ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5e22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_506728.1| PREDICTED Oryza sativa (japonica cultivar-group... 345 1e-91
2ref|XM_464259.1| Oryza sativa (japonica cultivar-group), mRNA 345 1e-91
3emb|AJ831493.1| Oryza sativa mRNA for protein-O-fucosyltransfera... 345 1e-91
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 345 1e-91
5dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 345 1e-91
6dbj|AK073486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
7dbj|AK073338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
8emb|AJ831494.1| Saccharum officinarum mRNA for protein-O-fucosyl... 313 4e-82
9emb|AJ579857.1|TAE579857 Triticum aestivum partial mRNA for GDP-... 230 4e-57
10ref|NM_111405.2| Arabidopsis thaliana unknown protein AT3G05320 ... 64 6e-07
11gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 64 6e-07
12gb|BT002034.1| Arabidopsis thaliana unknown protein (At3g05320) ... 64 6e-07
13gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, comp... 42 2.1
14gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, co... 42 2.1
15gb|AC161210.5| Mus musculus chromosome 3, clone RP23-71N6, compl... 42 2.1
16gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome... 42 2.1
17gb|AC093690.5| Homo sapiens BAC clone RP11-731I19 from 2, comple... 42 2.1
18gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosom... 42 2.1
19gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 8.2
20gb|AC126607.7| Mus musculus chromosome 6, clone RP24-113M16, com... 40 8.2
21gb|AC121893.3| Mus musculus BAC clone RP24-157C12 from chromosom... 40 8.2
22gb|AC166548.2| Nectria haematococca clone JGIAYWI-9B5, complete ... 40 8.2
23emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chr... 40 8.2
24emb|AL159980.14| Human DNA sequence from clone RP11-56M2 on chro... 40 8.2
25gb|AC015954.9| Homo sapiens chromosome 18, clone RP11-24L5, comp... 40 8.2
26gb|AC104996.4| Homo sapiens chromosome 17, clone RP11-1148O4, co... 40 8.2
27gb|AC158167.5| Mus musculus BAC clone RP23-432K4 from chromosome... 40 8.2

>ref|XM_506728.1| PREDICTED Oryza sativa (japonica cultivar-group), P0669G09.11 mRNA
          Length = 2109

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                        
Query: 222  aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
            |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 684  aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 743

                                                                        
Query: 282  tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
            |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 744  tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 803

                                                                        
Query: 342  tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
            |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 804  tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 863

                                                                        
Query: 402  tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
            |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 864  tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 923

                                                                        
Query: 462  agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
            |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 924  agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 983

                              
Query: 522  ggagagagacttggatca 539
            ||||| ||||||||||||
Sbjct: 984  ggagaaagacttggatca 1001



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
           ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 486 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 545

                                                     
Query: 84  tattatttgcaagtgccttctcatagtgattggccttattgt 125
           | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 546 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 587



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>ref|XM_464259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2042

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
           |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 617 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 676

                                                                       
Query: 282 tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
           |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 677 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 736

                                                                       
Query: 342 tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
           |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 737 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 796

                                                                       
Query: 402 tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
           |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 797 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 856

                                                                       
Query: 462 agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
           |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 857 agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 916

                             
Query: 522 ggagagagacttggatca 539
           ||||| ||||||||||||
Sbjct: 917 ggagaaagacttggatca 934



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
           ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 419 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 478

                                                     
Query: 84  tattatttgcaagtgccttctcatagtgattggccttattgt 125
           | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 479 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 520



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>emb|AJ831493.1| Oryza sativa mRNA for protein-O-fucosyltransferase 1 (fut12 gene)
          Length = 1326

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
           |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 195 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 254

                                                                       
Query: 282 tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
           |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 255 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 314

                                                                       
Query: 342 tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
           |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 315 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 374

                                                                       
Query: 402 tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
           |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 375 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 434

                                                                       
Query: 462 agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
           |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 435 agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 494

                             
Query: 522 ggagagagacttggatca 539
           ||||| ||||||||||||
Sbjct: 495 ggagaaagacttggatca 512



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                       
Query: 28  atgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggcttatt 87
           ||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| | | 
Sbjct: 1   atgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcctgtc 60

                                                 
Query: 88  atttgcaagtgccttctcatagtgattggccttattgt 125
            |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 61  gtttgcaaaggcctttttatagtgattgcgcttattgt 98



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                           
Query: 222     aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
               |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3703909 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 3703968

                                                                           
Query: 282     tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
               |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 3703969 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 3704028

                                                                           
Query: 342     tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
               |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 3704029 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 3704088

                                                                           
Query: 402     tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
               |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 3704089 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 3704148

                                                                           
Query: 462     agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
               |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 3704149 agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 3704208

                                 
Query: 522     ggagagagacttggatca 539
               ||||| ||||||||||||
Sbjct: 3704209 ggagaaagacttggatca 3704226



