ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bags5e16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107290.1| Zea mays PCO063868 mRNA sequence Length = 1381 Score = 682 bits (344), Expect = 0.0 Identities = 567/640 (88%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 220 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 278 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 ||| ||||| ||||||||||||||| |||||| || ||||| || |||||| ||||| | Sbjct: 279 ggaacaggtttcaaggcatcgtacaatcatgaatatttttgagaaagagccaaggatcca 338 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 | |||||| |||||||| ||||||||| | |||||||| |||||||||||||| ||||| Sbjct: 339 tagagatgtgtttgttgctcccagtgcagcagtcattggggatgttgagattggtcatgg 398 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| ||||||||||| || ||| | |||||||||||||||||||| |||| ||||||||| Sbjct: 399 atcgtcaatctggtacggatccatattgagaggtgatgtcaacagcattcatattggatc 458 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 ||| || |||||||| ||||| ||||||||||||||| |||| ||| |||||| ||||| Sbjct: 459 tggttctaatatacaagacaattcccttgtacatgtttcaaaagctaacattagcgggaa 518 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 |||||| || || || |||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 519 ggtcctcccaaccataattggaagcaacgtgacagtgggtcacagtgctgtattacatgc 578 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 579 atgtaccattgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 638 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 639 agttgaaaagcacagcatggttggtgcaggatctcttgttaagcagaatacaaggattcc 698 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 699 ttctggagaggtctgggtcggtaatcctgccaagttcctaaggaagcttacagaagagga 758 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | |||||||| ||||| ||| ||||||| |||||| |||| || || ||||| | Sbjct: 759 gattgcgttcatcgctcaatcagcaaccaactatatcaacctagcccaggtccatgcagc 818 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 ||||| |||||||||||||||||||||||||||||||| Sbjct: 819 cgagaacgccaagagcttcgacgagattgagctcgagaag 858
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence Length = 1166 Score = 674 bits (340), Expect = 0.0 Identities = 566/640 (88%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 32 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 90 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 ||| ||||| ||||||||||||||| |||||| || ||||| || |||||| ||||| | Sbjct: 91 ggaacaggtttcaaggcatcgtacaatcatgaatatttttgagaaagagccaaggatcca 150 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 | |||||| |||||||| ||||||||| | |||||||| |||||||||||||| ||||| Sbjct: 151 tagagatgtgtttgttgctcccagtgcagcagtcattggggatgttgagattggtcatgg 210 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| ||||||||||| || ||| | |||||||||||||||||||| |||| ||||||||| Sbjct: 211 atcgtcaatctggtacggatccatattgagaggtgatgtcaacagcattcatattggatc 270 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 ||| | |||||||| ||||| ||||||||||||||| |||| ||| |||||| ||||| Sbjct: 271 tggtactaatatacaagacaattcccttgtacatgtttcaaaagctaacattagcgggaa 330 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 |||||| || || || |||||||||||||| ||||| ||||| |||||||| || ||||| Sbjct: 331 ggtcctcccaaccataattggaagcaacgtgacagtgggtcacagtgctgtattacatgc 390 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 391 atgtaccattgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 450 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||| Sbjct: 451 ggttgaaaagcacagcatggttggtgcaggatctcttgttaagcagaatacaaggattcc 510 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 511 ttctggagaggtctgggtcggtaatcctgccaagttcctaaggaagcttacagaagagga 570 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | |||||||| ||||| ||| ||||||| |||||| |||| || || ||||| | Sbjct: 571 gattgcgttcatcgctcaatcagcaaccaactatatcaacctagcccaggtccatgcagc 630 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 ||||| |||||||||||||||||||||||||||||||| Sbjct: 631 cgagaacgccaagagcttcgacgagattgagctcgagaag 670
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 626 bits (316), Expect = e-176 Identities = 560/640 (87%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 221 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 279 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 ||||||| | ||||||||||| || |||||| ||||||||| || ||||| | || | Sbjct: 280 ggagcagctttcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtcca 339 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 ||| |||||||||||||| ||||||||| |||| ||||| ||||||||||| |||||||| Sbjct: 340 caaggatgtttttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatgg 399 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| ||||||||||| |||||| |||| ||||||||||||||||| |||| ||||||||| Sbjct: 400 atcctcaatctggtacggctccattttaagaggtgatgtcaacagcattcatattggatc 459 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 ||||||||||||||| ||||| |||||||||||||||||||| ||| ||| || ||||| Sbjct: 460 tggatcaaatatacaagacaattcccttgtacatgttgcaaaagctaacatcagcgggaa 519 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 ||| || || || || ||||||| ||| |||||| ||||||||||||||||| |||| || Sbjct: 520 ggttctcccaaccataattggaaacaatgttacaataggtcatagtgctgttctgcacgc 579 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 580 atgcaccgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 639 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||| ||||| |||||||| || |||||||| Sbjct: 640 cgttgaaaagcacagcatggttggtgcaggatcgcttgttaagcagaacacaaggattcc 699 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||| ||||||||||||||||||||||| ||||| || || ||||| Sbjct: 700 ttctggagaggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagagga 759 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | ||||| || || || ||| | ||||||||||| | || ||||| ||||| | Sbjct: 760 gatagcgttcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgc 819 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 ||||||||||||| |||||||||||| |||||||||||| Sbjct: 820 cgagaattccaagaccttcgacgagatcgagctcgagaag 859
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 618 bits (312), Expect = e-174 Identities = 559/640 (87%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 223 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 281 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 ||||||| | ||||||||||| || |||||| ||||||||| || ||||| | || | Sbjct: 282 ggagcagctttcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtcca 341 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 ||| |||||||||||||| ||||||||| |||| ||||| ||||||||||| |||||||| Sbjct: 342 caaggatgtttttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatgg 401 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| ||||||||||| |||||| |||| ||||||||||||||||| |||| ||||||||| Sbjct: 402 atcctcaatctggtacggctccattttaagaggtgatgtcaacagcattcatattggatc 461 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 ||||||||||||||| ||||| |||||||||||||||||||| ||| ||| || ||||| Sbjct: 462 tggatcaaatatacaagacaattcccttgtacatgttgcaaaagctaacatcagcgggaa 521 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 ||| || || || || ||||||| ||| |||||| ||||||||||||||||| |||| || Sbjct: 522 ggttctcccaaccataattggaaacaatgttacaataggtcatagtgctgttctgcacgc 581 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||||||| | ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 582 atgcaccgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 641 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||| ||||| |||||||| || |||||||| Sbjct: 642 cgttgaaaagcacagcatggttggtgcaggatcgcttgttaagcagaacacaaggattcc 701 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||| |||| |||||||||||||||||| ||||| || || ||||| Sbjct: 702 ttctggagaggtctgggtcggtagtcctgccaagttcctaagaaagcttactgaagagga 761 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | ||||| || || || ||| | ||||||||||| | || ||||| ||||| | Sbjct: 762 gatagcgttcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgc 821 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 ||||||||||||| |||||||||||| |||||||||||| Sbjct: 822 cgagaattccaagaccttcgacgagatcgagctcgagaag 861
