>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915|
          Length = 463

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 37/132 (28%), Positives = 67/132 (50%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           +YN+L   + K G   EA  V  +    AG+    D+Y+ L++A C+   +D+A++ + E
Sbjct: 120 SYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKE 179

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDR 370
           M +SRF P+  +   ++N  C +  +  +K    E++ +   P+ + Y  +L LY +  R
Sbjct: 180 M-QSRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRR 238

Query: 371 WADAYDLLEEMK 406
                 L  EMK
Sbjct: 239 IRRGLQLFLEMK 250



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 29/132 (21%), Positives = 62/132 (46%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           TYN L N   K      A+ + + +  S G   +  +Y  +++ Y +  ++   ++ ++E
Sbjct: 190 TYNILINGLCKSRRVGTAKWMLTELKKS-GYTPNAVTYTTILKLYFKTRRIRRGLQLFLE 248

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDR 370
           M++  +  D  +   V++A    G   E+ E  +E+        I++Y  +L+LY ++  
Sbjct: 249 MKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGN 308

Query: 371 WADAYDLLEEMK 406
                DLL E++
Sbjct: 309 LDAVDDLLGEIE 320



 Score = 33.9 bits (76), Expect = 0.35
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
 Frame = +2

Query: 53  FREAESVFSRMTNSA--GIQKSKDSYDALIEAYCQGSQLDDAVKAYMEMRKSRFNPDERS 226
           FR+ E   S + +    G+     +Y+ LI  YC+   +++A      MR +   PD  +
Sbjct: 26  FRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVAT 85

Query: 227 LEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDRWADAYDLL 394
              ++       ++D     F+E+      P + +Y  ++  Y +  +  +A+ +L
Sbjct: 86  YNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVL 141

>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
            (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
 Frame = +2

Query: 14   YNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYMEM 193
            +NS+ +   K G   E+E +F  M    G++ +  +Y+ LI  YC   ++D+A+K    M
Sbjct: 479  FNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 194  RKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDRW 373
                  P+  +   ++N YC    ++++   F+E+ S+   P II Y ++L    +  R 
Sbjct: 538  VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 374  ADAYDL---LEEMKTNRASNTHQVIA-SMIKGEYDDSSNWQMVEYVLDSSNLEGCDYSLR 541
            A A +L   + E  T    +T+ +I   + K +  D +        L    LE      R
Sbjct: 598  AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA-----R 652

Query: 542  FFNALLDVL 568
             FN ++D L
Sbjct: 653  TFNIMIDAL 661



 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 33/131 (25%), Positives = 66/131 (50%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           +Y ++ N F K G   +A S +  M +  GI     +Y+++I A C+   +D A++    
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDR-GILPDVVTYNSIIAALCKAQAMDKAMEVLNT 256

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDR 370
           M K+   PD  +   +L+ YC +G   E+    +++RS+   P ++ Y +++    +N R
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 371 WADAYDLLEEM 403
             +A  + + M
Sbjct: 317 CMEARKIFDSM 327



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 35/147 (23%), Positives = 63/147 (42%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           TYNS+     K     +A  V + M  + G+     +Y++++  YC   Q  +A+    +
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDR 370
           MR     PD  +   +++  C  G   E+++ F+ +      P I  Y  +L  YA    
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 371 WADAYDLLEEMKTNRASNTHQVIASMI 451
             + + LL+ M  N     H V + +I
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILI 378



 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 32/136 (23%), Positives = 70/136 (51%)
 Frame = +2

Query: 14  YNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYMEM 193
           YNSL +       +  AE +   M +  GI  +   ++++I+++C+  ++ ++ K +  M
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 194 RKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDRW 373
            +    P+  +   ++N YC+AG +DE+ +    + S    P+ + Y  +++ Y +  R 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 374 ADAYDLLEEMKTNRAS 421
            DA  L +EM+++  S
Sbjct: 563 EDALVLFKEMESSGVS 578



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 32/131 (24%), Positives = 60/131 (45%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           TY +L   +A  G   E   +   M  + GI      +  LI AY +  ++D A+  + +
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMMLSLYARNDR 370
           MR+   NP+  +   V+   C +G ++++   FE++      P  I Y  ++      ++
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 371 WADAYDLLEEM 403
           W  A +L+ EM
Sbjct: 457 WERAEELILEM 467



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/111 (24%), Positives = 51/111 (45%)
 Frame = +2

Query: 11  TYNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYME 190
           TYN +     +      A+ ++ R+T S G Q    +Y+ ++   C+    DDA++ +  
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITES-GTQIELSTYNIILHGLCKNKLTDDALQMFQN 641

Query: 191 MRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPSIIAYCMM 343
           +       + R+   +++A    G  DE+K+ F    SN  VP+   Y +M
Sbjct: 642 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

>LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)|
           (Leucine-rich PPR motif-containing protein)
          Length = 1273

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 22/90 (24%), Positives = 47/90 (52%)
 Frame = +2

Query: 14  YNSLANVFAKGGLFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDDAVKAYMEM 193
           +++L    A+ G    AE++ + M + AGI+   D+Y AL+ AY +   +D   +   ++
Sbjct: 114 FSALVTGHARAGDMENAENILTVMRD-AGIEPGPDTYLALLNAYAEKGDIDHVKQTLEKV 172

Query: 194 RKSRFNPDERSLEGVLNAYCIAGVIDESKE 283
            K   +  +R L  ++ ++  AG +  S++
Sbjct: 173 EKFELHLMDRDLLQIIFSFSKAGYLSMSQK 202

