>CAC1B_DISOM (P56698) Probable voltage-dependent N-type calcium channel alpha-1B|
            subunit (Voltage-gated calcium channel alpha subunit
            Cav2.2) (DOE-4)
          Length = 2326

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = -3

Query: 564  GSCTNQSRQSMAMYCQSSEERAMLHKASMTPEILAT*PRPSLLWQIVLSKPTPAGEFSFT 385
            GS  +   QS +     S  R  L +  +TP       RPS+ ++   S P   G     
Sbjct: 2144 GSVNDSPLQSASGSSTPSRGRRQLPRTPLTP-------RPSVTYKTANSSPAHFGNLHDA 2196

Query: 384  SPPHIPGNLAR 352
             PP  PG L+R
Sbjct: 2197 LPPSSPGRLSR 2207

>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1|
           (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220)
          Length = 1600

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = -3

Query: 570 VPGSCTNQSRQSMAMYCQSSEERAMLHKASMTPEILAT*PRPSLLWQIVLSKPTPAGEFS 391
           +PG      + S+      S E    ++ S  P  LA    P L  ++ LSKP P  EFS
Sbjct: 285 IPGDTMTTIQMSVEESTPISRETGEPYRLSPEPTPLA---EPILEVEVTLSKPVPESEFS 341

Query: 390 FTSPPHIPGNLARNS 346
            +SP   P  LA ++
Sbjct: 342 -SSPLQAPTPLASHT 355

>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein|
           5.3) (Ultrahigh sulfur keratin-associated protein 5.3)
           (Keratin-associated protein 5-9) (Keratin-associated
           protein 5.9) (UHS KerB-like)
          Length = 238

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = +1

Query: 22  GGAKSCCQSFGAFGYIP*YIPCCC*SWRSA*TCNSTCLKLS 144
           GG+K  C S G       Y PCCC S   +  C S+C K S
Sbjct: 115 GGSKGGCGSCGC-SQCSCYKPCCCSSGCGSSCCQSSCCKPS 154

>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  GGAKSCCQSFGAFGYIP*YIPCCC*SWRSA*TCNSTCLK 138
           GG+K  C S G       Y PCCC S   +  C S+C K
Sbjct: 74  GGSKGGCGSCGC-SQCSCYKPCCCSSGCGSSCCQSSCCK 111

>KRA57_HUMAN (Q6L8G8) Keratin-associated protein 5-7 (Keratin-associated protein|
           5.7) (Ultrahigh sulfur keratin-associated protein 5.7)
           (Keratin-associated protein 5-3) (Keratin-associated
           protein 5.3)
          Length = 165

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +1

Query: 22  GGAKSCCQSFGAFGYIP*YIPCCC*SWRSA*TCNSTCLK 138
           GG+K  C S G       Y PCCC S   +  C S+C K
Sbjct: 81  GGSKGGCGSCGC-SQCSCYKPCCCSSGCGSSCCQSSCCK 118

>ARG13_NEUCR (Q01356) Amino acid transporter arg-13|
          Length = 363

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = -3

Query: 546 SRQSMAMYCQSSEERAMLHKASMTPEILAT*PRPSLLWQIVLSKPTPAGEFSF 388
           S+++ + + +   ERA+L + +   E++A+  RP  LWQ  ++  +    ++F
Sbjct: 226 SKETTSKWFRGRNERALLKRGASQEEVVASRERPLPLWQQAIAGASAGMSYNF 278

>NCOA2_RAT (Q9WUI9) Nuclear receptor coactivator 2 (NCoA-2) (Transcriptional|
           intermediary factor 2)
          Length = 1465

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 21/78 (26%), Positives = 34/78 (43%)
 Frame = -3

Query: 453 PRPSLLWQIVLSKPTPAGEFSFTSPPHIPGNLARNSGLQISWRNSGLNAKQFMSCKDQHC 274
           PR  +   +  S   P  +FS     H P  +  ++G   S+ NS LNA Q +S      
Sbjct: 488 PRHRMSPGVAGSPRVPPSQFSPAGSLHSPAGVCSSTGNSHSYTNSSLNALQALS------ 541

Query: 273 SWLAHSSALRDSISAPPI 220
               H  +L  S+++P +
Sbjct: 542 --EGHGVSLGPSLASPDL 557


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,998,590
Number of Sequences: 219361
Number of extensions: 1782290
Number of successful extensions: 4572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4571
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6370891296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)