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                           
Query: 24      ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
               ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 3703711 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 3703770

                                                         
Query: 84      tattatttgcaagtgccttctcatagtgattggccttattgt 125
               | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 3703771 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 3703812



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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                         
Query: 222   aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
             |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 44226 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 44285

                                                                         
Query: 282   tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
             |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 44286 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 44345

                                                                         
Query: 342   tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
             |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 44346 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 44405

                                                                         
Query: 402   tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
             |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 44406 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 44465

                                                                         
Query: 462   agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
             |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 44466 agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 44525

                               
Query: 522   ggagagagacttggatca 539
             ||||| ||||||||||||
Sbjct: 44526 ggagaaagacttggatca 44543



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                         
Query: 24    ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
             ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 44028 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 44087

                                                       
Query: 84    tattatttgcaagtgccttctcatagtgattggccttattgt 125
             | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 44088 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 44129



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>dbj|AK073486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043N20, full
           insert sequence
          Length = 2038

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                       
Query: 222 aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
           |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 613 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 672

                                                                       
Query: 282 tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
           |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 673 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 732

                                                                       
Query: 342 tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
           |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 733 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 792

                                                                       
Query: 402 tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
           |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 793 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 852

                                                                       
Query: 462 agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
           |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 853 agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 912

                             
Query: 522 ggagagagacttggatca 539
           ||||| ||||||||||||
Sbjct: 913 ggagaaagacttggatca 930



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
           ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 415 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 474

                                                     
Query: 84  tattatttgcaagtgccttctcatagtgattggccttattgt 125
           | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 475 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 516



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>dbj|AK073338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029D16, full
            insert sequence
          Length = 2108

 Score =  345 bits (174), Expect = 1e-91
 Identities = 282/318 (88%)
 Strand = Plus / Plus

                                                                        
Query: 222  aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
            |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 683  aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 742

                                                                        
Query: 282  tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
            |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 743  tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 802

                                                                        
Query: 342  tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
            |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 803  tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 862

                                                                        
Query: 402  tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
            |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 863  tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 922

                                                                        
Query: 462  agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
            |||||| ||||  ||| ||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 923  agtttctaatcaaaccaagcctttcaaactccaaaagggaagtggtaggaggtggaccgt 982

                              
Query: 522  ggagagagacttggatca 539
            ||||| ||||||||||||
Sbjct: 983  ggagaaagacttggatca 1000



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  ttcaatgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggct 83
           ||||||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| 
Sbjct: 485 ttcaatgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcc 544

                                                     
Query: 84  tattatttgcaagtgccttctcatagtgattggccttattgt 125
           | |  |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 545 tgtcgtttgcaaaggcctttttatagtgattgcgcttattgt 586



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>emb|AJ831494.1| Saccharum officinarum mRNA for protein-O-fucosyltransferase 1 (fut12
            gene)
          Length = 2624

 Score =  313 bits (158), Expect = 4e-82
 Identities = 290/334 (86%)
 Strand = Plus / Plus

                                                                        
Query: 222  aggcaagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatt 281
            |||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1150 aggcaagttcattgaggttccacagattatatggggattgaacaatcagaagattgcgtt 1209

                                                                        
Query: 282  tgccagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgag 341
            |||||| || |||||||| || |||||||||||||| ||||| |||||||| ||| ||||
Sbjct: 1210 tgccagggcgtgcttgactgcgagattcctgaaccggtctctgctcatgcctagtttgag 1269

                                                                        
Query: 342  tgcttcgcttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatt 401
            |||||||||||||||||||||||||||||||||||  || ||  ||||||||||||| ||
Sbjct: 1270 tgcttcgcttttctacaaagaggttgacttgctgcgaccaatcactttcgacaaggtgtt 1329

                                                                        
Query: 402  tgaccttaataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcaga 461
            |||| |||  |||||||| |||| ||| || ||||| |||||| ||||||| ||||||||
Sbjct: 1330 tgactttaccaagttcaacgcccgttgccaggggttcgtaaggttagctcgctattcaga 1389

                                                                        
Query: 462  agtttcgaatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagt 521
            |||||| ||||  ||| ||||||||||||| |||||||| | |||||| |||||||| | 
Sbjct: 1390 agtttctaatcaaaccaagcctttcaaactccaaaagggaactggtagaaggtggaccgc 1449

                                              
Query: 522  ggagagagacttggatcaactgcagcaatccaga 555
             || | ||||||||||||||| || |||| ||||
Sbjct: 1450 agacaaagacttggatcaactacaacaatacaga 1483



 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                       
Query: 225 caagtttgttgaggtcccacagattatatggggattgaacaatcagaagattgcatttgc 284
           ||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| ||
Sbjct: 791 caagtttcttgaggtcccacagatcatatgggggttgaacaatcaaaagattgcattcgc 850

