ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5f04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 813 bits (410), Expect = 0.0 Identities = 572/626 (91%) Strand = Plus / Plus Query: 11 ggaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 70 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1509 ggaaatggaattgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 1568 Query: 71 agcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacat 130 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||| || || Sbjct: 1569 agcagagactgaatccggtgaagtcggtccccttgttactgaggcagatattcagcatat 1628 Query: 131 cgtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcct 190 ||| || || |||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 1629 cgtgtcctcttggactggaatacctgtggagaaagtctcatctgatgagtctgaccgtct 1688 Query: 191 ccttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagc 250 |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 1689 ccttaagatggaggagacactccatacgcgtatcattggtcaggatgaggctgtcaaagc 1748 Query: 251 tattagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgc 310 |||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 1749 tattagccgtgccatccgccgtgctcgtgttggcctcaagaacccaaatcggcctattgc 1808 Query: 311 tagcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggc 370 ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 1809 tagcttcatcttctctggaccaactggtgtcggtaaatcagagttagcaaaggctcttgc 1868 Query: 371 atcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatgga 430 | |||||||||| |||||||| || |||||||||||| |||| |||||||| |||||||| Sbjct: 1869 agcctactactttggctcagaagaggccatgatcagactagacatgagtgagttcatgga 1928 Query: 431 gagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggg 490 ||| |||||||| ||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 1929 gaggcatacagtctccaagctcattggatcacctccaggttatgttggttacactgaggg 1988 Query: 491 aggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagat 550 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 1989 tggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcgatgagat 2048 Query: 551 tgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggct 610 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 2049 tgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatggaagact 2108 Query: 611 gacagatagcaagggacggacagttg 636 || || |||||||| ||||| |||| Sbjct: 2109 aactgacagcaagggtcggactgttg 2134
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 813 bits (410), Expect = 0.0 Identities = 572/626 (91%) Strand = Plus / Minus Query: 11 ggaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 70 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19611528 ggaaatggaattgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 19611469 Query: 71 agcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacat 130 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||| || || Sbjct: 19611468 agcagagactgaatccggtgaagtcggtccccttgttactgaggcagatattcagcatat 19611409 Query: 131 cgtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcct 190 ||| || || |||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 19611408 cgtgtcctcttggactggaatacctgtggagaaagtctcatctgatgagtctgaccgtct 19611349 Query: 191 ccttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagc 250 |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 19611348 ccttaagatggaggagacactccatacgcgtatcattggtcaggatgaggctgtcaaagc 19611289 Query: 251 tattagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgc 310 |||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 19611288 tattagccgtgccatccgccgtgctcgtgttggcctcaagaacccaaatcggcctattgc 19611229 Query: 311 tagcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggc 370 ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 19611228 tagcttcatcttctctggaccaactggtgtcggtaaatcagagttagcaaaggctcttgc 19611169 Query: 371 atcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatgga 430 | |||||||||| |||||||| || |||||||||||| |||| |||||||| |||||||| Sbjct: 19611168 agcctactactttggctcagaagaggccatgatcagactagacatgagtgagttcatgga 19611109 Query: 431 gagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggg 490 ||| |||||||| ||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 19611108 gaggcatacagtctccaagctcattggatcacctccaggttatgttggttacactgaggg 19611049 Query: 491 aggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagat 550 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 19611048 tggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcgatgagat 19610989 Query: 551 tgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggct 610 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 19610988 tgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatggaagact 19610929 Query: 611 gacagatagcaagggacggacagttg 636 || || |||||||| ||||| |||| Sbjct: 19610928 aactgacagcaagggtcggactgttg 19610903
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 813 bits (410), Expect = 0.0 Identities = 572/626 (91%) Strand = Plus / Minus Query: 11 ggaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 70 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62254 ggaaatggaattgaaggcccaaattacagccattattgacaagagcaaggaaatggttaa 62195 Query: 71 agcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacat 130 |||||||||||||||||| ||||| ||||| ||||| || |||||||||||||| || || Sbjct: 62194 agcagagactgaatccggtgaagtcggtccccttgttactgaggcagatattcagcatat 62135 Query: 131 cgtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcct 190 ||| || || |||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct: 62134 cgtgtcctcttggactggaatacctgtggagaaagtctcatctgatgagtctgaccgtct 62075 Query: 191 ccttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagc 250 |||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 62074 ccttaagatggaggagacactccatacgcgtatcattggtcaggatgaggctgtcaaagc 62015 Query: 251 tattagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgc 310 |||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct: 62014 tattagccgtgccatccgccgtgctcgtgttggcctcaagaacccaaatcggcctattgc 61955 Query: 311 tagcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggc 370 ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 61954 tagcttcatcttctctggaccaactggtgtcggtaaatcagagttagcaaaggctcttgc 61895 Query: 371 atcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatgga 430 | |||||||||| |||||||| || |||||||||||| |||| |||||||| |||||||| Sbjct: 61894 agcctactactttggctcagaagaggccatgatcagactagacatgagtgagttcatgga 61835 Query: 431 gagacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggg 490 ||| |||||||| ||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct: 61834 gaggcatacagtctccaagctcattggatcacctccaggttatgttggttacactgaggg 61775 Query: 491 aggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagat 550 |||||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 61774 tggtcaactgacagaagcagttcgccgccgaccatacactgttgttctcttcgatgagat 61715 Query: 551 tgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggct 610 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || Sbjct: 61714 tgaaaaggcacatcctgatgtcttcaacatgatgcttcagatcttagaagatggaagact 61655 Query: 611 gacagatagcaagggacggacagttg 636 || || |||||||| ||||| |||| Sbjct: 61654 aactgacagcaagggtcggactgttg 61629
>dbj|AK058510.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G07, full insert sequence Length = 1527 Score = 807 bits (407), Expect = 0.0 Identities = 563/615 (91%) Strand = Plus / Plus Query: 22 tgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaagcagagactg 81 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 tgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaagcagagactg 129 Query: 82 aatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatcgtctcatcat 141 ||||||| ||||| ||||| ||||| || |||||||||||||| || ||||| || || | Sbjct: 130 aatccggtgaagtcggtccccttgttactgaggcagatattcagcatatcgtgtcctctt 189 Query: 142 ggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctccttaagatgg 201 ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 190 ggactggaatacctgtggagaaagtctcatctgatgagtctgaccgtctccttaagatgg 249 Query: 202 aagagacactccatacacgtatcattgggcaggatgaagctgtcaaagctattagccgtg 261 | |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 250 aggagacactccatacgcgtatcattggtcaggatgaggctgtcaaagctattagccgtg 309 Query: 262 ctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagcttcatat 321 | ||||||||||||||||||||||||||||| |||||||| || |||||||||||||| | Sbjct: 310 ccatccgccgtgctcgtgttggcctcaagaacccaaatcggcctattgctagcttcatct 369 Query: 322 tctctggaccaactggtgttggtaaatcagaattagcaaaggctctggcatcctactact 381 ||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||| Sbjct: 370 tctctggaccaactggtgtcggtaaatcagagttagcaaaggctcttgcagcctactact 429 Query: 382 tcggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacag 441 | |||||||| || |||||||||||| |||| |||||||| ||||||||||| ||||||| Sbjct: 430 ttggctcagaagaggccatgatcagactagacatgagtgagttcatggagaggcatacag 489 Query: 442 tgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggtcaactaa 501 | ||||| || || ||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct: 490 tctccaagctcattggatcacctccaggttatgttggttacactgagggtggtcaactga 549 Query: 502 cagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcac 561 ||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct: 550 cagaagcagttcgccgccgaccatacactgttgttctcttcgatgagattgaaaaggcac 609 Query: 562 atccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgacagatagca 621 |||| |||||||||||||||||||||||||||||||||||||| || || || || |||| Sbjct: 610 atcctgatgtcttcaacatgatgcttcagatcttagaagatggaagactaactgacagca 669 Query: 622 agggacggacagttg 636 |||| ||||| |||| Sbjct: 670 agggtcggactgttg 684
>gb|AY103877.1| Zea mays PCO122935 mRNA sequence Length = 1798 Score = 607 bits (306), Expect = e-170 Identities = 480/538 (89%) Strand = Plus / Plus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1261 gaaatggagcttaaggctcaaattacagccattattgacaagagcaaggaaatgattaaa 1320 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || ||||| ||||| ||||| || |||||||| |||||||| || Sbjct: 1321 gcagagactgaatctggtgaagtcggtccgcttgttactgaggcagacattcaacatatt 1380 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 ||||| || |||||||| || |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1381 gtctcctcttggactggaattcctgtggagaaagtgtcatcggatgagtctgaccgcctc 1440 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 || |||||||||||||| || ||||||||||||||||| |||||||| |||||||||||| Sbjct: 1441 ctaaagatggaagagacgctgcatacacgtatcattggacaggatgaggctgtcaaagct 1500 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 |||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 1501 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaataggccaattgcc 1560 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||||||||||||||| ||||| ||||| |||||||| | |||||||| ||||| Sbjct: 1561 agcttcatattctctggaccgactggagttggcaaatcagagcttgcaaaggccctggcg 1620 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 |||||||||| ||||| ||||| || |||||||| | || |||||||| ||||||||| Sbjct: 1621 gcctactactttggctcggaggaggctatgatcaggcttgacatgagtgagttcatggag 1680 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 | ||||| || |||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 1681 cggcatactgtctccaaactcattggatcacctccaggttatgttgggtacactgaggga 1740 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgaga 549 || |||||||| |||||||| |||||||| || ||||||||||||||||||||||||| Sbjct: 1741 ggccaactaactgaagcagtccgtcgccgcccgtacacagttgttctctttgatgaga 1798
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 313 bits (158), Expect = 4e-82 Identities = 437/530 (82%) Strand = Plus / Plus Query: 96 ggtcctcttgtcacagaggcagatattcaacacatcgtctcatcatggactggtatacct 155 ||||| ||||| ||||| ||||||||||| ||||||||||| || ||||||||||| ||| Sbjct: 4459 ggtccacttgtgacagaagcagatattcagcacatcgtctcttcttggactggtatccct 4518 Query: 156 gtggagaaagtctcatctgatgagtcggaccgcctccttaagatggaagagacactccat 215 || ||||| ||||| |||| || || ||||| ||||| || |||||||| ||||| || Sbjct: 4519 gttgagaaggtctccactgacgaatctgaccgtctcctaaaaatggaagaaacacttcac 4578 Query: 216 acacgtatcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgct 275 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 4579 acacgaatcattggccaggatgaagctgtcaaagccattagtcgcgctattcgacgtgca 4638 Query: 276 cgtgttggcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaact 335 || ||||| ||||||||||| || |||| |||||||| ||||| || || || || ||| Sbjct: 4639 cgagttgggctcaagaatcccaacagacctattgctagtttcatcttttccggtcccact 4698 Query: 336 ggtgttggtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaa 395 |||||||| ||||||||| | |||||||| ||||| | || ||||| || || || ||| Sbjct: 4699 ggtgttgggaaatcagaactggcaaaggcactggctgcatattactttggttctgaagaa 4758 Query: 396 gccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatc 455 || |||||| | | ||||||||||| |||||||| ||||| || || || ||||| || Sbjct: 4759 gcaatgatccggcttgatatgagtgagttcatggaaagacacactgtctctaaactcatt 4818 Query: 456 ggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgt 515 ||||| || || ||||||||||| ||||| ||||| |||||| | || ||||| ||| | Sbjct: 4819 ggatccccccctggttatgttggttacacagagggtggtcaattgactgaagctgttagg 4878 Query: 516 cgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttc 575 || || || || |||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 4879 cgtcgaccttatacagttgtgctctttgatgagattgagaaggctcatcctgatgtcttc 4938 Query: 576 aacatgatgcttcagatcttagaagatgggaggctgacagatagcaaggg 625 |||||||||||||| || | |||||||| || ||||||| |||||||| Sbjct: 4939 aacatgatgcttcaaattcttgaagatggaagattgacagacagcaaggg 4988
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 291 bits (147), Expect = 1e-75 Identities = 423/515 (82%) Strand = Plus / Plus Query: 108 acagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaagtc 167 ||||||||||||||||| ||||| ||||| || ||||| || || ||||| ||||| ||| Sbjct: 4245 acagaggcagatattcagcacattgtctcttcctggaccggcattcctgtagagaaggtc 4304 Query: 168 tcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatcatt 227 ||| |||| || || || |||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 4305 tcaactgacgaatctgatcgcctcctaaaaatggaagaaacacttcatacccgagtcatt 4364 Query: 228 gggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggcctc 287 || ||||||||||| || ||||| ||||| || |||||| | ||||| |||||||||||| Sbjct: 4365 ggccaggatgaagcagtaaaagccattagtcgcgctatcagacgtgcccgtgttggcctc 4424 Query: 288 aagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 |||||||| || ||||| ||||| || ||||| || ||||| |||||||||||||| || Sbjct: 4425 aagaatcccaaccgacctattgccagtttcatcttttctggtccaactggtgttgggaag 4484 Query: 348 tcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcaga 407 |||||| | |||||| || | ||| | |||||||| || || || ||||| ||||| | Sbjct: 4485 tcagaactggcaaagtctttagcaacgtactactttggttctgaagaagcaatgattcgg 4544 Query: 408 ttagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctcca 467 | ||||||||||| || ||||| ||||| || ||||| ||||| ||||| ||||| || Sbjct: 4545 cttgatatgagtgagtttatggaaagacacactgtgtctaaactcatcggttcaccccct 4604 Query: 468 ggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatac 527 || |||||||| |||||||| || |||||| |||| ||||| ||| | || || || || Sbjct: 4605 gggtatgttggttacactgaaggtggtcaattaactgaagctgttaggcgtcgaccttat 4664 Query: 528 acagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgctt 587 |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 4665 acagttgtgctctttgatgagattgagaaggctcatcctgatgtcttcaacatgatgctt 4724 Query: 588 cagatcttagaagatgggaggctgacagatagcaa 622 || || | |||||||| || ||||||| ||||| Sbjct: 4725 caaattcttgaagatggaagattgacagacagcaa 4759
