ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5f05 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 130 bits (326), Expect = 4e-30 Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Frame = +2 Query: 47 DSKAVCPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLY 226 + + +C +L+ V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ Sbjct: 102 EKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLW 160 Query: 227 RHIIFDILYNNDRVIEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRME 397 H+ F + ++ DR+I NV +L L D+ + + Y+V+W ET Sbjct: 161 THLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRR 220 Query: 398 KYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXXX 577 + P LE+HW SIINS V V LL GF+A ILMRVL+ND +Y Sbjct: 221 RADDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSS 280 Query: 578 -------SGWKYIHGDVFRFP 619 +GWK IH DVFRFP Sbjct: 281 DDFDQGDNGWKIIHTDVFRFP 301
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 129 bits (325), Expect = 5e-30 Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Frame = +2 Query: 47 DSKAVCPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLY 226 + + +C +L+ V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ Sbjct: 102 EKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLW 160 Query: 227 RHIIFDILYNNDRVIEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRME 397 H+ F + ++ DR+I NV +L L D+ + + Y+V+W ET Sbjct: 161 THLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRR 220 Query: 398 KYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXXX 577 + P LE+HW SIINS V V LL GF+A ILMRVL+ND +Y Sbjct: 221 RGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSS 280 Query: 578 -------SGWKYIHGDVFRFP 619 +GWK IH DVFRFP Sbjct: 281 DDFDQGDNGWKIIHTDVFRFP 301
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 128 bits (322), Expect = 1e-29 Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Frame = +2 Query: 47 DSKAVCPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLY 226 + + +C +L+ V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ Sbjct: 102 EKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLW 160 Query: 227 RHIIFDILYNNDRVIEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRME 397 H+ F + ++ DR+I NV +L L D+ + + Y+V+W ET Sbjct: 161 THLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEFLGLTHTYSVRWSETSVERRSDRR 220 Query: 398 KYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXX- 574 + P LE+HW SIINS V V LL GF+A ILMRVL+ND +Y Sbjct: 221 RGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSG 280 Query: 575 ------XSGWKYIHGDVFRFP 619 +GWK IH DVFRFP Sbjct: 281 DDFDQGDNGWKIIHTDVFRFP 301
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 127 bits (318), Expect = 3e-29 Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 10/201 (4%) Frame = +2 Query: 47 DSKAVCPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLY 226 + + +C +L+ V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ Sbjct: 102 EKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLW 160 Query: 227 RHIIFDILYNNDRVIEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRME 397 H+ F + + DR+I NV +L L D+ + + Y+V+W ET Sbjct: 161 THLDFHLEFRGDRIIFANVSVRDVKPHSLDGLRPDEFLGLTHAYSVRWSETSVERRSDRR 220 Query: 398 KYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXX- 574 P LE+HW SIINS V V LL GF+A ILMRVL+ND +Y Sbjct: 221 HGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSG 280 Query: 575 ------XSGWKYIHGDVFRFP 619 +GWK IH DVFRFP Sbjct: 281 DDFDQGDNGWKIIHTDVFRFP 301
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 124 bits (310), Expect = 3e-28 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 4/188 (2%) Frame = +2 Query: 62 CPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIF 241 C L KE F A+ Y++QMY DDLP+WG +G+ ++ G+ YYL+ + Sbjct: 106 CEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGE------DYYLWTYKKL 159 Query: 242 DILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNM 421 +I +N +R++++N+ ++ V L + ++ + Y+VKWK++ FE R +KY S Sbjct: 160 EIGFNGNRIVDVNLTSE--GKVKLVPNTKIQMS--YSVKWKKSDVKFEDRFDKYLDPSFF 215 Query: 422 PHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYX----XXXXXXXXXXXSGWK 589 H +HWFSI NS + V+ L G ++ ILMR L+ D+ +Y GWK Sbjct: 216 QH--RIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWK 273 Query: 590 YIHGDVFR 613 +HGDVFR Sbjct: 274 QVHGDVFR 281
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 124 bits (310), Expect = 3e-28 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 4/188 (2%) Frame = +2 Query: 62 CPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIF 241 C L KE F A+ Y++QMY DDLP+WG +G+ ++ G+ YYL+ + Sbjct: 108 CEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEADENGE------DYYLWTYKKL 161 Query: 242 DILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNM 421 +I +N +R++++N+ ++ V L + ++ + Y+VKWK++ FE R +KY S Sbjct: 162 EIGFNGNRIVDVNLTSE--GKVKLVPNTKIQMS--YSVKWKKSDVKFEDRFDKYLDPSFF 217 Query: 422 PHHLEVHWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYX----XXXXXXXXXXXSGWK 589 H +HWFSI NS + V+ L G ++ ILMR L+ D+ +Y GWK Sbjct: 218 QH--RIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWK 275 Query: 590 YIHGDVFR 613 +HGDVFR Sbjct: 276 QVHGDVFR 283
