ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags5c13 |
|---|---|
| Clone Library Name | barley_pub |
>MTHR_ORYSA (Q75HE6) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 594 Score = 243 bits (620), Expect(2) = 4e-67 Identities = 113/122 (92%), Positives = 118/122 (96%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 DNEEAVKAYGIHLGTEMCKKILA+GIKTLHLYTLNMEK+AL ILMNLGLIEESK+SR+LP Sbjct: 254 DNEEAVKAYGIHLGTEMCKKILATGIKTLHLYTLNMEKSALGILMNLGLIEESKISRSLP 313 Query: 183 WRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDHQFTRP 362 WRPPTNVFRVKEDVRPIFWANRPKSYISRT GWDQYP GRWGDSRNPSYGAL D+QFTRP Sbjct: 314 WRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRP 373 Query: 363 RG 368 RG Sbjct: 374 RG 375 Score = 29.6 bits (65), Expect(2) = 4e-67 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +1 Query: 367 GRGKKLQEEWAV 402 GRGKKLQEEWAV Sbjct: 375 GRGKKLQEEWAV 386
>MTHR1_MAIZE (Q9SE94) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| (ZmMTHFR1) Length = 593 Score = 234 bits (596), Expect(2) = 2e-64 Identities = 107/122 (87%), Positives = 114/122 (93%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 DNEEAV+ YGIHLGTEMCKKILA+GIKTLHLYTLNM+K+A+ ILMNLGLIEESK+SR LP Sbjct: 254 DNEEAVRQYGIHLGTEMCKKILATGIKTLHLYTLNMDKSAIGILMNLGLIEESKVSRPLP 313 Query: 183 WRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDHQFTRP 362 WRP TNVFRVKEDVRPIFWANRPKSY+ RT GWDQYP GRWGDSRNPSYGAL DHQFTRP Sbjct: 314 WRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRP 373 Query: 363 RG 368 RG Sbjct: 374 RG 375 Score = 29.6 bits (65), Expect(2) = 2e-64 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = +1 Query: 367 GRGKKLQEEWAV 402 GRGKKLQEEWAV Sbjct: 375 GRGKKLQEEWAV 386
>MTHR2_ARATH (O80585) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| (AtMTHFR2) Length = 594 Score = 223 bits (567), Expect(2) = 1e-58 Identities = 101/121 (83%), Positives = 114/121 (94%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 DNEEAVKAYGIHLGTEMCKK+LA G+K+LHLYTLNMEK+ALAILMNLG+I+ESK+SR+LP Sbjct: 254 DNEEAVKAYGIHLGTEMCKKMLAHGVKSLHLYTLNMEKSALAILMNLGMIDESKISRSLP 313 Query: 183 WRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDHQFTRP 362 WR P NVFR KEDVRPIFWANRPKSYISRT GW+ +PQGRWGDSR+ SYGAL+DHQF+RP Sbjct: 314 WRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQFSRP 373 Query: 363 R 365 R Sbjct: 374 R 374 Score = 21.9 bits (45), Expect(2) = 1e-58 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 Query: 370 RGKKLQEEWAV 402 R KKLQ+EW V Sbjct: 376 RDKKLQQEWVV 386
>MTHR1_ARATH (Q9SE60) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| (AtMTHFR1) Length = 592 Score = 202 bits (513), Expect = 2e-52 Identities = 90/122 (73%), Positives = 106/122 (86%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 DN+EAVKAYGIH TEMCKKILA GI +LHLYTLN++K+A+ ILMNLGLI+ESK+SR+LP Sbjct: 254 DNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKSAIGILMNLGLIDESKISRSLP 313 Query: 183 WRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDHQFTRP 362 WR P NVFR KEDVRPIFWANRPKSYISRT GW+ +P GRWGDS + +Y L+D+QF RP Sbjct: 314 WRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHGRWGDSHSAAYSTLSDYQFARP 373 Query: 363 RG 368 +G Sbjct: 374 KG 375
>MTHR_HUMAN (P42898) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 656 Score = 120 bits (302), Expect = 6e-28 Identities = 57/116 (49%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASG-IKTLHLYTLNMEKTALAILMNLGLIEESKLSRTL 179 DN+ A++ YGI L +C+++LASG + LH YTLN E +L LG+ E R L Sbjct: 289 DNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP-RRPL 347 Query: 180 PWRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 PW + R +EDVRPIFWA+RPKSYI RT WD++P GRWG+S +P++G L D+ Sbjct: 348 PWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDY 403
