ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags5d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
2dbj|AK062131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 240 4e-60
3dbj|AK066418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 6e-50
4emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 127 5e-26
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 127 5e-26
8emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 127 5e-26
9emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 127 5e-26
10gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete s... 62 2e-06
11gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete se... 62 2e-06
12gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete s... 62 2e-06
13emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in... 48 0.034
14gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, comp... 44 0.53
15ref|NM_100715.2| Arabidopsis thaliana hydrolase/ protein serine/... 42 2.1
16gb|AC133507.4| Mus musculus BAC clone RP24-112C17 from chromosom... 42 2.1
17gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosom... 42 2.1
18gb|AC124397.5| Mus musculus BAC clone RP24-348J16 from chromosom... 42 2.1
19emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on ch... 42 2.1
20dbj|AK034079.1| Mus musculus adult male diencephalon cDNA, RIKEN... 42 2.1
21gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete se... 42 2.1
22ref|NM_128279.3| Arabidopsis thaliana hydrolase/ protein serine/... 40 8.3
23ref|XM_656127.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.3
24emb|AL591624.6| Human DNA sequence from clone RP11-143A22 on chr... 40 8.3
25emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chr... 40 8.3
26emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chro... 40 8.3
27emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H1... 40 8.3
28emb|BX538019.1|HSM806172 Homo sapiens genomic DNA; cDNA DKFZp686... 40 8.3
29gb|AC083886.19| Homo sapiens 3 BAC RP11-364F11 (Roswell Park Can... 40 8.3
30emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chro... 40 8.3
31gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell... 40 8.3
32gb|AC099730.2| Homo sapiens chromosome 11, clone RP11-48F13, com... 40 8.3
33gb|AC091146.8| Homo sapiens chromosome 11, clone RP11-884J20, co... 40 8.3
34gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 40 8.3
35emb|AL035464.20|HS1043E3 Human DNA sequence from clone RP5-1043E... 40 8.3
36gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.3 
>dbj|AK065064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J19, full
            insert sequence
          Length = 3803

 Score =  240 bits (121), Expect = 4e-60
 Identities = 195/219 (89%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
            ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 2901 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 2960

                                                                        
Query: 68   ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
            || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 2961 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 3020

                                                                        
Query: 128  caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
            ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 3021 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 3080

                                                   
Query: 188  aatgaccgagcaggccctcttgcatggatatagcagctt 226
            ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 3081 aatgaccg---aggctctcttgcatggatatagtagctt 3116
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>dbj|AK062131.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E05, full
           insert sequence
          Length = 1102

 Score =  240 bits (121), Expect = 4e-60
 Identities = 195/219 (89%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
           ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 260 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 319

                                                                       
Query: 68  ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
           || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 320 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 379

                                                                       
Query: 128 caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
           ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 380 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 439

                                                  
Query: 188 aatgaccgagcaggccctcttgcatggatatagcagctt 226
           ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 440 aatgaccg---aggctctcttgcatggatatagtagctt 475
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>dbj|AK066418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067H19, full
            insert sequence
          Length = 3349

 Score =  206 bits (104), Expect = 6e-50
 Identities = 158/176 (89%)
 Strand = Plus / Plus

                                                                        
Query: 8    ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
            ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 3174 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 3233

                                                                        
Query: 68   ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
            || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 3234 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 3293

                                                                    
Query: 128  caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagc 183
            ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 3294 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagc 3349
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128559

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 8     ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
             ||||| ||||||||| |||| || ||||||||||| || |||||||| ||||||||||||
Sbjct: 43889 ggtgctatcttagttttgggcagagatcttgtggtcgttccaaaactgattcatcctttg 43830

                                                                         
Query: 68    ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
             || || || || ||||| |||||||| || |||||||| |||||||||||||||||||||
Sbjct: 43829 cccccggcaatcacatcacctgagacctctccggagcatcatattgaggacacatggatg 43770

