ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags4o06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 317 2e-83
2dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 317 2e-83
4emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb... 317 2e-83
5dbj|AK102333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 5e-81
6emb|AJ437533.1|OSA437533 Oryza sativa partial mRNA for myosin he... 208 1e-50
7gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, co... 46 0.12
8gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete s... 46 0.12
9emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on ch... 46 0.12
10emb|AL590379.7| Human DNA sequence from clone RP11-343H6 on chro... 44 0.47
11gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, comp... 44 0.47
12gb|AC079628.20| Homo sapiens 12 BAC RP11-688K16 (Roswell Park Ca... 44 0.47
13gb|DQ308415.1| Feline immunodeficiency virus isolate Mc121 pol p... 44 0.47
14gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, compl... 44 0.47
15gb|AC134326.3| Mus musculus BAC clone RP24-262M13 from chromosom... 42 1.9
16ref|XM_655336.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.9
17emb|AL162594.13| Human DNA sequence from clone RP5-1037B23 on ch... 42 1.9
18emb|BX511225.7| Zebrafish DNA sequence from clone DKEY-28J24 in ... 42 1.9
19gb|AC073366.4| Homo sapiens chromosome 10 clone RP11-140C5, comp... 42 1.9
20gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, comple... 42 1.9
21gb|AY204752.1| Homo sapiens excision repair cross-complementing ... 42 1.9
22gb|AF178440.1|AF178440 Triatoma virus nonstructural protein prec... 42 1.9
23emb|BX293553.4| Zebrafish DNA sequence from clone CH211-256J2 in... 42 1.9
24gb|AC102501.9| Mus musculus chromosome 5, clone RP24-315J23, com... 40 7.4
25gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, com... 40 7.4
26emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in... 40 7.4
27emb|CR769781.9| Zebrafish DNA sequence from clone DKEY-215B13 in... 40 7.4
28gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
29gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete se... 40 7.4
30emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on ... 40 7.4
31emb|AL161417.17| Human DNA sequence from clone RP11-125A7 on chr... 40 7.4
32emb|AL117351.12|HSJ837O21 Human DNA sequence from clone RP5-837O... 40 7.4
33emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
34emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
35emb|CR354441.11| Zebrafish DNA sequence from clone CH211-152P23 ... 40 7.4
36emb|AL844905.5| Mouse DNA sequence from clone RP23-384C15 on chr... 40 7.4
37emb|AL121926.24|HSDJ85M6 Human DNA sequence from clone RP1-85M6 ... 40 7.4
38emb|BX548008.7| Zebrafish DNA sequence from clone DKEY-220G10 in... 40 7.4
39gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete se... 40 7.4
40gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete se... 40 7.4
41gb|AC122724.36| Medicago truncatula clone mth2-14m14, complete s... 40 7.4
42gb|AC100836.2| Homo sapiens chromosome 15, clone RP11-1084I9, co... 40 7.4
43dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 7.4
44gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, com... 40 7.4
45emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 i... 40 7.4
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
47dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
49emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in... 40 7.4
50gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, r... 40 7.4
51gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromoso... 40 7.4
52gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, r... 40 7.4
53gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complet... 40 7.4
54gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, c... 40 7.4
55gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 7.4
56dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
57emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 ... 40 7.4
58emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, c... 40 7.4
59emb|BX908394.9| Zebrafish DNA sequence from clone DKEY-106H23 in... 40 7.4
60gb|AY517478.1| Spermophilus tridecemlineatus arrestin 3 (ARR3) m... 40 7.4
61gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 11... 40 7.4
62emb|AL109985.5|CNS018P2 Human chromosome 14 DNA sequence BAC R-3... 40 7.4
63emb|CR762426.15| Zebrafish DNA sequence from clone DKEY-54K9 in ... 40 7.4
64dbj|AP002799.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.4
65dbj|AK114505.1| Ciona intestinalis cDNA, clone:cieg004i09, full ... 40 7.4
66emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chro... 40 7.4
67gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4
68gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, comple... 40 7.4
69dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.4
70gb|AC131263.6| Homo sapiens chromosome 11, clone RP11-348A11, co... 40 7.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  317 bits (160), Expect = 2e-83
 Identities = 391/468 (83%)
 Strand = Plus / Plus