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 285 bits (144), Expect = 9e-74 Identities = 411/500 (82%) Strand = Plus / Plus Query: 105 gtcacagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaa 164 ||||| ||| |||| || |||||||| || || |||||||||||||| ||||| |||||| Sbjct: 1866 gtcacggagtcagacatccaacacattgtgtcttcatggactggtattcctgttgagaaa 1925 Query: 165 gtctcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatc 224 || ||| | |||||||| ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 1926 gtatcaaccgatgagtctgaccgtctcctcaagatggaagaaaccctccacaaacgtatc 1985 Query: 225 attgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggc 284 || || || || |||||||| ||||| || ||||| || || |||||||| |||||||| Sbjct: 1986 ataggccaagacgaagctgtgaaagccataagccgagccattcgccgtgcacgtgttgga 2045 Query: 285 ctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggt 344 ||||||||||| || || || || ||||| ||||||||||| || ||||| |||||||| Sbjct: 2046 ctcaagaatcctaaccgtccaatcgctagtttcatattctcgggtccaaccggtgttggg 2105 Query: 345 aaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatc 404 ||||| || | || || ||| | ||| | ||||||||||| || || ||||||||||| Sbjct: 2106 aaatctgagcttgccaaagctttagcagcttactacttcggttccgaagaagccatgatt 2165 Query: 405 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 464 | ||||||||||||| ||||||||||| || || || |||||||| ||||| |||||| Sbjct: 2166 cgtctagatatgagtgagttcatggagaggcacactgtctccaaactcatcggttcacct 2225 Query: 465 ccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtcca 524 || || ||||| || ||||| || |||||||| |||||||||| ||| | || || || Sbjct: 2226 cctggatatgtcggatacaccgaaggaggtcagttaacagaagcggttagacgtcgccct 2285 Query: 525 tacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatg 584 ||||| || ||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 2286 tacaccgtcgttctattcgatgagattgaaaaagcccatccagatgttttcaacatgatg 2345 Query: 585 cttcagatcttagaagatgg 604 ||||| ||| | |||||||| Sbjct: 2346 cttcaaatccttgaagatgg 2365
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 285 bits (144), Expect = 9e-74 Identities = 411/500 (82%) Strand = Plus / Plus Query: 105 gtcacagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaa 164 ||||| ||| |||| || |||||||| || || |||||||||||||| ||||| |||||| Sbjct: 1841 gtcacggagtcagacatccaacacattgtgtcttcatggactggtattcctgttgagaaa 1900 Query: 165 gtctcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatc 224 || ||| | |||||||| ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 1901 gtatcaaccgatgagtctgaccgtctcctcaagatggaagaaaccctccacaaacgtatc 1960 Query: 225 attgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggc 284 || || || || |||||||| ||||| || ||||| || || |||||||| |||||||| Sbjct: 1961 ataggccaagacgaagctgtgaaagccataagccgagccattcgccgtgcacgtgttgga 2020 Query: 285 ctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggt 344 ||||||||||| || || || || ||||| ||||||||||| || ||||| |||||||| Sbjct: 2021 ctcaagaatcctaaccgtccaatcgctagtttcatattctcgggtccaaccggtgttggg 2080 Query: 345 aaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatc 404 ||||| || | || || ||| | ||| | ||||||||||| || || ||||||||||| Sbjct: 2081 aaatctgagcttgccaaagctttagcagcttactacttcggttccgaagaagccatgatt 2140 Query: 405 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 464 | ||||||||||||| ||||||||||| || || || |||||||| ||||| |||||| Sbjct: 2141 cgtctagatatgagtgagttcatggagaggcacactgtctccaaactcatcggttcacct 2200 Query: 465 ccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtcca 524 || || ||||| || ||||| || |||||||| |||||||||| ||| | || || || Sbjct: 2201 cctggatatgtcggatacaccgaaggaggtcagttaacagaagcggttagacgtcgccct 2260 Query: 525 tacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatg 584 ||||| || ||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 2261 tacaccgtcgttctattcgatgagattgaaaaagcccatccagatgttttcaacatgatg 2320 Query: 585 cttcagatcttagaagatgg 604 ||||| ||| | |||||||| Sbjct: 2321 cttcaaatccttgaagatgg 2340
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 285 bits (144), Expect = 9e-74 Identities = 411/500 (82%) Strand = Plus / Minus Query: 105 gtcacagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaa 164 ||||| ||| |||| || |||||||| || || |||||||||||||| ||||| |||||| Sbjct: 19278 gtcacggagtcagacatccaacacattgtgtcttcatggactggtattcctgttgagaaa 19219 Query: 165 gtctcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatc 224 || ||| | |||||||| ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 19218 gtatcaaccgatgagtctgaccgtctcctcaagatggaagaaaccctccacaaacgtatc 19159 Query: 225 attgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggc 284 || || || || |||||||| ||||| || ||||| || || |||||||| |||||||| Sbjct: 19158 ataggccaagacgaagctgtgaaagccataagccgagccattcgccgtgcacgtgttgga 19099 Query: 285 ctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggt 344 ||||||||||| || || || || ||||| ||||||||||| || ||||| |||||||| Sbjct: 19098 ctcaagaatcctaaccgtccaatcgctagtttcatattctcgggtccaaccggtgttggg 19039 Query: 345 aaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatc 404 ||||| || | || || ||| | ||| | ||||||||||| || || ||||||||||| Sbjct: 19038 aaatctgagcttgccaaagctttagcagcttactacttcggttccgaagaagccatgatt 18979 Query: 405 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 464 | ||||||||||||| ||||||||||| || || || |||||||| ||||| |||||| Sbjct: 18978 cgtctagatatgagtgagttcatggagaggcacactgtctccaaactcatcggttcacct 18919 Query: 465 ccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtcca 524 || || ||||| || ||||| || |||||||| |||||||||| ||| | || || || Sbjct: 18918 cctggatatgtcggatacaccgaaggaggtcagttaacagaagcggttagacgtcgccct 18859 Query: 525 tacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatg 584 ||||| || ||||| || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 18858 tacaccgtcgttctattcgatgagattgaaaaagcccatccagatgttttcaacatgatg 18799 Query: 585 cttcagatcttagaagatgg 604 ||||| ||| | |||||||| Sbjct: 18798 cttcaaatccttgaagatgg 18779
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 270 bits (136), Expect = 5e-69 Identities = 409/500 (81%) Strand = Plus / Plus Query: 105 gtcacagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaa 164 ||||| ||| |||| || |||||||| || || |||||||||||||| ||||| |||||| Sbjct: 1814 gtcacggagtcagacatccaacacattgtgtcttcatggactggtattcctgttgagaaa 1873 Query: 165 gtctcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatc 224 || ||| | |||||||| ||||| ||||| ||||||||||| || ||||| | ||||||| Sbjct: 1874 gtatcaaccgatgagtctgaccgtctcctcaagatggaagaaaccctccacaaacgtatc 1933 Query: 225 attgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggc 284 || || || || |||||||| ||||| || ||||| || || |||||||| |||||||| Sbjct: 1934 ataggccaagacgaagctgtgaaagccataagccgagccattcgccgtgcacgtgttgga 1993 Query: 285 ctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggt 344 ||||||||||| || || || || ||||| ||||||||||| || ||||| |||||||| Sbjct: 1994 ctcaagaatcctaaccgtccaatcgctagtttcatattctcgggtccaaccggtgttggg 2053 Query: 345 aaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatc 404 ||||| || | || || ||| | ||| | ||||||||||| || || ||||||||||| Sbjct: 2054 aaatctgagcttgccaaagctttagcagcttactacttcggttccgaagaagccatgatt 2113 Query: 405 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 464 | |||||||||||||| ||||||||||| || || || |||| ||| ||||| |||| | Sbjct: 2114 cgtttagatatgagtgagttcatggagaggcacactgtctccacactcatcggttcactt 2173 Query: 465 ccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtcca 524 || || ||||| || ||||| || |||||||| |||||||||| ||| | || || || Sbjct: 2174 cctggatatgtcggatacaccgaaggaggtcagttaacagaagcggttagacgtcgccct 2233 Query: 525 tacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatg 584 ||||| || ||| | || |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 2234 tacaccgtcgttttattcgatgagattgaaaaagcccatccagatgttttcaacatgatg 2293 Query: 585 cttcagatcttagaagatgg 604 ||||| ||| | |||||||| Sbjct: 2294 cttcaaatccttgaagatgg 2313
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 242 bits (122), Expect = 1e-60 Identities = 395/486 (81%) Strand = Plus / Minus Query: 141 tggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctccttaagatg 200 ||||||||||| ||||| || |||||||| ||| || || || || || || |||||| Sbjct: 36958 tggactggtatccctgttgacaaagtctcggttgacgaatctgatcgtcttctcaagatg 36899 Query: 201 gaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagctattagccgt 260 ||||| ||| | || | ||| || ||||| ||| ||||||| || |||| |||||| | Sbjct: 36898 gaagacacattacacaaacgcattattggtcagcatgaagcagtagaagccattagcagg 36839 Query: 261 gctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagcttcata 320 |||||||| || ||||||||||| || ||||| || || | || ||||| |||||||| Sbjct: 36838 gctatccgtcgagctcgtgttggacttaagaaccctaacaggccaattgccagcttcatc 36779 Query: 321 ttctctggaccaactggtgttggtaaatcagaattagcaaaggctctggcatcctactac 380 || ||||| || |||||||| || || || || || || ||||| ||||| || |||||| Sbjct: 36778 ttttctggccctactggtgtggggaagtctgagttggccaaggcactggcctcatactac 36719 Query: 381 ttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacataca 440 || || || || ||||||||||| | | || ||||||||||||||||| || || ||| Sbjct: 36718 tttggatctgaagaagccatgattcgtcttgacatgagtgaattcatggaaaggcacaca 36659 Query: 441 gtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggtcaacta 500 || |||||||| || || ||||||||||| |||||||| || |||||||| |||||||| Sbjct: 36658 gtctccaaactcattggttcacctccaggatatgttggttatactgagggtggtcaactg 36599 Query: 501 acagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggca 560 || || |||||||| || ||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 36598 actgaggcagttcggcgtcgtccctacacggttgtactctttgatgagattgagaaagcc 36539 Query: 561 catccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgacagatagc 620 ||||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||||| Sbjct: 36538 catcctgatgtcttcaacatgatgcttcaaatcctggaagatgggaggctaacagatagt 36479 Query: 621 aaggga 626 |||||| Sbjct: 36478 aaggga 36473
>gb|AY450635.1| Solanum tuberosum clone plbr8 ATP-dependent CLP protease mRNA, partial cds Length = 669 Score = 232 bits (117), Expect = 1e-57 Identities = 321/389 (82%) Strand = Plus / Plus Query: 96 ggtcctcttgtcacagaggcagatattcaacacatcgtctcatcatggactggtatacct 155 ||||||||||| ||||| ||||||||||| ||||||||||| || ||||||||||| ||| Sbjct: 277 ggtcctcttgtaacagaagcagatattcagcacatcgtctcttcttggactggtatccct 336 Query: 156 gtggagaaagtctcatctgatgagtcggaccgcctccttaagatggaagagacactccat 215 || ||||| ||||| |||| || || ||||| ||||| || |||||||| ||||| || Sbjct: 337 gttgagaaggtctccactgacgaatctgaccgtctcctaaaaatggaagaaacacttcac 396 Query: 216 acacgtatcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgct 275 ||||| |||||||| |||||||||||||||||||| ||||| || ||||| || ||||| Sbjct: 397 acacgaatcattggccaggatgaagctgtcaaagccattagtcgcgctattcgacgtgcg 456 Query: 276 cgtgttggcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaact 335 || ||||||||||||||||| ||| | || |||||||| ||||| || || || || ||| Sbjct: 457 cgagttggcctcaagaatcccaataggcctattgctagtttcatcttttccggtcccact 516 Query: 336 ggtgttggtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaa 395 |||||||| ||||||||| | |||||||| ||||| | || ||||| || || || ||| Sbjct: 517 ggtgttgggaaatcagaactggcaaaggcactggctacatattactttggttctgaagaa 576 Query: 396 gccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatc 455 || |||||| | | ||||||||||| |||||||| ||||| || || || || || || Sbjct: 577 gcaatgatccggcttgatatgagtgagttcatggaaagacacacggtctctaagctcatt 636 Query: 456 ggatcacctccaggttatgttggctacac 484 ||||| || || ||||||||||| ||||| Sbjct: 637 ggatccccccctggttatgttggttacac 665
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 230 bits (116), Expect = 4e-57 Identities = 431/536 (80%) Strand = Plus / Plus Query: 96 ggtcctcttgtcacagaggcagatattcaacacatcgtctcatcatggactggtatacct 155 |||||| | |||||||| | |||||||| ||||| || || || ||||||||||| ||| Sbjct: 1842 ggtcctatggtcacagaatctgatattcagcacatagtgtcttcttggactggtattcct 1901 Query: 156 gtggagaaagtctcatctgatgagtcggaccgcctccttaagatggaagagacactccat 215 || |||||||| || ||||||| || || || || || ||||||||||| ||||| ||| Sbjct: 1902 gttgagaaagtatctactgatgaatctgatcgtctactcaagatggaagatacacttcat 1961 Query: 216 acacgtatcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgct 275 || | | ||||| || ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 1962 accagagtaattggtcaagatgaagctgttaaagccattagccgtgccatccgccgtgct 2021 Query: 276 cgtgttggcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaact 335 ||||| ||||| ||||| || || || || ||||| |||||||| ||||| || |||||| Sbjct: 2022 cgtgtaggcctaaagaaccccaaccgtccaattgcaagcttcatcttctcaggtccaact 2081 Query: 336 ggtgttggtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaa 395 |||||||| || || ||| | || || ||| |||| | |||||||| || ||||| ||| Sbjct: 2082 ggtgttggaaagtctgaacttgccaaagctttggctgcttactactttggttcagaagaa 2141 Query: 396 gccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatc 455 || ||||| | | ||||||||||| |||||||| || || || || |||||||| || Sbjct: 2142 gctatgatacggcttgatatgagtgagttcatggaaaggcacactgtatccaaactaatt 2201 Query: 456 ggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgt 515 || ||||| ||||||||||| || || ||||| || || || || || || || ||| | Sbjct: 2202 ggttcacccccaggttatgtaggttatactgaaggtggccagcttactgaggctgttaga 2261 Query: 516 cgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttc 575 || || |||||||| || ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 2262 cgtcgcccatacacggtggttctttttgatgaaattgagaaggcacatcctgatgtcttt 2321 Query: 576 aacatgatgcttcagatcttagaagatgggaggctgacagatagcaagggacggac 631 |||||||||||||| || | ||||| |||||| |||| || ||||||||| |||| Sbjct: 2322 aacatgatgcttcaaattcttgaagacgggaggttgactgacagcaagggaaggac 2377
>gb|AY108805.1| Zea mays PCO077883 mRNA sequence Length = 2049 Score = 230 bits (116), Expect = 4e-57 Identities = 305/368 (82%) Strand = Plus / Plus Query: 264 atccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagcttcatattc 323 ||||||||||||||||| || |||||||| || || | || ||||| ||||| || || Sbjct: 1000 atccgccgtgctcgtgtgggtctcaagaaccccaacaggccaattgcaagctttattttt 1059 Query: 324 tctggaccaactggtgttggtaaatcagaattagcaaaggctctggcatcctactacttc 383 |||| || || || ||||| || || || | ||||||||||| ||| |||| ||||| Sbjct: 1060 gctggtcccaccggcgttgggaagtctgagcttgcaaaggctcttgcagcctattacttt 1119 Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| ||||| || |||||| | | |||||||||||||||||||||||||| || || Sbjct: 1120 ggctctgaggaggctatgatccggcttgatatgagtgaattcatggagagacacacggta 1179 Query: 444 tccaaacttatcggatcacctccaggttatgttggctacactgagggaggtcaactaaca 503 ||||| || || || ||||||||||| ||||| || ||||||||||| || || || ||| Sbjct: 1180 tccaagctgattggttcacctccaggatatgtaggatacactgagggtggccagctgaca 1239 Query: 504 gaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacat 563 || |||||||| || || |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1240 gaggcagttcgacggcggccatacacagttgtgctctttgatgagattgagaaggcacac 1299 Query: 564 ccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgacagatagcaag 623 || |||||||||||||||||||||||||| || ||||||||||| |||| || |||||| Sbjct: 1300 cctgatgtcttcaacatgatgcttcagattttggaagatgggagattgactgacagcaag 1359 Query: 624 ggacggac 631 ||| |||| Sbjct: 1360 ggaaggac 1367 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaa 62 |||||||| |||||||||| || |||||| | |||||||||||||||||| Sbjct: 748 gaaatggaattgaaggcccagataacagccctcattgacaagagcaaggaa 798
