ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags4p16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470938.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2721 Score = 226 bits (114), Expect = 6e-56 Identities = 300/362 (82%) Strand = Plus / Plus Query: 74 gtggtgtccagcctgggagacgacctccagaacgtgcgcaaggcagcgctcctcgacgcg 133 ||||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||||| Sbjct: 2182 gtggtgtccagcctgggcgacgacctgcagaacgtgcgcaaggcggcgagcttcgacgcg 2241 Query: 134 gacgcgctgaccatcacggtggcgagcctcgggcacagactggtgaaggcaaatgagttc 193 ||||||||||||||||||||||| ||||| |||||| | ||||| ||||| || |||||| Sbjct: 2242 gacgcgctgaccatcacggtggccagcctggggcaccggctggttaaggccaacgagttc 2301 Query: 194 ttgaacacgggcattaagagcctggaggaggagagcgggttccagcgcaagttggcccag 253 ||| ||||||||| |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 2302 ctgagcacgggcatgcgcagcctggaggaggacagcggcttccaacgccggctggcctcc 2361 Query: 254 ttcatagagcattcccagctgcaggtgacccacctgctggaggaggagaagaagctccgt 313 ||| | |||| || ||| ||||||||||| ||||||||||| ||||||| ||| || Sbjct: 2362 ttcgtgcagcagtcgcaggagcaggtgacccggctgctggaggatgagaagaggctgcgc 2421 Query: 314 ggtctggtgcgctccatcgtggattacttccacggcagcaccgggaaggatgagggcctg 373 ||||||||| ||| ||| || |||||||||||||||||||| ||||| || ||||| Sbjct: 2422 tccctggtgcgcgccaccgtcgactacttccacggcagcaccggcaaggacgaaggccta 2481 Query: 374 cgcctgttcgtggtcgtgcgcgacttcctggtgatactggagagggtgtgtagggaggtg 433 ||||| ||||| ||||||||||||||||| | || || || | |||||| ||||||||| Sbjct: 2482 cgcctcttcgtcgtcgtgcgcgacttcctcggcattctcgacaaggtgtgcagggaggtg 2541 Query: 434 aa 435 || Sbjct: 2542 aa 2543
>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete sequence Length = 139971 Score = 226 bits (114), Expect = 6e-56 Identities = 300/362 (82%) Strand = Plus / Plus Query: 74 gtggtgtccagcctgggagacgacctccagaacgtgcgcaaggcagcgctcctcgacgcg 133 ||||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||||| Sbjct: 51537 gtggtgtccagcctgggcgacgacctgcagaacgtgcgcaaggcggcgagcttcgacgcg 51596 Query: 134 gacgcgctgaccatcacggtggcgagcctcgggcacagactggtgaaggcaaatgagttc 193 ||||||||||||||||||||||| ||||| |||||| | ||||| ||||| || |||||| Sbjct: 51597 gacgcgctgaccatcacggtggccagcctggggcaccggctggttaaggccaacgagttc 51656 Query: 194 ttgaacacgggcattaagagcctggaggaggagagcgggttccagcgcaagttggcccag 253 ||| ||||||||| |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 51657 ctgagcacgggcatgcgcagcctggaggaggacagcggcttccaacgccggctggcctcc 51716 Query: 254 ttcatagagcattcccagctgcaggtgacccacctgctggaggaggagaagaagctccgt 313 ||| | |||| || ||| ||||||||||| ||||||||||| ||||||| ||| || Sbjct: 51717 ttcgtgcagcagtcgcaggagcaggtgacccggctgctggaggatgagaagaggctgcgc 51776 Query: 314 ggtctggtgcgctccatcgtggattacttccacggcagcaccgggaaggatgagggcctg 373 ||||||||| ||| ||| || |||||||||||||||||||| ||||| || ||||| Sbjct: 51777 tccctggtgcgcgccaccgtcgactacttccacggcagcaccggcaaggacgaaggccta 51836 Query: 374 cgcctgttcgtggtcgtgcgcgacttcctggtgatactggagagggtgtgtagggaggtg 433 ||||| ||||| ||||||||||||||||| | || || || | |||||| ||||||||| Sbjct: 51837 cgcctcttcgtcgtcgtgcgcgacttcctcggcattctcgacaaggtgtgcagggaggtg 51896 Query: 434 aa 435 || Sbjct: 51897 aa 51898
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 226 bits (114), Expect = 6e-56 Identities = 300/362 (82%) Strand = Plus / Plus Query: 74 gtggtgtccagcctgggagacgacctccagaacgtgcgcaaggcagcgctcctcgacgcg 133 ||||||||||||||||| |||||||| ||||||||||||||||| ||| | |||||||| Sbjct: 51537 gtggtgtccagcctgggcgacgacctgcagaacgtgcgcaaggcggcgagcttcgacgcg 51596 Query: 134 gacgcgctgaccatcacggtggcgagcctcgggcacagactggtgaaggcaaatgagttc 193 ||||||||||||||||||||||| ||||| |||||| | ||||| ||||| || |||||| Sbjct: 51597 gacgcgctgaccatcacggtggccagcctggggcaccggctggttaaggccaacgagttc 51656 Query: 194 ttgaacacgggcattaagagcctggaggaggagagcgggttccagcgcaagttggcccag 253 ||| ||||||||| |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 51657 ctgagcacgggcatgcgcagcctggaggaggacagcggcttccaacgccggctggcctcc 51716 Query: 254 ttcatagagcattcccagctgcaggtgacccacctgctggaggaggagaagaagctccgt 313 ||| | |||| || ||| ||||||||||| ||||||||||| ||||||| ||| || Sbjct: 