                                                                           
Query: 50      atgatgcgaaggaaatgttgcagaaagtagctgaagaggaaagcacacttcggaacttag 109
               ||||||| ||||||||||| |||||||| || || ||||||||  | |||||||  ||||
Sbjct: 9912728 atgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttag 9912787

                                                                           
Query: 110     tagaatcactgaagctggagttagcagctgtaaagcaggaccacagtcaactcaaagaga 169
               |||||||||| || |  ||||||| |||||| ||| |||| ||   |||| | ||| |||
Sbjct: 9912788 tagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacaga 9912847

                                                                           
Query: 170     aggatacagatactgaatccattgttgcagatctacatgtcaagcttcagaaatgcaaat 229
               |||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||
Sbjct: 9912848 aggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaat 9912907

                                                                           
Query: 230     ctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctgatgacttga 289
               |||||||||||| ||| ||   |||||||||||||||  |  ||||||||||||||||||
Sbjct: 9912908 ctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttga 9912967

                                                                           
Query: 290     tgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaagctgaaatga 349
               || | || || |||||| ||||   |||||| |||| ||||||||| ||||||||| | |
Sbjct: 9912968 tgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaa 9913027

                                                                           
Query: 350     tgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttgcgttaactg 409
               |||| ||||||||  |||| |||||   |||||||||||| ||||| || || ||| | |
Sbjct: 9913028 tgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcag 9913087

                                                                           
Query: 410     aagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaagcagctgaag 469
               |||||||  ||| ||||||||| ||||| ||||||||||| || |||||| |||||||||
Sbjct: 9913088 aagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaag 9913147

                                                               
Query: 470     cgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
               | ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 9913148 caaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 9913195
to top
>dbj|AK070395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F09, full
            insert sequence
          Length = 2355

 Score =  317 bits (160), Expect = 2e-83
 Identities = 391/468 (83%)
 Strand = Plus / Plus

                                                                        
Query: 50   atgatgcgaaggaaatgttgcagaaagtagctgaagaggaaagcacacttcggaacttag 109
            ||||||| ||||||||||| |||||||| || || ||||||||  | |||||||  ||||
Sbjct: 1172 atgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttag 1231

                                                                        
Query: 110  tagaatcactgaagctggagttagcagctgtaaagcaggaccacagtcaactcaaagaga 169
            |||||||||| || |  ||||||| |||||| ||| |||| ||   |||| | ||| |||
Sbjct: 1232 tagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacaga 1291

                                                                        
Query: 170  aggatacagatactgaatccattgttgcagatctacatgtcaagcttcagaaatgcaaat 229
            |||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||
Sbjct: 1292 aggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaat 1351

                                                                        
Query: 230  ctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctgatgacttga 289
            |||||||||||| ||| ||   |||||||||||||||  |  ||||||||||||||||||
Sbjct: 1352 ctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttga 1411

                                                                        
Query: 290  tgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaagctgaaatga 349
            || | || || |||||| ||||   |||||| |||| ||||||||| ||||||||| | |
Sbjct: 1412 tgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaa 1471

                                                                        
Query: 350  tgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttgcgttaactg 409
            |||| ||||||||  |||| |||||   |||||||||||| ||||| || || ||| | |
Sbjct: 1472 tgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcag 1531

                                                                        
Query: 410  aagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaagcagctgaag 469
            |||||||  ||| ||||||||| ||||| ||||||||||| || |||||| |||||||||
Sbjct: 1532 aagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaag 1591

                                                            
Query: 470  cgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
            | ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 1592 caaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 1639
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  317 bits (160), Expect = 2e-83
 Identities = 391/468 (83%)
 Strand = Plus / Plus

                                                                           
Query: 50      atgatgcgaaggaaatgttgcagaaagtagctgaagaggaaagcacacttcggaacttag 109
               ||||||| ||||||||||| |||||||| || || ||||||||  | |||||||  ||||
Sbjct: 9912613 atgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttag 9912672

                                                                           
Query: 110     tagaatcactgaagctggagttagcagctgtaaagcaggaccacagtcaactcaaagaga 169
               |||||||||| || |  ||||||| |||||| ||| |||| ||   |||| | ||| |||
Sbjct: 9912673 tagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacaga 9912732