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 579 bits (292), Expect = e-162 Identities = 554/640 (86%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 131 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 189 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 |||||| || |||||||||| ||| |||||| ||||||||| || ||||| | ||| | Sbjct: 190 cgagcagctgccaaggcatcgcacaatcatgaacatatttgagaaagagcccagaatcca 249 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 ||| |||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 250 caaggatgtttttgttgctcccagtgcagctgtgattggtgatattgagattggacatgg 309 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| |||||||||||||||||| |||| ||||||||||||||||| |||| ||||||| Sbjct: 310 atcctcaatctggtatggctccattttaagaggtgatgtcaacagcattcatattggagt 369 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 |||| |||||||||| ||||| ||||||||||||||| |||| ||| || |||||||| Sbjct: 370 tggaacaaatatacaagacaattcccttgtacatgtttcaaaagctaatatcagtgggaa 429 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 ||| || || || || ||||||| || |||||| ||||||| ||||||||| | || || Sbjct: 430 ggttctcccaaccataattggaaacagtgttacaataggtcacagtgctgttctacacgc 489 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||||| | | ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 490 atgcatcgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 549 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 550 ggttgaaaagcacagcatggttggtgcaggatcccttgtaaagcaaaacaccaggattcc 609 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||||||||||||||||||||||||||| ||||| || || ||||| Sbjct: 610 ttctggagaggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagagga 669 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | ||||| || || || ||| | ||||| ||||| || |||||||| || || | Sbjct: 670 gatggcgttcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagc 729 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||| |||||| |||||||||||||||||| Sbjct: 730 cgagaatgccaagaccttcgatgagattgagctcgagaag 769
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 579 bits (292), Expect = e-162 Identities = 554/640 (86%), Gaps = 1/640 (0%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 131 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 189 Query: 77 ggagcaggtgtcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaa 136 |||||| || |||||||||| ||| |||||| ||||||||| || ||||| | ||| | Sbjct: 190 cgagcagctgccaaggcatcgcacaatcatgaacatatttgagaaagagcccagaatcca 249 Query: 137 caaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgg 196 ||| |||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 250 caaggatgtttttgttgctcccagtgcagctgtgattggtgatattgagattggacatgg 309 Query: 197 atcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatc 256 ||| |||||||||||||||||| |||| ||||||||||||||||| |||| ||||||| Sbjct: 310 atcctcaatctggtatggctccattttaagaggtgatgtcaacagcattcatattggagt 369 Query: 257 tggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaa 316 |||| |||||||||| ||||| ||||||||||||||| |||| ||| || |||||||| Sbjct: 370 tggaacaaatatacaagacaattcccttgtacatgtttcaaaagctaatatcagtgggaa 429 Query: 317 ggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgc 376 ||| || || || || ||||||| || |||||| ||||||| ||||||||| | || || Sbjct: 430 ggttctcccaaccataattggaaacagtgttacaataggtcacagtgctgttctacacgc 489 Query: 377 atgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggt 436 ||||| | | ||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 490 atgcatcgtcgaggatgaagcttttgttggtatgggtgccactctgcttgatggagtggt 549 Query: 437 tgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcc 496 ||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 550 ggttgaaaagcacagcatggttggtgcaggatcccttgtaaagcaaaacaccaggattcc 609 Query: 497 ttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggagga 556 |||||| ||||||||||||||||||||||||||||||||||| ||||| || || ||||| Sbjct: 610 ttctggagaggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagagga 669 Query: 557 gatcacattcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccac 616 ||| | ||||| || || || ||| | ||||| ||||| || |||||||| || || | Sbjct: 670 gatggcgttcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagc 729 Query: 617 tgagaattccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||| |||||| |||||||||||||||||| Sbjct: 730 cgagaatgccaagaccttcgatgagattgagctcgagaag 769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 198 bits (100), Expect = 2e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 3550466 aggtcatagtgctgttctgcacgcatgcaccgtcgaggatgaagcttttgttggtatggg 3550525 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 3550526 tgccactctgcttgatggagtggtcgttgaaaagcacagcatggttggtgcaggatcgct 3550585 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| |||||||| || |||||||||||||| ||||| Sbjct: 3550586 tgttaagcagaacacaaggattccttctggagaggt 3550621 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 3550085 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 3550144 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 3550145 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 3550204 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 3550205 tacaataggtca 3550216 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 87 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 146 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 3549284 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 3549343 Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 3549344 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 3549403 Query: 207 tggtatggctccgttttgagaggt 230 ||||| |||||| |||| |||||| Sbjct: 3549404 tggtacggctccattttaagaggt 3549427 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||| ||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 3551116 aggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagaggagatagcgt 3551175 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||||||||| | || ||||| ||||| | ||||||| Sbjct: 3551176 tcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgccgagaatt 3551235 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||||||||| |||||||||||| Sbjct: 3551236 ccaagaccttcgacgagatcgagctcgagaag 3551267 Score = 109 bits (55), Expect = 1e-20 Identities = 65/67 (97%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 3548437 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 3548495 Query: 77 ggagcag 83 ||||||| Sbjct: 3548496 ggagcag 3548502