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 228 bits (115), Expect = 2e-56 Identities = 490/615 (79%) Strand = Plus / Minus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 |||||||| |||||||||| || ||||| | ||||||||||||||||| ||| ||| Sbjct: 7096238 gaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaa 7096179 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || || || || || |||| || |||||||| || ||||| Sbjct: 7096178 gcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacatt 7096119 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 || || || ||||||||||| || || ||||| || ||| ||| ||||| || || Sbjct: 7096118 gtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagctt 7096059 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 ||||||||||||||||| | ||| ||| ||||||| || ||||| ||||| ||||| Sbjct: 7096058 cttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagcc 7095999 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 || || || | ||||||||||||||||| ||||||||||| || || | || ||||| Sbjct: 7095998 ataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgca 7095939 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||| ||| | || ||||| |||||||||||||| || | ||||| || || ||| Sbjct: 7095938 agcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgca 7095879 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 | || ||||| || || ||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 7095878 gcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggag 7095819 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 || || || || ||||| | || || ||||| ||||| |||||||| ||||| ||||| Sbjct: 7095818 aggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggt 7095759 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 || || || || || |||||||| ||| | ||||||||||| || || || || ||||| Sbjct: 7095758 ggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatc 7095699 Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctg 611 |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| Sbjct: 7095698 gaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctg 7095639 Query: 612 acagatagcaaggga 626 || || ||||||||| Sbjct: 7095638 actgacagcaaggga 7095624 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccgccgtgctcgtgttggcc 285 |||||||||||||||||||| Sbjct: 4233569 ccgccgtgctcgtgttggcc 4233588
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 228 bits (115), Expect = 2e-56 Identities = 490/615 (79%) Strand = Plus / Minus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 |||||||| |||||||||| || ||||| | ||||||||||||||||| ||| ||| Sbjct: 7096117 gaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaa 7096058 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || || || || || |||| || |||||||| || ||||| Sbjct: 7096057 gcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacatt 7095998 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 || || || ||||||||||| || || ||||| || ||| ||| ||||| || || Sbjct: 7095997 gtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagctt 7095938 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 ||||||||||||||||| | ||| ||| ||||||| || ||||| ||||| ||||| Sbjct: 7095937 cttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagcc 7095878 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 || || || | ||||||||||||||||| ||||||||||| || || | || ||||| Sbjct: 7095877 ataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgca 7095818 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||| ||| | || ||||| |||||||||||||| || | ||||| || || ||| Sbjct: 7095817 agcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgca 7095758 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 | || ||||| || || ||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 7095757 gcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggag 7095698 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 || || || || ||||| | || || ||||| ||||| |||||||| ||||| ||||| Sbjct: 7095697 aggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggt 7095638 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 || || || || || |||||||| ||| | ||||||||||| || || || || ||||| Sbjct: 7095637 ggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatc 7095578 Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctg 611 |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| Sbjct: 7095577 gaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctg 7095518 Query: 612 acagatagcaaggga 626 || || ||||||||| Sbjct: 7095517 actgacagcaaggga 7095503 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccgccgtgctcgtgttggcc 285 |||||||||||||||||||| Sbjct: 4233556 ccgccgtgctcgtgttggcc 4233575
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 228 bits (115), Expect = 2e-56 Identities = 490/615 (79%) Strand = Plus / Minus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 |||||||| |||||||||| || ||||| | ||||||||||||||||| ||| ||| Sbjct: 63924 gaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaa 63865 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || || || || || |||| || |||||||| || ||||| Sbjct: 63864 gcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacatt 63805 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 || || || ||||||||||| || || ||||| || ||| ||| ||||| || || Sbjct: 63804 gtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagctt 63745 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 ||||||||||||||||| | ||| ||| ||||||| || ||||| ||||| ||||| Sbjct: 63744 cttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagcc 63685 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 || || || | ||||||||||||||||| ||||||||||| || || | || ||||| Sbjct: 63684 ataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgca 63625 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||| ||| | || ||||| |||||||||||||| || | ||||| || || ||| Sbjct: 63624 agcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgca 63565 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 | || ||||| || || ||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 63564 gcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggag 63505 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 || || || || ||||| | || || ||||| ||||| |||||||| ||||| ||||| Sbjct: 63504 aggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggt 63445 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 || || || || || |||||||| ||| | ||||||||||| || || || || ||||| Sbjct: 63444 ggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatc 63385 Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctg 611 |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| Sbjct: 63384 gaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctg 63325 Query: 612 acagatagcaaggga 626 || || ||||||||| Sbjct: 63324 actgacagcaaggga 63310
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 228 bits (115), Expect = 2e-56 Identities = 490/615 (79%) Strand = Plus / Minus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 |||||||| |||||||||| || ||||| | ||||||||||||||||| ||| ||| Sbjct: 4538 gaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaa 4479 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || || || || || |||| || |||||||| || ||||| Sbjct: 4478 gcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacatt 4419 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 || || || ||||||||||| || || ||||| || ||| ||| ||||| || || Sbjct: 4418 gtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagctt 4359 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 ||||||||||||||||| | ||| ||| ||||||| || ||||| ||||| ||||| Sbjct: 4358 cttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagcc 4299 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 || || || | ||||||||||||||||| ||||||||||| || || | || ||||| Sbjct: 4298 ataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgca 4239 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||| ||| | || ||||| |||||||||||||| || | ||||| || || ||| Sbjct: 4238 agcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgca 4179 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 | || ||||| || || ||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 4178 gcatattactttggatctgaggaggccatgatcaggcttgatatgagtgaattcatggag 4119 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 || || || || ||||| | || || ||||| ||||| |||||||| ||||| ||||| Sbjct: 4118 aggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggt 4059 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 || || || || || |||||||| ||| | ||||||||||| || || || || ||||| Sbjct: 4058 ggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatc 3999 Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctg 611 |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| Sbjct: 3998 gaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctg 3939 Query: 612 acagatagcaaggga 626 || || ||||||||| Sbjct: 3938 actgacagcaaggga 3924
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 226 bits (114), Expect = 7e-56 Identities = 408/506 (80%) Strand = Plus / Plus Query: 120 attcaacacatcgtctcatcatggactggtatacctgtggagaaagtctcatctgatgag 179 |||||||| || || || || ||||| || || ||||| || ||||||||| | ||||| Sbjct: 1771 attcaacatattgtgtcctcctggacaggcattcctgttgataaagtctcagcagatgaa 1830 Query: 180 tcggaccgcctccttaagatggaagagacactccatacacgtatcattgggcaggatgaa 239 || || || ||||| ||||||||||| || | || | || |||||||| ||||||||| Sbjct: 1831 tctgatcgtctcctcaagatggaagatactttacacaagcgaatcattggtcaggatgaa 1890 Query: 240 gctgtcaaagctattagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaat 299 || || |||| ||||||||||||||||| || || || ||||| | ||||| || ||| Sbjct: 1891 gcagtgcaagccattagccgtgctatccgtcgagcccgagttggattgaagaaccctaat 1950 Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagca 359 || || ||||| |||||||| || ||||| ||||||||||| || || || ||||| || Sbjct: 1951 cgtccaattgccagcttcatcttttctggtccaactggtgtggggaagtctgaattggcc 2010 Query: 360 aaggctctggcatcctactacttcggctcagaggaagccatgatcagattagatatgagt 419 || || |||| | |||||||| ||||| || ||||||||||| | | || |||||| Sbjct: 2011 aaagcattggctgcatactactttggctctgaagaagccatgattcgtcttgacatgagt 2070 Query: 420 gaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttggc 479 ||||| ||||| || || ||||| ||||||||||| || ||||||||||| |||||||| Sbjct: 2071 gaatttatggaaaggcacacagtctccaaacttattggttcacctccaggatatgttggt 2130 Query: 480 tacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctc 539 ||||| || || |||||| | || ||||||||||| || ||||| ||||| ||||| ||| Sbjct: 2131 tacaccgaaggcggtcaattgactgaagcagttcgacgtcgtccttacactgttgtactc 2190 Query: 540 tttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaa 599 |||||||||||||| || || ||||| ||||| ||||||||||||||||| ||| | ||| Sbjct: 2191 tttgatgagattgagaaagcccatcctgatgtattcaacatgatgcttcaaatccttgaa 2250 Query: 600 gatgggaggctgacagatagcaaggg 625 ||||| || || ||||| |||||||| Sbjct: 2251 gatggaagactaacagacagcaaggg 2276
>gb|BT009382.1| Triticum aestivum clone wlm96.pk032.n8:fis, full insert mRNA sequence Length = 1205 Score = 220 bits (111), Expect = 4e-54 Identities = 387/479 (80%) Strand = Plus / Plus Query: 115 cagatattcaacacatcgtctcatcatggactggtatacctgtggagaaagtctcatctg 174 ||||||| || ||||| || ||||||||||||||||| || |||||||||||||| ||| Sbjct: 612 cagatatccagcacattgtgtcatcatggactggtattccagtggagaaagtctcgactg 671 Query: 175 atgagtcggaccgcctccttaagatggaagagacactccatacacgtatcattgggcagg 234 | || || || || |||||||||||||||||| | |||| ||| |||| || || | Sbjct: 672 acgaatctgataaacttcttaagatggaagagacattgcataagcgtgtcatcggccaag 731 Query: 235 atgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggcctcaagaatc 294 | || ||||| ||||| || || || || | |||||||||||||| |||||||||| | Sbjct: 732 acgaggctgtgaaagcaataagtcggtctgttcgccgtgctcgtgtgggcctcaagagcc 791 Query: 295 caaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaat 354 | || |||| ||||| |||||||| || | || || ||||||||||| |||||||| Sbjct: 792 ccaacagaccaattgcgagcttcatttttgcaggtcccactggtgttgggaaatcagagc 851 Query: 355 tagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcagattagata 414 | |||||| |||||||||| || ||||||||||| || |||||||||||| | | |||| Sbjct: 852 ttgcaaagactctggcatcatattacttcggctctgaagaagccatgatccggctggata 911 Query: 415 tgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatg 474 ||||||| ||||||||||| || || |||||||| | ||||| ||||| ||||| |||| Sbjct: 912 tgagtgagttcatggagaggcacactgtgtccaagttgatcggttcaccaccaggctatg 971 Query: 475 ttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttg 534 | || |||||||| || || || || || || || ||||| || || ||||||| |||| Sbjct: 972 tgggatacactgaaggtgggcagctgacggaggcggttcgacggcggccatacagcgttg 1031 Query: 535 ttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 593 | || |||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1032 tgctttttgatgagattgagaaggcacatccggatgtgttcaacatgatgctccagatc 1090 Score = 48.1 bits (24), Expect = 0.036 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 12 gaaatggagctgaaggc-ccaaattacagccattattgacaagagcaaggaaatggttaa 70 |||||||| ||||||| ||| || |||||| | ||||||||||||||||| ||| || Sbjct: 508 gaaatggaattgaaggcgccagataacagccttgattgacaagagcaaggagatgaacaa 567 Query: 71 agcagagactga 82 |||||||||||| Sbjct: 568 agcagagactga 579
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 220 bits (111), Expect = 4e-54 Identities = 489/615 (79%) Strand = Plus / Plus Query: 12 gaaatggagctgaaggcccaaattacagccattattgacaagagcaaggaaatggttaaa 71 |||||||| |||||||||| || ||||| | ||||||||||||||||| ||| ||| Sbjct: 1732 gaaatggaattgaaggcccagataacagctctcattgacaagagcaaggagatgagcaaa 1791 Query: 72 gcagagactgaatccggcgaagttggtcctcttgtcacagaggcagatattcaacacatc 131 |||||||||||||| || || || || || |||| || |||||||| || ||||| Sbjct: 1792 gcagagactgaatcaggggagacagggccactggtcaatgaagcagatatccagcacatt 1851 Query: 132 gtctcatcatggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctc 191 || || || ||||||||||| || || ||||| || ||| ||| ||||| || || Sbjct: 1852 gtatcctcgtggactggtattccagtagagaaggtatcaagtgacgagtccgataagctt 1911 Query: 192 cttaagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagct 251 ||||||||||||||||| | ||| ||| ||||||| || ||||| ||||| ||||| Sbjct: 1912 cttaagatggaagagactttgcatcagcgtgtcattggtcaagatgaggctgtgaaagcc 1971 Query: 252 attagccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgct 311 || || || | ||||||||||||||||| ||||||||||| || || | || ||||| Sbjct: 1972 ataagtcgctccatccgccgtgctcgtgtgggcctcaagaacccgaacaggccgattgca 2031 Query: 312 agcttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggca 371 |||||||| ||| | || ||||| |||||||||||||| || | ||||| || || ||| Sbjct: 2032 agcttcattttcgcaggtccaaccggtgttggtaaatccgagctcgcaaaagcacttgca 2091 Query: 372 tcctactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggag 431 | || ||||| || || ||||| ||||||||||| | |||||||||| |||||||||| Sbjct: 2092 gcatattactttggatctgaggaggccatgatcaggcttgatatgagtggattcatggag 2151 Query: 432 agacatacagtgtccaaacttatcggatcacctccaggttatgttggctacactgaggga 491 || || || || ||||| | || || ||||| ||||| |||||||| ||||| ||||| Sbjct: 2152 aggcacactgtatccaagttgattggttcacccccagggtatgttgggtacacggagggt 2211 Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 || || || || || |||||||| ||| | ||||||||||| || || || || ||||| Sbjct: 2212 ggacagctgactgaggcagttcgacgcaggccatacacagtcgtgcttttcgacgagatc 2271 Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctg 611 |||||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| Sbjct: 2272 gaaaaggcgcatccagatgtattcaacatgatgctccagatcttggaagatggaaggctg 2331 Query: 612 acagatagcaaggga 626 || || ||||||||| Sbjct: 2332 actgacagcaaggga 2346
