Clone Information

BLAST Search Result

Clone Name	bags5c09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ILVH_SYNY3 (Q55141) Acetolactate synthase small subunit (EC 2.2....	132	4e-31
2	ILVH_CYACA (Q9TLY1) Acetolactate synthase small subunit (EC 2.2....	132	4e-31
3	ILVH_GUITH (O78451) Acetolactate synthase small subunit (EC 2.2....	129	6e-30
4	ILVH_GALSU (Q9MS98) Acetolactate synthase small subunit (EC 2.2....	125	5e-29
5	ILVH_PORPU (P51230) Acetolactate synthase small subunit (EC 2.2....	124	2e-28
6	ILVH_ARCFU (O28555) Probable acetolactate synthase small subunit...	114	1e-25
7	ILVH_MYCTU (P65161) Acetolactate synthase small subunit (EC 2.2....	112	5e-25
8	ILVH_MYCBO (P65162) Acetolactate synthase small subunit (EC 2.2....	112	5e-25
9	ILVH_AQUAE (O67703) Acetolactate synthase small subunit (EC 2.2....	110	3e-24
10	ILVH_METTH (O27492) Probable acetolactate synthase small subunit...	105	6e-23
11	ILVH_MYCLE (O33113) Acetolactate synthase small subunit (EC 2.2....	103	2e-22
12	ILVH_METJA (Q57625) Probable acetolactate synthase small subunit...	98	2e-20
13	ILVH_MYCAV (Q59499) Acetolactate synthase small subunit (EC 2.2....	96	6e-20
14	ILVH_BACSU (P37252) Acetolactate synthase small subunit (EC 2.2....	91	2e-18
15	ILVH_LACLA (Q02140) Acetolactate synthase small subunit (EC 2.2....	84	2e-16
16	ILVH_ECOLI (P00894) Acetolactate synthase isozyme III small subu...	83	5e-16
17	ILVH_SALTY (P21622) Acetolactate synthase isozyme III small subu...	80	3e-15
18	ILVH_BUCAI (P57320) Acetolactate synthase small subunit (EC 2.2....	77	2e-14
19	ILVH_BUCAP (O85294) Acetolactate synthase small subunit (EC 2.2....	74	2e-13
20	ILVH_HAEIN (P45260) Acetolactate synthase small subunit (EC 2.2....	74	3e-13
21	ILVH_BUCBP (Q89AP8) Acetolactate synthase small subunit (EC 2.2....	66	6e-11
22	ILV6_YEAST (P25605) Acetolactate synthase small subunit, mitocho...	52	1e-06
23	Y849_METTH (O26937) Hypothetical protein MTH849	33	0.60
24	Y055_MYCLE (O33089) Hypothetical protein ML0055	31	1.8
25	DNLI_METMP (Q6LYM1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleo...	31	1.8
26	RL36_CAEEL (P49181) 60S ribosomal protein L36	31	2.3
27	AHPF_SALTY (P19480) Alkyl hydroperoxide reductase subunit F (EC ...	30	3.0
28	ARGB_SULAC (Q4JAQ2) Acetylglutamate/acetylaminoadipate kinase (E...	30	3.9
29	PEPB_SALTY (Q9RF52) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)	30	5.1
30	PEPB_SALTI (Q8Z4N3) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)	30	5.1
31	PEPB_SALCH (Q57LH5) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)	30	5.1
32	IF2_WOLTR (Q5GS99) Translation initiation factor IF-2	30	5.1
33	ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associate...	30	5.1
34	HSP1_TRAVT (Q7JIY0) Sperm protamine P1	29	6.7
35	HSP1_SEMEN (Q9GJR3) Sperm protamine P1	29	6.7
36	ADY3_YEAST (Q07732) Accumulates dyads protein 3	29	6.7
37	ABCF2_HUMAN (Q9UG63) ATP-binding cassette sub-family F member 2 ...	29	6.7
38	AHPF_ECOLI (P35340) Alkyl hydroperoxide reductase subunit F (EC ...	29	6.7
39	RL2_METKA (Q8TY93) 50S ribosomal protein L2P	29	6.7
40	PHEB_CLOAB (Q97JN9) ACT domain protein pheB	29	8.7
41	GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)	29	8.7
42	Y181_METJA (Q57640) Hypothetical protein MJ0181	29	8.7
43	POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP12...	29	8.7