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 198 bits (100), Expect = 2e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 3550411 aggtcatagtgctgttctgcacgcatgcaccgtcgaggatgaagcttttgttggtatggg 3550470 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 3550471 tgccactctgcttgatggagtggtcgttgaaaagcacagcatggttggtgcaggatcgct 3550530 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| |||||||| || |||||||||||||| ||||| Sbjct: 3550531 tgttaagcagaacacaaggattccttctggagaggt 3550566 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 3550030 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 3550089 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 3550090 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 3550149 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 3550150 tacaataggtca 3550161 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 87 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 146 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 3549229 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 3549288 Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 3549289 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 3549348 Query: 207 tggtatggctccgttttgagaggt 230 ||||| |||||| |||| |||||| Sbjct: 3549349 tggtacggctccattttaagaggt 3549372 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||| ||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 3551061 aggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagaggagatagcgt 3551120 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||||||||| | || ||||| ||||| | ||||||| Sbjct: 3551121 tcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgccgagaatt 3551180 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||||||||| |||||||||||| Sbjct: 3551181 ccaagaccttcgacgagatcgagctcgagaag 3551212 Score = 109 bits (55), Expect = 1e-20 Identities = 65/67 (97%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 3548382 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 3548440 Query: 77 ggagcag 83 ||||||| Sbjct: 3548441 ggagcag 3548447
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 198 bits (100), Expect = 2e-47 Identities = 142/156 (91%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| Sbjct: 65394 aggtcatagtgctgttctgcacgcatgcaccgtcgaggatgaagcttttgttggtatggg 65453 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 65454 tgccactctgcttgatggagtggtcgttgaaaagcacagcatggttggtgcaggatcgct 65513 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| |||||||| || |||||||||||||| ||||| Sbjct: 65514 tgttaagcagaacacaaggattccttctggagaggt 65549 Score = 127 bits (64), Expect = 5e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||||| Sbjct: 65013 aggtgatgtcaacagcattcatattggatctggatcaaatatacaagacaattcccttgt 65072 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 |||||||||||| ||| ||| || |||||||| || || || || ||||||| ||| || Sbjct: 65073 acatgttgcaaaagctaacatcagcgggaaggttctcccaaccataattggaaacaatgt 65132 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 65133 tacaataggtca 65144 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 87 tcaaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgtt 146 ||||||||||| || |||||| ||||||||| || ||||| | || |||| |||||| Sbjct: 64212 tcaaggcatcgcacgatcatgaacatatttgagaaagagcccagagtccacaaggatgtt 64271 Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| ||||||||| |||| ||||| ||||||||||| ||||||||||| |||||| Sbjct: 64272 tttgttgctcccagtgcagctgtgattggcgatgttgagatcggacatggatcctcaatc 64331 Query: 207 tggtatggctccgttttgagaggt 230 ||||| |||||| |||| |||||| Sbjct: 64332 tggtacggctccattttaagaggt 64355 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||| ||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 66044 aggtctgggtcggtaatcctgccaagttcctaagaaagcttactgaagaggagatagcgt 66103 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||||||||| | || ||||| ||||| | ||||||| Sbjct: 66104 tcattgctcagtcagcaacgaactacatcaatctggcccaagtccatgctgccgagaatt 66163 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||||||||| |||||||||||| Sbjct: 66164 ccaagaccttcgacgagatcgagctcgagaag 66195 Score = 109 bits (55), Expect = 1e-20 Identities = 65/67 (97%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 63365 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 63423 Query: 77 ggagcag 83 ||||||| Sbjct: 63424 ggagcag 63430
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 167 bits (84), Expect = 6e-38 Identities = 138/156 (88%) Strand = Plus / Minus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||| ||||||||| | || ||||||| | | |||||||||||||||||||||||||| Sbjct: 26722984 aggtcacagtgctgttctacacgcatgcatcgtcgaggatgaagcttttgttggtatggg 26722925 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 26722924 tgccactctgcttgatggagtggtggttgaaaagcacagcatggttggtgcaggatccct 26722865 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| ||||| || || |||||||||||||| ||||| Sbjct: 26722864 tgtaaagcaaaacaccaggattccttctggagaggt 26722829 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 88 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 147 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 26724330 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 26724271 Query: 148 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 207 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 26724270 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 26724211 Query: 208 ggtatggctccgttttgagaggt 230 ||||||||||| |||| |||||| Sbjct: 26724210 ggtatggctccattttaagaggt 26724188 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||||||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 26722367 aggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagaggagatggcgt 26722308 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||| ||||| || |||||||| || || | |||||| Sbjct: 26722307 tcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagccgagaatg 26722248 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||| |||||||||||||||||| Sbjct: 26722247 ccaagaccttcgatgagattgagctcgagaag 26722216 Score = 101 bits (51), Expect = 3e-18 Identities = 64/67 (95%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 26724967 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 26724909 Query: 77 ggagcag 83 |||||| Sbjct: 26724908 cgagcag 26724902 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 26723356 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 26723297 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 26723296 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 26723237 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 26723236 tacaataggtca 26723225
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 167 bits (84), Expect = 6e-38 Identities = 138/156 (88%) Strand = Plus / Minus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||| ||||||||| | || ||||||| | | |||||||||||||||||||||||||| Sbjct: 69841 aggtcacagtgctgttctacacgcatgcatcgtcgaggatgaagcttttgttggtatggg 69782 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 69781 tgccactctgcttgatggagtggtggttgaaaagcacagcatggttggtgcaggatccct 69722 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| ||||| || || |||||||||||||| ||||| Sbjct: 69721 tgtaaagcaaaacaccaggattccttctggagaggt 69686 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 88 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 147 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 71187 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 71128 Query: 148 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 207 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 71127 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 71068 Query: 208 ggtatggctccgttttgagaggt 230 ||||||||||| |||| |||||| Sbjct: 71067 ggtatggctccattttaagaggt 71045 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||||||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 69224 aggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagaggagatggcgt 69165 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||| ||||| || |||||||| || || | |||||| Sbjct: 69164 tcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagccgagaatg 69105 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||| |||||||||||||||||| Sbjct: 69104 ccaagaccttcgatgagattgagctcgagaag 69073 Score = 101 bits (51), Expect = 3e-18 Identities = 64/67 (95%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 71824 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 71766 Query: 77 ggagcag 83 |||||| Sbjct: 71765 cgagcag 71759 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 70213 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 70154 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 70153 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 70094 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 70093 tacaataggtca 70082
