>emb|AL390838.26| Human DNA sequence from clone RP11-158D2 on chromosome 9 Contains a
             novel pseudogene and a novel gene, complete sequence
          Length = 193709

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 215   aacatatggtgttgtcctttat 236
             ||||||||||||||||||||||
Sbjct: 20730 aacatatggtgttgtcctttat 20751

>ref|XM_450048.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3537

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 541  ctgtgtttaactccttcagta 561
            |||||||||||||||||||||
Sbjct: 1519 ctgtgtttaactccttcagta 1499

>emb|AL627346.14| Mouse DNA sequence from clone RP23-313I9 on chromosome 11, complete
             sequence
          Length = 100292

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 455   agttctgtttctctgatgagg 475
             |||||||||||||||||||||
Sbjct: 29238 agttctgtttctctgatgagg 29258

>gb|AC152954.1| Mus musculus 6 BAC RP23-296N5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203474

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 449    atagcaagttctgtttctctg 469
              |||||||||||||||||||||
Sbjct: 127380 atagcaagttctgtttctctg 127400

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 541     ctgtgtttaactccttcagta 561
               |||||||||||||||||||||
Sbjct: 1251947 ctgtgtttaactccttcagta 1251927

>gb|AC092442.5| Homo sapiens BAC clone RP11-488I16 from 4, complete sequence
          Length = 160193

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 478   tggaaatggatgaggaatttatatattca 506
             ||||||||||||||||| | |||||||||
Sbjct: 12846 tggaaatggatgaggaaatgatatattca 12818

>dbj|AP005884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0598D02
          Length = 155238

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 541   ctgtgtttaactccttcagta 561
             |||||||||||||||||||||
Sbjct: 22951 ctgtgtttaactccttcagta 22931

>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0563F09
          Length = 174905

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 541   ctgtgtttaactccttcagta 561
             |||||||||||||||||||||
Sbjct: 82821 ctgtgtttaactccttcagta 82801

>dbj|AK101351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034O16, full
            insert sequence
          Length = 3539

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 541  ctgtgtttaactccttcagta 561
            |||||||||||||||||||||
Sbjct: 1520 ctgtgtttaactccttcagta 1500

>dbj|AK101139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026L02, full
           insert sequence
          Length = 2217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 541 ctgtgtttaactccttcagta 561
           |||||||||||||||||||||
Sbjct: 733 ctgtgtttaactccttcagta 713

>ref|NM_180252.1| Arabidopsis thaliana RAP2.2; DNA binding / transcription factor
            AT3G14230 (RAP2.2) transcript variant AT3G14230.3 mRNA,
            complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1532 tttgatctttgttatagcgt 1551

>ref|NM_180251.1| Arabidopsis thaliana RAP2.2; DNA binding / transcription factor
            AT3G14230 (RAP2.2) transcript variant AT3G14230.2 mRNA,
            complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1535 tttgatctttgttatagcgt 1554

>ref|NM_112281.2| Arabidopsis thaliana RAP2.2; DNA binding / transcription factor
            AT3G14230 (RAP2.2) transcript variant AT3G14230.1 mRNA,
            complete cds
          Length = 1644

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1547 tttgatctttgttatagcgt 1566

>ref|NM_129610.2| Arabidopsis thaliana unknown protein AT2G40480 mRNA, complete cds
          Length = 1766

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 538  ttactgtgtttaactccttcagta 561
            ||||| ||||||||||||||||||
Sbjct: 1137 ttactttgtttaactccttcagta 1114

>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete
              sequence
          Length = 1085720

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aggtgacggcaatggtgcag 66
              ||||||||||||||||||||
Sbjct: 995506 aggtgacggcaatggtgcag 995487

>gb|AY735595.1| Arabidopsis thaliana hypothetical protein AT2G40480 mRNA, complete
            cds
          Length = 1807

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 538  ttactgtgtttaactccttcagta 561
            ||||| ||||||||||||||||||
Sbjct: 1138 ttactttgtttaactccttcagta 1115

>ref|XM_567398.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNJ03180) partial mRNA
          Length = 2035

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 47  aggtgacggcaatggtgcag 66
           ||||||||||||||||||||
Sbjct: 710 aggtgacggcaatggtgcag 729

>gb|AC126027.4| Mus musculus BAC clone RP24-490F3 from chromosome 18, complete sequence
          Length = 172078

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   tttccctgcactgaaaggag 378
             ||||||||||||||||||||
Sbjct: 70349 tttccctgcactgaaaggag 70330