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 216 bits (109), Expect = 7e-53 Identities = 391/485 (80%) Strand = Plus / Minus Query: 141 tggactggtatacctgtggagaaagtctcatctgatgagtcggaccgcctccttaagatg 200 ||||||||| | ||||| || ||||| || || ||||| || || ||||| || |||||| Sbjct: 64620 tggactggtgttcctgttgacaaagtatcgtcagatgaatctgatcgccttctcaagatg 64561 Query: 201 gaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagctattagccgt 260 ||||||||| | || | || | ||||| ||||||||||| || ||||| ||| || | Sbjct: 64560 gaagagacattacacaagcgagttattggtcaggatgaagcagtaaaagccatttgcagg 64501 Query: 261 gctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagcttcata 320 |||||||| || || || ||||| || ||||| || ||||| || ||||| ||||| || Sbjct: 64500 gctatccgtcgagcccgggttggactgaagaaccctaatcgtccaattgcaagctttatc 64441 Query: 321 ttctctggaccaactggtgttggtaaatcagaattagcaaaggctctggcatcctactac 380 || ||||| ||||||||||| || || || || || || || | ||||| || |||||| Sbjct: 64440 ttttctgggccaactggtgtggggaagtccgagttggccaaaacactggcttcatactac 64381 Query: 381 ttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacataca 440 || || || || || |||||||| | | || ||||||||||| ||||| || || ||| Sbjct: 64380 tttggttctgaagaggccatgattcggcttgacatgagtgaatttatggaaaggcacaca 64321 Query: 441 gtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggtcaacta 500 |||||||| || ||||| |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 64320 gtgtccaagctcatcggttcacctcctggatatgttggttacactgagggtggtcaactg 64261 Query: 501 acagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaaaaggca 560 || |||||||| || |||||||| ||||| ||||| ||||||||||||||||| || || Sbjct: 64260 actgaagcagtccgacgccgtccctacactgttgtactctttgatgagattgagaaagcc 64201 Query: 561 catccagatgtcttcaacatgatgcttcagatcttagaagatgggaggctgacagatagc 620 ||||| ||||| ||||||||||||||||||||| | |||||||| ||||| ||||| || Sbjct: 64200 catcctgatgtattcaacatgatgcttcagatcctggaagatggaaggctaacagacagt 64141 Query: 621 aaggg 625 ||||| Sbjct: 64140 aaggg 64136
>emb|BX830850.1|CNS0A0O2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZG04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1161 Score = 210 bits (106), Expect = 4e-51 Identities = 334/410 (81%) Strand = Plus / Plus Query: 195 aagatggaagagacactccatacacgtatcattgggcaggatgaagctgtcaaagctatt 254 ||||||||||| || ||||| | ||||||||| || | || |||||||| | ||| || Sbjct: 2 aagatggaagaaaccctccacaaacgtatcataggcgaagacgaagctgtgagagccata 61 Query: 255 agccgtgctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagc 314 ||||| || || |||||||| |||||||| ||||||||||| || || || || ||||| Sbjct: 62 agccgagccattcgccgtgcacgtgttggactcaagaatcctaaccgtccaatcgctagt 121 Query: 315 ttcatattctctggaccaactggtgttggtaaatcagaattagcaaaggctctggcatcc 374 ||||||||||| || ||||| |||||||| ||||| || | || || ||| | ||| | Sbjct: 122 ttcatattctcgggtccaaccggtgttgggaaatctgagcttgccaaagctttagcagct 181 Query: 375 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 434 ||||||||||| || || ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 182 tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg 241 Query: 435 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 494 || || || |||||||| ||||| |||||||| || ||||| || ||||| || |||||| Sbjct: 242 cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt 301 Query: 495 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 554 || |||||||||| ||| | || || || ||||| || ||||| || |||||||||||| Sbjct: 302 cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa 361 Query: 555 aaggcacatccagatgtcttcaacatgatgcttcagatcttagaagatgg 604 || || ||||||||||| ||||||||||||||||| ||| | |||||||| Sbjct: 362 aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatgg 411
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 198 bits (100), Expect = 2e-47 Identities = 325/400 (81%) Strand = Plus / Plus Query: 223 tcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttg 282 ||||||| || |||||||| || ||||| || || || |||||||||||||| ||||||| Sbjct: 1998 tcattggccaagatgaagccgttaaagcaatcagtcgggctatccgccgtgcccgtgttg 2057 Query: 283 gcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttg 342 | ||||| || ||||| || || || || || ||||| |||||||| ||||||||||||| Sbjct: 2058 ggctcaaaaacccaaaccgtcctatcgccagtttcatcttctctggtccaactggtgttg 2117 Query: 343 gtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatga 402 | |||||||| | || ||||| |||| | ||||||||||| ||||| ||||| |||| Sbjct: 2118 ggaaatcagagcttgctaaggccttggctgcttactacttcggttcagaagaagcaatga 2177 Query: 403 tcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcac 462 || | | || |||||||| |||||||| |||| || || || ||||| ||||| |||| Sbjct: 2178 tccgtcttgacatgagtgagttcatggaacgacacactgtttcgaaactcatcggttcac 2237 Query: 463 ctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtc 522 |||| ||||| || || ||||| || |||||||| ||||||| || ||||| ||| | | Sbjct: 2238 ctcctggttacgtaggatacacagaaggaggtcagttaacagaggcggttcgacgcaggc 2297 Query: 523 catacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatga 582 | ||||| ||||||||||||| || ||||| || |||||||| ||||| |||||||||| Sbjct: 2298 cctacactcttgttctctttgacgaaattgagaaagcacatcccgatgttttcaacatga 2357 Query: 583 tgcttcagatcttagaagatgggaggctgacagatagcaa 622 ||||||||||| ||||||| || || || || |||||||| Sbjct: 2358 tgcttcagatcctagaagacggtagactaactgatagcaa 2397
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 198 bits (100), Expect = 2e-47 Identities = 325/400 (81%) Strand = Plus / Minus Query: 223 tcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttg 282 ||||||| || |||||||| || ||||| || || || |||||||||||||| ||||||| Sbjct: 71769 tcattggccaagatgaagccgttaaagcaatcagtcgggctatccgccgtgcccgtgttg 71710 Query: 283 gcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttg 342 | ||||| || ||||| || || || || || ||||| |||||||| ||||||||||||| Sbjct: 71709 ggctcaaaaacccaaaccgtcctatcgccagtttcatcttctctggtccaactggtgttg 71650 Query: 343 gtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatga 402 | |||||||| | || ||||| |||| | ||||||||||| ||||| ||||| |||| Sbjct: 71649 ggaaatcagagcttgctaaggccttggctgcttactacttcggttcagaagaagcaatga 71590 Query: 403 tcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcac 462 || | | || |||||||| |||||||| |||| || || || ||||| ||||| |||| Sbjct: 71589 tccgtcttgacatgagtgagttcatggaacgacacactgtttcgaaactcatcggttcac 71530 Query: 463 ctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtc 522 |||| ||||| || || ||||| || |||||||| ||||||| || ||||| ||| | | Sbjct: 71529 ctcctggttacgtaggatacacagaaggaggtcagttaacagaggcggttcgacgcaggc 71470 Query: 523 catacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatga 582 | ||||| ||||||||||||| || ||||| || |||||||| ||||| |||||||||| Sbjct: 71469 cctacactcttgttctctttgacgaaattgagaaagcacatcccgatgttttcaacatga 71410 Query: 583 tgcttcagatcttagaagatgggaggctgacagatagcaa 622 ||||||||||| ||||||| || || || || |||||||| Sbjct: 71409 tgcttcagatcctagaagacggtagactaactgatagcaa 71370
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 198 bits (100), Expect = 2e-47 Identities = 325/400 (81%) Strand = Plus / Plus Query: 223 tcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttg 282 ||||||| || |||||||| || ||||| || || || |||||||||||||| ||||||| Sbjct: 1999 tcattggccaagatgaagccgttaaagcaatcagtcgggctatccgccgtgcccgtgttg 2058 Query: 283 gcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttg 342 | ||||| || ||||| || || || || || ||||| |||||||| ||||||||||||| Sbjct: 2059 ggctcaaaaacccaaaccgtcctatcgccagtttcatcttctctggtccaactggtgttg 2118 Query: 343 gtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatga 402 | |||||||| | || ||||| |||| | ||||||||||| ||||| ||||| |||| Sbjct: 2119 ggaaatcagagcttgctaaggccttggctgcttactacttcggttcagaagaagcaatga 2178 Query: 403 tcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcac 462 || | | || |||||||| |||||||| |||| || || || ||||| ||||| |||| Sbjct: 2179 tccgtcttgacatgagtgagttcatggaacgacacactgtttcgaaactcatcggttcac 2238 Query: 463 ctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtc 522 |||| ||||| || || ||||| || |||||||| ||||||| || ||||| ||| | | Sbjct: 2239 ctcctggttacgtaggatacacagaaggaggtcagttaacagaggcggttcgacgcaggc 2298 Query: 523 catacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatga 582 | ||||| ||||||||||||| || ||||| || |||||||| ||||| |||||||||| Sbjct: 2299 cctacactcttgttctctttgacgaaattgagaaagcacatcccgatgttttcaacatga 2358 Query: 583 tgcttcagatcttagaagatgggaggctgacagatagcaa 622 ||||||||||| ||||||| || || || || |||||||| Sbjct: 2359 tgcttcagatcctagaagacggtagactaactgatagcaa 2398
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 198 bits (100), Expect = 2e-47 Identities = 325/400 (81%) Strand = Plus / Plus Query: 223 tcattgggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttg 282 ||||||| || |||||||| || ||||| || || || |||||||||||||| ||||||| Sbjct: 1983 tcattggccaagatgaagccgttaaagcaatcagtcgggctatccgccgtgcccgtgttg 2042 Query: 283 gcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttg 342 | ||||| || ||||| || || || || || ||||| |||||||| ||||||||||||| Sbjct: 2043 ggctcaaaaacccaaaccgtcctatcgccagtttcatcttctctggtccaactggtgttg 2102 Query: 343 gtaaatcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatga 402 | |||||||| | || ||||| |||| | ||||||||||| ||||| ||||| |||| Sbjct: 2103 ggaaatcagagcttgctaaggccttggctgcttactacttcggttcagaagaagcaatga 2162 Query: 403 tcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcac 462 || | | || |||||||| |||||||| |||| || || || ||||| ||||| |||| Sbjct: 2163 tccgtcttgacatgagtgagttcatggaacgacacactgtttcgaaactcatcggttcac 2222 Query: 463 ctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtc 522 |||| ||||| || || ||||| || |||||||| ||||||| || ||||| ||| | | Sbjct: 2223 ctcctggttacgtaggatacacagaaggaggtcagttaacagaggcggttcgacgcaggc 2282 Query: 523 catacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatga 582 | ||||| ||||||||||||| || ||||| || |||||||| ||||| |||||||||| Sbjct: 2283 cctacactcttgttctctttgacgaaattgagaaagcacatcccgatgttttcaacatga 2342 Query: 583 tgcttcagatcttagaagatgggaggctgacagatagcaa 622 ||||||||||| ||||||| || || || || |||||||| Sbjct: 2343 tgcttcagatcctagaagacggtagactaactgatagcaa 2382
>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266, complete sequence Length = 113459 Score = 190 bits (96), Expect = 4e-45 Identities = 183/212 (86%) Strand = Plus / Minus Query: 414 atgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttat 473 ||||||||||| ||||| || || ||||||||||| || ||||| |||||||| || ||| Sbjct: 113356 atgagtgaatttatggaaaggcacacagtgtccaagctcatcggttcacctcctggatat 113297 Query: 474 gttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagtt 533 ||||| ||||||||||| |||||||| || |||||||| || |||||||| ||||| ||| Sbjct: 113296 gttggttacactgagggtggtcaactgactgaagcagtccgacgccgtccctacactgtt 113237 Query: 534 gttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 593 || ||||||||||||||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 113236 gtactctttgatgagattgagaaagcccatcctgatgtattcaacatgatgcttcagatc 113177 Query: 594 ttagaagatgggaggctgacagatagcaaggg 625 | |||||||| ||||| ||||| || ||||| Sbjct: 113176 ctggaagatggaaggctaacagacagtaaggg 113145
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 176 bits (89), Expect = 6e-41 Identities = 395/497 (79%) Strand = Plus / Plus Query: 108 acagaggcagatattcaacacatcgtctcatcatggactggtatacctgtggagaaagtc 167 |||||| |||| || || ||||| || || |||||||||||||| | ||| ||||| || Sbjct: 1554 acagagtcagacatccagcacattgtgtcttcatggactggtatccttgtagagaaggta 1613 Query: 168 tcatctgatgagtcggaccgcctccttaagatggaagagacactccatacacgtatcatt 227 ||| | |||||||| || | |||||| ||||||||||| || || || | |||| |||| Sbjct: 1614 tcaaccgatgagtctgatctcctcctcaagatggaagaaacccttcacaaacgtgtcata 1673 Query: 228 gggcaggatgaagctgtcaaagctattagccgtgctatccgccgtgctcgtgttggcctc 287 || || ||||||||||||||||| || ||||| || || |||||||| |||||||| ||| Sbjct: 1674 ggccaagatgaagctgtcaaagccataagccgagccattcgccgtgcacgtgttggactc 1733 Query: 288 aagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 ||||| || || || || || || || |||||||||| ||| || || ||||| || ||| Sbjct: 1734 aagaaccctaaccgtccaatagccagtttcatattctttggtcctaccggtgtcgggaaa 1793 Query: 348 tcagaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcaga 407 ||||| | || || ||| ||||| | |||||||| || | || ||||||||||| | Sbjct: 1794 tcagagcttgccaaagctttggcagcttactactttggatgtgaagaagccatgattcgt 1853 Query: 408 ttagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctcca 467 ||||||||||||| ||||||||||| || ||||| || ||||| || || |||||||| Sbjct: 1854 ctagatatgagtgagttcatggagaggcacacagtctcgaaactcataggttcacctcct 1913 Query: 468 ggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatac 527 || || || || |||||||| | ||| ||||| |||||||| | ||||| || ||| Sbjct: 1914 ggatacgtcggttacactgaaccacctcagctaacggaagcagtcagacgccgcccttac 1973 Query: 528 acagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgctt 587 ||||| ||||| || || ||||| || || || || |||||||| ||||||||||||||| Sbjct: 1974 acagtcgttctattcgacgagatagagaaagcccacccagatgttttcaacatgatgctt 2033 Query: 588 cagatcttagaagatgg 604 |||||| | |||||||| Sbjct: 2034 cagatcctcgaagatgg 2050
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 85.7 bits (43), Expect = 2e-13 Identities = 226/287 (78%) Strand = Plus / Plus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatca 350 ||||| ||||| || ||||| || || || || ||||| |||||||||||||| ||| | Sbjct: 2328 aatccgaatcggccaattgcaagttttattttttctgggccaactggtgttggaaaaact 2387 Query: 351 gaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcagatta 410 |||||| | || || || || || || | ||| || ||||| ||||| ||| | |||||| Sbjct: 2388 gaattaactaaagcactagcttcgtatttctttggatcagaagaagcaatggtaagatta 2447 Query: 411 gatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggt 470 |||||| ||||| |||||| |||||||||| || ||||| || || || || || ||| Sbjct: 2448 gatatgtctgaatacatggaacgacatacagtttcaaaactaataggttcgccacctggt 2507 Query: 471 tatgttggctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacaca 530 || ||||| || | ||| || |||||| |||| ||| |||| | || || || || ||| Sbjct: 2508 tacgttggatataatgaaggtggtcaattaacggaatcagtaagacgacgaccttataca 2567 Query: 531 gttgttctctttgatgagattgaaaaggcacatccagatgtcttcaa 577 |||||||| ||||||||||||||||| | ||||||||| || ||||| Sbjct: 2568 gttgttctatttgatgagattgaaaaaggacatccagacgtattcaa 2614