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 167 bits (84), Expect = 6e-38 Identities = 138/156 (88%) Strand = Plus / Minus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||| ||||||||| | || ||||||| | | |||||||||||||||||||||||||| Sbjct: 140588 aggtcacagtgctgttctacacgcatgcatcgtcgaggatgaagcttttgttggtatggg 140529 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctct 472 ||||||| |||||||||| ||||| ||||||||||||||||||||||| || ||||| || Sbjct: 140528 tgccactctgcttgatggagtggtggttgaaaagcacagcatggttggtgcaggatccct 140469 Query: 473 tgtcaagcagaatacgaggattccttctggggaggt 508 ||| ||||| || || |||||||||||||| ||||| Sbjct: 140468 tgtaaagcaaaacaccaggattccttctggagaggt 140433 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Minus Query: 88 caaggcatcgtacagtcatgagcatatttgataaggagccacggatcaacaaagatgttt 147 |||||||||| ||| |||||| ||||||||| || ||||| | ||| |||| ||||||| Sbjct: 141934 caaggcatcgcacaatcatgaacatatttgagaaagagcccagaatccacaaggatgttt 141875 Query: 148 ttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatct 207 ||||||| ||||||||| |||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 141874 ttgttgctcccagtgcagctgtgattggtgatattgagattggacatggatcctcaatct 141815 Query: 208 ggtatggctccgttttgagaggt 230 ||||||||||| |||| |||||| Sbjct: 141814 ggtatggctccattttaagaggt 141792 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 505 aggtctgggttggtaatcctgccaagttcctaaggaagctgacagaggaggagatcacat 564 |||||||||||||||||||||||||||||||||| ||||| || || |||||||| | | Sbjct: 139971 aggtctgggttggtaatcctgccaagttcctaagaaagcttactgaagaggagatggcgt 139912 Query: 565 tcatcgcccaatcggcagccaactacatcaacttagctcaagttcatgccactgagaatt 624 |||| || || || ||| | ||||| ||||| || |||||||| || || | |||||| Sbjct: 139911 tcattgcacagtcagcaacaaactatatcaatttggctcaagtccacgcagccgagaatg 139852 Query: 625 ccaagagcttcgacgagattgagctcgagaag 656 |||||| |||||| |||||||||||||||||| Sbjct: 139851 ccaagaccttcgatgagattgagctcgagaag 139820 Score = 101 bits (51), Expect = 3e-18 Identities = 64/67 (95%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 17 ggcacggggcaggccatggnaccgcctcggatccaccatccagggcggcctccgcgccga 76 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 142571 ggcacggggcaggccatgg-accgcctcggatccaccatccagggcggcctccgcgtcga 142513 Query: 77 ggagcag 83 |||||| Sbjct: 142512 cgagcag 142506 Score = 87.7 bits (44), Expect = 4e-14 Identities = 110/132 (83%) Strand = Plus / Minus Query: 227 aggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcccttgt 286 ||||||||||||||| |||| ||||||| |||| |||||||||| ||||| |||||||| Sbjct: 140960 aggtgatgtcaacagcattcatattggagttggaacaaatatacaagacaattcccttgt 140901 Query: 287 acatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaacgt 346 ||||||| |||| ||| || ||||||||||| || || || || ||||||| || || Sbjct: 140900 acatgtttcaaaagctaatatcagtgggaaggttctcccaaccataattggaaacagtgt 140841 Query: 347 tacagtaggtca 358 |||| ||||||| Sbjct: 140840 tacaataggtca 140829
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 99.6 bits (50), Expect = 1e-17 Identities = 311/398 (78%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 277 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 336 Query: 207 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 266 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 337 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 396 Query: 267 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 326 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 397 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 456 Query: 327 acgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccatt 386 || |||||||| ||||| |||||||||||||||||||| || || | ||| || || Sbjct: 457 accatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgtt 516 Query: 387 gaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaaag 446 ||||| ||||| |||||||||||||| || || || | |||||||| || || |||||| Sbjct: 517 gaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaag 576 Query: 447 cacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctggggag 506 || | ||||||| |||||| | ||||| | ||||| || ||||| || | ||| ||| Sbjct: 577 catgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagag 636 Query: 507 gtctgggttggtaatcctgccaagttcctaaggaagct 544 || |||| || || |||||||| ||||| |||||||| Sbjct: 637 gtatggggaggaaaccctgccaaattcctgaggaagct 674
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 99.6 bits (50), Expect = 1e-17 Identities = 311/398 (78%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 327 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 386 Query: 207 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 266 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 387 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 446 Query: 267 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 326 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 447 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 506 Query: 327 acgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccatt 386 || |||||||| ||||| |||||||||||||||||||| || || | ||| || || Sbjct: 507 accatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgtt 566 Query: 387 gaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaaag 446 ||||| ||||| |||||||||||||| || || || | |||||||| || || |||||| Sbjct: 567 gaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaag 626 Query: 447 cacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctggggag 506 || | ||||||| |||||| | ||||| | ||||| || ||||| || | ||| ||| Sbjct: 627 catgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagag 686 Query: 507 gtctgggttggtaatcctgccaagttcctaaggaagct 544 || |||| || || |||||||| ||||| |||||||| Sbjct: 687 gtatggggaggaaaccctgccaaattcctgaggaagct 724
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 99.6 bits (50), Expect = 1e-17 Identities = 311/398 (78%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 319 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 378 Query: 207 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 266 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 379 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 438 Query: 267 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 326 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 439 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 498 Query: 327 acgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccatt 386 || |||||||| ||||| |||||||||||||||||||| || || | ||| || || Sbjct: 499 accatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgtt 558 Query: 387 gaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaaag 446 ||||| ||||| |||||||||||||| || || || | |||||||| || || |||||| Sbjct: 559 gaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaag 618 Query: 447 cacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctggggag 506 || | ||||||| |||||| | ||||| | ||||| || ||||| || | ||| ||| Sbjct: 619 catgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagag 678 Query: 507 gtctgggttggtaatcctgccaagttcctaaggaagct 544 || |||| || || |||||||| ||||| |||||||| Sbjct: 679 gtatggggaggaaaccctgccaaattcctgaggaagct 716