                 
Query: 128   cagg 131
             ||||
Sbjct: 43769 cagg 43766



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 143   aacaggccaccaactccaaccaggggccgccctcaag 179
             ||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 43660 aacagaccaccgactccaacaaggggccgcccccaag 43624
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                            
Query: 8        ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
                ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 26341424 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 26341365

                                                                            
Query: 68       ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
                || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 26341364 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 26341305

                    
Query: 128      cagg 131
                ||||
Sbjct: 26341304 cagg 26341301



 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                            
Query: 128      caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
                ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 26341207 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 26341148

                                                       
Query: 188      aatgaccgagcaggccctcttgcatggatatagcagctt 226
                ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 26341147 aatgaccg---aggctctcttgcatggatatagtagctt 26341112
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                            
Query: 8        ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
                ||||| ||||||||| |||| || ||||||||||| || |||||||| ||||||||||||
Sbjct: 24848261 ggtgctatcttagttttgggcagagatcttgtggtcgttccaaaactgattcatcctttg 24848202

                                                                            
Query: 68       ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
                || || || || ||||| |||||||| || |||||||| |||||||||||||||||||||
Sbjct: 24848201 cccccggcaatcacatcacctgagacctctccggagcatcatattgaggacacatggatg 24848142

                    
Query: 128      cagg 131
                ||||
Sbjct: 24848141 cagg 24848138



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 143      aacaggccaccaactccaaccaggggccgccctcaag 179
                ||||| ||||| |||||||| ||||||||||| ||||
Sbjct: 24848032 aacagaccaccgactccaacaaggggccgcccccaag 24847996
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                            
Query: 8        ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
                ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 26269592 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 26269533

                                                                            
Query: 68       ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
                || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 26269532 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 26269473

                    
Query: 128      cagg 131
                ||||
Sbjct: 26269472 cagg 26269469



 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                            
Query: 128      caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
                ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 26269375 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 26269316

                                                       
Query: 188      aatgaccgagcaggccctcttgcatggatatagcagctt 226
                ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 26269315 aatgaccg---aggctctcttgcatggatatagtagctt 26269280
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133978

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                          
Query: 8      ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
              ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 105408 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 105349

                                                                          
Query: 68     ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
              || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 105348 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 105289

                  
Query: 128    cagg 131
              ||||
Sbjct: 105288 cagg 105285



 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                          
Query: 128    caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
              ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 105191 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 105132

                                                     
Query: 188    aatgaccgagcaggccctcttgcatggatatagcagctt 226
              ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 105131 aatgaccg---aggctctcttgcatggatatagtagctt 105096
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                         
Query: 8     ggtgcaatcttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttg 67
             ||||||||||| ||||| ||||| |||||||| || || || |||||||| |||||||||
Sbjct: 55696 ggtgcaatcttggttctaggaagagatcttgtagtagttccgaaactcatccatcctttg 55637

                                                                         
Query: 68    ccacctgccattacatctcctgagacatccccggagcaccatattgaggacacatggatg 127
             || ||||||||||||||||| ||||| || || ||||| ||| |||||||||||||||||
Sbjct: 55636 ccgcctgccattacatctcccgagacctctccagagcatcatcttgaggacacatggatg 55577

                 
Query: 128   cagg 131
             ||||
Sbjct: 55576 cagg 55573



 Score =  121 bits (61), Expect = 3e-24
 Identities = 90/99 (90%), Gaps = 3/99 (3%)
 Strand = Plus / Minus

                                                                         
Query: 128   caggaactaaacgccaacaggccaccaactccaaccaggggccgccctcaagcagctaac 187
             ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 55479 caggaactaaatgccaacaggccgccaactccaacaaggggccgccctcaagcagcaaac 55420

                                                    
Query: 188   aatgaccgagcaggccctcttgcatggatatagcagctt 226
             ||||||||   |||| ||||||||||||||||| |||||
Sbjct: 55419 aatgaccg---aggctctcttgcatggatatagtagctt 55384
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>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence
          Length = 115804