                                                                       
Query: 285 cagagcatgcttgacggcaagattcctgaaccgttctctactcatgccaagtctgagtgc 344
           ||||||||||||||| ||||||||||||||| | || || |||||||||||  |||||||
Sbjct: 851 cagagcatgcttgactgcaagattcctgaacagatcccttctcatgccaagcttgagtgc 910

                                        
Query: 345 ttcgcttttctacaaagaggttgacttgc 373
           ||| || ||||||||||||||||||||||
Sbjct: 911 ttcactcttctacaaagaggttgacttgc 939



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 79/98 (80%)
 Strand = Plus / Plus

                                                                        
Query: 28   atgaacatcctactagaccttaagcatctcaagcacattagcttgccggcgaggcttatt 87
            ||||||||| ||||||| || || |||||||||||  | ||||||||| || ||| | | 
Sbjct: 956  atgaacatcatactagaactcaaccatctcaagcaggtcagcttgccgacgcggcctgtc 1015

                                                  
Query: 88   atttgcaagtgccttctcatagtgattggccttattgt 125
             |||||||  ||||| | ||||||||||  ||||||||
Sbjct: 1016 gtttgcaaaggcctttttatagtgattgcgcttattgt 1053



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>emb|AJ579857.1|TAE579857 Triticum aestivum partial mRNA for GDP-fucose
           protein-O-fucosyltransferase 1 (fut12 gene)
          Length = 1685

 Score =  230 bits (116), Expect = 4e-57
 Identities = 221/256 (86%)
 Strand = Plus / Plus

                                                                       
Query: 349 cttttctacaaagaggttgacttgctgcagcctattgctttcgacaaggtatttgacctt 408
           ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| | 
Sbjct: 15  cttttttacaaagaggttgacttgctgcagcctattcctttcgacaaggtgtttgacttc 74

                                                                       
Query: 409 aataagttcaatgcccattgtcatgggtttgtaagggtagctcggtattcagaagtttcg 468
           |  || |||||||| |  ||||||||||||| |||| |||||||||| || || ||||||
Sbjct: 75  accaaattcaatgcacgctgtcatgggtttgcaaggctagctcggtactccgaggtttcg 134

                                                                       
Query: 469 aatcgtaccgagcctttcaaacttcaaaagggcagtggtaggaggtggacagtggagaga 528
           |||| ||| ||||| |  ||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 135 aatcatactgagccctataaactacaaaagggaagtggtaggaggtggacagtggagaga 194

                                                                       
Query: 529 gacttggatcaactgcagcaatccagattgggggaggccgatggctttgaagtgattcat 588
           ||||||||||| ||||| || |||| |  ||| || |||||||||| | |||| ||||||
Sbjct: 195 gacttggatcagctgcaacagtccaaaacgggtgaagccgatggctatcaagtaattcat 254

                           
Query: 589 gtcactgggaagcatc 604
           ||||||||||| ||||
Sbjct: 255 gtcactgggaaacatc 270



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>ref|NM_111405.2| Arabidopsis thaliana unknown protein AT3G05320 mRNA, complete cds
          Length = 1233

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 253 tggggattgaacaatcagaagattgcatttgccagagcatgcttgacggcaagattcctg 312
           |||||| | |||||||||||||| || ||||| ||||| ||||||||||||||| |  ||
Sbjct: 16  tggggactaaacaatcagaagatagcttttgctagagcttgcttgacggcaagaatgatg 75

                                                                   
Query: 313 aaccgttctctactcatgccaagtctgagtgcttcgcttttctacaaagaggttga 368
           ||| |  | || |||||||| ||||| ||||||||  | |||||||| || |||||
Sbjct: 76  aacagaacgcttctcatgcctagtctaagtgcttccttgttctacaaggaagttga 131



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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete
              sequence
          Length = 140064

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                          
Query: 253    tggggattgaacaatcagaagattgcatttgccagagcatgcttgacggcaagattcctg 312
              |||||| | |||||||||||||| || ||||| ||||| ||||||||||||||| |  ||
Sbjct: 110668 tggggactaaacaatcagaagatagcttttgctagagcttgcttgacggcaagaatgatg 110609

                                                                      
Query: 313    aaccgttctctactcatgccaagtctgagtgcttcgcttttctacaaagaggttga 368
              ||| |  | || |||||||| ||||| ||||||||  | |||||||| || |||||
Sbjct: 110608 aacagaacgcttctcatgcctagtctaagtgcttccttgttctacaaggaagttga 110553



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>gb|BT002034.1| Arabidopsis thaliana unknown protein (At3g05320) mRNA, complete cds
          Length = 1234