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 99.6 bits (50), Expect = 1e-17 Identities = 311/398 (78%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 327 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 386 Query: 207 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 266 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 387 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 446 Query: 267 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 326 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 447 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 506 Query: 327 acgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccatt 386 || |||||||| ||||| |||||||||||||||||||| || || | ||| || || Sbjct: 507 accatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgtt 566 Query: 387 gaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaaag 446 ||||| ||||| |||||||||||||| || || || | |||||||| || || |||||| Sbjct: 567 gaggacgaagcatttgttggtatgggggcgaccctgttagatggtgttgtcgtggaaaag 626 Query: 447 cacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctggggag 506 || | ||||||| |||||| | ||||| | ||||| || ||||| || | ||| ||| Sbjct: 627 catgggatggttgctgctggagcccttgtaagacagaacacaaggatcccctgtggagag 686 Query: 507 gtctgggttggtaatcctgccaagttcctaaggaagct 544 || |||| || || |||||||| ||||| |||||||| Sbjct: 687 gtatggggaggaaaccctgccaaattcctgaggaagct 724
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 97.6 bits (49), Expect = 4e-17 Identities = 202/253 (79%) Strand = Plus / Plus Query: 309 agtgggaaggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgtt 368 |||||||||||| |||| || | |||||| | ||||| |||||||||||||||||||| Sbjct: 462 agtgggaaggtctttccaacaaccattggtaataacgtcacagtaggtcatagtgctgtg 521 Query: 369 ttgcatgcatgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgat 428 || || | |||||| |||||||||| ||||||||||| || || || || | | ||| Sbjct: 522 ttacaaggatgcacggttgaggatgaggcttttgttggcattggggcaaccctattagat 581 Query: 429 ggtgtggttgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacg 488 ||||| ||||||||||||||| | ||||| | |||||| | || || ||||||||| Sbjct: 582 ggtgttgttgttgaaaagcacggaatggtggctgctggagccctcgtacggcagaatact 641 Query: 489 aggattccttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgaca 548 ||||| |||| ||| ||||| |||| || || |||||||| || || |||||||| ||| Sbjct: 642 aggatcccttgtggagaggtatggggagggaaccctgccaaatttctgaggaagctcaca 701 Query: 549 gaggaggagatca 561 || || ||||||| Sbjct: 702 gatgacgagatca 714
>ref|NM_103620.2| Arabidopsis thaliana APFI AT1G47260 (APFI) mRNA, complete cds Length = 1750 Score = 95.6 bits (48), Expect = 2e-16 Identities = 294/376 (78%) Strand = Plus / Plus Query: 138 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 197 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 306 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 365 Query: 198 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 257 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 366 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 425 Query: 258 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 317 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 426 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 485 Query: 318 gtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgca 377 || || || || | ||||| ||| || ||||||||||| |||||||| | |||| Sbjct: 486 gttctacctactctgattggggacaatgtaacagtaggtcacagtgctgtcattcatggg 545 Query: 378 tgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggtt 437 || || |||||||||| ||||||||||||||||| || || | |||||||||||||| Sbjct: 546 tgtactgttgaggatgatgcttttgttggtatgggagcaacactacttgatggtgtggtg 605 Query: 438 gttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcct 497 ||||| || || |||||||| ||||| |||||||| || ||||| ||| | || ||| Sbjct: 606 gttgagaaacatgccatggttgctgctggttctcttgtgaaacagaacacgcgaatccct 665 Query: 498 tctggggaggtctggg 513 ||||| ||||| |||| Sbjct: 666 tctggagaggtgtggg 681
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 95.6 bits (48), Expect = 2e-16 Identities = 201/252 (79%) Strand = Plus / Minus Query: 309 agtgggaaggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgtt 368 |||||||| ||| |||| || |||||||| | ||||| |||||||||||||||||||| Sbjct: 707 agtgggaaagtctttccaacaatcattggcaataacgtcacagtaggtcatagtgctgtg 648 Query: 369 ttgcatgcatgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgat 428 || || | |||||| |||||||||| ||||||||||| ||||| || || | | ||| Sbjct: 647 ttacaaggatgcacggttgaggatgaggcttttgttggcatgggggcaaccctattagat 588 Query: 429 ggtgtggttgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacg 488 ||||| ||||||||||||||| | ||||| | |||||| | || || |||||||| Sbjct: 587 ggtgtcgttgttgaaaagcacgggatggtagctgctggagccctcgtacgacagaatact 528 Query: 489 aggattccttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgaca 548 ||||| |||| ||| ||||| |||| ||| || || ||||| || || |||||||| ||| Sbjct: 527 aggatcccttgtggagaggtatggggtgggaaccccgccaaatttctgaggaagctcaca 468 Query: 549 gaggaggagatc 560 || || |||||| Sbjct: 467 gatgacgagatc 456
>gb|AY113936.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 868 Score = 95.6 bits (48), Expect = 2e-16 Identities = 294/376 (78%) Strand = Plus / Plus Query: 138 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 197 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 169 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 228 Query: 198 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 257 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 229 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 288 Query: 258 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 317 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 289 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 348 Query: 318 gtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgca 377 || || || || | ||||| ||| || ||||||||||| |||||||| | |||| Sbjct: 349 gttctacctactctgattggggacaatgtaacagtaggtcacagtgctgtcattcatggg 408 Query: 378 tgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggtt 437 || || |||||||||| ||||||||||||||||| || || | |||||||||||||| Sbjct: 409 tgtactgttgaggatgatgcttttgttggtatgggagcaacactacttgatggtgtggtg 468 Query: 438 gttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcct 497 ||||| || || |||||||| ||||| |||||||| || ||||| ||| | || ||| Sbjct: 469 gttgagaaacatgccatggttgctgctggttctcttgtgaaacagaacacgcgaatccct 528 Query: 498 tctggggaggtctggg 513 ||||| ||||| |||| Sbjct: 529 tctggagaggtgtggg 544
>gb|AY045979.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 1182 Score = 95.6 bits (48), Expect = 2e-16 Identities = 294/376 (78%) Strand = Plus / Plus Query: 138 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 197 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 275 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 334 Query: 198 tcatcaatctggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatct 257 || || || |||||||||| ||| | |||||||||| || | || || |||||||| Sbjct: 335 tcgtcgatttggtatggctgtgttcttcgaggtgatgtgaataacatcagtgttggatct 394 Query: 258 ggatcaaatatacaggacaactcccttgtacatgttgcaaagactagcattagtgggaag 317 || | ||||| || || || | |||||||||||||||||||| | ||| ||||| ||| Sbjct: 395 gggacgaatatccaagataatacgcttgtacatgttgcaaagaccaacataagtggcaag 454 Query: 318 gtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgca 377 || || || || | ||||| ||| || ||||||||||| |||||||| | |||| Sbjct: 455 gttctacctactctgattggggacaatgtaacagtaggtcacagtgctgtcattcatggg 514 Query: 378 tgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggtt 437 || || |||||||||| ||||||||||||||||| || || | |||||||||||||| Sbjct: 515 tgtactgttgaggatgatgcttttgttggtatgggagcaacactacttgatggtgtggtg 574 Query: 438 gttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattcct 497 ||||| || || |||||||| ||||| |||||||| || ||||| ||| | || ||| Sbjct: 575 gttgagaaacatgccatggttgctgctggttctcttgtgaaacagaacacgcgaatccct 634 Query: 498 tctggggaggtctggg 513 ||||| ||||| |||| Sbjct: 635 tctggagaggtgtggg 650