                                                                           
Query: 170     aggatacagatactgaatccattgttgcagatctacatgtcaagcttcagaaatgcaaat 229
               |||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||
Sbjct: 9912733 aggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaat 9912792

                                                                           
Query: 230     ctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctgatgacttga 289
               |||||||||||| ||| ||   |||||||||||||||  |  ||||||||||||||||||
Sbjct: 9912793 ctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttga 9912852

                                                                           
Query: 290     tgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaagctgaaatga 349
               || | || || |||||| ||||   |||||| |||| ||||||||| ||||||||| | |
Sbjct: 9912853 tgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaa 9912912

                                                                           
Query: 350     tgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttgcgttaactg 409
               |||| ||||||||  |||| |||||   |||||||||||| ||||| || || ||| | |
Sbjct: 9912913 tgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcag 9912972

                                                                           
Query: 410     aagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaagcagctgaag 469
               |||||||  ||| ||||||||| ||||| ||||||||||| || |||||| |||||||||
Sbjct: 9912973 aagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaag 9913032

                                                               
Query: 470     cgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
               | ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 9913033 caaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 9913080
to top
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140806

 Score =  317 bits (160), Expect = 2e-83
 Identities = 391/468 (83%)
 Strand = Plus / Minus

                                                                         
Query: 50    atgatgcgaaggaaatgttgcagaaagtagctgaagaggaaagcacacttcggaacttag 109
             ||||||| ||||||||||| |||||||| || || ||||||||  | |||||||  ||||
Sbjct: 19742 atgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttag 19683

                                                                         
Query: 110   tagaatcactgaagctggagttagcagctgtaaagcaggaccacagtcaactcaaagaga 169
             |||||||||| || |  ||||||| |||||| ||| |||| ||   |||| | ||| |||
Sbjct: 19682 tagaatcacttaaacaagagttagaagctgttaaggaggagcatgatcaattgaaacaga 19623

                                                                         
Query: 170   aggatacagatactgaatccattgttgcagatctacatgtcaagcttcagaaatgcaaat 229
             |||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||
Sbjct: 19622 aggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaat 19563

                                                                         
Query: 230   ctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctgatgacttga 289
             |||||||||||| ||| ||   |||||||||||||||  |  ||||||||||||||||||
Sbjct: 19562 ctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttga 19503

                                                                         
Query: 290   tgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaagctgaaatga 349
             || | || || |||||| ||||   |||||| |||| ||||||||| ||||||||| | |
Sbjct: 19502 tgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaa 19443

                                                                         
Query: 350   tgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttgcgttaactg 409
             |||| ||||||||  |||| |||||   |||||||||||| ||||| || || ||| | |
Sbjct: 19442 tgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcag 19383

                                                                         
Query: 410   aagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaagcagctgaag 469
             |||||||  ||| ||||||||| ||||| ||||||||||| || |||||| |||||||||
Sbjct: 19382 aagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaag 19323

                                                             
Query: 470   cgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
             | ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 19322 caaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 19275
to top
>dbj|AK102333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090P09, full
           insert sequence
          Length = 1632

 Score =  309 bits (156), Expect = 5e-81
 Identities = 390/468 (83%)
 Strand = Plus / Plus

                                                                       
Query: 50  atgatgcgaaggaaatgttgcagaaagtagctgaagaggaaagcacacttcggaacttag 109
           ||||||| ||||||||||| |||||||| || || ||||||||  | |||||||  ||||
Sbjct: 377 atgatgctaaggaaatgttacagaaagtggcagaggaggaaagttctcttcggagtttag 436

                                                                       
Query: 110 tagaatcactgaagctggagttagcagctgtaaagcaggaccacagtcaactcaaagaga 169
           |||||||||| || |  ||||||| |||||| ||| ||||  |   |||| | ||| |||
Sbjct: 437 tagaatcacttaaacaagagttagaagctgttaaggaggagtatgatcaattgaaacaga 496

                                                                       
Query: 170 aggatacagatactgaatccattgttgcagatctacatgtcaagcttcagaaatgcaaat 229
           |||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||
Sbjct: 497 aggatacagaaactgaatccatagttggagacctacatgtgaagcttcagaaatgcaaat 556