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 419 tgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttgg 478 |||||| ||||| ||||||||||| || ||| | || || ||||| |||||||| ||||| Sbjct: 35193 tgaatttatggaaagacatacagtttcgaaattaattggttcaccaccaggttacgttgg 35252 Query: 479 ctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttct 538 || | || || |||||| |||| ||||| ||| | || || ||||| || |||||| | Sbjct: 35253 ttataacgaaggtggtcaattaacggaagccgttagacgtcgaccatatactgttgtttt 35312 Query: 539 ctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttaga 598 ||||||||| |||||||||||||||||||||| || || | ||||| ||||| || || Sbjct: 35313 atttgatgaggttgaaaaggcacatccagatgtttttaatttaatgctacagatttttga 35372 Query: 599 agatgg 604 |||||| Sbjct: 35373 agatgg 35378 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 288 aagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 |||||||||||| |||| || || || ||| |||| ||||| ||||| |||||||||||| Sbjct: 35062 aagaatccaaatagacctatcgcaagtttcttattttctgggccaacaggtgttggtaaa 35121
>gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene, complete cds; chloroplast Length = 2454 Score = 83.8 bits (42), Expect = 6e-13 Identities = 150/186 (80%) Strand = Plus / Plus Query: 419 tgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggttatgttgg 478 |||||| ||||| ||||||||||| || ||| | || || ||||| |||||||| ||||| Sbjct: 1728 tgaatttatggaaagacatacagtttcgaaattaattggttcaccaccaggttacgttgg 1787 Query: 479 ctacactgagggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttct 538 || | || || |||||| |||| ||||| ||| | || || ||||| || |||||| | Sbjct: 1788 ttataacgaaggtggtcaattaacggaagccgttagacgtcgaccatatactgttgtttt 1847 Query: 539 ctttgatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatcttaga 598 ||||||||| |||||||||||||||||||||| || || | ||||| ||||| || || Sbjct: 1848 atttgatgaggttgaaaaggcacatccagatgtttttaatttaatgctacagatttttga 1907 Query: 599 agatgg 604 |||||| Sbjct: 1908 agatgg 1913 Score = 48.1 bits (24), Expect = 0.036 Identities = 51/60 (85%) Strand = Plus / Plus Query: 288 aagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 |||||||||||| |||| || || || ||| |||| ||||| ||||| |||||||||||| Sbjct: 1597 aagaatccaaatagacctatcgcaagtttcttattttctgggccaacaggtgttggtaaa 1656
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5 Length = 348178 Score = 77.8 bits (39), Expect = 4e-11 Identities = 99/119 (83%) Strand = Plus / Minus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 452 |||||||||||||||||||||||| |||||| ||||| |||||||| || |||| | Sbjct: 334076 gaagccatgatcagattagatatgtctgaatttatggaaagacatactgttagcaaatta 334017 Query: 453 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagt 511 || || ||||||||||| |||||||| | | ||||||||| ||||| ||||| ||||| Sbjct: 334016 attggttcacctccagggtatgttggatttaatgagggaggccaacttacagaggcagt 333958
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 452 ||||||||| | |||||||||||| ||| | |||||| || |||||||| |||||| | Sbjct: 147316 gaagccatggtgagattagatatgtctgagtacatggaaaggcatacagtctccaaatta 147375 Query: 453 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagc 508 || || || || |||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 147376 attggttctccaccaggttatgttggttataatgaaggaggtcaattaacagaagc 147431
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 452 ||||||||| | |||||||||||| ||| | |||||| || |||||||| |||||| | Sbjct: 68035 gaagccatggtgagattagatatgtctgagtacatggaaaggcatacagtctccaaatta 67976 Query: 453 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagc 508 || || || || |||||||||||||| || | ||| ||||||||| |||||||||| Sbjct: 67975 attggttctccaccaggttatgttggttataatgaaggaggtcaattaacagaagc 67920
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 514026 ctctttgatgagattgagaaggcccatccagatgtcttcaac 513985
>gb|U20646.1|SSU20646 Synechococcus sp. PCC 7942 heat shock protein ClpB (clpB) gene, complete cds Length = 2776 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 2153 ctctttgatgagattgagaaggcccatccagatgtcttcaac 2194
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1106777 ctctttgatgagattgagaaggcccatccagatgtcttcaac 1106818
>emb|BX572098.1| Prochlorococcus marinus MIT9313 complete genome; segment 4/7 Length = 346683 Score = 65.9 bits (33), Expect = 2e-07 Identities = 156/197 (79%) Strand = Plus / Plus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 452 |||||||||||| || |||| ||| |||||||||||| ||||||| || ||| || Sbjct: 97182 gaagccatgatccgactagacatgtcggaattcatggagcgacatacggtcagcaagctg 97241 Query: 453 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 512 |||||||||||||| || ||||| || | || || || || ||||| || ||||| ||| Sbjct: 97242 atcggatcacctcctggctatgtggggttcaacgaagggggacaactcaccgaagctgtt 97301 Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtc 572 |||||| | || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct: 97302 cgtcgcagaccttataccgttgtgctcttcgacgaaatcgaaaaggcacacccagatgtt 97361 Query: 573 ttcaacatgatgcttca 589 || ||| || ||||||| Sbjct: 97362 tttaacctgctgcttca 97378
>gb|AE017158.1| Chlamydophila pneumoniae TW-183, section 2 of 4 of the complete genome Length = 300380 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 568 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 180344 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 180399
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 568 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 357490 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 357435
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 568 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 483706 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 483761
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccaga 568 ||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 483416 cgtcgccgtccttactgcgttgttctctttgatgagatagaaaaggcacacccaga 483471
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatca 350 ||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| ||| || Sbjct: 1353858 aatccaaatcgtcccattgcgagcttcattttctcgggtccaactggcgttggaaaaaca 1353799 Query: 351 ga 352 || Sbjct: 1353798 ga 1353797 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 411 gatatgagtgaattcatggag 431 ||||||||||||||||||||| Sbjct: 2059087 gatatgagtgaattcatggag 2059067
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence Length = 119297 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 529 cagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 |||||||| | ||||||||||||||||| |||||| ||||||| |||||| Sbjct: 105878 cagttgttttgtttgatgagattgaaaaagcacattcagatgttttcaac 105927
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 |||||| |||| ||||| |||||||| |||||| ||| |||| | || ||||| ||| Sbjct: 1030983 ggtcaattaacggaagctgttcgtcgtaatccatatacaattgtcttgttagatgaaatt 1030924 Query: 552 gaaaaggcacatccagatgtcttcaa 577 |||||||| ||||||||||||||||| Sbjct: 1030923 gaaaaggcccatccagatgtcttcaa 1030898
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 58.0 bits (29), Expect = 4e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatca 350 ||||| |||||||| ||||| ||||| || || ||||| || || || ||||||||| || Sbjct: 56882 aatcccaatcgacctattgcaagctttattttttctgggcctacaggagttggtaaaaca 56941 Query: 351 gaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcagatta 410 |||||| | || || | || || |||| ||| || ||| | ||||| ||| |||||||| Sbjct: 56942 gaattaactaaagcattagcttcttacttctttggttcacaagaagcaatggtcagatta 57001 Query: 411 gatatgagtgaattcatggagagacatac 439 |||||| ||||| |||||| |||||||| Sbjct: 57002 gatatgtctgaatacatggaaagacatac 57030
>gb|AE013175.1| Thermoanaerobacter tengcongensis MB4, section 202 of 244 of the complete genome Length = 10177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 396 gccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaacttatc 455 |||||||| |||||||||||| |||| |||||| || |||||||| || ||||| || Sbjct: 827 gccatgataagattagatatgtcagaatacatggaaaggcatacagtttcaaaactcata 768 Query: 456 ggatcacctccaggttatgttggct 480 || || |||||||||||||| |||| Sbjct: 767 ggctctcctccaggttatgtgggct 743 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaacat 580 ||||| || ||||||||||| || ||||||||||| |||||||| Sbjct: 686 ctcttggacgagattgaaaaagcgcatccagatgttttcaacat 643
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome Length = 1315030 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 325 ctggaccaactggtgttggtaaatcagaattagcaaa 361 ||||||||||||||||||||||| | ||||||||||| Sbjct: 678011 ctggaccaactggtgttggtaaaactgaattagcaaa 677975
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 489 ggaggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgag 548 ||||| ||||| |||||||||||||| | || || || |||| ||||||||||||||| Sbjct: 2312121 ggagggcaacttacagaagcagttcgcagacgaccttatgcagtcgttctctttgatgag 2312062 Query: 549 attgaaaaggcacatccagatgtcttcaa 577 || |||||||| |||| ||||| ||||| Sbjct: 2312061 atagaaaaggcccatcatgatgtgttcaa 2312033
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 ||||| || ||||||||||||||||| | |||||||| || ||||||||||||||| Sbjct: 3643991 aatcccaaccgacccattgctagctttgtcttctctgggccgactggtgttggtaaa 3644047 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Plus Query: 459 tcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgc 518 |||||||| ||||||||||| || | || || |||||| |||| ||||| || || || Sbjct: 3644159 tcacctcctggttatgttggttataacgaaggtggtcaattaaccgaagctgtgcgccgt 3644218 Query: 519 cgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||| |||||||| || || || || || || ||||| || || || ||||||||||| Sbjct: 3644219 cgtccttacacagtggtgctgttcgacgaaatcgaaaaagcccaccccgatgtcttcaat 3644278 Query: 579 atgatgcttcagatcttagaagatgg 604 ||| |||| || || ||||||||||| Sbjct: 3644279 atgctgctgcaaattttagaagatgg 3644304
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagatgt 571 ||||||||||||||||||| ||||||||||| Sbjct: 1359786 ttgatgagattgaaaaggcgcatccagatgt 1359816
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 462 cctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 512 ||||||||||||||||||||| |||||||| ||| |||| ||||||||| Sbjct: 199078 cctccaggttatgttggctacgaagagggagggcaattaactgaagcagtt 199028
>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 6/17 Length = 349071 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagatgt 571 |||||||||||||||| |||||||||||||| Sbjct: 161712 ttgatgagattgaaaaagcacatccagatgt 161742
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 553485 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 553543 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 553725 tttgatgaaattgaaaaagctcatccagatgt 553756
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 588537 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 588595 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 588777 tttgatgaaattgaaaaagctcatccagatgt 588808
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 591658 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 591716 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 591898 tttgatgaaattgaaaaagctcatccagatgt 591929
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 506831 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 506889 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 507071 tttgatgaaattgaaaaagctcatccagatgt 507102
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 570225 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 570283 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 570465 tttgatgaaattgaaaaagctcatccagatgt 570496
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 554854 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 554912 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 555094 tttgatgaaattgaaaaagctcatccagatgt 555125
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 564291 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 564349 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| || ||||||||||| Sbjct: 564531 tttgatgaaattgaaaaagctcatccagatgt 564562
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagatc 593 ||||||||||||||||| ||||| ||||| || ||||||||| | |||||| Sbjct: 784045 gatgagattgaaaaggcgcatccggatgtttttaacatgatgttacagatc 784095
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 575502 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 575560 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| |||||||||||||| Sbjct: 575742 tttgatgaaattgaaaaagcacatccagatgt 575773
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaa 577 ||||| ||||||||||| ||||||||||||||||| Sbjct: 594920 gatgaaattgaaaaggcgcatccagatgtcttcaa 594954
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 300 cgacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaattagc 358 ||||| |||| |||||| || ||| |||||||||||||||||||||| | |||||||| Sbjct: 532834 cgaccaattggtagctttatcttccttggaccaactggtgttggtaaaactgaattagc 532892 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| |||||||||||||| Sbjct: 533074 tttgatgaaattgaaaaagcacatccagatgt 533105
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 336 ggtgttggtaaatcagaattagcaaaggctctggcatc 373 |||||||||||| |||||||||||||| |||| ||||| Sbjct: 199787 ggtgttggtaaaacagaattagcaaagtctcttgcatc 199750 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatac 439 ||||||||||| |||||||||||| ||||| ||||| |||||||| Sbjct: 1012072 gaagccatgattagattagatatgtcagaatttatggaaagacatac 1012026
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Minus Query: 459 tcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagttcgtcgc 518 |||||||||||||| ||||| || | || || |||||| |||| ||||| || || || Sbjct: 1103088 tcacctccaggttacgttggttataacgaaggtggtcaattaaccgaagctgtgcgccgt 1103029 Query: 519 cgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||| || || || || || |||||||| || ||||| || || || ||||||||||| Sbjct: 1103028 cgtccttatactgtggtgctatttgatgaaatcgaaaaagcccaccccgatgtcttcaat 1102969 Query: 579 atgatgcttcagatcttagaagatgg 604 ||| |||| || || ||||||||||| Sbjct: 1102968 atgctgctgcaaattttagaagatgg 1102943 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Minus Query: 261 gctatccgccgtgctcgtgttggcctcaagaatccaaatcgacccattgctagcttcata 320 |||||||| || |||||||| || | || ||||| || ||||||||||||||||| | Sbjct: 1103286 gctatccgtcgcgctcgtgtcggtttgaaaaatcccaaccgacccattgctagctttgtc 1103227 Query: 321 ttctctggaccaactggtgttggtaaa 347 ||||| || || |||||||| |||||| Sbjct: 1103226 ttctccgggccgactggtgtaggtaaa 1103200
>gb|DQ366720.1| Uncultured Prochlorococcus marinus clone HF10-110B11 genomic sequence Length = 42294 Score = 52.0 bits (26), Expect = 0.002 Identities = 146/186 (78%) Strand = Plus / Plus Query: 393 gaagccatgatcagattagatatgagtgaattcatggagagacatacagtgtccaaactt 452 ||||| ||||| |||||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 1303 gaagcaatgattagattagatatgtcagaatttatggaaagacatacagttagtaaactc 1362 Query: 453 atcggatcacctccaggttatgttggctacactgagggaggtcaactaacagaagcagtt 512 || || || ||||| ||||||||||| | | ||| || ||||| || || ||||| ||| Sbjct: 1363 ataggttcgcctcctggttatgttggttttaatgaaggtggtcagcttactgaagctgtt 1422 Query: 513 cgtcgccgtccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtc 572 | | ||||| || || || ||| | |||||||| |||||||||| ||||||||||| Sbjct: 1423 agaagacgtccttataccgtcgttttatttgatgaagttgaaaaggcgcatccagatgtt 1482 Query: 573 ttcaac 578 |||||| Sbjct: 1483 ttcaac 1488