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 91.7 bits (46), Expect = 3e-15 Identities = 211/266 (79%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 178 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 237 Query: 207 tggtatggctccgttttgagaggtgatgtcaacagtattcgtattggatctggatcaaat 266 |||||||| | ||| || ||||| |||| |||| ||| ||||||||||| | ||| Sbjct: 238 tggtatggatgcgtcttaagaggggatgcaaacaacgttcaaattggatctgggaccaat 297 Query: 267 atacaggacaactcccttgtacatgttgcaaagactagcattagtgggaaggtccttccg 326 ||||| ||||| || ||||| ||||| ||||| ||| ||||||| || ||| |||| Sbjct: 298 atacaagacaattctcttgtccatgtggcaaaatctaatcttagtggaaaagtctttcca 357 Query: 327 acgatcattggaagcaacgttacagtaggtcatagtgctgttttgcatgcatgcaccatt 386 || |||||||| ||||| |||||||||||||||||||| || || | ||| || || Sbjct: 358 accatcattggggataacgtcacagtaggtcatagtgctgtattacaaggatgtactgtt 417 Query: 387 gaggatgaagcttttgttggtatggg 412 ||||| ||||| |||||||||||||| Sbjct: 418 gaggacgaagcatttgttggtatggg 443
>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence Length = 1060 Score = 89.7 bits (45), Expect = 1e-14 Identities = 204/257 (79%) Strand = Plus / Plus Query: 309 agtgggaaggtccttccgacgatcattggaagcaacgttacagtaggtcatagtgctgtt 368 |||||||| ||| |||| || |||||||| | ||||| ||| ||||||| |||||||| Sbjct: 418 agtgggaaagtctttccaacaatcattggtaataacgtcacaataggtcacagtgctgtg 477 Query: 369 ttgcatgcatgcaccattgaggatgaagcttttgttggtatgggtgccactttgcttgat 428 || || | |||||| |||||||||| ||||||||||| ||||| || || | | ||| Sbjct: 478 ttacaaggatgcacggttgaggatgaggcttttgttggcatgggggcaaccctattagat 537 Query: 429 ggtgtggttgttgaaaagcacagcatggttggcgctggatctcttgtcaagcagaatacg 488 ||||| |||||||||||||| | ||||| | || ||||| ||||| | |||||||| Sbjct: 538 ggtgtcgttgttgaaaagcatgggatggtagctgcaggatcccttgtaagacagaatact 597 Query: 489 aggattccttctggggaggtctgggttggtaatcctgccaagttcctaaggaagctgaca 548 ||||| |||| ||| ||||| |||| || || |||||||| || || |||||||| ||| Sbjct: 598 aggatcccttgtggagaggtatggggagggaaccctgccaaatttctgaggaagctcaca 657 Query: 549 gaggaggagatcacatt 565 || || |||||| |||| Sbjct: 658 gatgacgagatcgcatt 674
>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA, complete cds Length = 1260 Score = 89.7 bits (45), Expect = 1e-14 Identities = 138/169 (81%) Strand = Plus / Plus Query: 345 gttacagtaggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgtt 404 ||||| ||||||||||||||||| || |||| ||| || |||| ||||| || |||||| Sbjct: 377 gttactgtaggtcatagtgctgtcttacatggatgtactgttgaagatgaggcatttgtt 436 Query: 405 ggtatgggtgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgct 464 ||||||||||| ||| |||| ||||| || ||||| || || | ||||||| ||| Sbjct: 437 ggtatgggtgcaactctgctagatggagttgttgtggagaaaaatgcaatggttgcggct 496 Query: 465 ggatctcttgtcaagcagaatacgaggattccttctggggaggtctggg 513 || | ||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 497 ggtgcccttgtcaggcagaatacgaggattccttgtggagaggtctggg 545
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 81.8 bits (41), Expect = 3e-12 Identities = 167/209 (79%) Strand = Plus / Plus Query: 225 agaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactccctt 284 ||||||||||| ||||| || || | |||||||| | ||||||||||||||||||||| Sbjct: 414 agaggtgatgttaacagcatcagtgtcggatctggtaccaatatacaggacaactccctt 473 Query: 285 gtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagcaac 344 || ||||| || || | | || ||| ||||| || || || ||||| || | ||| Sbjct: 474 gttcatgtggccaaatcaaatataagtcaaaaggtgctgcccaccatcatagggaacaat 533 Query: 345 gttacagtaggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgtt 404 ||||| || ||||||||||||||| | |||| ||||||||||||||||| || || || Sbjct: 534 gttactgttggtcatagtgctgttgtacatggctgcaccattgaggatgaggccttcatt 593 Query: 405 ggtatgggtgccactttgcttgatggtgt 433 |||||||| ||||| ||||||||||||| Sbjct: 594 ggtatgggggccacactgcttgatggtgt 622
>gb|AF249876.1|AF249876 Arabidopsis thaliana transcription factor APFI mRNA, complete cds Length = 1216 Score = 71.9 bits (36), Expect = 3e-09 Identities = 183/232 (78%) Strand = Plus / Plus Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 |||||||||||||||||||| | || ||||| ||||| || || || | ||||| | Sbjct: 452 cttgtacatgttgcaaagaccacaataagtggcaaggttctacctactctgattggggac 511 Query: 342 aacgttacagtaggtcatagtgctgttttgcatgcatgcaccattgaggatgaagctttt 401 || || ||||||||||| |||||||| | |||| || || |||||||||| |||||| Sbjct: 512 aatgtaacagtaggtcacagtgctgtcattcatgggtgtactgttgaggatgatgctttt 571 Query: 402 gttggtatgggtgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggc 461 ||||||||||| || || | ||||||||||| || ||||| || || |||||||| Sbjct: 572 gttggtatgggagcaacactacttgatggtgttgtggttgagaaacatgccatggttgct 631 Query: 462 gctggatctcttgtcaagcagaatacgaggattccttctggggaggtctggg 513 ||||| |||||||| || ||||| ||| | || |||||||| ||||| |||| Sbjct: 632 gctggttctcttgtgaaacagaacacgcgaatcccttctggagaggtgtggg 683
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 71.9 bits (36), Expect = 3e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaa 444 |||||||||| ||||||||||||||||| || || | |||||||||||||| ||||| | Sbjct: 7901 ttgaggatgatgcttttgttggtatgggagcaacactacttgatggtgtggtggttgaga 7960 Query: 445 agcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctgggg 504 | || |||||||| ||||| |||||||| || ||||| ||| | || |||||||| | Sbjct: 7961 aacatgccatggttgctgctggttctcttgtgaaacagaacacgcgaatcccttctggag 8020 Query: 505 aggt 508 |||| Sbjct: 8021 aggt 8024 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Plus Query: 138 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 197 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 7292 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 7351 Query: 198 tcatcaatctggtatggct 216 || || || |||||||||| Sbjct: 7352 tcgtcgatttggtatggct 7370 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggt 319 |||||||||||||||||||| | ||| ||||| ||||| Sbjct: 7696 cttgtacatgttgcaaagaccaacataagtggcaaggt 7733
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||||||||||||||| |||| ||| || |||||||||| | ||| |||| ||||| Sbjct: 86209 aggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatggg 86150 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagca 448 ||| || | |||||||| || |||||||||||||| Sbjct: 86149 tgcgacacttcttgatggggtcgttgttgaaaagca 86114
>emb|BX816589.1|CNS0ADBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 63.9 bits (32), Expect = 6e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 386 tgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttgaaaa 445 ||||||||| ||||||||||||||||| || | | |||||||||||||| ||||| || Sbjct: 504 tgaggatgatgcttttgttggtatgggagcaaaactacttgatggtgtggtggttgagaa 563 Query: 446 gcacagcatggttggcgctggatctcttgtcaagcagaatacgaggattccttctgggga 505 || |||||||| ||||| |||||||| || ||||| ||| | || |||||||| || Sbjct: 564 acatgccatggttgctgctggttctcttgtgaaacagaacacgcgaatcccttctggaga 623 Query: 506 ggtctggg 513 ||| |||| Sbjct: 624 ggtgtggg 631 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Plus Query: 138 aaagatgtttttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatgga 197 |||||||| ||||| || || ||||| ||||| |||||||||||| |||| ||| | || Sbjct: 252 aaagatgtgtttgtggctccgagtgcttctgttattggtgatgttcagatcggaaaaggc 311 Query: 198 tcatcaatctggtatggct 216 || || || |||||||||| Sbjct: 312 tcgtcgatttggtatggct 330 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggt 319 |||||||||||||||||||| | ||| ||||| ||||| Sbjct: 396 cttgtacatgttgcaaagaccaacataagtggcaaggt 433