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 17   ttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttgccacctgc 75
            |||||| ||||||||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 5692 ttagttttgggaagggatcttgtggtggttcctaaactgattcatccattaccacctgc 5634
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>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence
          Length = 147062

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 17     ttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttgccacctgc 75
              |||||| ||||||||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 141371 ttagttttgggaagggatcttgtggtggttcctaaactgattcatccattaccacctgc 141429
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>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence
          Length = 117901

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 17    ttagttctgggaagggatcttgtggttgtcccaaaactcattcatcctttgccacctgc 75
             |||||| ||||||||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 66977 ttagttttgggaagggatcttgtggtggttcctaaactgattcatccattaccacctgc 67035
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>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete
              sequence
          Length = 231807

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 108    atattgaggacacatggatgcagg 131
              ||||||||||||||||||||||||
Sbjct: 144715 atattgaggacacatggatgcagg 144738
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>gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, complete sequence
          Length = 154446

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 52    actcattcatcctttgccacct 73
             ||||||||||||||||||||||
Sbjct: 49681 actcattcatcctttgccacct 49702
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>ref|NM_100715.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase
            AT1G08420 mRNA, complete cds
          Length = 3243

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 107  catattgaggacacatggatgcaggaactaaacgccaacaggcca 151
            ||||| || ||||||||||||||||| || ||||| || ||||||
Sbjct: 3133 catatagaagacacatggatgcaggagctgaacgcaaataggcca 3177
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>gb|AC133507.4| Mus musculus BAC clone RP24-112C17 from chromosome 13, complete
             sequence
          Length = 187080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    catcctttgccacctgccatt 79
             |||||||||||||||||||||
Sbjct: 18251 catcctttgccacctgccatt 18271
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>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete
             sequence
          Length = 178519

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 122   tggatgcaggaactaaacgccaacaggcc 150
             |||||||||||||| || |||||||||||
Sbjct: 41718 tggatgcaggaactcaatgccaacaggcc 41746
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>gb|AC124397.5| Mus musculus BAC clone RP24-348J16 from chromosome 13, complete
            sequence
          Length = 191713

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 59   catcctttgccacctgccatt 79
            |||||||||||||||||||||
Sbjct: 8686 catcctttgccacctgccatt 8666
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>emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on chromosome X Contains a
             novel pseudogene and a lactate dehydrogenase B pseudogene,
             complete sequence
          Length = 155885

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 498   cctgcctgctaggcttcacct 518
             |||||||||||||||||||||
Sbjct: 78143 cctgcctgctaggcttcacct 78163
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>dbj|AK034079.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330154M02 product:Rho interacting protein
            2, full insert sequence
          Length = 3532

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 59   catcctttgccacctgccatt 79
            |||||||||||||||||||||
Sbjct: 2623 catcctttgccacctgccatt 2603
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>gb|AC152930.2| Xenopus tropicalis clone ISB1-158G10, complete sequence
          Length = 95175

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   gctatatttatcattctgtcc 295
             |||||||||||||||||||||
Sbjct: 50780 gctatatttatcattctgtcc 50800
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>ref|NM_128279.3| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase
            AT2G27210 mRNA, complete cds
          Length = 3816

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 107  catattgaggacacatggatgcaggaactaaacgccaacaggccaccaactccaac 162
            ||||| ||||| ||||||||||||||  ||||||  || || |||||||| |||||
Sbjct: 3183 catatagaggatacatggatgcaggagttaaacgtaaatagaccaccaacaccaac 3238
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>ref|XM_656127.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3615.2), mRNA
          Length = 3150

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 195  gagcaggccctcttgcatgg 214
            ||||||||||||||||||||
Sbjct: 2683 gagcaggccctcttgcatgg 2702
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>emb|AL591624.6| Human DNA sequence from clone RP11-143A22 on chromosome 6 Contains a
              novel gene and a CpG island, complete sequence
          Length = 146887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    attgaggacacatggatgcaggaa 133
              |||||| |||||||||||||||||
Sbjct: 140563 attgagaacacatggatgcaggaa 140586