>ILVH_SYNY3 (Q55141) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 172

 Score =  132 bits (333), Expect = 4e-31
 Identities = 70/129 (54%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
 Frame = +1

Query: 13  NIESLAVGLNK--DKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIESLAVG  +  D +  T+VV G +  ++Q+ +QL KLVNV+ V+D+++   VERELML
Sbjct: 29  NIESLAVGSAEQGDVSRITMVVPGDENTIEQLTKQLYKLVNVIKVQDITETPCVERELML 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           +K++     RA+V+ +A VFRA++VDISE+++T+EV GDPGK+VA  + L+KFGIKE+ R
Sbjct: 89  VKVSANAPNRAEVIELAQVFRARIVDISEDTVTIEVVGDPGKMVAILQMLAKFGIKEVAR 148

Query: 367 TGKIALRRE 393
           TGKIAL RE
Sbjct: 149 TGKIALVRE 157

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>ILVH_CYACA (Q9TLY1) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 172

 Score =  132 bits (333), Expect = 4e-31
 Identities = 70/128 (54%), Positives = 94/128 (73%), Gaps = 2/128 (1%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIESLAVG  + K +   T+VV G DR ++Q+ +QL KLVN+L V+++++   VEREL+L
Sbjct: 29  NIESLAVGPAEQKGISRITMVVPGDDRTVEQLTKQLYKLVNILKVDNITEIPCVERELIL 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           +K+N     R +++ +  VFRAKVVD+SEN L LE+TGDPGK+ A Q+ L KFGI EI R
Sbjct: 89  VKINASTSSRPEILSILQVFRAKVVDLSENLLVLELTGDPGKVAAIQQLLQKFGIIEIAR 148

Query: 367 TGKIALRR 390
           TGKIAL R
Sbjct: 149 TGKIALTR 156

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>ILVH_GUITH (O78451) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 169

 Score =  129 bits (323), Expect = 6e-30
 Identities = 71/129 (55%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIESLAVG  +   +   T+VV   +R ++Q+ +QL KLVN+L VED++    VERELML
Sbjct: 29  NIESLAVGPTEKLGISRITMVVPSDERTIEQLTKQLYKLVNILKVEDITNLPTVERELML 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           IKL V   +R + + +  +FRAKVVD+SE+ L +EVTGDPGKIVA ++ LSKF I EI R
Sbjct: 89  IKLRVSTFERTEALDIINIFRAKVVDLSEDFLIIEVTGDPGKIVAIEQILSKFTISEIVR 148

Query: 367 TGKIALRRE 393
           TGKI+L RE
Sbjct: 149 TGKISLVRE 157

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>ILVH_GALSU (Q9MS98) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 181

 Score =  125 bits (315), Expect = 5e-29
 Identities = 64/129 (49%), Positives = 95/129 (73%), Gaps = 2/129 (1%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NI+SLAVG  +   +   T+V+ G +R+++Q+ + L KLVNVL ++D++    VERELML
Sbjct: 29  NIDSLAVGPAEKAGISRITMVIRGDNRIIEQITKHLYKLVNVLKIQDITNIPCVERELML 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           IK+    ++R +++ +A +FRA+VVD+SE+ + LE+TGDPGKI A ++ L K+GI EI R
Sbjct: 89  IKVKTGENKRNEILEIANIFRARVVDLSESFIILEITGDPGKIAAIEKLLEKYGICEIAR 148

Query: 367 TGKIALRRE 393
           TGKIAL RE
Sbjct: 149 TGKIALTRE 157

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>ILVH_PORPU (P51230) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 174

 Score =  124 bits (310), Expect = 2e-28
 Identities = 67/128 (52%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NI SLAVG  +   +   T+VV G +R ++Q+ +QL KLVN+LNV+D++    VERELML
Sbjct: 29  NIASLAVGPAEQIGVSRITMVVQGDNRTIEQLTKQLYKLVNILNVQDVTNIPSVERELML 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           IK+ V    R + + +  +FRA VVDI+E+ + +EVTGDPGKIVA ++ L+KFGI EI R
Sbjct: 89  IKIQVNSQNRIEALEIVKIFRANVVDIAEDLIIVEVTGDPGKIVAIEQLLTKFGIIEIAR 148

Query: 367 TGKIALRR 390
           TGKI+L R
Sbjct: 149 TGKISLVR 156

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>ILVH_ARCFU (O28555) Probable acetolactate synthase small subunit (EC 2.2.1.6)|
           (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 159