>MTHR_MOUSE (Q9WU20) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 654 Score = 120 bits (300), Expect = 1e-27 Identities = 56/116 (48%), Positives = 77/116 (66%), Gaps = 1/116 (0%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASG-IKTLHLYTLNMEKTALAILMNLGLIEESKLSRTL 179 DN+ A++ YGI L +C+++L SG + LH YTLN E + +L LG+ E R L Sbjct: 288 DNDAAIRNYGIELAVRLCRELLDSGLVPGLHFYTLNREVATMEVLKQLGMWTEDP-RRPL 346 Query: 180 PWRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 PW + R +EDVRPIFWA+RPKSYI RT WD++P GRWG+S +P++G L D+ Sbjct: 347 PWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDY 402
>MTHR_MACFA (Q60HE5) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 656 Score = 120 bits (300), Expect = 1e-27 Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 1/116 (0%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASG-IKTLHLYTLNMEKTALAILMNLGLIEESKLSRTL 179 DN+ A++ YGI L +C ++LASG + LH YTLN E +L LG+ E R L Sbjct: 289 DNDAAIRNYGIELAVSLCHELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP-RRPL 347 Query: 180 PWRPPTNVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 PW + R +EDVRPIFWA+RPKSYI RT WD++P GRWG+S +P++G L D+ Sbjct: 348 PWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDY 403
>MTHR1_SCHPO (Q10258) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| Length = 603 Score = 109 bits (273), Expect = 1e-24 Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 9/119 (7%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 D++E V+ G+ L EMC+K++ASGI LH YT+N+EK I+ LGL++E+ P Sbjct: 245 DDDEGVRERGVELIVEMCRKLIASGITRLHFYTMNLEKAVKMIIERLGLLDEN----LAP 300 Query: 183 WRPPTNVF---------RVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYG 332 NV R+ E VRPIFW R +SY+SRT WD+ P GRWGDSR+P++G Sbjct: 301 IVDTNNVELTNASSQDRRINEGVRPIFWRTRNESYVSRTDQWDELPHGRWGDSRSPAFG 359
>MTHR2_YEAST (P53128) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| Length = 599 Score = 105 bits (263), Expect = 2e-23 Identities = 55/121 (45%), Positives = 80/121 (66%), Gaps = 8/121 (6%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASG-IKTLHLYTLNMEKTALAILMNLGLIE-ESKLSR- 173 D++E V+ G +L EMC+K+L SG + LH+YT+N+EK L IL L ++ ES+ + Sbjct: 249 DDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLEKAPLMILERLNILPTESEFNAH 308 Query: 174 ---TLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTTGW--DQYPQGRWGDSRNPSYGAL 338 LPWR N R E+VRPIFW RP SY++RT+ W D++P GR+GDS +P++G L Sbjct: 309 PLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQWAVDEFPNGRFGDSSSPAFGDL 368 Query: 339 N 341 + Sbjct: 369 D 369
>MTHR_CAEEL (Q17693) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 663 Score = 99.4 bits (246), Expect = 2e-21 Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 2/116 (1%) Frame = +3 Query: 6 NEEAVKAYGIHLGTEMCKKILASGIK-TLHLYTLNMEKTALAILMNLGLIEESKLSRTLP 182 +++AV+ YG EMC+++L +G ++HLYT+N E + IL +LGL + R P Sbjct: 303 DDDAVQKYGTERCIEMCRRLLDNGTAPSIHLYTMNREGSIREILKSLGLWKLEG-DRVFP 361 Query: 183 WRPPT-NVFRVKEDVRPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 W+ + + R E VRPI+W+ RP+SYI+RT WDQ+P GRWG+S +P++G ++ + Sbjct: 362 WKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFPNGRWGNSSSPAFGDVSSY 417
>MTHR2_SCHPO (O74927) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| Length = 641 Score = 46.2 bits (108), Expect = 2e-05 Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 48/162 (29%) Frame = +3 Query: 6 NEEAVKAYGIHLGTEMCKKILAS---GIKTLHLYTLNMEKTALAILMNLGLI-------- 152 ++EA+K G+ +M KKI+ + + H TLN+E++ IL N GL+ Sbjct: 256 DDEAIKNIGVEHIVDMIKKIMDNVQGRVHGFHFCTLNLERSVALILKNSGLLTKRWKQVE 315 Query: 153 ---EESKLSRT------------------LPWRPP-----TNVFRVKEDV---------- 224 E+ KL RT +P + P +N+F + Sbjct: 316 SEMEDEKLLRTTRKRLSLDEPAELHNQVVVPSQQPVADKSSNLFVTSKQSSVSGHKDNLT 375 Query: 225 -RPIFWANRPKSYISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 F + + R WD + GR+GD R+P+YG ++ + Sbjct: 376 EEAPFSVSEGSGVLGRQANWDDFTNGRFGDPRSPAYGEIDGY 417