                                                                       
Query: 230 ctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctgatgacttga 289
           |||||||||||| ||| ||   |||||||||||||||  |  ||||||||||||||||||
Sbjct: 557 ctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctgatgacttga 616

                                                                       
Query: 290 tgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaagctgaaatga 349
           || | || || |||||| ||||   |||||| |||| ||||||||| ||||||||| | |
Sbjct: 617 tgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaagctgaagtaa 676

                                                                       
Query: 350 tgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttgcgttaactg 409
           |||| ||||||||  |||| |||||   |||||||||||| ||||| || || ||| | |
Sbjct: 677 tgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtagcattagcag 736

                                                                       
Query: 410 aagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaagcagctgaag 469
           |||||||  ||| ||||||||| ||||| ||||||||||| || |||||| |||||||||
Sbjct: 737 aagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaatcagctgaag 796

                                                           
Query: 470 cgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
           | ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 797 caaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 844
to top
>emb|AJ437533.1|OSA437533 Oryza sativa partial mRNA for myosin heavy chain-like protein (myo1
           gene)
          Length = 540

 Score =  208 bits (105), Expect = 1e-50
 Identities = 249/297 (83%)
 Strand = Plus / Plus

                                                                       
Query: 221 aatgcaaatctgagcttgaggtagctgtttgtgctgaatcaaaagctgcaacagcttctg 280
           ||||||||||||||||||||| ||| ||   |||||||||||||||  |  |||||||||
Sbjct: 1   aatgcaaatctgagcttgaggcagccgtagctgctgaatcaaaagcaacgtcagcttctg 60

                                                                       
Query: 281 atgacttgatgctagctcttcaacagctgtcgcgcgagtctaaaactgccctgcaagaag 340
           ||||||||||| | || || |||||| ||||   |||||| |||| ||||||||| ||||
Sbjct: 61  atgacttgatgttggccctccaacagttgtcttccgagtcaaaaaatgccctgcaggaag 120

                                                                       
Query: 341 ctgaaatgatgcagaagagtgcaacagagttaagaactgaagctgaagcagcacgtgttg 400
           ||||| | ||||| ||||||||  |||| |||||   |||||||||||| ||||| || |
Sbjct: 121 ctgaagtaatgcaaaagagtgctgcagatttaagggatgaagctgaagctgcacgagtag 180

                                                                       
Query: 401 cgttaactgaagctgaggaaatgttgcaatcagctttgaaagaagcagaggaagcaaaag 460
           | ||| | ||||||||  ||| ||||||||| ||||| ||||||||||| || |||||| 
Sbjct: 181 cattagcagaagctgaacaaaagttgcaatctgctttaaaagaagcagaagaggcaaaat 240

                                                                    
Query: 461 cagctgaagcgaaggcccttgatcagattaaacaactatcagacagagcaagtgctg 517
           |||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||||
Sbjct: 241 cagctgaagcaaaggcccttgatcagatcaagcaactatcagaaagagcaagcgctg 297
to top
>gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, complete sequence
          Length = 232454

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 440    aagaagcagaggaagcaaaagcagctgaagc 470
              |||||||| |||||||||||||||| |||||
Sbjct: 172977 aagaagcaaaggaagcaaaagcagcagaagc 173007
to top
>gb|AC146751.10| Medicago truncatula clone mth2-60a22, complete sequence
          Length = 119297

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 440   aagaagcagaggaagcaaaagcagctgaagc 470
             |||||||||| | ||||||||||||||||||
Sbjct: 32948 aagaagcagaagcagcaaaagcagctgaagc 32978
to top
>emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on chromosome 16, complete
             sequence
          Length = 203101

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 440   aagaagcagaggaagcaaaagcagctgaagc 470
             |||||||| |||||||||||||||| |||||
Sbjct: 51571 aagaagcaaaggaagcaaaagcagcagaagc 51601
to top
>emb|AL590379.7| Human DNA sequence from clone RP11-343H6 on chromosome X, complete
             sequence
          Length = 100545

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 441   agaagcagaggaagcaaaagca 462
             ||||||||||||||||||||||
Sbjct: 18212 agaagcagaggaagcaaaagca 18233
to top
>gb|AC119750.2| Homo sapiens chromosome 1 clone RP11-459K23, complete sequence
          Length = 171596