>gb|AC112257.5| Mus musculus BAC clone RP23-43A18 from 16, complete sequence
          Length = 199117

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   tatatattcagatggttctg 516
             ||||||||||||||||||||
Sbjct: 15394 tatatattcagatggttctg 15375

>gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete sequence
          Length = 151183

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    tttccctgcactgaaaggag 378
              ||||||||||||||||||||
Sbjct: 113433 tttccctgcactgaaaggag 113414

>gb|BT000374.1| Arabidopsis thaliana transcription factor EREBP-like protein
            (At3g14230) mRNA, complete cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1399 tttgatctttgttatagcgt 1418

>emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chromosome 11 Contains the
              Trpv3 gene for transient receptor potential cation channel
              subfamily V member 3, the Aspa gene for aspartoacylase
              (aminoacylase) 2, a novel gene, the genes for olfactory
              receptor MOR135-11, 12, 13, 2, 1, three olfactory receptor
              MOR135 pseudogenes and a CpG island, complete sequence
          Length = 208137

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 138    tccatgccacaagatggtga 157
              ||||||||||||||||||||
Sbjct: 105903 tccatgccacaagatggtga 105922

>gb|AC007187.5| Arabidopsis thaliana chromosome 2 clone F7E22 map mi421, complete
             sequence
          Length = 98432

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   gattttcttcgtgttgctgc 175
             ||||||||||||||||||||
Sbjct: 78092 gattttcttcgtgttgctgc 78111

>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete
             sequence
          Length = 84675

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 538   ttactgtgtttaactccttcagta 561
             ||||| ||||||||||||||||||
Sbjct: 51297 ttactttgtttaactccttcagta 51320

>gb|AY054539.1| Arabidopsis thaliana transcription factor EREBP-like protein
            (At3g14230; MLN21.1) mRNA, complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1419 tttgatctttgttatagcgt 1438

>emb|BX825990.1|CNS0A6BB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL77ZG04 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1585

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1521 tttgatctttgttatagcgt 1540

>emb|BX823280.1|CNS0A4T0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS1ZA09 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1512 tttgatctttgttatagcgt 1531

>gb|AC112510.9| Homo sapiens 3 BAC RP11-432A8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192749

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 549    aactccttcagtatttctca 568
              ||||||||||||||||||||
Sbjct: 121147 aactccttcagtatttctca 121128

>gb|AY085580.1| Arabidopsis thaliana clone 158240 mRNA, complete sequence
          Length = 1636

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1547 tttgatctttgttatagcgt 1566

>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21
          Length = 83906

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1341 tttgatctttgttatagcgt 1322

>gb|AC156038.2| Mus musculus BAC clone RP23-250I2 from 16, complete sequence
          Length = 202844

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    tatatattcagatggttctg 516
              ||||||||||||||||||||
Sbjct: 120788 tatatattcagatggttctg 120769

>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    cactgaaaggaggacatgat 386
              ||||||||||||||||||||
Sbjct: 339013 cactgaaaggaggacatgat 338994

>gb|AF003095.1|AF003095 Arabidopsis thaliana AP2 domain containing protein RAP2.2 mRNA,
            partial cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tttgatctttgttatagcgt 428
            ||||||||||||||||||||
Sbjct: 1013 tttgatctttgttatagcgt 1032

>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tttgctggtcaaaatctgac 136
              ||||||||||||||||||||
Sbjct: 558727 tttgctggtcaaaatctgac 558708

>dbj|AP006653.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT05M24, TM0338,
             complete sequence
          Length = 94745

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gcatgtttgatctttgttat 423
             ||||||||||||||||||||
Sbjct: 35931 gcatgtttgatctttgttat 35912



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   gcatgtttgatctttgttat 423
             ||||||||||||||||||||
Sbjct: 26906 gcatgtttgatctttgttat 26887

>emb|AL645972.10| Mouse DNA sequence from clone RP23-274J5 on chromosome 11, complete
              sequence
          Length = 192586

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 448    aatagcaagttctgtttctctgat 471
              |||||||| |||||||||||||||
Sbjct: 166856 aatagcaatttctgtttctctgat 166879

>dbj|AP000431.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B28M9,
             LL56-APP region, complete sequence
          Length = 152487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   cactgaaaggaggacatgat 386
             ||||||||||||||||||||
Sbjct: 39380 cactgaaaggaggacatgat 39361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,959,931
Number of Sequences: 3902068
Number of extensions: 5959931
Number of successful extensions: 110217
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110102
Number of HSP's gapped (non-prelim): 115
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)