>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7 Length = 346792 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtctt 574 |||||||||||||| ||||| |||||||| |||||||| Sbjct: 249792 ctctttgatgagatcgaaaaagcacatcccgatgtctt 249829
>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome Length = 2685015 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 292 atccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatcag 351 |||| ||| |||| |||| ||| ||| |||||| |||||||||||||| |||||| | | Sbjct: 2025272 atcctaatagaccgattggtagtttcttattcttaggaccaactggtgtaggtaaaactg 2025213 Query: 352 aattagcaaa 361 |||||||||| Sbjct: 2025212 aattagcaaa 2025203 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| || |||||||| ||||||||||| Sbjct: 2485832 tttgatgaaatcgaaaaggcgcatccagatgt 2485801
>gb|AE000512.1| Thermotoga maritima MSB8, complete genome Length = 1860725 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcagat 592 |||||||||||||| || ||||| ||||| |||||||| |||||||||| Sbjct: 896890 gatgagattgaaaaagcgcatccggatgtgttcaacatactgcttcagat 896939
>gb|AE006383.1| Lactococcus lactis subsp. lactis IL1403 section 145 of 218 of the complete genome Length = 11001 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 541 ttgatgagattgaaaaggcacatccagatgtcttcaa 577 ||||||| || ||||| |||||||||||||||||||| Sbjct: 6652 ttgatgaaatcgaaaaagcacatccagatgtcttcaa 6616
>ref|XM_763025.1| Giardia lamblia ATCC 50803 heat shock protein (GLP_64_7313_4665) partial mRNA Length = 2649 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 529 cagttgttctctttgatgagattgaaaaggcacatcc 565 |||||||||||||||| ||||| |||||||| ||||| Sbjct: 2057 cagttgttctctttgacgagatagaaaaggcccatcc 2093
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 522 ccatacacagttgttctctttgatgagattgaaaaggcacatccagatgtctt 574 ||||| |||||||| || |||||||| || ||||| || |||||||||||||| Sbjct: 1034678 ccatatacagttgtactttttgatgaaatagaaaaagctcatccagatgtctt 1034730 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 301 gacccattgctagcttcatattctctggaccaactggtgttggtaaatcagaatta 356 |||| |||||||| ||||||||||| ||||| || || || || ||| |||||||| Sbjct: 1034457 gacctattgctagtttcatattctcaggacctacaggagtaggaaaaacagaatta 1034512
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatcagaattagcaaaggctct 367 ||||| |||||||||||||| |||||||||| |||||||| Sbjct: 369799 ggacctactggtgttggtaagacagaattagctaaggctct 369839
>gb|AF016634.1|AF016634 Lactococcus lactis cremoris ClpB chaperone homolog (clpB) and phosphoribosylformylglycinamide cyclo-ligase (pur5) genes, complete cds; and phosphoribosylglycinamide formyltransferase (pur3) gene, partial cds Length = 4109 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagatgtcttcaa 577 ||||||| || ||||| |||||||||||||||||||| Sbjct: 2218 ttgatgaaatcgaaaaagcacatccagatgtcttcaa 2254
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtctt 574 |||||||||||||| || |||||||||||||| Sbjct: 1197259 gatgagattgaaaaagcgcatccagatgtctt 1197290
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 535 ttctctttgatgagattgaaaaggcacatccagatgtcttcaac 578 |||||||||| |||||||||||||| || || ||| |||||||| Sbjct: 328553 ttctctttgacgagattgaaaaggcccaccccgatatcttcaac 328596
>ref|XM_720722.1| Plasmodium yoelii yoelii str. 17XNL ClpB protein (PY05364) partial mRNA Length = 2730 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatcagaattagc 358 ||||| ||||||||||||||| |||||||||| Sbjct: 1921 ggacctactggtgttggtaaaacagaattagc 1952
>gb|AF348341.1| Plasmodium knowlesi caseinolytic protease C (clpC) gene, partial cds; apicoplast gene for apicoplast product Length = 641 Score = 48.1 bits (24), Expect = 0.036 Identities = 42/48 (87%) Strand = Plus / Plus Query: 459 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 506 ||||||||||||||| | || ||| | || |||||||||||||||||| Sbjct: 115 tcacctccaggttatataggatactcagaaggaggtcaactaacagaa 162
>ref|XM_674899.1| Plasmodium berghei strain ANKA hypothetical protein (PB000872.00.0) partial mRNA Length = 2955 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| || |||||||||||||||||||| Sbjct: 2401 tttgatgaaatagaaaaggcacatccagatgt 2432
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagatgtcttcaacat 580 |||||||||||||||| |||||||| || ||||| ||||| Sbjct: 136765 ttgatgagattgaaaaagcacatccggaagtctttaacat 136804 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 447 aaacttatcggatcacctccaggttatgt 475 ||||| || |||||||||||||||||||| Sbjct: 2303818 aaactaattggatcacctccaggttatgt 2303846
>gb|L43967.2| Mycoplasma genitalium G37, complete genome Length = 580076 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| ||||||||||||||||| ||||| Sbjct: 452149 tttgatgaaattgaaaaggcacatcctgatgt 452118
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 534 gttctctttgatgagattgaaaaggcacatccagatgtcttcaa 577 |||||||| |||||||| |||||||| ||| | ||||||||||| Sbjct: 10904 gttctcttggatgagatcgaaaaggcgcatgccgatgtcttcaa 10947
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 499 taacagaagcagttcgtcgccgtccata 526 |||| ||||||||||||||||||||||| Sbjct: 432451 taactgaagcagttcgtcgccgtccata 432424
>gb|U46549.1|PBU46549 Plasmodium berghei heat shock protein ClpB mRNA, complete cds Length = 2909 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| || |||||||||||||||||||| Sbjct: 2209 tttgatgaaatagaaaaggcacatccagatgt 2240
>gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 section 3 of 16 of the complete genome Length = 290002 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 550 ttgaaaaggcacatccagatgtcttcaacat 580 ||||||| |||||||||||||| |||||||| Sbjct: 122367 ttgaaaaagcacatccagatgttttcaacat 122397
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 550 ttgaaaaggcacatccagatgtcttcaacat 580 ||||||| |||||||||||||| |||||||| Sbjct: 1023333 ttgaaaaagcacatccagatgttttcaacat 1023363
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaattagcaaa 361 |||||||||||||||||||| |||| |||||||| Sbjct: 1843961 ggaccaactggtgttggtaagacagagttagcaaa 1843927
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 gagattgaaaaggcacatccagatgtcttcaacat 580 ||||| |||||||||||||| ||| |||||||||| Sbjct: 3147706 gagatcgaaaaggcacatccggatatcttcaacat 3147672
>ref|XM_812581.1| Trypanosoma cruzi strain CL Brener ATP-dependent Clp protease subunit, heat shock protein 78 (Tc00.1047053508737.100) partial mRNA Length = 2409 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 532 ttgttctctttgatgagattgaaaaggcacatcca 566 |||||||||| |||||| |||| |||||||||||| Sbjct: 1796 ttgttctcttcgatgagtttgagaaggcacatcca 1830
>ref|XM_758716.1| Theileria parva strain Muguga chromosome 4 hypothetical protein (TP04_0174) partial mRNA Length = 2958 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 390 gaggaagccatgatcagattagatatgagtgaattcatggaga 432 |||||||| || || ||||| ||||||||||||| |||||||| Sbjct: 2254 gaggaagcgataataagatttgatatgagtgaatacatggaga 2296
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccagatgtcttcaac 578 ||||||||||| ||||| || ||||| |||||||||||| Sbjct: 2063634 tttgatgagatcgaaaaagcgcatccggatgtcttcaac 2063596
>gb|AE014274.1| Streptococcus agalactiae 2603V/R section 84 of 100 of the complete genome Length = 22877 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaattagcaaa 361 |||||||||||||||||||| |||| |||||||| Sbjct: 20647 ggaccaactggtgttggtaagacagagttagcaaa 20613
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Plus Query: 282 ggcctcaagaatccaaatcgacccattgctagcttcatattctctggaccaactggtgtt 341 ||||| ||||||||||| |||| ||||||||||| || || ||||| ||||| || ||| Sbjct: 602071 ggcctaaagaatccaaacagaccaattgctagctttattttttctggtccaacgggagtt 602130 Query: 342 ggtaaatcagaatta 356 || ||| | |||||| Sbjct: 602131 ggaaaaactgaatta 602145 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaa 577 ||||| ||||| ||||||||||||||| |||||| ||||| Sbjct: 13022 ctcttcgatgaaattgaaaaggcacataaagatgttttcaa 12982
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaa 577 ||||| ||||||||||| ||||||||||| ||||| Sbjct: 2153171 gatgaaattgaaaaggcccatccagatgtattcaa 2153205
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 550 ttgaaaaggcacatccagatgtcttcaacat 580 ||||||| |||||||||||||| |||||||| Sbjct: 1017698 ttgaaaaagcacatccagatgttttcaacat 1017728
>emb|AL766854.1|SAG766854 Streptococcus agalactiae NEM316 complete genome, segment 12 Length = 98050 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaattagcaaa 361 |||||||||||||||||||| |||| |||||||| Sbjct: 13028 ggaccaactggtgttggtaagacagagttagcaaa 12994
>emb|AL596167.1| Listeria innocua Clip11262 complete genome, segment 5/12 Length = 253050 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 408 ttagatatgagtgaattcatgga 430 ||||||||||||||||||||||| Sbjct: 54176 ttagatatgagtgaattcatgga 54154
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 550 ttgaaaaggcacatccagatgtcttcaacat 580 ||||||| |||||||||||||| |||||||| Sbjct: 75230 ttgaaaaagcacatccagatgttttcaacat 75200
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaa 577 |||||||| |||||||| ||||| ||||||||||| Sbjct: 986293 gatgagatcgaaaaggcgcatcccgatgtcttcaa 986327
>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome Length = 1072950 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 531 gttgttctctttgatgagattgaaaaggcacatccagat 569 ||||||||||||||||| ||||| || || ||||||||| Sbjct: 670024 gttgttctctttgatgaaattgagaaagctcatccagat 670062
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Minus Query: 375 tactacttcggctcagaggaagccatgatcagattagatatgagtgaattcatggagaga 434 |||| |||||| || ||||||||||||||| | | |||||| ||||| ||||| || Sbjct: 2467192 tacttcttcggttccgaggaagccatgatccgtctggatatgtcggaatttatggaacga 2467133 Query: 435 catacagtgtccaaacttatcggatcacctccaggttatgttggctacactgagggaggt 494 || || || |||||| | || || || ||||| |||||||| ||||||| || || ||| Sbjct: 2467132 cacaccgtttccaaattaattggttcccctccgggttatgtgggctacaacgaaggcggt 2467073 Query: 495 caactaacagaagcagttcgtcgccgtccatacac 529 || | || |||||||| ||||||||||| ||||| Sbjct: 2467072 cagttgacggaagcagtacgtcgccgtccctacac 2467038
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Plus Query: 492 ggtcaactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagatt 551 |||||||| || ||||| |||| |||||||| || | || |||||||| || ||||| Sbjct: 1456024 ggtcaactcacggaagcgattcgccgccgtccctatgccgtcgttctcttcgacgagatc 1456083 Query: 552 gaaaaggcacatccagatgtcttcaac 578 ||||| || ||||| |||||||||||| Sbjct: 1456084 gaaaaagcccatcctgatgtcttcaac 1456110
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 456 ggatcacctccaggttatgttgg 478 ||||||||||||||||||||||| Sbjct: 2780334 ggatcacctccaggttatgttgg 2780312
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaa 353 ||||||||||||||||||||| ||||| Sbjct: 2279327 ggaccaactggtgttggtaaaacagaa 2279301 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagcaaa 361 ||||| || ||||||||| ||||||||||||| Sbjct: 660515 ccaacaggcgttggtaaaacagaattagcaaa 660484
>ref|NM_121549.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G15450 mRNA, complete cds Length = 2999 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatcaga 352 ||||||||||||||||||||| |||| Sbjct: 2145 ggaccaactggtgttggtaaaacaga 2170
>ref|XM_630186.1| Dictyostelium discoideum hypothetical protein (DDB0183953), partial mRNA Length = 1569 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 331 caactggtgttggtaaatcagaattagcaa 360 |||| ||||||||||||||| ||||||||| Sbjct: 35 caacaggtgttggtaaatcaaaattagcaa 64
>ref|XM_460208.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E22000g) partial mRNA Length = 2406 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 453 atcggatcacctccaggttatgttgg 478 |||||||||||||| ||||||||||| Sbjct: 1738 atcggatcacctcctggttatgttgg 1763
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 44.1 bits (22), Expect = 0.56 Identities = 58/70 (82%) Strand = Plus / Minus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| |||||| | ||||| || || ||| | || || || ||||||| Sbjct: 489512 tagatatgagtgaatacatggaaaaacatagtgtatctaaattaattggttctcctccag 489453 Query: 469 gttatgttgg 478 |||||||||| Sbjct: 489452 gttatgttgg 489443
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagat 569 |||||||| |||||||| |||||||||||| Sbjct: 322144 tttgatgaaattgaaaaagcacatccagat 322173
>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete sequence Length = 194665 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 389 agaggaagccatgatcagatta 410 |||||||||||||||||||||| Sbjct: 139673 agaggaagccatgatcagatta 139694
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 453 atcggatcacctccaggttatgttgg 478 |||||||||||||| ||||||||||| Sbjct: 1726627 atcggatcacctcctggttatgttgg 1726652
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 531 gttgttctctttgatgagattgaaaa 556 |||||||| ||||||||||||||||| Sbjct: 883809 gttgttctgtttgatgagattgaaaa 883784
>emb|AL935257.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 6/11 Length = 302050 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaacat 580 ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 164858 gatgaaattgaaaaggcgcatccagatgtgtttaacat 164821
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcaga 352 ||||||||||||||||||||| |||| Sbjct: 21379 ggaccaactggtgttggtaaaacaga 21354
>dbj|AB239684.1| Tetragenococcus halophilus gene for ClpB, complete cds Length = 3187 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagatgtctt 574 ||||||| |||||||| || |||||||||||||| Sbjct: 2541 ttgatgaaattgaaaaagctcatccagatgtctt 2574
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgt 340 ||||||||| |||| || |||||||| || || || |||||||||||||| Sbjct: 87863 aatccaaatagacctatcgctagctttattttttcaggaccaactggtgt 87912
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.56 Identities = 37/42 (88%) Strand = Plus / Plus Query: 552 gaaaaggcacatccagatgtcttcaacatgatgcttcagatc 593 |||||||| ||||| |||||||||||||| |||| |||||| Sbjct: 1956578 gaaaaggcccatcccgatgtcttcaacatcctgctgcagatc 1956619
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagat 569 |||||||| |||||||| |||||||||||| Sbjct: 319893 tttgatgaaattgaaaaagcacatccagat 319922
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaacat 580 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 1148621 gatgaaattgaaaaagcacatccagaagtattcaacat 1148658
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 456 ggatcacctccaggttatgttggcta 481 |||||||||||||||||||| ||||| Sbjct: 717548 ggatcacctccaggttatgtaggcta 717523 Score = 44.1 bits (22), Expect = 0.56 Identities = 40/46 (86%) Strand = Plus / Minus Query: 223 tcattgggcaggatgaagctgtcaaagctattagccgtgctatccg 268 ||||||| |||||| ||||||| ||| |||| ||||||||||||| Sbjct: 407043 tcattggccaggatcaagctgtaaaaagtatttgccgtgctatccg 406998
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 44.1 bits (22), Expect = 0.56 Identities = 169/218 (77%) Strand = Plus / Plus Query: 291 aatccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaatca 350 ||||| ||| |||| ||||| ||||| || || |||||||| || |||||||||||| | Sbjct: 122558 aatcctaatagaccaattgcaagctttattttttctggacccacaggtgttggtaaaacc 122617 Query: 351 gaattagcaaaggctctggcatcctactacttcggctcagaggaagccatgatcagatta 410 || || |||| || || ||||| || | ||| |||||||| | | ||||| ||| || Sbjct: 122618 gagctaacaaaagcacttgcatcttatttctttggctcagaagcttcaatgataagacta 122677 Query: 411 gatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccaggt 470 |||||| ||||| ||||| |||||||| || |||||| | || ||||| ||||| || Sbjct: 122678 gatatgtctgaatatatggaaagacatactgtatccaaattaattggatctcctccggga 122737 Query: 471 tatgttggctacactgagggaggtcaactaacagaagc 508 ||||| || || | ||| |||||| | |||||||||| Sbjct: 122738 tatgtaggatatagtgaaggaggttatttaacagaagc 122775
