>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  274 bits (138), Expect = 3e-70
 Identities = 269/312 (86%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                           
Query: 207     cagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtgaacggt 266
               |||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||| 
Sbjct: 7544479 cagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacgga 7544538

                                                                           
Query: 267     ctggaaatggcactggacgagatctcgcgtgatctggccgcctcctcaggacggatgccg 326
               ||||| ||||||||||| |||||||| |||||| |||| || || |||||| ||||||| 
Sbjct: 7544539 ctggagatggcactggatgagatctcccgtgatttggctgcttcttcaggaaggatgcca 7544598

                                                                           
Query: 327     agcagcgaacctgacatgaactgctgcatcccgagcccaaaattctggagaaaaaatgat 386
               ||||| |||||||| ||||||||||||||||  ||||| ||||||||||||| | |||||
Sbjct: 7544599 agcagtgaacctgatatgaactgctgcatccttagcccgaaattctggagaagacatgat 7544658

                                                                           
Query: 387     ggtggtagatacatttcaaggtaccccgtgtccgacctagcaaaccactctgaggaggtc 446
               ||  ||||||||   || | |||| || | |||||| |||||||| |||| ||||||  |
Sbjct: 7544659 ggcagtagatactcatccaagtactccatctccgacatagcaaactactccgaggagagc 7544718

                                                                           
Query: 447     agagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaac 506
               ||| ||||| | ||||||||||||||||||||||||||||||||||   | |||||||||
Sbjct: 7544719 agaacttcttacaagtgggagaggcagaagtttggagttcagggtg---ttgtcaccaac 7544775

                           
Query: 507     ccattagcagag 518
               ||||||||||||
Sbjct: 7544776 ccattagcagag 7544787



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                           
Query: 115     ttcagttagttcacaaagatgaagacctgtccaagatcaggatgcagctagttcagatag 174
               |||||| || |||||| || || |||||||| ||||||||||||||||| |||||||| |
Sbjct: 7543551 ttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattg 7543610

                                                  
Query: 175     agaatcagcagacaaacctgctcgaccttctccag 209
               ||||||||||||| | | ||||| | |||||||||
Sbjct: 7543611 agaatcagcagaccagcttgctcaatcttctccag 7543645



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                             
Query: 12      gggtctagagttgttccatacaacggggacggtgactcggaagaga 57
               ||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 7543475 gggtctagagttgttccatacaatggggacgatgactcggaagaga 7543520

>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0412C04
          Length = 146849

 Score =  274 bits (138), Expect = 3e-70
 Identities = 269/312 (86%), Gaps = 3/312 (0%)
 Strand = Plus / Plus

                                                                          
Query: 207    cagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtgaacggt 266
              |||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||| 
Sbjct: 104410 cagaaatttatggggagctctcagaatgggatccgttccttggagacacgggtgaacgga 104469

                                                                          
Query: 267    ctggaaatggcactggacgagatctcgcgtgatctggccgcctcctcaggacggatgccg 326
              ||||| ||||||||||| |||||||| |||||| |||| || || |||||| ||||||| 
Sbjct: 104470 ctggagatggcactggatgagatctcccgtgatttggctgcttcttcaggaaggatgcca 104529

                                                                          
Query: 327    agcagcgaacctgacatgaactgctgcatcccgagcccaaaattctggagaaaaaatgat 386
              ||||| |||||||| ||||||||||||||||  ||||| ||||||||||||| | |||||
Sbjct: 104530 agcagtgaacctgatatgaactgctgcatccttagcccgaaattctggagaagacatgat 104589

                                                                          
Query: 387    ggtggtagatacatttcaaggtaccccgtgtccgacctagcaaaccactctgaggaggtc 446
              ||  ||||||||   || | |||| || | |||||| |||||||| |||| ||||||  |
Sbjct: 104590 ggcagtagatactcatccaagtactccatctccgacatagcaaactactccgaggagagc 104649