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 207   tgtcaagcttcagaaatgcaaa 228
             ||||||||||||||||||||||
Sbjct: 28240 tgtcaagcttcagaaatgcaaa 28219
to top
>gb|AC079628.20| Homo sapiens 12 BAC RP11-688K16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114632

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 215   ttcagaaatgcaaatctgagct 236
             ||||||||||||||||||||||
Sbjct: 28785 ttcagaaatgcaaatctgagct 28806
to top
>gb|DQ308415.1| Feline immunodeficiency virus isolate Mc121 pol protein gene, partial
            cds
          Length = 3408

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 439  aaagaagcagaggaagcaaaag 460
            ||||||||||||||||||||||
Sbjct: 1375 aaagaagcagaggaagcaaaag 1396
to top
>gb|AC099793.2| Homo sapiens chromosome 1 clone RP11-565N2, complete sequence
          Length = 169841

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 207   tgtcaagcttcagaaatgcaaa 228
             ||||||||||||||||||||||
Sbjct: 81202 tgtcaagcttcagaaatgcaaa 81181
to top
>gb|AC134326.3| Mus musculus BAC clone RP24-262M13 from chromosome 10, complete sequence
          Length = 155718

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 202    ctacatgtcaagcttcagaaatgca 226
              ||||||| |||||||||||||||||
Sbjct: 121881 ctacatgacaagcttcagaaatgca 121905
to top
>ref|XM_655336.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2824.2), mRNA
          Length = 3813

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 331  ctgcaagaagctgaaatgatgcaga 355
            ||||| |||||||||||||||||||
Sbjct: 1261 ctgcatgaagctgaaatgatgcaga 1285
to top
>emb|AL162594.13| Human DNA sequence from clone RP5-1037B23 on chromosome 1p13.1-13.3
             Contains the SYT6 gene for synaptotagmin VI and a CpG
             island, complete sequence
          Length = 114098

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 437   tgaaagaagcagaggaagcaaaagc 461
             ||||||||||| |||||||||||||
Sbjct: 84569 tgaaagaagcaaaggaagcaaaagc 84545
to top
>emb|BX511225.7| Zebrafish DNA sequence from clone DKEY-28J24 in linkage group 21,
              complete sequence
          Length = 256675

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 318    gtctaaaactgccctgcaagaagct 342
              |||||||||| ||||||||||||||
Sbjct: 125421 gtctaaaactaccctgcaagaagct 125397
to top
>gb|AC073366.4| Homo sapiens chromosome 10 clone RP11-140C5, complete sequence
          Length = 176046

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 216    tcagaaatgcaaatctgagct 236
              |||||||||||||||||||||
Sbjct: 168122 tcagaaatgcaaatctgagct 168102
to top
>gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, complete sequence
          Length = 207818

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 441    agaagcagaggaagcaaaagcagctgaag 469
              ||||||||| |||||||||||||| ||||
Sbjct: 153372 agaagcagaagaagcaaaagcagcagaag 153344
to top
>gb|AY204752.1| Homo sapiens excision repair cross-complementing rodent repair
            deficiency, complementation group 6 (ERCC6) gene,
            complete cds
          Length = 82019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  tcagaaatgcaaatctgagct 236
            |||||||||||||||||||||
Sbjct: 4711 tcagaaatgcaaatctgagct 4691
to top
>gb|AF178440.1|AF178440 Triatoma virus nonstructural protein precursor and capsid protein
            precursor, genes, partial cds
          Length = 9010

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 15   ttagaaacagttgcttctatc 35
            |||||||||||||||||||||
Sbjct: 5743 ttagaaacagttgcttctatc 5723
to top
>emb|BX293553.4| Zebrafish DNA sequence from clone CH211-256J2 in linkage group 9,
            complete sequence
          Length = 74678

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 318  gtctaaaactgccctgcaagaagct 342
            |||||||||| ||||||||||||||
Sbjct: 6124 gtctaaaactaccctgcaagaagct 6148
to top
>gb|AC102501.9| Mus musculus chromosome 5, clone RP24-315J23, complete sequence
          Length = 207791

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   aaagaagcagaggaagcaaa 458
             ||||||||||||||||||||
Sbjct: 28476 aaagaagcagaggaagcaaa 28457
to top
>gb|AC102717.11| Mus musculus chromosome 5, clone RP24-576B5, complete sequence
          Length = 161299