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 |||||||||||||||||| |||| ||| || |||||||||| | ||| |||| ||||| Sbjct: 109437 aggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatggg 109496 Query: 413 tgccactttgcttgatggtgtggttgttgaaaagca 448 ||| || | |||||||| || |||||||||||||| Sbjct: 109497 tgcgacacttcttgatggggtcgttgttgaaaagca 109532
>ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 mRNA, complete cds Length = 1357 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 354 ggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgggt 413 ||||||||||||||||| |||| ||| || |||||||||| | ||| |||| |||||| Sbjct: 559 ggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatgggt 618 Query: 414 gccactttgcttgatggtgtggttgttgaaaagca 448 || || | |||||||| || |||||||||||||| Sbjct: 619 gcgacacttcttgatggggtcgttgttgaaaagca 653
>gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete sequence Length = 1337 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 354 ggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgggt 413 ||||||||||||||||| |||| ||| || |||||||||| | ||| |||| |||||| Sbjct: 561 ggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatgggt 620 Query: 414 gccactttgcttgatggtgtggttgttgaaaagca 448 || || | |||||||| || |||||||||||||| Sbjct: 621 gcgacacttcttgatggggtcgttgttgaaaagca 655
>dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-B01 Length = 1131 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 354 ggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgggt 413 ||||||||||||||||| |||| ||| || |||||||||| | ||| |||| |||||| Sbjct: 445 ggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatgggt 504 Query: 414 gccactttgcttgatggtgtggttgttgaaaagca 448 || || | |||||||| || |||||||||||||| Sbjct: 505 gcgacacttcttgatggggtcgttgttgaaaagca 539
>dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-H22 Length = 1293 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 354 ggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgggt 413 ||||||||||||||||| |||| ||| || |||||||||| | ||| |||| |||||| Sbjct: 503 ggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatgggt 562 Query: 414 gccactttgcttgatggtgtggttgttgaaaagca 448 || || | |||||||| || |||||||||||||| Sbjct: 563 gcgacacttcttgatggggtcgttgttgaaaagca 597
>dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-L07 Length = 1158 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 354 ggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgggt 413 ||||||||||||||||| |||| ||| || |||||||||| | ||| |||| |||||| Sbjct: 472 ggtcatagtgctgttttacatggatgtactgttgaggatgagacctttattgggatgggt 531 Query: 414 gccactttgcttgatggtgtggttgttgaaaagca 448 || || | |||||||| || |||||||||||||| Sbjct: 532 gcgacacttcttgatggggtcgttgttgaaaagca 566
>emb|BX816366.1|CNS0ADBR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1058 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgttggtatgggtgccactttgcttgatggtgtggttgttga 442 |||||||||| ||||||||||||||||| || || | |||||||||||||| ||||| Sbjct: 469 ttgaggatgatgcttttgttggtatgggagcgacactacttgatggtgtggtggttga 526
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 56.0 bits (28), Expect = 2e-04 Identities = 109/136 (80%) Strand = Plus / Minus Query: 352 taggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatgg 411 ||||||| |||||||| || || | |||||| |||||||||| || || |||| |||| Sbjct: 77236 taggtcacagtgctgtgttacaaggatgcactgttgaggatgaggcattcattggcatgg 77177 Query: 412 gtgccactttgcttgatggtgtggttgttgaaaagcacagcatggttggcgctggatctc 471 |||| || || |||||||||||| |||||| || || |||||||| || ||| ||| Sbjct: 77176 gtgcaaccttacttgatggtgtgcatgttgagaaacatgccatggttgctgccggagctc 77117 Query: 472 ttgtcaagcagaatac 487 |||||| ||||||||| Sbjct: 77116 ttgtcaggcagaatac 77101
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 ||||||||||||||| || || | ||| || ||||||| ||||| |||||||||||||| Sbjct: 10120883 aggtcatagtgctgtattacaaggatgtactgttgaggacgaagcatttgttggtatggg 10120942 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 10119445 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 10119504 Query: 207 tggtatgg 214 |||||||| Sbjct: 10119505 tggtatgg 10119512
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 ||||||||||||||| || || | ||| || ||||||| ||||| |||||||||||||| Sbjct: 68352 aggtcatagtgctgtattacaaggatgtactgttgaggacgaagcatttgttggtatggg 68411 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 66914 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 66973 Query: 207 tggtatgg 214 |||||||| Sbjct: 66974 tggtatgg 66981
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 48.1 bits (24), Expect = 0.037 Identities = 51/60 (85%) Strand = Plus / Plus Query: 353 aggtcatagtgctgttttgcatgcatgcaccattgaggatgaagcttttgttggtatggg 412 ||||||||||||||| || || | ||| || ||||||| ||||| |||||||||||||| Sbjct: 45482 aggtcatagtgctgtattacaaggatgtactgttgaggacgaagcatttgttggtatggg 45541 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Plus Query: 147 tttgttgcgcccagtgcatctgtcattggtgatgttgagattggacatggatcatcaatc 206 |||||||| || ||||||||| ||||||||||| || | ||||||| ||| | ||||| Sbjct: 44044 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 44103 Query: 207 tggtatgg 214 |||||||| Sbjct: 44104 tggtatgg 44111
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 44.1 bits (22), Expect = 0.57 Identities = 121/154 (78%) Strand = Plus / Plus Query: 222 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 281 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 387 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 446 Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 447 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 506 Query: 342 aacgttacagtaggtcatagtgctgttttgcatg 375 || || || | ||||||||||||||||| |||| Sbjct: 507 aatgtcaccattggtcatagtgctgttttacatg 540
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 44.1 bits (22), Expect = 0.57 Identities = 121/154 (78%) Strand = Plus / Plus Query: 222 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 281 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 253 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 312 Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 313 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 372 Query: 342 aacgttacagtaggtcatagtgctgttttgcatg 375 || || || | ||||||||||||||||| |||| Sbjct: 373 aatgtcaccattggtcatagtgctgttttacatg 406
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 44.1 bits (22), Expect = 0.57 Identities = 121/154 (78%) Strand = Plus / Plus Query: 222 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 281 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 361 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 420 Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 421 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 480 Query: 342 aacgttacagtaggtcatagtgctgttttgcatg 375 || || || | ||||||||||||||||| |||| Sbjct: 481 aatgtcaccattggtcatagtgctgttttacatg 514
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 44.1 bits (22), Expect = 0.57 Identities = 121/154 (78%) Strand = Plus / Plus Query: 222 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 281 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 83 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 142 Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 143 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 202 Query: 342 aacgttacagtaggtcatagtgctgttttgcatg 375 || || || | ||||||||||||||||| |||| Sbjct: 203 aatgtcaccattggtcatagtgctgttttacatg 236