>METF_STRLI (O54235) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 307 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 D+ AV++ GI TE C ++LA G+ LH TLN L I NLGL Sbjct: 253 DDPAAVRSIGIEFATEFCARLLAEGVPGLHFITLNNSTATLEIYENLGL 301
>MTHR1_YEAST (P46151) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| Length = 657 Score = 39.7 bits (91), Expect = 0.002 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +3 Query: 261 ISRTTGWDQYPQGRWGDSRNPSYGALNDH 347 + R WD++P GR+GDSR+P+YG ++ + Sbjct: 402 LGRDATWDEFPNGRFGDSRSPAYGEIDGY 430 Score = 30.8 bits (68), Expect = 0.81 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = +3 Query: 6 NEEAVKAYGIHLGTEMCKKIL---ASGIKTLHLYTLNMEKTALAIL 134 ++ AVK+ G+ + E+ ++I + IK H YTLN+EK I+ Sbjct: 253 DDNAVKSIGVDILIELIQEIYQRTSGRIKGFHFYTLNLEKAIAQIV 298
>METF_SHIFL (P0AEZ2) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 296 Score = 36.2 bits (82), Expect = 0.019 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 D+ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 244 DDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>METF_ECOLI (P0AEZ1) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 296 Score = 36.2 bits (82), Expect = 0.019 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 D+ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 244 DDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>METF_SALTY (P11003) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 296 Score = 34.7 bits (78), Expect = 0.056 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 3 DNE-EAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 DN+ E K G ++ +M K + G+K H YTLN + + AI LG+ Sbjct: 243 DNDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>METF_AQUAE (O67422) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 296 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +3 Query: 3 DNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAI 131 D E VK GI C ++ G+ LH YTLN L I Sbjct: 241 DKPEEVKKIGIEFAINQCLDLIEHGVPGLHFYTLNKSDATLKI 283
>METF_BUCAI (P57154) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 292 Score = 34.3 bits (77), Expect = 0.073 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +3 Query: 21 KAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 K G + +M KK+ G+K H YTLN +I LGL Sbjct: 250 KIIGSSIAIDMVKKLSCEGVKNFHFYTLNQSDITYSICHILGL 292
>METF_PECCC (P71319) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 298 Score = 33.9 bits (76), Expect = 0.095 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 3 DNE-EAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 DN+ E K G + +M K + G+K H YTLN + + AI LG+ Sbjct: 243 DNDPETRKMVGASIAMDMVKILSREGVKDFHFYTLNRAELSYAICHTLGV 292
>HCF_DROME (Q9V4C8) Host cell factor (dHcf) [Contains: HCF N-terminal chain;| HCF C-terminal chain] Length = 1500 Score = 33.9 bits (76), Expect = 0.095 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Frame = -2 Query: 273 WSLKCNSLVCW--PRI*GEHPL*HGKH*--LVASKVMFLKAWIPLLIQDSSELLKRSFPC 106 W L+ +S+ W P+ GE PL H ++ +K+ W+PL+I DS +R + C Sbjct: 275 WLLETDSMT-WSKPKTSGEAPLPRSLHSSTMIGNKMYVFGGWVPLVINDSKSTTEREWKC 333
>DSC1_MOUSE (P55849) Desmocollin-1 precursor| Length = 886 Score = 33.1 bits (74), Expect = 0.16 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Frame = +3 Query: 9 EEAVKAYGIHLGTEMCKKILASG-IKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLPW 185 EE +K+ + L ++ +IL G I T H L+ EK +IL++ G +E K + Sbjct: 53 EECLKSPSLILSSDPAFRILEDGTIYTTHDLLLSSEKRGFSILLSDGQGQEQKKLEVVLS 112 Query: 186 RPPTNVFRVKEDVRPIF------WANRPKSYISRTTGWDQYPQ 296 VFR + P+ WA P S + + G +PQ Sbjct: 113 AREKKVFRKRHTKEPVHNRSKRRWAPIPCSLMENSLG--PFPQ 153
>METF_BUCAP (Q8KA62) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 292 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +3 Query: 12 EAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKTALAILMNLGL 149 E K G ++ + K +L G+K H YTLN +I GL Sbjct: 247 ETQKIIGSNIVINIVKTLLYEGVKNFHFYTLNKSDVIYSICHMFGL 292