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   aaagaagcagaggaagcaaa 458
             ||||||||||||||||||||
Sbjct: 98703 aaagaagcagaggaagcaaa 98722
to top
>emb|BX465201.38| Zebrafish DNA sequence from clone DKEY-15F11 in linkage group 14,
              complete sequence
          Length = 262688

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    aaactgccctgcaagaagct 342
              ||||||||||||||||||||
Sbjct: 243091 aaactgccctgcaagaagct 243110
to top
>emb|CR769781.9| Zebrafish DNA sequence from clone DKEY-215B13 in linkage group 1,
             complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   aaactgccctgcaagaagct 342
             ||||||||||||||||||||
Sbjct: 78211 aaactgccctgcaagaagct 78192
to top
>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0039F06, complete sequence
          Length = 133022

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   gtgcaacagagttaagaact 378
             ||||||||||||||||||||
Sbjct: 84516 gtgcaacagagttaagaact 84497
to top
>gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete sequence
          Length = 111045

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 482   atcagattaaacaactatca 501
             ||||||||||||||||||||
Sbjct: 92167 atcagattaaacaactatca 92186
to top
>emb|Z97055.1|HS388M5 Human DNA sequence from clone RP3-388M5 on chromosome 22, complete
              sequence
          Length = 177568

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 504    cagagcaagtgctgttcaagcttc 527
              ||||||||||||||| ||||||||
Sbjct: 151604 cagagcaagtgctgtgcaagcttc 151581
to top
>emb|AL161417.17| Human DNA sequence from clone RP11-125A7 on chromosome 13, complete
              sequence
          Length = 157306

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    agtcaactcaaagagaagga 173
              ||||||||||||||||||||
Sbjct: 153061 agtcaactcaaagagaagga 153042
to top
>emb|AL117351.12|HSJ837O21 Human DNA sequence from clone RP5-837O21 on chromosome 1p22 Contains
             the 5' end of the GCLM gene for glutamate-cysteine ligase
             modifier subunit, a pseudogene similar to part of NADH
             dehydrogenase 4 (MTND4), a NADH dehydrogenase 3 (MTND3)
             pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene,
             a ATP synthase 6 (MTATP6) pseudogene, a cytochrome c
             oxidase II (MTCO2) pseudogene, a pseudogene similar to
             part of cytochrome c oxidase I (MTCO1), a pseudogene
             similar to part of NADH dehydrogenase 2 (MTND2), a
             coiled-coil-helix-coiled-coil-helix domain containing 2
             (CHCHD2) pseudogene and a CpG island, complete sequence
          Length = 93800

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    aaggaaatgttgcagaaagt 77
             ||||||||||||||||||||
Sbjct: 55507 aaggaaatgttgcagaaagt 55488
to top
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01,
             complete sequence
          Length = 143157

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   ctgaatcaaaagctgcaaca 273
             ||||||||||||||||||||
Sbjct: 81911 ctgaatcaaaagctgcaaca 81892
to top
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
              complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 254    ctgaatcaaaagctgcaaca 273
              ||||||||||||||||||||
Sbjct: 178981 ctgaatcaaaagctgcaaca 178962
to top
>emb|CR354441.11| Zebrafish DNA sequence from clone CH211-152P23 in linkage group 8,
             complete sequence
          Length = 113575

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   aaactgccctgcaagaagct 342
             ||||||||||||||||||||
Sbjct: 48147 aaactgccctgcaagaagct 48128
to top
>emb|AL844905.5| Mouse DNA sequence from clone RP23-384C15 on chromosome 4 Contains an
              NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10
              (Ndufa10) pseudogene, complete sequence
          Length = 153205

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aggatacagatactgaatcc 189
              ||||||||||||||||||||
Sbjct: 135628 aggatacagatactgaatcc 135647
to top
>emb|AL121926.24|HSDJ85M6 Human DNA sequence from clone RP1-85M6 on chromosome 11p12-13 Contains
             the CSTF3 gene for cleavage stimulation factor, 3'
             pre-RNA, subunit 3, 77kD, PIGCP1 pseudogene
             (phosphatidylinositol glycan, class C), the gene for a
             novel protein similar to testis-specific protein PBS13,
             the gene for a novel 58.3 KDA protein, ESTs, STSs, GSSs
             and CpG islands, complete sequence
          Length = 139544