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 44.1 bits (22), Expect = 0.57 Identities = 121/154 (78%) Strand = Plus / Plus Query: 222 ttgagaggtgatgtcaacagtattcgtattggatctggatcaaatatacaggacaactcc 281 |||||||| |||| ||||| ||| || ||||| |||| | ||||| ||||||||| | Sbjct: 388 ttgagaggagatgctaacagcattagtgttggagctgggaccaatattcaggacaacgct 447 Query: 282 cttgtacatgttgcaaagactagcattagtgggaaggtccttccgacgatcattggaagc 341 ||||| || ||||| ||||| | | | |||||||||||| | || || |||||||| | Sbjct: 448 cttgtccacgttgctaagaccaacttaagtgggaaggtcttacctactgtcattggagac 507 Query: 342 aacgttacagtaggtcatagtgctgttttgcatg 375 || || || | ||||||||||||||||| |||| Sbjct: 508 aatgtcaccattggtcatagtgctgttttacatg 541
>emb|CR631123.6| Zebrafish DNA sequence from clone DKEY-189H14 in linkage group 19, complete sequence Length = 138519 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 cattggaagcaacgttacagtaggt 356 |||||||||||| |||||||||||| Sbjct: 15862 cattggaagcaaagttacagtaggt 15838
>gb|AC159825.2| Mus musculus BAC clone RP23-100J21 from chromosome 9, complete sequence Length = 209633 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 439 ttgaaaagcacagcatggttg 459 ||||||||||||||||||||| Sbjct: 122427 ttgaaaagcacagcatggttg 122407
>emb|CT030653.10| Mouse DNA sequence from clone RP23-189B14 on chromosome 14, complete sequence Length = 40628 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tgctgttttgcatgcatgcac 382 ||||||||||||||||||||| Sbjct: 13861 tgctgttttgcatgcatgcac 13841
>emb|CR391917.19| Zebrafish DNA sequence from clone DKEY-97O8 in linkage group 1, complete sequence Length = 184212 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 tgcatgcatgcaccattgagg 390 ||||||||||||||||||||| Sbjct: 131522 tgcatgcatgcaccattgagg 131502
>emb|AL935287.15| Zebrafish DNA sequence from clone CH211-280O3, complete sequence Length = 174293 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 tgcatgcatgcaccattgagg 390 ||||||||||||||||||||| Sbjct: 137860 tgcatgcatgcaccattgagg 137880
>ref|NM_120803.1| Arabidopsis thaliana ARR21 (ARABIDOPSIS RESPONSE REGULATOR 21); transcription factor/ two-component response regulator AT5G07210 (ARR21) mRNA, complete cds Length = 1866 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgtattggatctggatcaaa 265 |||||||||||||||||||| Sbjct: 1126 cgtattggatctggatcaaa 1145
>ref|XM_516791.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC460744), mRNA Length = 5298 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3689 tacatcaacatagctcaagttcat 3712
>ref|NM_019001.2| Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA Length = 10123 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3651 tacatcaacatagctcaagttcat 3674
>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence Length = 163466 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 149030 ttgaggatgaagcttttgtt 149011
>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence Length = 152607 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 44286 ttgaggatgaagcttttgtt 44267
>ref|XM_421034.1| PREDICTED: Gallus gallus similar to mucin 5 (LOC423100), mRNA Length = 7710 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggtgatgttgagattggaca 193 |||||||||||||||||||| Sbjct: 3800 ggtgatgttgagattggaca 3781
>gb|AY137776.1| Homo sapiens DNA strand-exchange protein SEP1 mRNA, complete cds Length = 5121 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3584 tacatcaacatagctcaagttcat 3607
>gb|AC162382.8| Mus musculus 6 BAC RP24-398M13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200253 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gcatggttggcgctggatct 470 |||||||||||||||||||| Sbjct: 56573 gcatggttggcgctggatct 56592
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgtattggatctggatcaaa 265 |||||||||||||||||||| Sbjct: 58971 cgtattggatctggatcaaa 58990
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cgacgatcattggaagcaac 344 |||||||||||||||||||| Sbjct: 29761 cgacgatcattggaagcaac 29780
>emb|CR627396.1| Homo sapiens mRNA; cDNA DKFZp686F19113 (from clone DKFZp686F19113) Length = 5485 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3654 tacatcaacatagctcaagttcat 3677
>emb|CR749518.1| Homo sapiens mRNA; cDNA DKFZp686B22225 (from clone DKFZp686B22225) Length = 5399 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3632 tacatcaacatagctcaagttcat 3655
>gb|AC023508.16| Homo sapiens 3 BAC RP11-18O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 136105 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 82111 tacatcaacatagctcaagttcat 82088
>ref|NM_132958.1| Drosophila melanogaster CG12433-RA (CG12433), mRNA Length = 1140 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 269 ttgaggatgaagcttttgtt 288
>gb|BT023403.1| Drosophila melanogaster IP10432 full insert cDNA Length = 1084 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 436 ttgaggatgaagcttttgtt 455
>gb|BT023343.1| Drosophila melanogaster IP10532 full insert cDNA Length = 1084 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 436 ttgaggatgaagcttttgtt 455
>gb|BT023287.1| Drosophila melanogaster IP10632 full insert cDNA Length = 1240 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 592 ttgaggatgaagcttttgtt 611
>gb|BT023207.1| Drosophila melanogaster IP10732 full insert cDNA Length = 1085 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 436 ttgaggatgaagcttttgtt 455
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cgacgatcattggaagcaac 344 |||||||||||||||||||| Sbjct: 35325530 cgacgatcattggaagcaac 35325511
>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence Length = 405682 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ttgatggtgtggttgttgaa 443 |||||||||||||||||||| Sbjct: 213151 ttgatggtgtggttgttgaa 213132
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 cctccgcgccgaggagcagg 84 |||||||||||||||||||| Sbjct: 2098347 cctccgcgccgaggagcagg 2098366
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ggcggcctccgcgccgaggagcaggtgt 87 ||||||| ||||| |||||||||||||| Sbjct: 116882 ggcggccaccgcggcgaggagcaggtgt 116855
>emb|BX640905.1|HSM807042 Homo sapiens mRNA; cDNA DKFZp686L17106 (from clone DKFZp686L17106); complete cds Length = 10123 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 3651 tacatcaacatagctcaagttcat 3674
>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete sequence Length = 298703 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaggatgaagcttttgtt 404 |||||||||||||||||||| Sbjct: 84893 ttgaggatgaagcttttgtt 84912
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 cgacgatcattggaagcaac 344 |||||||||||||||||||| Sbjct: 121375 cgacgatcattggaagcaac 121356
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 aaagatgtttttgttgcgcc 157 |||||||||||||||||||| Sbjct: 2552662 aaagatgtttttgttgcgcc 2552643
>emb|AL512346.41| Mouse DNA sequence from clone RP23-322E15 on chromosome X, complete sequence Length = 227395 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 gatcacattcatcgcccaat 576 |||||||||||||||||||| Sbjct: 77629 gatcacattcatcgcccaat 77648
>emb|AL133623.1|HSM801490 Homo sapiens mRNA; cDNA DKFZp434P0721 (from clone DKFZp434P0721); partial cds Length = 8281 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 588 tacatcaacttagctcaagttcat 611 ||||||||| |||||||||||||| Sbjct: 1980 tacatcaacatagctcaagttcat 2003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,243,417 Number of Sequences: 3902068 Number of extensions: 5243417 Number of successful extensions: 98507 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 98075 Number of HSP's gapped (non-prelim): 398 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
