| Clone Name | bags5d19 |
|---|---|
| Clone Library Name | barley_pub |
>CCL2_CAVPO (Q08782) Small inducible cytokine A2 precursor (CCL2) (Monocyte| chemotactic protein 1) (MCP-1) (Monocyte chemoattractant protein 1) Length = 120 Score = 28.9 bits (63), Expect = 5.4 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +1 Query: 265 VLRCRWLVVAVFISLPAAAIDGLDI*PCSYRFHWQLLFGLF--LERCSSSTC 414 VL C ++ A F SL A DG++ C Y F+ Q+ ER +SS C Sbjct: 6 VLLCLLVIEATFCSLLMAQPDGVNTPTCCYTFNKQIPLKRVKGYERITSSRC 57
>TBCD8_HUMAN (O95759) TBC1 domain family member 8 (Vascular| Rab-GAP/TBC-containing protein) (AD 3) Length = 897 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 260 LPSSAAGGWWLLYSSAYQLRPSTA*IYDRVVTGFTGSCCL 379 +P S G WLL+S A S Y +V G CCL Sbjct: 263 IPESLRGRLWLLFSDAVTDLASHPGYYGNLVEESLGKCCL 302
>TBCD8_MOUSE (Q9Z1A9) TBC1 domain family member 8 (Vascular| Rab-GAP/TBC-containing protein) (BUB2-like protein 1) Length = 891 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +2 Query: 260 LPSSAAGGWWLLYSSAYQLRPSTA*IYDRVVTGFTGSCCL 379 +P S G WLL+S A S Y +V G CCL Sbjct: 262 IPESLRGRLWLLFSDAVTDLASHPGYYGNLVEQSLGRCCL 301
>SPS_MAIZE (P31927) Sucrose-phosphate synthase (EC 2.4.1.14)| (UDP-glucose-fructose-phosphate glucosyltransferase) Length = 1068 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/61 (31%), Positives = 24/61 (39%) Frame = -3 Query: 418 RCMCYYCISPKTIQTAAASETGNYTVIYLSRRWPQLVG**IQQPPTTGSGGRQDSXEMYK 239 RC YC + +Q + + + YLS RW VG TG G D EM Sbjct: 947 RCHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVG---NMYLITGEHGDTDLEEMLS 1003 Query: 238 G 236 G Sbjct: 1004 G 1004
>PPME1_PONPY (Q5R4F9) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 385 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 292 QPPTTGSGGRQDSXEMYKGPG 230 +PP GSGG Q +M GPG Sbjct: 15 RPPLPGSGGSQSGAKMRMGPG 35
>PPME1_MOUSE (Q8BVQ5) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 385 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 292 QPPTTGSGGRQDSXEMYKGPG 230 +PP GSGG Q +M GPG Sbjct: 15 RPPLPGSGGSQSGAKMRMGPG 35
>PPME1_HUMAN (Q9Y570) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 385 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 292 QPPTTGSGGRQDSXEMYKGPG 230 +PP GSGG Q +M GPG Sbjct: 15 RPPLPGSGGSQSGAKMRMGPG 35
>PPME1_BOVIN (Q58DN4) Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1)| Length = 379 Score = 28.1 bits (61), Expect = 9.2 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 292 QPPTTGSGGRQDSXEMYKGPG 230 +PP GSGG Q +M GPG Sbjct: 15 RPPLPGSGGSQSGAKMRMGPG 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,643,091 Number of Sequences: 219361 Number of extensions: 603624 Number of successful extensions: 1323 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1323 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)