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 326 tggaccaactggtgttggtaaatcagaattagca 359 ||||||||| |||||||||||| ||||| ||||| Sbjct: 1285531 tggaccaacaggtgttggtaaaacagaaatagca 1285564
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 326 tggaccaactggtgttggtaaatcagaattagcaaaggctctggc 370 |||||| |||||||||||||| ||||||| || |||||| |||| Sbjct: 86591 tggacctactggtgttggtaagacagaattggccaaggctttggc 86635
>ref|NM_124486.2| Arabidopsis thaliana ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT5G51070 (ERD1) mRNA, complete cds Length = 3202 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2211 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2270 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 2271 agcaagctgataggctctcctcctggttatgttggct 2307
>gb|AC164310.2| Mus musculus BAC clone RP23-139E15 from chromosome 8, complete sequence Length = 204269 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 aattcatggagagacatacagtgtc 445 |||||||||||| |||||||||||| Sbjct: 3357 aattcatggagacacatacagtgtc 3333
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 696528 ccaactggtgttggtaaaacagagttagc 696500
>gb|AC135357.3| Mus musculus chromosome 8 clone RP24-84L15, complete sequence Length = 175089 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 421 aattcatggagagacatacagtgtc 445 |||||||||||| |||||||||||| Sbjct: 149557 aattcatggagacacatacagtgtc 149533
>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence Length = 189666 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 catacacagttgttctctttg 543 ||||||||||||||||||||| Sbjct: 37702 catacacagttgttctctttg 37722 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 catacacagttgttctctttg 543 ||||||||||||||||||||| Sbjct: 37649 catacacagttgttctctttg 37669
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 713875 ccaactggtgttggtaaaacagagttagc 713847
>gb|AE006538.1| Streptococcus pyogenes M1 GAS, section 67 of 167 of the complete genome Length = 10721 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 5401 ccaactggtgttggtaaaacagagttagc 5373
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 759478 ccaactggtgttggtaaaacagagttagc 759450
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 736529 ccaactggtgttggtaaaacagagttagc 736501
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 728852 ccaactggtgttggtaaaacagagttagc 728824
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 735120 ccaactggtgttggtaaaacagagttagc 735092
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 catacacagttgttctctttg 543 ||||||||||||||||||||| Sbjct: 114523 catacacagttgttctctttg 114543 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 catacacagttgttctctttg 543 ||||||||||||||||||||| Sbjct: 114470 catacacagttgttctctttg 114490
>ref|XM_642790.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (872.t00001) partial mRNA Length = 1137 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 437 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 496 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 497 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 545
>ref|XM_643122.1| Entamoeba histolytica HM-1:IMSS HSP101-related protein (511.t00001) partial mRNA Length = 2529 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1829 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1888 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1889 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1937
>ref|XM_643226.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (482.t00003) partial mRNA Length = 1089 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 542 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 601 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 602 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 650
>ref|XM_645824.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101 (192.t00018) partial mRNA Length = 2559 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1859 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1918 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1919 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1967
>ref|XM_648976.1| Entamoeba histolytica HM-1:IMSS heat shock protein 101, putative (64.t00034) partial mRNA Length = 1062 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 470 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 529 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 530 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 578
>ref|XM_643174.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (493.t00004) partial mRNA Length = 2586 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1886 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1945 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1946 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 1994
>ref|XM_643852.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (365.t00002) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_648360.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (82.t00010) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_647538.1| Entamoeba histolytica HM-1:IMSS AAA family ATPase (111.t00001) partial mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.2 Identities = 87/109 (79%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacctccag 468 ||||||||||||||| ||||| || |||| ||||| | ||| || ||| |||| |||| Sbjct: 1901 tagatatgagtgaatatatggaaagtcatagtgtgtcgagactgataggagcaccaccag 1960 Query: 469 gttatgttggctacactgagggaggtcaactaacagaagcagttcgtcg 517 | |||||||| || || ||||| ||| ||||||||||| ||||||| Sbjct: 1961 gatatgttggatatgaagaaggaggacaattaacagaagcaattcgtcg 2009
>ref|XM_671212.1| Plasmodium berghei strain ANKA heat shock protein 101 (PB001190.00.0) partial mRNA Length = 2676 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 531 gttgttctctttgatgagattgaaaaggcacatccagatgt 571 |||||||| |||||||| | ||||| |||||||||||||| Sbjct: 2116 gttgttctatttgatgaattagaaaaagcacatccagatgt 2156
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 694762 ccaactggtgttggtaaaacagagttagc 694734
>gb|AY133868.1| Arabidopsis thaliana clone U09460 putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1 protein precursor (At5g51070) mRNA, complete cds Length = 2869 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2047 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2106 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 2107 agcaagctgataggctctcctcctggttatgttggct 2143
>gb|AY035112.1| Arabidopsis thaliana putative ATP-dependent Clp protease ATP-binding subunit ClpD, ERD1 protein precursor (At5g51070) mRNA, complete cds Length = 3124 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2116 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2175 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 2176 agcaagctgataggctctcctcctggttatgttggct 2212
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 453 atcggatcacctccaggttatgttggcta 481 ||||| ||||||||||| ||||||||||| Sbjct: 40067 atcggctcacctccaggctatgttggcta 40039
>gb|AE011965.1| Xanthomonas axonopodis pv. citri str. 306, section 343 of 469 of the complete genome Length = 10871 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 552 gaaaaggcacatccagatgtcttcaacat 580 |||||||| ||||| |||||||||||||| Sbjct: 820 gaaaaggcgcatccggatgtcttcaacat 792
>gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114411 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 604 ggaggctgacagatagcaagg 624 ||||||||||||||||||||| Sbjct: 53231 ggaggctgacagatagcaagg 53251
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 cctccaggttatgttggctac 482 ||||||||||||||||||||| Sbjct: 2343412 cctccaggttatgttggctac 2343392
>dbj|AK222024.1| Arabidopsis thaliana mRNA for Erd1 protein precursor, complete cds, clone: RAFL22-71-D22 Length = 1140 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 188 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 247 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 248 agcaagctgataggctctcctcctggttatgttggct 284
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccagatgtcttcaacat 580 |||||||| || ||||| |||||||||||||| || ||||| Sbjct: 2292709 tttgatgaaatcgaaaaagcacatccagatgtatttaacat 2292669 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaattagc 358 ||||| || |||||||||||| |||||||||| Sbjct: 1875147 ggacctacaggtgttggtaaaacagaattagc 1875116
>gb|AY037264.1| Arabidopsis thaliana AT5g51070/K3K7_27 mRNA, complete cds Length = 3164 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2213 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2272 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 2273 agcaagctgataggctctcctcctggttatgttggct 2309
>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome Length = 1900521 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 666798 ccaactggtgttggtaaaacagagttagc 666770
>gb|AF203700.1|AF203700 Phaseolus lunatus ClpB (clpB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3214 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgtcttcaacat 580 |||||||| || || |||||||||| |||||||||||||| Sbjct: 2339 tttgatgaaatagagaaggcacatcacgatgtcttcaacat 2379
>gb|AF270036.1|AF270036 Staphylococcus epidermidis strain SR1 clone step.1043a11 genomic sequence Length = 3742 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 618 tagatatgagtgaatttatggagaaacat 590
>gb|AF269928.1|AF269928 Staphylococcus epidermidis strain SR1 clone step.1032f01 genomic sequence Length = 3002 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 1603 tagatatgagtgaatttatggagaaacat 1575
>gb|AF269816.1|AF269816 Staphylococcus epidermidis strain SR1 clone step.1024b10 genomic sequence Length = 3985 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 1357 tagatatgagtgaatttatggagaaacat 1329
>gb|AF269634.1|AF269634 Staphylococcus epidermidis strain SR1 clone step.1014g06 genomic sequence Length = 3295 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 1752 tagatatgagtgaatttatggagaaacat 1724
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaatt 355 ||||| ||||||||||||||| ||||||| Sbjct: 906243 ggacctactggtgttggtaaaacagaatt 906215
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgt 571 |||||||||||||| || ||||||||||| Sbjct: 935803 gatgagattgaaaaagctcatccagatgt 935831
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome Length = 1894275 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 330 ccaactggtgttggtaaatcagaattagc 358 |||||||||||||||||| |||| ||||| Sbjct: 1229936 ccaactggtgttggtaaaacagagttagc 1229964
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 170716 tagatatgagtgaatttatggagaaacat 170744
>dbj|D17582.1|ATHERD1 Arabidopsis thaliana mRNA for ERD1 protein, complete cds Length = 3125 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 384 ggctcagaggaagccatgatcagattagatatgagtgaattcatggagagacatacagtg 443 ||||| || ||| ||||| | ||||| || |||||||||| ||||||| | ||||| ||| Sbjct: 2161 ggctcggaagaatccatgctgagattggacatgagtgaatacatggagcgtcatactgtg 2220 Query: 444 tccaaacttatcggatcacctccaggttatgttggct 480 ||| || || || || ||||| ||||||||||||| Sbjct: 2221 agcaagctgataggctctcctcctggttatgttggct 2257
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 541 ttgatgagattgaaaaggcacatccagat 569 ||||||| || |||||||||||||||||| Sbjct: 763966 ttgatgaaatagaaaaggcacatccagat 763994 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 tggaccaactggtgttggtaaatc 349 ||||||| |||||||||||||||| Sbjct: 1138129 tggaccagctggtgttggtaaatc 1138106
>gb|AE015450.1| Mycoplasma gallisepticum strain R complete genome Length = 996422 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccaga 568 |||||||| |||||||| ||||||||||| Sbjct: 666863 tttgatgaaattgaaaaagcacatccaga 666835
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 409 tagatatgagtgaattcatggagagacat 437 |||||||||||||||| ||||||| |||| Sbjct: 286453 tagatatgagtgaatttatggagaaacat 286481
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 552 gaaaaggcacatccagatgtcttcaacat 580 |||||||| ||||||||||| |||||||| Sbjct: 6047163 gaaaaggcgcatccagatgtattcaacat 6047135
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 326 tggaccaactggtgttggtaaatcagaattagcaaaggctctggc 370 |||||| |||||||||||||| ||||||| || |||||| |||| Sbjct: 87807 tggacctactggtgttggtaagacagaattggccaaggctttggc 87851
>ref|XM_630045.1| Dictyostelium discoideum hypothetical protein (DDB0183816), partial mRNA Length = 2661 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 330 ccaactggtgttggtaaatcagaattagcaaa 361 |||||||||||||||||| | ||||| ||||| Sbjct: 1822 ccaactggtgttggtaaaactgaattggcaaa 1853
>ref|XM_629660.1| Dictyostelium discoideum hypothetical protein (DDB0184439), partial mRNA Length = 3576 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatca 350 ||||||||||| |||||||||||| Sbjct: 1765 ggaccaactggagttggtaaatca 1788
>gb|AC008368.21| Trypanosoma brucei chromosome 2 clone RPCI93-1F7, complete sequence Length = 150968 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 145685 tttgatgaggtggaaaaggcacatccaaatgt 145716
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 546 gagattgaaaaggcacatccagatgtcttcaa 577 |||||||||||||| || || ||||||||||| Sbjct: 1800617 gagattgaaaaggcgcacccggatgtcttcaa 1800586
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||| ||||||||||||||||| || ||||| Sbjct: 659819 tttgacgagattgaaaaggcacaccctgatgt 659850
>gb|AE008449.1| Streptococcus pneumoniae R6 section 65 of 184 of the complete genome Length = 11727 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 cctccaggttatgttggcta 481 |||||||||||||||||||| Sbjct: 3338 cctccaggttatgttggcta 3319
>gb|AC007866.11| Trypanosoma brucei chromosome 2 clone RPCI93-36E18, complete sequence Length = 110159 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 2609 tttgatgaggtggaaaaggcacatccaaatgt 2640
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 1086483 tttgatgaggtggaaaaggcacatccaaatgt 1086514
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 314 cttcatattctctggaccaactggtgttggtaaatcagaa 353 |||||| |||| ||||| ||||||||||||||| ||||| Sbjct: 1167149 cttcatcttcttaggaccgactggtgttggtaaaacagaa 1167188
>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence Length = 150909 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ttaaagcagagactgaatcc 86 |||||||||||||||||||| Sbjct: 131052 ttaaagcagagactgaatcc 131071
>gb|AE009347.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 117 of 187 of the complete sequence Length = 12234 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaac 578 |||||||| ||||| || ||||| |||||||||||| Sbjct: 9514 gatgagatcgaaaaagcgcatccggatgtcttcaac 9549
>gb|AE008266.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 70 of 187 of the complete sequence Length = 11252 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaac 578 |||||||| ||||| || ||||| |||||||||||| Sbjct: 3310 gatgagatcgaaaaagcgcatccggatgtcttcaac 3275
