacaaagttcgtgttcgatgca 86
to top
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome
          Length = 1138011

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 49     cctttgagttgaagaagcaga 69
              |||||||||||||||||||||
Sbjct: 853565 cctttgagttgaagaagcaga 853585
to top
>ref|XM_467003.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 196 atgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcagtgcaaagata 255
           ||||| |||| ||||||||||| ||||| || |  ||||| |||||||| ||||| || |
Sbjct: 333 atgttcttgtaacaatgcaagctcagcgggaggcgccaccggacatgcaatgcaaggaca 392

                           
Query: 256 agttcctagtccagag 271
           | ||||| || |||||
Sbjct: 393 aattccttgtgcagag 408
to top
>emb|AL138646.2|ATT8B10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8B10
          Length = 103787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 52     ttgagttgaagaagcagatctcgtgctc 79
              |||| ||||||||||||||||| |||||
Sbjct: 102271 ttgaattgaagaagcagatctcttgctc 102298
to top
>gb|AC104509.6| Drosophila melanogaster X BAC RP98-20K1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 153604

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     gcgagtctcctccgcatcga 28
             ||||||||||||||||||||
Sbjct: 29170 gcgagtctcctccgcatcga 29151
to top
>dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, map 22, complete
              sequences
          Length = 223409

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tttgagttgaagaagcagat 70
              ||||||||||||||||||||
Sbjct: 121315 tttgagttgaagaagcagat 121296
to top
>dbj|AK073818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O06, full
           insert sequence
          Length = 1112

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                       
Query: 196 atgttgttgtgacaatgcaagcacagcgagaagtcccacctgacatgcagtgcaaagata 255
           ||||| |||| ||||||||||| ||||| || |  ||||| |||||||| ||||| || |
Sbjct: 332 atgttcttgtaacaatgcaagctcagcgggaggcgccaccggacatgcaatgcaaggaca 391

                           
Query: 256 agttcctagtccagag 271
           | ||||| || |||||
Sbjct: 392 aattccttgtgcagag 407
to top
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete
              sequence
          Length = 342195

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      gcgagtctcctccgcatcga 28
              ||||||||||||||||||||
Sbjct: 197256 gcgagtctcctccgcatcga 197237
to top
>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tttgagttgaagaagcagat 70
              ||||||||||||||||||||
Sbjct: 218132 tttgagttgaagaagcagat 218113
to top
>emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on chromosome 12, complete
              sequence
          Length = 203697

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     ctttgagttgaagaagcagatctc 73
              ||||||||||||||| ||||||||
Sbjct: 135367 ctttgagttgaagaaccagatctc 135390
to top
>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21
          Length = 107865

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 52   ttgagttgaagaagcagatctcgtgctc 79
            |||| ||||||||||||||||| |||||
Sbjct: 1982 ttgaattgaagaagcagatctcttgctc 2009
to top
>dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821P16,
              LL56-APP region, complete sequence
          Length = 185300

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tttgagttgaagaagcagat 70
              ||||||||||||||||||||
Sbjct: 149676 tttgagttgaagaagcagat 149657


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,728,544
Number of Sequences: 3902068
Number of extensions: 2728544
Number of successful extensions: 47414
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 47277
Number of HSP's gapped (non-prelim): 137
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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