 Score =  114 bits (286), Expect = 1e-25
 Identities = 58/128 (45%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
 Frame = +1

Query: 13  NIESLAVGLNK--DKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIESL VG  +  D +  TIVV G D+V++QVI+QLNKL+  + V +++ E+ VEREL L
Sbjct: 29  NIESLTVGTTERDDLSRMTIVVEGDDKVVEQVIKQLNKLIETIKVSEIT-ESSVERELCL 87

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICR 366
           I+++  P++R +++ +  +FRA++VD+S +S  +EVTGD  K+ A    + ++GIKE+ R
Sbjct: 88  IRVHAPPEKRGEIVELTNIFRARIVDVSRDSFIIEVTGDEDKVSAFIDLMRQYGIKELAR 147

Query: 367 TGKIALRR 390
           TGK+A+ R
Sbjct: 148 TGKVAMVR 155

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>ILVH_MYCTU (P65161) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 168

 Score =  112 bits (281), Expect = 5e-25
 Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
 Frame = +1

Query: 1   SARG-NIESLAVGLN--KDKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESLAVG    KD++  TIVVS  D  L+Q+ +QLNKL+NV+ + +   E  V 
Sbjct: 27  SRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQITKQLNKLINVIKIVEQDDEHSVS 86

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGI 351
           REL LIK+  +   R+ V+    +FRA V+D+S  SLT+E TG+ GK+ A  R L  FGI
Sbjct: 87  RELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLTVEATGNRGKLEALLRVLEPFGI 146

Query: 352 KEICRTGKIALRR 390
           +EI ++G ++L R
Sbjct: 147 REIAQSGMVSLSR 159

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>ILVH_MYCBO (P65162) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 168

 Score =  112 bits (281), Expect = 5e-25
 Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
 Frame = +1

Query: 1   SARG-NIESLAVGLN--KDKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESLAVG    KD++  TIVVS  D  L+Q+ +QLNKL+NV+ + +   E  V 
Sbjct: 27  SRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQITKQLNKLINVIKIVEQDDEHSVS 86

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGI 351
           REL LIK+  +   R+ V+    +FRA V+D+S  SLT+E TG+ GK+ A  R L  FGI
Sbjct: 87  RELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLTVEATGNRGKLEALLRVLEPFGI 146

Query: 352 KEICRTGKIALRR 390
           +EI ++G ++L R
Sbjct: 147 REIAQSGMVSLSR 159

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>ILVH_AQUAE (O67703) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 192

 Score =  110 bits (274), Expect = 3e-24
 Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIE L+VG   +K +   TI V G D V++QV++QL +L++ L V DL+    VEREL L
Sbjct: 54  NIEGLSVGETHEKGISRMTIEVIGDDIVIEQVVKQLRRLIDTLKVSDLTDVPHVERELAL 113

Query: 187 IKLNVEPDQRA--DVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEI 360
           IK+   P  RA  +V+ +  +FR KVVD+S ++ T+EVTGD  KI A    L  FGIKE+
Sbjct: 114 IKVYT-PSSRARDEVLRITEIFRGKVVDVSPDTYTIEVTGDEDKINAMIELLKPFGIKEM 172

Query: 361 CRTGKIALRRE 393
            RTGK+A+RRE
Sbjct: 173 ARTGKVAMRRE 183

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>ILVH_METTH (O27492) Probable acetolactate synthase small subunit (EC 2.2.1.6)|
           (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 168

 Score =  105 bits (263), Expect = 6e-23
 Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 3/129 (2%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIE++ VG ++   +   TI+  G DRVL+Q+ +QLNKL++V+ V DL   A V+REL +
Sbjct: 35  NIENITVGESETPGIARMTIIARGDDRVLEQITKQLNKLIDVIKVRDLEPAATVKRELCM 94

Query: 187 IKLNVEPD-QRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEIC 363
           +K++   + +R++++    +FR ++VD+S ++LT+EVTGD  KI A    L  FGIKE+ 
Sbjct: 95  VKVHAPSESERSEIIQYTNIFRGRIVDVSPDALTVEVTGDSEKIDAFLELLRNFGIKELA 154

Query: 364 RTGKIALRR 390
           RTG  A+ R
Sbjct: 155 RTGPTAMSR 163

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>ILVH_MYCLE (O33113) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 169