                                                                          
Query: 447    agagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaac 506
              ||| ||||| | ||||||||||||||||||||||||||||||||||   | |||||||||
Sbjct: 104650 agaacttcttacaagtgggagaggcagaagtttggagttcagggtg---ttgtcaccaac 104706

                          
Query: 507    ccattagcagag 518
              ||||||||||||
Sbjct: 104707 ccattagcagag 104718



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                          
Query: 115    ttcagttagttcacaaagatgaagacctgtccaagatcaggatgcagctagttcagatag 174
              |||||| || |||||| || || |||||||| ||||||||||||||||| |||||||| |
Sbjct: 103482 ttcagtcaggtcacaaggaagaggacctgtcaaagatcaggatgcagcttgttcagattg 103541

                                                 
Query: 175    agaatcagcagacaaacctgctcgaccttctccag 209
              ||||||||||||| | | ||||| | |||||||||
Sbjct: 103542 agaatcagcagaccagcttgctcaatcttctccag 103576



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                            
Query: 12     gggtctagagttgttccatacaacggggacggtgactcggaagaga 57
              ||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 103406 gggtctagagttgttccatacaatggggacgatgactcggaagaga 103451

>gb|AY106868.1| Zea mays PCO072630 mRNA sequence
          Length = 1321

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 148/181 (81%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 201 cttctccagaaatttatggggagctcccagaatgggatacgttcgttggagacaagggtg 260
           ||||||||||||||||||||||  ||| |||| || || ||||| ||||||||||| |||
Sbjct: 449 cttctccagaaatttatggggaagtccgagaacggtatgcgttctttggagacaagagtg 508

                                                                       
Query: 261 aacggtctggaaatggcactggacgagatctcgcgtgatctggccgcctcctcaggacgg 320
            | || ||||| |||||  |||| |||||||| |||||| |||||  ||| |||||| ||
Sbjct: 509 catgggctggagatggctttggatgagatctctcgtgatttggccttctcttcaggaagg 568

                                                                       
Query: 321 atgccgagcagcgaacctga---catgaactgctgcatcccgagcccaaaattctggaga 377
           ||| | ||||| || |||||    | ||  |||||||| |||||||||||||||||||||
Sbjct: 569 atgtcaagcagagagcctgatgcaaagacgtgctgcattccgagcccaaaattctggaga 628

            
Query: 378 a 378
           |
Sbjct: 629 a 629



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/69 (85%), Gaps = 2/69 (2%)
 Strand = Plus / Plus

                                                                       
Query: 446 cagagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaa 505
           |||| ||||| | |||||||||||||||| ||||||  ||||||||  ||| ||||| ||
Sbjct: 697 cagaacttcttacaagtgggagaggcagaggtttgggcttcagggt--gtttgtcacaaa 754

                    
Query: 506 cccattagc 514
           |||||||||
Sbjct: 755 cccattagc 763

>ref|XM_467700.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1959

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                        
Query: 446  cagagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaa 505
            |||| ||||| | |||||||  ||||| |||||||||||||||||||| || ||||||||
Sbjct: 1800 cagaacttcttacaagtggggaaggcaaaagtttggagttcagggtggttttgtcaccaa 1859

                     
Query: 506  cccattagc 514
            ||| |||||
Sbjct: 1860 cccgttagc 1868

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                            
Query: 446      cagagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaa 505
                |||| ||||| | |||||||  ||||| |||||||||||||||||||| || ||||||||
Sbjct: 30949762 cagaacttcttacaagtggggaaggcaaaagtttggagttcagggtggttttgtcaccaa 30949703

                         
Query: 506      cccattagc 514
                ||| |||||
Sbjct: 30949702 cccgttagc 30949694

>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0516G10
          Length = 148937

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 446  cagagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaa 505
            |||| ||||| | |||||||  ||||| |||||||||||||||||||| || ||||||||
Sbjct: 4718 cagaacttcttacaagtggggaaggcaaaagtttggagttcagggtggttttgtcaccaa 4659

                     
Query: 506  cccattagc 514
            ||| |||||
Sbjct: 4658 cccgttagc 4650

>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0684F11
          Length = 147731