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   attgaggacacatggatgcaggaa 133
             |||||| |||||||||||||||||
Sbjct: 74292 attgagaacacatggatgcaggaa 74315
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>emb|AL445250.4| Human DNA sequence from clone RP11-199A24 on chromosome 6 Contains a CpG
              island, complete sequence
          Length = 178384

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    attgaggacacatggatgcaggaa 133
              |||||| |||||||||||||||||
Sbjct: 140612 attgagaacacatggatgcaggaa 140589



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   attgaggacacatggatgcaggaa 133
             |||||| |||||||||||||||||
Sbjct: 74340 attgagaacacatggatgcaggaa 74317
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>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three
              novel genes, the 5' end of a novel gene, a novel pseudogene
              and seven CpG islands, complete sequence
          Length = 165696

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 581    ggagggggtggcagaaggggatga 604
              ||||| ||||||||||||||||||
Sbjct: 104234 ggaggaggtggcagaaggggatga 104211
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>emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H10 on chromosome 6q16.1-16.3,
             complete sequence
          Length = 150355

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 430   cagagctctccaagctttttccct 453
             |||||||||||||||| |||||||
Sbjct: 47010 cagagctctccaagctctttccct 47033
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>emb|BX538019.1|HSM806172 Homo sapiens genomic DNA; cDNA DKFZp686G2346 (from clone
            DKFZp686G2346)
          Length = 6117

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  ccatattgaggacacatgga 125
            ||||||||||||||||||||
Sbjct: 4413 ccatattgaggacacatgga 4394
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>gb|AC083886.19| Homo sapiens 3 BAC RP11-364F11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 94535

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 586   gggtggcagaaggggatgatagtg 609
             |||||| |||||||||||||||||
Sbjct: 92292 gggtgggagaaggggatgatagtg 92315
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>emb|BX088558.3| Mouse DNA sequence from clone RP23-252M5 on chromosome 4, complete
              sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    atgtctccgtcagtgggttc 272
              ||||||||||||||||||||
Sbjct: 101302 atgtctccgtcagtgggttc 101321
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>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute
             Drosophila BAC library) complete sequence
          Length = 169138

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   acaacaacaatggcaacagg 355
             ||||||||||||||||||||
Sbjct: 96830 acaacaacaatggcaacagg 96849
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>gb|AC099730.2| Homo sapiens chromosome 11, clone RP11-48F13, complete sequence
          Length = 169549

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   ccatattgaggacacatgga 125
             ||||||||||||||||||||
Sbjct: 90280 ccatattgaggacacatgga 90299
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>gb|AC091146.8| Homo sapiens chromosome 11, clone RP11-884J20, complete sequence
          Length = 138053

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ccatattgaggacacatgga 125
             ||||||||||||||||||||
Sbjct: 24406 ccatattgaggacacatgga 24387
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>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
              sequence
          Length = 294272

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 336    acaacaacaatggcaacagg 355
              ||||||||||||||||||||
Sbjct: 164549 acaacaacaatggcaacagg 164568
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>emb|AL035464.20|HS1043E3 Human DNA sequence from clone RP5-1043E3 on chromosome 6p21.1-21.2,
             complete sequence
          Length = 126368

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tgaggacacatggatgcagg 131
             ||||||||||||||||||||
Sbjct: 79296 tgaggacacatggatgcagg 79277
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 581     ggagggggtggcagaaggggatga 604
               ||||||||||||||| ||||||||
Sbjct: 1360624 ggagggggtggcagagggggatga 1360647


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,750,915
Number of Sequences: 3902068
Number of extensions: 4750915
Number of successful extensions: 82950
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82825
Number of HSP's gapped (non-prelim): 119
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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