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   tgaaagaagcagaggaagca 456
             ||||||||||||||||||||
Sbjct: 58417 tgaaagaagcagaggaagca 58398
to top
>emb|BX548008.7| Zebrafish DNA sequence from clone DKEY-220G10 in linkage group 23,
              complete sequence
          Length = 186246

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    aaactgccctgcaagaagct 342
              ||||||||||||||||||||
Sbjct: 124254 aaactgccctgcaagaagct 124273
to top
>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
          Length = 122876

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    gaaggaaatgttgcagaaag 76
             ||||||||||||||||||||
Sbjct: 96950 gaaggaaatgttgcagaaag 96931
to top
>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gaaggaaatgttgcagaaag 76
             ||||||||||||||||||||
Sbjct: 24754 gaaggaaatgttgcagaaag 24773
to top
>gb|AC122724.36| Medicago truncatula clone mth2-14m14, complete sequence
          Length = 122740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   atcagattaaacaactatca 501
             ||||||||||||||||||||
Sbjct: 81801 atcagattaaacaactatca 81782
to top
>gb|AC100836.2| Homo sapiens chromosome 15, clone RP11-1084I9, complete sequence
          Length = 191525

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    agctgaagaggaaagcacac 97
             ||||||||||||||||||||
Sbjct: 72225 agctgaagaggaaagcacac 72206
to top
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    ctcaaagagaaggatacaga 179
              ||||||||||||||||||||
Sbjct: 731853 ctcaaagagaaggatacaga 731872
to top
>gb|AC068181.9| Homo sapiens chromosome 15, clone RP11-673C5, complete sequence
          Length = 185255

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 418    gaaatgttgcaatcagctttgaaa 441
              ||||| ||||||||||||||||||
Sbjct: 127916 gaaattttgcaatcagctttgaaa 127893
to top
>emb|BX510931.8| Zebrafish DNA sequence from clone CH211-132M19 in linkage group 21,
              complete sequence
          Length = 181237

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    aaactgccctgcaagaagct 342
              ||||||||||||||||||||
Sbjct: 102448 aaactgccctgcaagaagct 102467
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 254      ctgaatcaaaagctgcaaca 273
                ||||||||||||||||||||
Sbjct: 30042229 ctgaatcaaaagctgcaaca 30042210
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 359      gtgcaacagagttaagaact 378
                ||||||||||||||||||||
Sbjct: 24120910 gtgcaacagagttaagaact 24120929
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 359     gtgcaacagagttaagaact 378
               ||||||||||||||||||||
Sbjct: 4424484 gtgcaacagagttaagaact 4424503
to top
>emb|BX004830.7| Zebrafish DNA sequence from clone CH211-159I8 in linkage group 14,
             complete sequence
          Length = 201070

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   aaactgccctgcaagaagct 342
             ||||||||||||||||||||
Sbjct: 18639 aaactgccctgcaagaagct 18658
to top
>gb|AC008219.4|AC008219 Drosophila melanogaster, chromosome 3R, region 100A-100A, BAC clone
              BACR03C06, complete sequence
          Length = 156335

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    aagaagctgaaatgatgcag 354
              ||||||||||||||||||||
Sbjct: 136134 aagaagctgaaatgatgcag 136153
to top
>gb|AC147317.3| Pan troglodytes BAC clone RP43-49P4 from chromosome 7, complete sequence
          Length = 196949

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 441    agaagcagaggaagcaaaagcagc 464
              ||||||||| ||||||||||||||
Sbjct: 170233 agaagcagaagaagcaaaagcagc 170210
to top
>gb|AC007975.7|AC007975 Drosophila melanogaster, chromosome 3R, region 100A-100B, BAC clone
             BACR06P08, complete sequence
          Length = 180630

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   aagaagctgaaatgatgcag 354
             ||||||||||||||||||||
Sbjct: 82426 aagaagctgaaatgatgcag 82445
to top
>gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complete sequence
          Length = 188164

