ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5e22 |
|---|---|
| Clone Library Name | barley_pub |
>YDGH_BACSU (P96706) Putative membrane protein ydgH| Length = 885 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +1 Query: 43 DLKHLKHISLPARLIICKCLLIVIGLIVLRAIISPFLAISLSEKSFYESPTL 198 D H L +I CL+I + LIV R++++PF+ I + S+ S ++ Sbjct: 161 DFAHSSEEGLKKTEVITVCLIIGLLLIVFRSVVTPFIPIVVVGFSYLISQSI 212
>RPOB2_METTW (P09844) DNA-directed RNA polymerase subunit B'' (EC 2.7.7.6)| Length = 515 Score = 29.6 bits (65), Expect = 7.0 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = +1 Query: 388 FDKVFDLNKFNAHCHGFVRVARYSEVSNRTEPFKLQKGSGRRWTVERDLDQLQQSRLGEA 567 FDK +DL + H + R E+ + +EP +L++G ++TVE +++ + EA Sbjct: 13 FDK-YDLVDHHIHSYNDFVSNRIQEIIDTSEPIELEQG---QYTVETGKVTIEKPFIKEA 68 Query: 568 DG 573 DG Sbjct: 69 DG 70
>ALR_LACRE (Q9FCV2) Alanine racemase (EC 5.1.1.1)| Length = 375 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = +1 Query: 358 KEVDLLQPIAFDKVFDLNKFNAHCHGFVRVARYSEVSNRT 477 KE++ L P + ++F + K N + HG + VARY+E + T Sbjct: 24 KEIERLDPQS--ELFAVVKANGYGHGLIPVARYTEQAGAT 61
>ADRB2_RAT (P10608) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 418 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87
>ADRB2_PIG (Q28997) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 418 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87
>ADRB2_MESAU (P04274) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 418 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87
>ADRB2_BOVIN (Q28044) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 418 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87
>ADRB2_HUMAN (P07550) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 413 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87
>ADRB2_MACMU (Q28509) Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2| adrenoreceptor) Length = 415 Score = 29.3 bits (64), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 504 TALLKFERLGTIRNF*IPSYPYKPMTMGIELI 409 TA+ KFERL T+ N+ I S + MG+ ++ Sbjct: 56 TAIAKFERLQTVTNYFITSLACADLVMGLAVV 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,504,569 Number of Sequences: 219361 Number of extensions: 1823085 Number of successful extensions: 4913 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 4822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4913 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