51717 ttcgtgcagcagtcgcaggagcaggtgacccggctgctggaggatgagaagaggctgcgc 51776 Query: 314 ggtctggtgcgctccatcgtggattacttccacggcagcaccgggaaggatgagggcctg 373 ||||||||| ||| ||| || |||||||||||||||||||| ||||| || ||||| Sbjct: 51777 tccctggtgcgcgccaccgtcgactacttccacggcagcaccggcaaggacgaaggccta 51836 Query: 374 cgcctgttcgtggtcgtgcgcgacttcctggtgatactggagagggtgtgtagggaggtg 433 ||||| ||||| ||||||||||||||||| | || || || | |||||| ||||||||| Sbjct: 51837 cgcctcttcgtcgtcgtgcgcgacttcctcggcattctcgacaaggtgtgcagggaggtg 51896 Query: 434 aa 435 || Sbjct: 51897 aa 51898 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 395 gacttcctggtgatactggagagggtgtgtagggaggtga 434 |||||||||| ||| |||||||||||||| | |||||||| Sbjct: 23053243 gacttcctggggatgctggagagggtgtgcaaggaggtga 23053204 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 gccgccgctgccaacaagaa 471 |||||||||||||||||||| Sbjct: 25211688 gccgccgctgccaacaagaa 25211669
>gb|AY109243.1| Zea mays PCO082821 mRNA sequence Length = 609 Score = 212 bits (107), Expect = 9e-52 Identities = 305/371 (82%) Strand = Plus / Minus Query: 104 aacgtgcgcaaggcagcgctcctcgacgcggacgcgctgaccatcacggtggcgagcctc 163 |||||||| ||||| || |||| ||| | || |||||||||||| ||||||||||||| Sbjct: 609 aacgtgcggaaggcggcaatcctggaccccgatgcgctgaccatctcggtggcgagcctg 550 Query: 164 gggcacagactggtgaaggcaaatgagttcttgaacacgggcattaagagcctggaggag 223 ||||||| ||||||||||| || |||||| ||||||||||||| |||||| | || ||| Sbjct: 549 gggcacaagctggtgaaggcgaacgagttcctgaacacgggcatgaagagcttagacgag 490 Query: 224 gagagcgggttccagcgcaagttggcccagttcatagagcattcccagctgcaggtgacc 283 || || |||||||| |||||| | | | ||||||| ||||| |||||| ||| |||||| Sbjct: 489 gacagtgggttccatcgcaagcttggcgagttcatcgagcagtcccaggtgcgcgtgacc 430 Query: 284 cacctgctggaggaggagaagaagctccgtggtctggtgcgctccatcgtggattacttc 343 || || ||||||||||| |||||||| || | ||||| ||| | | || || |||||| Sbjct: 429 cagcttctggaggaggaaaagaagctacgggcgctggtacgcacaactgtagactacttc 370 Query: 344 cacggcagcaccgggaaggatgagggcctgcgcctgttcgtggtcgtgcgcgacttcctg 403 || || ||||| ||||| |||||||||||||| |||||||| || || |||||||||||| Sbjct: 369 catgggagcacggggaaagatgagggcctgcggctgttcgtcgttgtccgcgacttcctg 310 Query: 404 gtgatactggagagggtgtgtagggaggtgaaagaggcggccgccaaagccgccgctgcc 463 | ||| ||||| | |||||| || ||||||||||||||||| ||||| || || ||| Sbjct: 309 gggatcctggacaaggtgtgcagagaggtgaaagaggcggctgccaaggctgctgctaat 250 Query: 464 aacaagaaacc 474 ||||||||||| Sbjct: 249 aacaagaaacc 239
>ref|XM_472757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2502 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 395 gacttcctggtgatactggagagggtgtgtagggaggtga 434 |||||||||| ||| |||||||||||||| | |||||||| Sbjct: 2407 gacttcctggggatgctggagagggtgtgcaaggaggtga 2446
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 395 gacttcctggtgatactggagagggtgtgtagggaggtga 434 |||||||||| ||| |||||||||||||| | |||||||| Sbjct: 49573 gacttcctggggatgctggagagggtgtgcaaggaggtga 49534
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 395 gacttcctggtgatactggagagggtgtgtagggaggtga 434 |||||||||| ||| |||||||||||||| | |||||||| Sbjct: 147660 gacttcctggggatgctggagagggtgtgcaaggaggtga 147621
>dbj|AK106770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F08, full insert sequence Length = 2771 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 395 gacttcctggtgatactggagagggtgtgtagggaggtga 434 |||||||||| ||| |||||||||||||| | |||||||| Sbjct: 2519 gacttcctggggatgctggagagggtgtgcaaggaggtga 2558
>ref|XM_514149.1| PREDICTED: Pan troglodytes similar to Rpl7a protein (LOC457681), mRNA Length = 1816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 659 cgccaaagccgccgctgccaa 679
>ref|NM_031437.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 4, mRNA Length = 3498 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>ref|NM_182663.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 1, mRNA Length = 2048 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>ref|NM_182664.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5 (RASSF5), transcript variant 2, mRNA Length = 1932 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>gb|BC007203.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5, transcript variant 4, mRNA (cDNA clone MGC:12957 IMAGE:2967057), complete cds Length = 3498 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 ccgccaaagccgccgctgcca 464 ||||||||||||||||||||| Sbjct: 2534432 ccgccaaagccgccgctgcca 2534412