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 253 tggggattgaacaatcagaagattgcatttgccagagcatgcttgacggcaagattcctg 312
           |||||| | |||||||||||||| || ||||| ||||| ||||||||||||||| |  ||
Sbjct: 16  tggggactaaacaatcagaagatagcttttgctagagcttgcttgacggcaagaatgatg 75

                                                                   
Query: 313 aaccgttctctactcatgccaagtctgagtgcttcgcttttctacaaagaggttga 368
           ||| |  | || |||||||| ||||| ||||||||  | |||||||| || |||||
Sbjct: 76  aacagaacgcttctcatgcctagtctaagtgcttccttgttctacaaggaagttga 131



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>gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, complete sequence
          Length = 203962

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 11     attaaagaactgtttcaatgaacat 35
              |||||||||||||| ||||||||||
Sbjct: 142648 attaaagaactgttacaatgaacat 142672



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>gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, complete sequence
          Length = 171669

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 207    ccctggagttaggaaaggcaagttt 231
              |||||||||||||||| ||||||||
Sbjct: 103145 ccctggagttaggaaatgcaagttt 103169



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>gb|AC161210.5| Mus musculus chromosome 3, clone RP23-71N6, complete sequence
          Length = 158006

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 207    ccctggagttaggaaaggcaagttt 231
              |||||||||||||||| ||||||||
Sbjct: 129703 ccctggagttaggaaatgcaagttt 129679



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>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence
          Length = 169842

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     gtgagaaggaattaaagaactgttt 25
             |||||||||||||||||||| ||||
Sbjct: 67060 gtgagaaggaattaaagaacagttt 67084



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>gb|AC093690.5| Homo sapiens BAC clone RP11-731I19 from 2, complete sequence
          Length = 201467

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 480   gcctttcaaacttcaaaaggg 500
             |||||||||||||||||||||
Sbjct: 29937 gcctttcaaacttcaaaaggg 29917



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>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence
          Length = 213367

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1      gtgagaaggaattaaagaactgttt 25
              |||||||||||||||||||| ||||
Sbjct: 206172 gtgagaaggaattaaagaacagttt 206196



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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 330     gccaagtctgagtgcttcgc 349
               ||||||||||||||||||||
Sbjct: 3715267 gccaagtctgagtgcttcgc 3715248



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>gb|AC126607.7| Mus musculus chromosome 6, clone RP24-113M16, complete sequence
          Length = 171856

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ttcaaacttcaaaagggcag 503
             ||||||||||||||||||||
Sbjct: 57010 ttcaaacttcaaaagggcag 56991



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>gb|AC121893.3| Mus musculus BAC clone RP24-157C12 from chromosome 16, complete sequence
          Length = 137384

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    cagtggagagagacttggat 537
              ||||||||||||||||||||
Sbjct: 136532 cagtggagagagacttggat 136551



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>gb|AC166548.2| Nectria haematococca clone JGIAYWI-9B5, complete sequence
          Length = 41007

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   catgcttgacggcaagattc 309
             ||||||||||||||||||||
Sbjct: 25725 catgcttgacggcaagattc 25744



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>emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chromosome 1 Contains the
             5' end of the CASQ2 gene for calsequestrin 2 (cardiac
             muscle), the NHLH2 gene for nescient helix loop helix 2, a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene and two CpG islands, complete sequence
          Length = 164655

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    tgccttctcatagtgattgg 116
             ||||||||||||||||||||
Sbjct: 85835 tgccttctcatagtgattgg 85816



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>emb|AL159980.14| Human DNA sequence from clone RP11-56M2 on chromosome 13 Contains a
             histone pseudogene, complete sequence
          Length = 162044

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   ttgaacaatcagaagattgcattt 282
             ||||||||| ||||||||||||||
Sbjct: 94097 ttgaacaataagaagattgcattt 94120



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>gb|AC015954.9| Homo sapiens chromosome 18, clone RP11-24L5, complete sequence
          Length = 180507

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   aagggcagtggtaggaggtg 515
             ||||||||||||||||||||
Sbjct: 92479 aagggcagtggtaggaggtg 92460



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>gb|AC104996.4| Homo sapiens chromosome 17, clone RP11-1148O4, complete sequence
          Length = 155848

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 494    aaaagggcagtggtaggaggtgga 517
              ||||||||||| ||||||||||||
Sbjct: 101812 aaaagggcagttgtaggaggtgga 101789



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>gb|AC158167.5| Mus musculus BAC clone RP23-432K4 from chromosome 16, complete
            sequence
          Length = 43409

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  cagtggagagagacttggat 537
            ||||||||||||||||||||
Sbjct: 1148 cagtggagagagacttggat 1167


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,060,144
Number of Sequences: 3902068
Number of extensions: 5060144
Number of successful extensions: 114155
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114051
Number of HSP's gapped (non-prelim): 104
length of query: 604
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 581
effective length of database: 17,143,297,704
effective search space: 9960255966024
effective search space used: 9960255966024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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