 Score =  103 bits (258), Expect = 2e-22
 Identities = 61/133 (45%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESLAVG  + K +   TIVVS  +  L+QV +QL+KL+NV+ V +   +  + 
Sbjct: 28  SRRGFNIESLAVGATECKTMSRMTIVVSAEETPLEQVTKQLHKLINVIKVVEQEADNSLS 87

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGI 351
           REL LIK+  E   R+ V+    +FRA+V+D+S  SLT+E TGD  KI A  R L  FG+
Sbjct: 88  RELALIKVRAEAGTRSQVIEAVHLFRARVIDVSLESLTVEATGDCSKIEALLRVLEPFGV 147

Query: 352 KEICRTGKIALRR 390
           +EI ++G ++L R
Sbjct: 148 REIVQSGVVSLSR 160

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>ILVH_METJA (Q57625) Probable acetolactate synthase small subunit (EC 2.2.1.6)|
           (AHAS) (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 172

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 55/129 (42%), Positives = 84/129 (65%), Gaps = 3/129 (2%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NI S+ VG+ ++  +   TIVV+G D++L+QVI+QLNKL++V+ V +L ++  V+REL L
Sbjct: 35  NISSITVGITENPQISRVTIVVNGDDKILEQVIKQLNKLIDVIKVSELEEKKSVQRELCL 94

Query: 187 IKLNVEPDQ-RADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEIC 363
           IK+    +  ++ V+   ++FR  VVD+S  SL +E+TG   KI A    +   GIKE+ 
Sbjct: 95  IKIYAPTESAKSQVIQYTSIFRGNVVDLSPESLIVEITGSEDKINAFIDLVKPLGIKEMA 154

Query: 364 RTGKIALRR 390
           RTG  AL R
Sbjct: 155 RTGITALAR 163

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>ILVH_MYCAV (Q59499) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 167

 Score = 95.9 bits (237), Expect = 6e-20
 Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1   SARG-NIESLAVGLN--KDKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESLAVG    KD +  TIVVS  +  L+Q+ +QLNKL+NV+ + +L     V 
Sbjct: 27  SRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITKQLNKLINVIKIVELEDGNSVS 86

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNL 336
           REL LIK+  +   R+ V+    +FRAKV+D+S  +LT+E TGD GKI A  R L
Sbjct: 87  RELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTIEATGDRGKIEALLRVL 141

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>ILVH_BACSU (P37252) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 174

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
 Frame = +1

Query: 13  NIESLAVGLNK----DKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVEREL 180
           NIES+ VG  +     +  F + V G + V +Q+ +QLNK ++VL V D++ ++ V+REL
Sbjct: 29  NIESITVGHTETAGVSRITFVVHVEGENDV-EQLTKQLNKQIDVLKVTDITNQSIVQREL 87

Query: 181 MLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEI 360
            LIK+   P  R ++  +   FRA VVD+S +S+ ++VTG+  KI A    L  +GIKEI
Sbjct: 88  ALIKVVSAPSTRTEINGIIEPFRASVVDVSRDSIVVQVTGESNKIEALIELLKPYGIKEI 147

Query: 361 CRTGKIALRR 390
            RTG  A  R
Sbjct: 148 ARTGTTAFAR 157

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>ILVH_LACLA (Q02140) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 158

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL----FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVEREL 180
           NI S+  G+ + + L    F I V   D V +Q+I+QLN+L++V+ V D++    VERE+
Sbjct: 29  NILSITAGVTESQDLTHTTFVIEVDHLDEV-EQIIKQLNRLIDVIEVADITDLPHVEREV 87

Query: 181 MLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEI 360
           +LIK++  P  RA++  +   FR  VVD++  ++T+++TGD  KI A    +S +GI  +
Sbjct: 88  VLIKVSAPPTIRAEIFTMIEPFRVNVVDVNLENVTIQLTGDSAKIEALIDVVSPYGILNM 147

Query: 361 CRTGKIALRR 390
            RTG     R
Sbjct: 148 ARTGSAGFER 157

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>ILVH_ECOLI (P00894) Acetolactate synthase isozyme III small subunit (EC|
           2.2.1.6) (AHAS-III) (Acetohydroxy-acid synthase III
           small subunit) (ALS-III)
          Length = 163

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESL V    D  L   TI   G ++VL+Q+ +QL+KLV+VL V +L + A VE
Sbjct: 24  SQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVE 83

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKI---VAAQRNLSK 342
           RE+ML+K+      R +V     +FR +++D++ +  T+++ G  GK+   +A+ R+++K
Sbjct: 84  REIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAK 143