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                          
Query: 446    cagagcttctcataagtgggagaggcagaagtttggagttcagggtgggttcgtcaccaa 505
              |||| ||||| | |||||||  ||||| |||||||||||||||||||| || ||||||||
Sbjct: 133339 cagaacttcttacaagtggggaaggcaaaagtttggagttcagggtggttttgtcaccaa 133280

                       
Query: 506    cccattagc 514
              ||| |||||
Sbjct: 133279 cccgttagc 133271

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 197     cgaccttctccagaaatttatgg 219
               |||||||||||||||||||||||
Sbjct: 4043541 cgaccttctccagaaatttatgg 4043519

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 197     cgaccttctccagaaatttatgg 219
               |||||||||||||||||||||||
Sbjct: 4043655 cgaccttctccagaaatttatgg 4043633

>emb|AL671934.4| Human DNA sequence from clone RP11-508H18 on chromosome 6 Contains
            part of a novel gene, complete sequence
          Length = 61294

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 464  ggagaggcagaagtttggagttca 487
            |||||||||| |||||||||||||
Sbjct: 4723 ggagaggcagtagtttggagttca 4746

>emb|CR847545.11| Zebrafish DNA sequence from clone DKEY-184N3 in linkage group 5,
             complete sequence
          Length = 83135

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   aaattctggagaaaaaatga 385
             ||||||||||||||||||||
Sbjct: 71253 aaattctggagaaaaaatga 71234

>gb|AC008574.5| Homo sapiens chromosome 5 clone CTC-552D5, complete sequence
          Length = 36362

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  atagagaatcagcagacaaa 190
            ||||||||||||||||||||
Sbjct: 2202 atagagaatcagcagacaaa 2183

>gb|AC108095.2| Homo sapiens chromosome 5 clone CTD-3080F23, complete sequence
          Length = 149102

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    atagagaatcagcagacaaa 190
              ||||||||||||||||||||
Sbjct: 148884 atagagaatcagcagacaaa 148865

>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171562

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aggagtttcagtcagacaac 104
             ||||||||||||||||||||
Sbjct: 15989 aggagtttcagtcagacaac 16008

>gb|AC008553.4|AC008553 Homo sapiens chromosome 5 clone CTC-512C13, complete sequence
          Length = 91172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   atagagaatcagcagacaaa 190
             ||||||||||||||||||||
Sbjct: 22247 atagagaatcagcagacaaa 22266

>dbj|AK174016.1| Ciona intestinalis cDNA, clone:ciad017p24, full insert sequence
          Length = 2511

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 cgttggagacaagggtgaac 263
           ||||||||||||||||||||
Sbjct: 382 cgttggagacaagggtgaac 401

>emb|BX640402.2| Chicken DNA sequence from clone WAG-10A12, complete sequence
          Length = 131863

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   ataagtgggagaggcagaag 476
             ||||||||||||||||||||
Sbjct: 47637 ataagtgggagaggcagaag 47618

>dbj|AK113159.1| Ciona intestinalis cDNA, clone:ciad011e06, full insert sequence
          Length = 3319

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  cgttggagacaagggtgaac 263
            ||||||||||||||||||||
Sbjct: 1266 cgttggagacaagggtgaac 1285

>dbj|AK112318.1| Ciona intestinalis cDNA, clone:ciad019b03, full insert sequence
          Length = 1586

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  cgttggagacaagggtgaac 263
            ||||||||||||||||||||
Sbjct: 1113 cgttggagacaagggtgaac 1132

>emb|AL773592.5| Mouse DNA sequence from clone RP23-336B11 on chromosome 4, complete
              sequence
          Length = 219956

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    agttcagatagagaatcagc 183
              ||||||||||||||||||||
Sbjct: 152957 agttcagatagagaatcagc 152938


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,235,729
Number of Sequences: 3902068
Number of extensions: 4235729
Number of successful extensions: 86535
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86414
Number of HSP's gapped (non-prelim): 113
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)