>METF_BUCBP (Q89B13) 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 295 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 30 GIHLGTEMCKKILASGIKTLHLYTLNMEKTALAI 131 G + +M K + + GI++ H YTLN + + AI Sbjct: 254 GSSIAIDMVKVLYSEGIRSFHFYTLNKSEISFAI 287
>LCAT_ELIQU (O35573) Phosphatidylcholine-sterol acyltransferase (EC 2.3.1.43)| (Lecithin-cholesterol acyltransferase) (Phospholipid-cholesterol acyltransferase) (Fragment) Length = 299 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +3 Query: 93 LYTLNMEKTALAILMNLGLIEESKLSRTLPWRPPTN 200 LY L ++ + I+ ++ L+EE +++ T PW P++ Sbjct: 134 LYFLLLQPQGIPIMSSIKLVEEQRITTTSPWMFPSH 169
>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9| Length = 728 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 291 PQGRWGDSRNPSYGALNDHQFTRPRGP 371 P G +G + NP+Y +++ RPRGP Sbjct: 335 PTGAYGRNNNPNYNGGYNNRLPRPRGP 361
>ECTC_BACPA (Q9AP33) L-ectoine synthase (EC 4.2.1.-) (N-acetyldiaminobutyrate| dehydratase) Length = 134 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = +1 Query: 238 GPTDQRV--TFQGPLVGINTHRGGGVIP 315 G TD R+ TF PLVG TH GV P Sbjct: 98 GKTDMRLICTFNPPLVGTETHDENGVYP 125
>CPNE2_MOUSE (P59108) Copine-2 (Copine II)| Length = 548 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = +1 Query: 154 RNPSFQEHYLGGHQLMFSVSKRMFALYSGPTD 249 RN SF ++ LGG QLMF+V A P D Sbjct: 292 RNYSFLDYILGGCQLMFTVGIDFTASNGNPLD 323
>SMYD3_HUMAN (Q9H7B4) SET and MYND domain-containing protein 3 (EC 2.1.1.43)| (Zinc finger MYND domain-containing protein 1) Length = 428 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +3 Query: 51 MCKKILASGIKTL---HLYTLNMEKTALAILMNLGLIEESKLSRTLPWRPPTNVFRVKED 221 MC+ I++S + L ++Y L + A+ +NLGL+EE+ T P F Sbjct: 308 MCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 367 Query: 222 VRPI 233 VR + Sbjct: 368 VRGV 371
>ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)| Length = 306 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 238 GPTDQRVTFQGPLVGIN-THRGGGVIPGTHHTEPLMTTSSHGHVGRGK 378 GPT T GI H G GV+ TH P T ++HG +G G+ Sbjct: 127 GPTGIGGTHGVGSTGIGGAHGGTGVLGQTHGMGPTGTGAAHGGLGTGQ 174
>RS8_AERPE (Q9YF89) 30S ribosomal protein S8P| Length = 135 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 276 GWDQYPQGRWGDSRNPSYGALNDHQFTRPRGP 371 G++ GRWG R G +ND +PR P Sbjct: 51 GFEYIDDGRWGKFRVKLLGRINDIGVVKPRTP 82
>Y1306_AGRT5 (Q8UFU1) UPF0078 membrane protein Atu1306/AGR_C_2402| Length = 205 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 260 VTLWSVGPEYRANILFDTENISWWPPR 180 V LW +GPE A ++ ISWW R Sbjct: 161 VALWVLGPEKTAMLVTLLSVISWWKHR 187
>DNBI_HHV7J (P52339) Major DNA-binding protein (MDBP)| Length = 1131 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/55 (23%), Positives = 30/55 (54%) Frame = -1 Query: 280 QPVVLEM*LFGLLAQNIGRTSSLTRKTLVGGLQGNVLESLDSSINPRFIRIAKAV 116 Q V+ L ++ + + R + + ++ G N++ESL +S+NP + +A+ + Sbjct: 980 QKFVIATKLCDIIVKKVKREAIVYDVEVIRGKVLNIIESLSNSVNPELLILAEVM 1034
>DYHG_CHLRE (Q39575) Dynein gamma chain, flagellar outer arm| Length = 4485 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/70 (27%), Positives = 26/70 (37%) Frame = +3 Query: 60 KILASGIKTLHLYTLNMEKTALAILMNLGLIEESKLSRTLPWRPPTNVFRVKEDVRPIFW 239 +IL S N+ + A + G+I S + L W PP + K D W Sbjct: 2202 RILMSAAMKAMFEPENLNNASPATVSRAGIIYVSDVE--LGWEPPVKSWLQKRDPTEACW 2259 Query: 240 ANRPKSYISR 269 A YI R Sbjct: 2260 ARLFSKYIDR 2269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,611,050 Number of Sequences: 219361 Number of extensions: 1591642 Number of successful extensions: 3940 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3772 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3916 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