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gaagagtgcaacagagttaa 373
              ||||||||||||||||||||
Sbjct: 123796 gaagagtgcaacagagttaa 123815
to top
>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   gaaatgttgcaatcagctttgaaa 441
             ||||| ||||||||||||||||||
Sbjct: 25884 gaaattttgcaatcagctttgaaa 25861
to top
>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 241    gtagctgtttgtgctgaatcaaaa 264
              ||||||| ||||||||||||||||
Sbjct: 718042 gtagctgcttgtgctgaatcaaaa 718065
to top
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1279D09
          Length = 134793

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    gtgcaacagagttaagaact 378
              ||||||||||||||||||||
Sbjct: 127302 gtgcaacagagttaagaact 127321
to top
>emb|AL954695.14| Zebrafish DNA sequence from clone CH211-202N12 in linkage group 1,
              complete sequence
          Length = 207004

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    aaactgccctgcaagaagct 342
              ||||||||||||||||||||
Sbjct: 150614 aaactgccctgcaagaagct 150595
to top
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence
          Length = 241975

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 323    aaactgccctgcaagaagct 342
              ||||||||||||||||||||
Sbjct: 205493 aaactgccctgcaagaagct 205474
to top
>emb|BX908394.9| Zebrafish DNA sequence from clone DKEY-106H23 in linkage group 18,
             complete sequence
          Length = 102817

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 323   aaactgccctgcaagaagct 342
             ||||||||||||||||||||
Sbjct: 96590 aaactgccctgcaagaagct 96609
to top
>gb|AY517478.1| Spermophilus tridecemlineatus arrestin 3 (ARR3) mRNA, complete cds
          Length = 1311

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 tgaagctggagttagcagct 138
           ||||||||||||||||||||
Sbjct: 849 tgaagctggagttagcagct 830
to top
>gb|AE003776.2| Drosophila melanogaster chromosome 3R, section 114 of 118 of the
             complete sequence
          Length = 225764

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   aagaagctgaaatgatgcag 354
             ||||||||||||||||||||
Sbjct: 77052 aagaagctgaaatgatgcag 77071
to top
>emb|AL109985.5|CNS018P2 Human chromosome 14 DNA sequence BAC R-370E23 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 186548

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 431    cagctttgaaagaagcagaggaag 454
              |||||| |||||||||||||||||
Sbjct: 102699 cagcttggaaagaagcagaggaag 102676
to top
>emb|CR762426.15| Zebrafish DNA sequence from clone DKEY-54K9 in linkage group 1,
             complete sequence
          Length = 164460

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   aaactgccctgcaagaagct 342
             ||||||||||||||||||||
Sbjct: 18459 aaactgccctgcaagaagct 18440
to top
>dbj|AP002799.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-806N19, complete
              sequence
          Length = 177564

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    cacagtcaactcaaagagaa 170
              ||||||||||||||||||||
Sbjct: 175009 cacagtcaactcaaagagaa 175028
to top
>dbj|AK114505.1| Ciona intestinalis cDNA, clone:cieg004i09, full insert sequence
          Length = 1390

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 tcaaaagctgcaacagcttc 278
           ||||||||||||||||||||
Sbjct: 953 tcaaaagctgcaacagcttc 934
to top
>emb|AL691450.15| Mouse DNA sequence from clone RP23-20F9 on chromosome 2, complete
             sequence
          Length = 181372

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   tgttgcgttaactgaagctg 415
             ||||||||||||||||||||
Sbjct: 77123 tgttgcgttaactgaagctg 77104
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 359      gtgcaacagagttaagaact 378
                ||||||||||||||||||||
Sbjct: 24432579 gtgcaacagagttaagaact 24432598
to top
>gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, complete sequence
          Length = 161505

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   taaacaactatcagacagag 508
             ||||||||||||||||||||
Sbjct: 61772 taaacaactatcagacagag 61753
to top
>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020,
            complete sequence
          Length = 80920

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  acatgtcaagcttcagaaat 223
            ||||||||||||||||||||
Sbjct: 2160 acatgtcaagcttcagaaat 2141
to top
>gb|AC131263.6| Homo sapiens chromosome 11, clone RP11-348A11, complete sequence
          Length = 179568

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    tgaaagaagcagaggaagca 456
              ||||||||||||||||||||
Sbjct: 123402 tgaaagaagcagaggaagca 123383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,799,546
Number of Sequences: 3902068
Number of extensions: 5799546
Number of successful extensions: 117188
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116867
Number of HSP's gapped (non-prelim): 320
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top