>GNT1_CANAL (Q59ZI3) Glucose N-acetyltransferase 1 (EC 2.4.1.-)|
           (N-acetylglucosaminyltransferase)
          Length = 462

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +2

Query: 299 RSNMAVPS-IIAYCMMLSLYARNDRWADAYDLLEEMKTNRASNTHQVIASMIKGEYDDSS 475
           ++N  +P+ +I Y  +L  YA +D+W++ Y +  + K    +      A +IK  Y D S
Sbjct: 95  KANTKIPNLVIIYDEVLHYYA-SDKWSELYQVANQYKITLKA------APLIKASYQDDS 147

Query: 476 NW 481
           NW
Sbjct: 148 NW 149

>V109_FOWPV (P36317) Virion release protein (Protein F12 homolog)|
          Length = 630

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +2

Query: 206 FNPDERSLEGVLNAYCIAGVIDESKEQFEEIRSNMAVPS-IIAYC 337
           +  DE+SL+G L +Y + G + E     +  R+N+++ S II+YC
Sbjct: 557 YTHDEKSLQGYLFSYLLKGNVTEDVLAMKSCRNNLSIISFIISYC 601

>HTK7_HYDAT (Q25197) Putative insulin-like peptide receptor precursor (EC|
            2.7.10.1)
          Length = 1477

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +2

Query: 437  IASMIKGEYDDSSNWQMVEYVLDSSNL---EGCDYSLRFFNAL 556
            I ++    Y   +N Q++ +VL + +L   EGCDY LR F +L
Sbjct: 1245 ICTLASQPYQGKTNEQVLNFVLSNGHLDYPEGCDYQLREFMSL 1287

>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I|
          Length = 1261

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 13/144 (9%)
 Frame = +2

Query: 14   YNSLANVFAKGGLFREAESVFS------RMTNSAGIQKSKDSYDALIEAYCQGSQLDDAV 175
            Y +L +V +K   F   + VF       R  ++  ++K+      +++A    S      
Sbjct: 810  YPTLISVLSKNKRFDAVQRVFEHSKHLYRKISTKSLEKANWFMALILDAMILSSSFARQF 869

Query: 176  KAYM----EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQ---FEEIRSNMAVPSIIAY 334
            K+       M+   + P   +   ++N     G  D++      FEE + +   PS+  Y
Sbjct: 870  KSSNLFCDNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLY 929

Query: 335  CMMLSLYARNDRWADAYDLLEEMK 406
              +LS   R  R  + + L +EMK
Sbjct: 930  NAVLSKLGRARRTTECWKLFQEMK 953

>PTP99_DROME (P35832) Tyrosine-protein phosphatase 99A precursor (EC 3.1.3.48)|
            (Receptor-linked protein-tyrosine phosphatase 99A)
            (DPTP99A)
          Length = 1301

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 512  YCCQGHIQPFAN*SYHRTPPLSWKQSLDVYY*HDLFSFLPAN 387
            YC   ++  +A   YH   P  W  S D+   +++ SFLP N
Sbjct: 979  YCSTANVYQYAK-LYHNKRPGVWTSSEDIRVIYNILSFLPGN 1019

>HTPG_FUSNN (Q8RGH4) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 607

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 17  NSLANVFAKGGLFREAESVFSRMTNSAGIQKSK 115
           NS +++ AKGGL  E E   S MTN+  + K++
Sbjct: 517 NSASSLLAKGGLSLEMEKTLSEMTNNNDMPKAE 549

>HEMH2_BACCR (Q81GN7) Ferrochelatase 2 (EC 4.99.1.1) (Protoheme ferro-lyase 2)|
           (Heme synthetase 2)
          Length = 319

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
 Frame = +2

Query: 113 KDSYDALIEAYCQGSQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDE----SK 280
           K     L+ AY     LDD    Y  +R  R  P E +LE ++  Y   G I      +K
Sbjct: 3   KKKIGLLVMAYGTPESLDDVEAYYTHIRHGR-KPSEEALEDLIGRYKAIGGISPLAKITK 61

Query: 281 EQFEEIRSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASNTHQVI 439
           EQ  ++  +M   +I                    D +EEMK N    T  ++
Sbjct: 62  EQAHKLTDSM--NNIFTEYEFTCYLGLKHTAPFIEDAVEEMKRNGIEQTISIV 112

>VATA_PYRAB (Q9UXU7) V-type ATP synthase alpha chain (EC 3.6.3.14) (V-type ATPase|
            subunit A) [Contains: Pab atpA intein (Pab VMA intein)]
          Length = 1017

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +2

Query: 122  YDALIEAYCQGSQLDDAVKAYM--EMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEE 295
            YD  +EA  +G  L++  K  +  E+ + +F PD   ++ +         ID++ EQFEE
Sbjct: 960  YDKTMEAISRGVPLEEIAKLPVREEIGRMKFEPDVGKIKAL---------IDKTNEQFEE 1010

Query: 296  I 298
            +
Sbjct: 1011 L 1011

>GPSM2_HUMAN (P81274) G-protein signaling modulator 2 (Mosaic protein LGN)|
          Length = 677

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +2

Query: 50  LFREAESVFSRMTNSAGIQKSKDSYDALIEAYCQGSQLDD 169
           L + ++SV S +  +   +  +D +D L++  CQGS+LDD
Sbjct: 567 LTQNSQSVLSHLMTNDNKEADEDFFDILVK--CQGSRLDD 604


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,598,194
Number of Sequences: 219361
Number of extensions: 1549520
Number of successful extensions: 4043
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4041
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)