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 88.6 bits (218), Expect = 1e-17 Identities = 63/234 (26%), Positives = 94/234 (40%), Gaps = 48/234 (20%) Frame = +2 Query: 65 PKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEW----------- 211 P LT E + +DYY + D+LP+ + D + Sbjct: 93 PVTLTVEQSRLVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEHGYRL 152 Query: 212 ------KYYLYRHIIFDILYNND----------RVIEINVHTDQSALVDLTED------- 322 K YL+ H+ F + Y+ + RV+ V L DL D Sbjct: 153 GFTDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTL 212 Query: 323 --------------KEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIIN 460 KE + F Y+V W+E+ + R + Y + S+ +++HWFSIIN Sbjct: 213 PEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSD----VQIHWFSIIN 268 Query: 461 SCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 622 S V V L+G L+ I++R L+ D Y SGWK +HGDVFR P+ Sbjct: 269 SVVVVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQ 322
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 69.7 bits (169), Expect = 7e-12 Identities = 38/103 (36%), Positives = 54/103 (52%) Frame = +2 Query: 311 LTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTG 490 L E + V F Y+VK+ E+ T + R +KY + + WFS+IN + V+LL+ Sbjct: 265 LDEGNDNEVYFTYSVKFNESATSWATRWDKYLHV----YDPSIQWFSLINFSLVVVLLSS 320 Query: 491 FLATILMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFP 619 + L+R LK+DF +Y SGWK HGDVFR P Sbjct: 321 VVIHSLLRALKSDFARYNELNLDDDFQEDSGWKLNHGDVFRSP 363
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 66.2 bits (160), Expect = 7e-11 Identities = 34/99 (34%), Positives = 51/99 (51%) Frame = +2 Query: 326 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 505 E+ + + Y++ ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSISFEEEKNIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 506 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 622 ++R L D +Y GWK +HGD+FR P+ Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPR 360
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 66.2 bits (160), Expect = 7e-11 Identities = 35/99 (35%), Positives = 51/99 (51%) Frame = +2 Query: 326 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 505 E+ + + Y+V ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSVSFEEDKKIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 506 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 622 ++R L D +Y GWK +HGD+FR P+ Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPR 360
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 66.2 bits (160), Expect = 7e-11 Identities = 34/99 (34%), Positives = 51/99 (51%) Frame = +2 Query: 326 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 505 E+ + + Y++ ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 263 EIKIAYTYSISFEEEKNIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 320 Query: 506 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 622 ++R L D +Y GWK +HGD+FR P+ Sbjct: 321 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPR 359
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 66.2 bits (160), Expect = 7e-11 Identities = 35/99 (35%), Positives = 51/99 (51%) Frame = +2 Query: 326 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 505 E+ + + Y+V ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSVSFEEDDKIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 506 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 622 ++R L D +Y GWK +HGD+FR P+ Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPR 360
>BLE1_PSEAE (P37321) Extended-spectrum beta-lactamase PER-1 precursor (EC| 3.5.2.6) Length = 308 Score = 36.2 bits (82), Expect = 0.080 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -1 Query: 397 LHPLLERGRCLLPLDSVKEVHINLLVLRQVNQGTLVSVHIDLNNTVVI 254 L PLL P+ SV ++H+ +LVL QV+QG L DLN TV++ Sbjct: 56 LEPLLINPFEKFPMQSVFKLHLAMLVLHQVDQGKL-----DLNQTVIV 98
>HAT1_ASPOR (Q2UEX1) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 511 Score = 32.3 bits (72), Expect = 1.2 Identities = 22/83 (26%), Positives = 36/83 (43%) Frame = +2 Query: 176 VEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTV 355 V+K DP+E +YY +R ++ L+ R +I + + S ++ E+ NV+ Y Sbjct: 384 VKKYNATDPNERRYYWWRMLVKQRLFKRSR--DILIQLEMSDRIEKLEETVTNVEEGYEA 441 Query: 356 KWKETPTPFEKRMEKYSSSSNMP 424 K E M K S P Sbjct: 442 LIKVFTAREEALMAKQEESGESP 464