>emb|BX323045.14| Zebrafish DNA sequence from clone CH211-248I1 in linkage group 11, complete sequence Length = 104629 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 catcacggtggcgagcctcgg 165 ||||||||||||||||||||| Sbjct: 41941 catcacggtggcgagcctcgg 41921
>gb|AC091754.4| Papio anubis clone RP41-384C24, complete sequence Length = 192273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 ctgctggaggaggagaagaag 307 ||||||||||||||||||||| Sbjct: 83461 ctgctggaggaggagaagaag 83481
>emb|AL354681.8| Human DNA sequence from clone RP11-534L20 on chromosome 1 Contains the IKBKE gene for inhibitor of kappa light polypeptide gene enhancer in B-cells kinase epsilon, a novel gene, the 5' end of the RASSF5 gene for Ras association (RalGDS/AF-6) domain family 5, a ribosomal protein L7a (RPL7A) pseudogene and a CpG island, complete sequence Length = 107689 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 41199 cgccaaagccgccgctgccaa 41219
>gb|BC030764.1| Homo sapiens cDNA clone IMAGE:4801360 Length = 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 agaagctccgtggtctggtgc 323 ||||||||||||||||||||| Sbjct: 460 agaagctccgtggtctggtgc 440
>gb|BC004270.1| Homo sapiens Ras association (RalGDS/AF-6) domain family 5, transcript variant 4, mRNA (cDNA clone MGC:10823 IMAGE:3613993), complete cds Length = 3498 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>gb|AC005629.2| Homo sapiens PAC clone RP5-1093I16 from 1, complete sequence Length = 105643 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 agaagctccgtggtctggtgc 323 ||||||||||||||||||||| Sbjct: 22311 agaagctccgtggtctggtgc 22331
>gb|AY062003.1| Homo sapiens putative tumor suppressor RASSF3 isoform B (RASSF3) mRNA, complete cds; alternatively spliced Length = 1932 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>gb|AY062002.1| Homo sapiens putative tumor suppressor RASSF3 isoform A (RASSF3) mRNA, complete cds; alternatively spliced Length = 2048 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 cgccaaagccgccgctgccaa 465 ||||||||||||||||||||| Sbjct: 16 cgccaaagccgccgctgccaa 36
>emb|BX279524.5| Zebrafish DNA sequence from clone DKEY-35H11 in linkage group 11, complete sequence Length = 157440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 catcacggtggcgagcctcgg 165 ||||||||||||||||||||| Sbjct: 149431 catcacggtggcgagcctcgg 149411
>gb|AC145614.3| Homo sapiens chromosome UNKNOWN clone RP11-1210E1, complete sequence Length = 188052 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 agaagctccgtggtctggtgc 323 ||||||||||||||||||||| Sbjct: 117342 agaagctccgtggtctggtgc 117362
>gb|AC144898.3| Homo sapiens chromosome UNKNOWN clone RP11-247L13, complete sequence Length = 155112 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 agaagctccgtggtctggtgc 323 ||||||||||||||||||||| Sbjct: 80256 agaagctccgtggtctggtgc 80276
>ref|XM_369756.1| Magnaporthe grisea 70-15 hypothetical protein (MG06271.4) partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tcacggtggcgagcctcggg 166 |||||||||||||||||||| Sbjct: 526 tcacggtggcgagcctcggg 507
>emb|AJ884584.1| Sporisorium reilianum Fot1 family transposon nat1 gene (partial), c1d1 gene (partial), bW2 gene and bE2 gene Length = 8963 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 808 gctggaggaggagaagaagc 827
>emb|AJ884583.1| Sporisorium reilianum Fot1 family transposon, nat1 gene (partial), c1d1 gene (partial), bW1 gene and bE1 gene Length = 8967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 808 gctggaggaggagaagaagc 827
>emb|CR643219.2|CNS0EVA1 Tetraodon nigroviridis full-length cDNA Length = 1988 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 477 gctggaggaggagaagaagc 496