>gb|AF512536.1| Hepatitis A virus isolate DL3, complete genome Length = 7476 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4967 atatgagtgaattcatggag 4986
>ref|XM_946645.1| Trypanosoma brucei TREU927 ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100) (Tb927.2.5980) partial mRNA Length = 2613 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 2026 tttgatgaggtggaaaaggcacatccaaatgt 2057
>emb|CT010504.7| M.truncatula DNA sequence from clone MTH2-28A3 on chromosome 3, complete sequence Length = 114882 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 319 tattctctggaccaactggtgttggtaaatcagaattagcaaag 362 |||||| ||| |||||||||||||| ||| | ||| |||||||| Sbjct: 57358 tattctgtggcccaactggtgttgggaaaactgaactagcaaag 57315
>ref|XM_720276.1| Plasmodium yoelii yoelii str. 17XNL heat shock protein ClpB (PY00565) partial mRNA Length = 3147 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| || |||||||| ||||||||||| Sbjct: 2593 tttgatgaaatagaaaaggctcatccagatgt 2624
>gb|AE004353.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 10 of 93 of the complete chromosome Length = 31190 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 459 tcacctccaggttatgttggctac 482 |||||||| ||||||||||||||| Sbjct: 18243 tcacctccgggttatgttggctac 18266
>ref|XM_740381.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000511.02.0) partial mRNA Length = 2961 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| || |||||||| ||||||||||| Sbjct: 2410 tttgatgaaatagaaaaggctcatccagatgt 2441
>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence Length = 127131 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ctggaccaactggtgttggt 344 |||||||||||||||||||| Sbjct: 35460 ctggaccaactggtgttggt 35441
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 ctggaccaactggtgttggt 344 |||||||||||||||||||| Sbjct: 2706 ctggaccaactggtgttggt 2725
>gb|BC085675.1| Danio rerio cDNA clone IMAGE:5912857, **** WARNING: chimeric clone **** Length = 2636 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctcagaggaagccatgatca 405 |||||||||||||||||||| Sbjct: 1395 ctcagaggaagccatgatca 1414
>emb|X95276.2|PFCOMPIRB Plasmodium falciparum complete gene map of plastid-like DNA (IR-B) Length = 14009 Score = 40.1 bits (20), Expect = 8.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 459 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 506 |||||||| ||||||||||| || | || ||||||||| |||||||| Sbjct: 12554 tcacctcctggttatgttggttattcagaaggaggtcaattaacagaa 12601
>emb|X87631.1|PFCLPCGEN P.falciparum putative plastid clpC gene (partial) Length = 2298 Score = 40.1 bits (20), Expect = 8.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 459 tcacctccaggttatgttggctacactgagggaggtcaactaacagaa 506 |||||||| ||||||||||| || | || ||||||||| |||||||| Sbjct: 1621 tcacctcctggttatgttggttattcagaaggaggtcaattaacagaa 1668
>gb|AF485328.1| Hepatitis A virus isolate LY6, complete genome Length = 7477 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4968 atatgagtgaattcatggag 4987
>gb|AF357222.1| Hepatitis A virus isolate LU38/WT polyprotein gene, complete cds Length = 7477 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4968 atatgagtgaattcatggag 4987
>emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon Length = 6480 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaacat 580 |||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 5875 ctctttgacgagattgagaaggcccaccccgacgtcttcaacat 5918
>emb|X83302.1|HAVCOMPL Hepatitis A virus complete genome Length = 7421 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75216.1|HAVRNAHFS Hepatitis A virus GBM/HFS RNA Length = 7446 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75215.1|HAVRNAGWT Hepatitis A virus GBM/WT RNA Length = 7450 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4922 atatgagtgaattcatggag 4941
>emb|X75214.1|HAVRNAGBM Hepatitis A virus GBM/FRhK RNA Length = 7421 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4904 atatgagtgaattcatggag 4923
>emb|X70845.1|HAV23ABC Hepatitis A virus gene for 2B, 2C, 3A, 3B and 3c proteins Length = 2264 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 1294 atatgagtgaattcatggag 1313
>emb|X15463.1|HAV15B Human hepatitis A virus (HAV) strain HAS-15 mRNA for viral proteins 2C, 3A-3D Length = 2676 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 261 atatgagtgaattcatggag 280
>gb|AC151265.3| Mus musculus BAC clone RP24-372H7 from chromosome 17, complete sequence Length = 191739 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aagatggaagagacactcca 214 |||||||||||||||||||| Sbjct: 102342 aagatggaagagacactcca 102361
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 8.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 543 gatgagattgaaaaggcacatccagatgtcttcaacatgatgcttcag 590 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 3760571 gatgagatcgaaaaggcacaccctgatgtgttcaatattctgcttcag 3760524
>gb|AC154740.2| Mus musculus BAC clone RP23-118I16 from chromosome 9, complete sequence Length = 222313 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||||| || ||||| ||||||||||| Sbjct: 92108 tttgatgagatagacaaggcccatccagatgt 92077
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gatatgagtgaattcatgga 430 |||||||||||||||||||| Sbjct: 107744 gatatgagtgaattcatgga 107763
>emb|BX248584.1| Blochmannia floridanus complete genome; segment 1/3 Length = 250050 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaa 346 |||||||||||||||||||| Sbjct: 215986 ggaccaactggtgttggtaa 216005
>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6 Length = 233050 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 ggaccaactggtgttggtaaatcagaattagc 358 ||||||||||| ||||| ||| |||||||||| Sbjct: 85863 ggaccaactggcgttgggaaaacagaattagc 85832
>emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complete genome, segment 4 Length = 224050 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatcagaattagc 358 ||||||||||| ||||| ||| |||||||||| Sbjct: 173054 ggaccaactggcgttgggaaaacagaattagc 173085
>emb|AL766845.1|SAG766845 Streptococcus agalactiae NEM316 complete genome, segment 3 Length = 178050 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ggaccaactggtgttggtaaatcagaattagc 358 ||||||||||| ||||| ||| |||||||||| Sbjct: 24987 ggaccaactggcgttgggaaaacagaattagc 25018
>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24, complete sequence Length = 177516 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ctcagaggaagccatgatca 405 |||||||||||||||||||| Sbjct: 104815 ctcagaggaagccatgatca 104834
>emb|AJ251205.1|BSU251205 Brucella suis clpB gene for ClpB protein Length = 3179 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 546 gagattgaaaaggcacatccagatgtcttcaa 577 |||||||||||||| || || ||||||||||| Sbjct: 2490 gagattgaaaaggcgcacccggatgtcttcaa 2521
>emb|AJ250726.2|TBR250726 Trypanosoma brucei HSP100 gene, GPI-PLC gene, beta prime COP gene, RPL44 gene, ORF1 (partial), ORF2, ORF3, ORF4, ORF5, ORF6 and ORF7 (partial), shorter allele Length = 24181 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 7456 tttgatgaggtggaaaaggcacatccaaatgt 7487
>emb|AJ000080.1|TCAJ80 Trypanosoma brucei hsp100 and gpi-plc genes Length = 7000 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||||||| | ||||||||||||||| |||| Sbjct: 2065 tttgatgaggtggaaaaggcacatccaaatgt 2096
>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 186256 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tggttaaagcagagactgaa 83 |||||||||||||||||||| Sbjct: 148178 tggttaaagcagagactgaa 148197
>gb|AC018921.22| Homo sapiens 12 BAC RP11-956E11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188666 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 tgatgagattgaaaaggcac 561 |||||||||||||||||||| Sbjct: 74506 tgatgagattgaaaaggcac 74525
>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete sequence Length = 216540 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ggtgttggtaaatcagaatt 355 |||||||||||||||||||| Sbjct: 49824 ggtgttggtaaatcagaatt 49843
>gb|AC080088.5| Homo sapiens BAC clone RP11-716B14 from 4, complete sequence Length = 71463 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 gaggaaatggagctgaaggc 28 |||||||||||||||||||| Sbjct: 26806 gaggaaatggagctgaaggc 26825
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 gaaatggttaaagcagagactgaa 83 |||| ||||||||||||||||||| Sbjct: 31420 gaaaaggttaaagcagagactgaa 31397
>ref|XM_572184.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 2617 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 ||||| ||||||||||||||||| || ||||| Sbjct: 1846 tttgacgagattgaaaaggcacaccctgatgt 1877
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 540 tttgatgagattgaaaaggcacatccagatgt 571 |||||||| ||||||||||| ||||| ||||| Sbjct: 443468 tttgatgaaattgaaaaggctcatcctgatgt 443499
>gb|AC074041.3|AC074041 Mus musculus strain C57BL6/J chromosome 2 clone RP23-258D16, complete sequence Length = 170548 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aatggttaaagcagagactg 81 |||||||||||||||||||| Sbjct: 73977 aatggttaaagcagagactg 73958
>gb|AC155837.7| Mus musculus 6 BAC RP24-409L6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 156886 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 gaagttggtcctcttgtcacagaggcag 117 |||| |||||||||| |||||||||||| Sbjct: 52452 gaagatggtcctcttatcacagaggcag 52479
>gb|AE009461.1| Brucella melitensis 16M chromosome I, section 18 of 195 of the complete sequence Length = 10744 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 546 gagattgaaaaggcacatccagatgtcttcaa 577 |||||||||||||| || || ||||||||||| Sbjct: 9602 gagattgaaaaggcgcacccggatgtcttcaa 9633
>gb|AY974170.1| Hepatitis A virus strain M2 polyprotein mRNA, complete cds Length = 6722 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 4235 atatgagtgaattcatggag 4254
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 cctccaggttatgttggcta 481 |||||||||||||||||||| Sbjct: 770923 cctccaggttatgttggcta 770904
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 537 ctctttgatgagattgaaaaggcacatccagatgtcttcaacat 580 |||||||| |||||||| ||||| || || || ||||||||||| Sbjct: 1413441 ctctttgacgagattgagaaggcccaccccgacgtcttcaacat 1413398
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 546 gagattgaaaaggcacatccagatgtcttcaa 577 |||||||||||||| || || ||||||||||| Sbjct: 1817476 gagattgaaaaggcgcacccggatgtcttcaa 1817445
>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 Length = 87180 Score = 40.1 bits (20), Expect = 8.7 Identities = 62/76 (81%) Strand = Plus / Plus Query: 405 agattagatatgagtgaattcatggagagacatacagtgtccaaacttatcggatcacct 464 ||||| || |||||||||| ||||||| | ||||| ||| ||| || || || || ||| Sbjct: 1196 agattggacatgagtgaatacatggagcgtcatactgtgagcaagctgataggctctcct 1255 Query: 465 ccaggttatgttggct 480 || ||||||||||||| Sbjct: 1256 cctggttatgttggct 1271
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ttaaagcagagactgaatcc 86 |||||||||||||||||||| Sbjct: 42872 ttaaagcagagactgaatcc 42891
>ref|XM_306750.2| Anopheles gambiae str. PEST ENSANGP00000013686 (ENSANGG00000011197), partial mRNA Length = 1611 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 331 caactggtgttggtaaatcagaattagc 358 ||||||||||||||||| ||||| |||| Sbjct: 932 caactggtgttggtaaaacagaactagc 959
>gb|U91327.1|HSU91327 Human chromosome 12p15 BAC clone CIT987SK-99D8 complete sequence Length = 129252 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 tgatgagattgaaaaggcac 561 |||||||||||||||||||| Sbjct: 106725 tgatgagattgaaaaggcac 106706
>gb|AC006924.3|AC006924 Homo sapiens, clone hRPK.32_A_1, complete sequence Length = 165633 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 catacacagttgttctctttgatg 546 |||| ||||||||||||||||||| Sbjct: 51269 cataaacagttgttctctttgatg 51292
>emb|Y11666.1|MMHEXII1 Mus musculus gene for hexokinase II, exon 1 (and joined CDS) Length = 6151 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ttaaagcagagactgaatcc 86 |||||||||||||||||||| Sbjct: 2064 ttaaagcagagactgaatcc 2045
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 531 gttgttctctttgatgagattgaaaaggcacatccagatgtctt 574 |||||||| ||||||| ||||||| |||||||||||| |||| Sbjct: 1994253 gttgttcttcttgatgaacttgaaaaagcacatccagatatctt 1994210
>gb|AY569019.1| Ekphymatodera thomasoni internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 1007 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aacacatcgtctcatcatgg 143 |||||||||||||||||||| Sbjct: 494 aacacatcgtctcatcatgg 475
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gggcaggatgaagctgtcaa 247 |||||||||||||||||||| Sbjct: 68875 gggcaggatgaagctgtcaa 68894
>gb|AC005773.1|AC005773 Homo sapiens chromosome 17, clone hRPK.534_P_15, complete sequence Length = 99036 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gctagcttcatattctctgg 328 |||||||||||||||||||| Sbjct: 83486 gctagcttcatattctctgg 83467
>gb|AF061279.1|AF061279 Plectonema boryanum heat shock protein (clpB) gene, complete cds Length = 2863 Score = 40.1 bits (20), Expect = 8.7 Identities = 74/92 (80%) Strand = Plus / Plus Query: 495 caactaacagaagcagttcgtcgccgtccatacacagttgttctctttgatgagattgaa 554 ||||| || ||||| |||||||| ||||| ||| | || |||| |||||||| || || Sbjct: 2141 caactcacggaagcggttcgtcgtcgtccttactcggtgattctgtttgatgaaatcgag 2200 Query: 555 aaggcacatccagatgtcttcaacatgatgct 586 || || ||||| ||||||||||| ||||||| Sbjct: 2201 aaagcccatcccgatgtcttcaatgtgatgct 2232 Score = 40.1 bits (20), Expect = 8.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 292 atccaaatcgacccattgctagcttcatattctctggaccaactggtgttggtaaa 347 |||||||||| || | ||||||||||| |||| |||||||| || ||||||||| Sbjct: 1938 atccaaatcgtccaacggctagcttcattttcttaggaccaacaggagttggtaaa 1993
>dbj|AB082174.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A1 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082172.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A713 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082171.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A712 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082169.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A404 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082166.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A304 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082165.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A303 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993
>dbj|AB082164.1| Hepatitis A virus gene for 2C protein, partial cds, strain:A301 Length = 1005 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 atatgagtgaattcatggag 431 |||||||||||||||||||| Sbjct: 974 atatgagtgaattcatggag 993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,111,439 Number of Sequences: 3902068 Number of extensions: 6111439 Number of successful extensions: 107599 Number of sequences better than 10.0: 295 Number of HSP's better than 10.0 without gapping: 286 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 105543 Number of HSP's gapped (non-prelim): 2026 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