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 32.0 bits (71), Expect = 1.5 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Frame = +2 Query: 266 VIEINVHTDQSALVDLTEDKEVNVDFLYTV-KWKETPTPFEKRMEKYSSSSNMPH--HLE 436 V+ +H D++ L EV D Y++ TPTPF+ +EKY +P HLE Sbjct: 487 VVTTPLHRDKTPLHQKYPSSEVLPDQKYSMDNTPHTPTPFKNALEKYGPLKPLPQTPHLE 546 Query: 437 VHWFSIINS 463 ++ S Sbjct: 547 EDLKEVLRS 555
>DPOL_ADEG1 (Q64751) DNA polymerase (EC 2.7.7.7)| Length = 1121 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 4/80 (5%) Frame = +2 Query: 20 QXLISARXHDSKAVCPKKLTKEDVAKFRNAVAK----DYYFQMYYDDLPLWGFIGKVEKG 187 Q S + +A CP + + K R K DY ++Y P++ +I + +G Sbjct: 431 QLTFSNYVREQRATCPPSVPEPPKKKGRTKKKKQPSPDYVAEVYAPHRPMFKYIRQALRG 490 Query: 188 GKPDPSEWKYYLYRHIIFDI 247 G+ P+ YL +FDI Sbjct: 491 GRCYPNVLGPYLKPVYVFDI 510
>SSK22_YEAST (P25390) Serine/threonine-protein kinase SSK22 (EC 2.7.11.1) (MAP| kinase kinase kinase SSK22) (Suppressor of sensor kinase 22) Length = 1331 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = +1 Query: 385 EEDGEVFQLLQHAASLGGSLVLH-YKFLCYGPPPHRVPGNNPHASSE 522 E++ EVF+L +SLG +VL+ + + + P +++PGNN AS+E Sbjct: 713 EKNNEVFELEVALSSLGALVVLYPGEPVVWDGPVYKLPGNNLFASNE 759
>HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 570 Score = 31.2 bits (69), Expect = 2.6 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = +2 Query: 176 VEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTV 355 ++K DP+E +YY +R + LY + I I + D+ + E+ NV+ Y V Sbjct: 447 IKKHRAEDPNERRYYWWRMLTKQRLYKRSKDILIQLDLDER--IQKLEETVSNVEEGYEV 504 Query: 356 KWKETPTPFEKRMEK 400 KE F +R EK Sbjct: 505 LLKE----FSEREEK 515
>THRB_BOVIN (P00735) Prothrombin precursor (EC 3.4.21.5) (Coagulation factor| II) [Contains: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain] Length = 625 Score = 30.4 bits (67), Expect = 4.4 Identities = 23/94 (24%), Positives = 41/94 (43%) Frame = +2 Query: 203 SEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPF 382 S W+ L+R ++L + + V T L+ DK VD L K + T + Sbjct: 378 SPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRY 437 Query: 383 EKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLL 484 E+++EK S + H +W ++ + +L L Sbjct: 438 ERKVEKISMLDKIYIHPRYNWKENLDRDIALLKL 471
>LDLR2_XENLA (Q99088) Low-density lipoprotein receptor 2 precursor (LDL receptor| 2) Length = 892 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 Query: 68 KKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGG 190 K L +D+AK R+ V MY+ D WG K+EKGG Sbjct: 507 KTLFTDDLAKPRDIVVDPSQGFMYWTD---WGLPAKIEKGG 544
>LDLR_HUMAN (P01130) Low-density lipoprotein receptor precursor (LDL receptor)| Length = 860 Score = 30.0 bits (66), Expect = 5.7 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +2 Query: 47 DSKAVCPKKLTKEDVAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGG 190 D+K V K L +E+ +K R V + MY+ D WG K++KGG Sbjct: 502 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD---WGTPAKIKKGG 546
>IF2_BUCBP (Q89AF5) Translation initiation factor IF-2| Length = 876 Score = 30.0 bits (66), Expect = 5.7 Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 6/104 (5%) Frame = -1 Query: 469 NTRIYNGEPMNLQVMRHVGGAGILLHPLLERGRCLLPLDSVKEVHINL--LVLRQVNQGT 296 N + E + L+ + + +G+++ L++GR + +KE +N +VL G Sbjct: 535 NAILTQSEMLELKSISNGMASGLVIESYLDKGRGPTAIILIKEGKLNKGDIVLCGFEYGK 594 Query: 295 LVSVHIDLNNTVVIVEDVKDNVPVEVI----LPLARVRLASLLD 176 + S+ DL N V + ++PV+++ +PLA ++ + D Sbjct: 595 VRSIRDDLENE---VNSIGPSIPVKILGLSGIPLAGDKIVVVRD 635
>MET10_YEAST (P39692) Sulfite reductase [NADPH] flavoprotein component (EC| 1.8.1.2) Length = 1035 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%) Frame = +2 Query: 110 VAKDYYFQMYYD-------DLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDI 247 +AK F+ Y+ DLP+ F+ KV++ + P+++ Y++ HI FDI Sbjct: 626 IAKKLSFKEAYEVENKLRPDLPVKNFVVKVKENRRVTPADYDRYIF-HIEFDI 677
>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like proteinase (EC 3.4 Length = 6758 Score = 29.3 bits (64), Expect = 9.8 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 Query: 86 DVAKFRNAVAKDYYFQMYYDDLPLWGFIGKV 178 D F++A+ DY + Y D+ WG++G + Sbjct: 5814 DYCCFKHALGCDYVYNPYVIDIQQWGYVGSL 5844
>ENPL_HORVU (P36183) Endoplasmin homolog precursor (GRP94 homolog)| Length = 809 Score = 29.3 bits (64), Expect = 9.8 Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 3/30 (10%) Frame = +2 Query: 44 HDSKAV---CPKKLTKEDVAKFRNAVAKDY 124 +D KAV PK++T+E+ AKF +++AKD+ Sbjct: 340 NDMKAVWLRSPKEVTEEEYAKFYHSLAKDF 369 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,697,053 Number of Sequences: 219361 Number of extensions: 1727210 Number of successful extensions: 5210 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 5003 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5193 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