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gcggccgccaaagccgccgc 459 |||||||||||||||||||| Sbjct: 90078 gcggccgccaaagccgccgc 90097
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 gcggccgccaaagccgccgc 459 |||||||||||||||||||| Sbjct: 8520 gcggccgccaaagccgccgc 8539
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 gcggccgccaaagccgccgc 459 |||||||||||||||||||| Sbjct: 339807 gcggccgccaaagccgccgc 339788
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 gccgccgctgccaacaagaa 471 |||||||||||||||||||| Sbjct: 93355 gccgccgctgccaacaagaa 93336
>gb|AC060234.11| Homo sapiens chromosome 10 clone RP11-523O18, complete sequence Length = 170073 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cccacctgctggaggaggag 301 |||||||||||||||||||| Sbjct: 87425 cccacctgctggaggaggag 87444
>gb|AC026775.6| Homo sapiens chromosome 5 clone CTC-244L19, complete sequence Length = 196826 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ctacaagcagctgggcctca 71 |||||||||||||||||||| Sbjct: 90421 ctacaagcagctgggcctca 90402
>ref|XM_685757.1| PREDICTED: Danio rerio similar to LOC398473 protein (LOC562365), mRNA Length = 870 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 714 gctggaggaggagaagaagc 733
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 tgagggcctgcgcctgttcg 383 |||||||||||||||||||| Sbjct: 1500267 tgagggcctgcgcctgttcg 1500248
>dbj|AP006506.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-284M8, complete sequence Length = 255195 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cctggaggaggagagcgggt 233 |||||||||||||||||||| Sbjct: 175159 cctggaggaggagagcgggt 175178
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 actggtgaaggcaaatgagt 191 |||||||||||||||||||| Sbjct: 1349190 actggtgaaggcaaatgagt 1349171
>gb|AF107563.1|MUSPEX1 Mus musculus Cast (Cast) and peroxisomal membrane anchor protein (Pex14) genes, partial sequence Length = 53094 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cctggaggaggagagcgggt 233 |||||||||||||||||||| Sbjct: 19765 cctggaggaggagagcgggt 19746
>gb|AC138832.2| Homo sapiens chromosome 5 clone RP11-1174L13, complete sequence Length = 225384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ctacaagcagctgggcctca 71 |||||||||||||||||||| Sbjct: 214578 ctacaagcagctgggcctca 214559
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tgctggaggaggagaagaagctcc 311 |||||||||||| ||||||||||| Sbjct: 2250103 tgctggaggaggcgaagaagctcc 2250080
>ref|XM_343114.2| PREDICTED: Rattus norvegicus kinesin 2 (Kns2), mRNA Length = 2449 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 585 gctggaggaggagaagaagc 604
>emb|AL607145.28| Mouse DNA sequence from clone RP23-230I5 on chromosome 4, complete sequence Length = 147896 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 cctggaggaggagagcgggt 233 |||||||||||||||||||| Sbjct: 138667 cctggaggaggagagcgggt 138648
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 gccgccaaagccgccgctgc 462 |||||||||||||||||||| Sbjct: 101843 gccgccaaagccgccgctgc 101862
>gb|M75148.1|RATKINLC Rat kinesin light chain C mRNA Length = 2386 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 540 gctggaggaggagaagaagc 559
>gb|M75147.1|RATKINLB Rat kinesin light chain B mRNA Length = 1917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 554 gctggaggaggagaagaagc 573
>gb|M75146.1|RATKINLA Rat kinesin light chain A mRNA Length = 2308 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gctggaggaggagaagaagc 308 |||||||||||||||||||| Sbjct: 531 gctggaggaggagaagaagc 550
>dbj|AB050050.1| Homo sapiens MCCB gene for non-biotin containing subunit of 3-methylcrotonyl CoA carboxylase, complete cds Length = 74640 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ctacaagcagctgggcctca 71 |||||||||||||||||||| Sbjct: 17633 ctacaagcagctgggcctca 17614 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,164,807 Number of Sequences: 3902068 Number of extensions: 5164807 Number of successful extensions: 145997 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145507 Number of HSP's gapped (non-prelim): 481 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