Query: 343 FGIKEICRTGKIALRR 390
             I E+ R+G + L R
Sbjct: 144 --IVEVARSGVVGLSR 157

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>ILVH_SALTY (P21622) Acetolactate synthase isozyme III small subunit (EC|
           2.2.1.6) (AHAS-III) (Acetohydroxy-acid synthase III
           small subunit) (ALS-III)
          Length = 163

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIESL V    D  L   TI   G ++VL+Q+ +QL+KLV+VL V +L + A VE
Sbjct: 24  SQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVE 83

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKI---VAAQRNLSK 342
           RE+ML+K+      R +V     +FR +++D++    T+++ G   K+   +A+ R+++K
Sbjct: 84  REIMLVKIQASGYGREEVKRNTEIFRGQIIDVTPTLYTVQLAGTSDKLDAFLASLRDVAK 143

Query: 343 FGIKEICRTGKIALRR 390
             I E+ R+G + L R
Sbjct: 144 --IVEVARSGVVGLSR 157

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>ILVH_BUCAI (P57320) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 158

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 43/134 (32%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIE++ +   +D  L   TI   G ++ ++Q+ +QL+KL++VL V  + + + +E
Sbjct: 24  SQRGYNIETITLAPTEDPTLSKMTIQTVGNEKAIEQIEKQLHKLIDVLRVVQIGQSSHIE 83

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFG- 348
           RE++L+K+ +   +R D+  +  VFR ++VDI+  +  L+++G   KI A  + +  F  
Sbjct: 84  REIVLLKVQINNHRRDDIKHITEVFRGQIVDITSATYILQLSGTTKKIDAFLKIIRNFSE 143

Query: 349 IKEICRTGKIALRR 390
           I E+ R+G + + R
Sbjct: 144 IIEVTRSGIVGISR 157

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>ILVH_BUCAP (O85294) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 158

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 45/136 (33%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIE++ V   +D +L   TI   G ++ ++Q+ +QL+KL++VL V  + + + +E
Sbjct: 24  SQRGYNIETITVAPTEDPSLSKMTIQTIGNEKSIEQIEKQLHKLIDVLRVIKVGQNSHIE 83

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKI---VAAQRNLSK 342
           RE+ML+K+     ++ DV  +  VFR ++VDI+  +  L++TG   K+   +   RN ++
Sbjct: 84  REIMLLKVQTNNCKKDDVKHITEVFRGQIVDITSTTYVLQITGTAKKLDSFLKIIRNTTE 143

Query: 343 FGIKEICRTGKIALRR 390
             I E+ R+G + + R
Sbjct: 144 --IIEMTRSGIVGIAR 157

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>ILVH_HAEIN (P45260) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 163

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
 Frame = +1

Query: 13  NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELML 186
           NIESL V    D  L   TI   G  + L+Q+ +QL+KLV+V  V +LS++  +ERE++L
Sbjct: 29  NIESLTVAPTDDPTLSRMTIEAVGDAQALEQIEKQLHKLVDVFKVVNLSEQEHIEREIVL 88

Query: 187 IKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNL-SKFGIKEIC 363
            K+      R ++  +A +FR ++VD++  S T++++G   K+ A    L  +  + EI 
Sbjct: 89  AKVRAVGSSRDEIKRLADIFRGQIVDVTPKSYTIQLSGTNDKVDAFISALKEETTLLEIV 148

Query: 364 RTGKIALRR 390
           R+G I++ R
Sbjct: 149 RSGLISVSR 157

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>ILVH_BUCBP (Q89AP8) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)|
           (Acetohydroxy-acid synthase small subunit) (ALS)
          Length = 159

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
 Frame = +1

Query: 1   SARG-NIESLAVGLNKDKAL--FTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           S RG NIES+ V   +D ++   TI   G  +V++Q+ +QL+KL++VL V ++  E   +
Sbjct: 25  SQRGYNIESITVAPTEDLSISKITIQTFGDKKVIEQIGKQLHKLIDVLKVTEIEDEEHFK 84

Query: 172 RELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKF-G 348
           RE+MLIK+N   DQ   V  +   FR  ++  + N   ++++G    +      + K   
Sbjct: 85  REIMLIKINNTYDQYRKVQDITNAFRGYIISATSNISIIQLSGTNKNLDTYIEIMKKLTN 144

Query: 349 IKEICRTGKIAL 384
           I EI R+G I++
Sbjct: 145 IIEISRSGIISI 156

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>ILV6_YEAST (P25605) Acetolactate synthase small subunit, mitochondrial|
           precursor (EC 2.2.1.6) (AHAS) (Acetohydroxy-acid
           synthase small subunit) (ALS)
          Length = 309

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 52/210 (24%)
 Frame = +1

Query: 1   SARG-NIESLAVGLN--KDKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVE 171
           +ARG NI+SL V     KD +  TIV+ G D V++Q   Q+  LV V  V D +    ++
Sbjct: 99  AARGFNIDSLVVCNTEVKDLSRMTIVLQGQDGVVEQARRQIEDLVPVYAVLDYTNSEIIK 158

Query: 172 RELMLIK-------------------------------------------------LNVE 204
           REL++ +                                                 L ++
Sbjct: 159 RELVMARISLLGTEYFEDLLLHHHTSTNAGAADSQELVAEIREKQFHPANLPASEVLRLK 218

Query: 205 PDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNLSKFGIKEICRTGKIAL 384
            +   D+  +   F  +VVDISE S  +E++  P +I A  + +  FG+ E  R+G +AL
Sbjct: 219 HEHLNDITNLTNNFGGRVVDISETSCIVELSAKPTRISAFLKLVEPFGVLECARSGMMAL 278

Query: 385 RREKIGATARFWGFSAASYPDLVEASRKNP 474
            R  +  +            ++V+ S+  P
Sbjct: 279 PRTPLKTSTEEAADEDEKISEIVDISQLPP 308

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>Y849_METTH (O26937) Hypothetical protein MTH849|
          Length = 403

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +1

Query: 91  LKQVIEQLNKLVNVLNVEDLSKEAQVERELMLIKLNVEPDQRADVMFVATVFRAKV 258
           +  V   L+K +N+  V+D+   A  ++ +++    V+PDQ AD++     F AK+
Sbjct: 58  MNTVTSVLDKRLNIFGVKDVKVRASGDQNVIVEIAGVQPDQVADIVGKPGKFEAKI 113

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>Y055_MYCLE (O33089) Hypothetical protein ML0055|
          Length = 573

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 26/105 (24%), Positives = 45/105 (42%)
 Frame = +1

Query: 157 EAQVERELMLIKLNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQRNL 336
           +A+++R++ L ++  + ++      +A V  AK + +++ S  +  TG PG         
Sbjct: 287 QAELDRQIGLTRVKTQIERYRAATMMAKVRAAKGMKVAQPSKHMIFTGPPG--------- 337

Query: 337 SKFGIKEICRTGKIALRREKIGATARFWGFSAASYPDLVEASRKN 471
                     TGK  + R      A   G    S P LVE SRK+
Sbjct: 338 ----------TGKTTIARVVANILA---GLGVISEPKLVETSRKD 369

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>DNLI_METMP (Q6LYM1) DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase|
           [ATP])
          Length = 573

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +1

Query: 103 IEQLNKLVNVLNVEDLSKEAQVERELMLIKLNVEPDQRADVMFVATVFR-AKVVDISENS 279
           +E+L K+VN + +EDL +E  +E +++L ++  E  Q ++   +    R  +VV I E+ 
Sbjct: 493 LEKLTKIVNEIKIEDLGEEVILEPKIVL-EVTYEEIQTSEKYEMGYALRFPRVVQIREDK 551

Query: 280 LTLEVT--GDPGKIVAAQRN 333
              ++    D  KI   +RN
Sbjct: 552 SINDINTLDDVKKIYEIERN 571

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>RL36_CAEEL (P49181) 60S ribosomal protein L36|
          Length = 103

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 25/68 (36%), Positives = 34/68 (50%)
 Frame = +1

Query: 16  IESLAVGLNKDKALFTIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKEAQVERELMLIKL 195
           IE LAVGLNK  A   + V       K V  +  K+V  L V +++  A  ER  +L  L
Sbjct: 5   IEGLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVREL-VREITGFAPYERR-VLEML 62

Query: 196 NVEPDQRA 219
            +  D+RA
Sbjct: 63  RISKDKRA 70

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>AHPF_SALTY (P19480) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-)|
           (Alkyl hydroperoxide reductase F52A protein)
          Length = 521

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 193 LNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQ 327
           L   P+ +AD +    V   K VDI  N+ T EV GD  K+V  +
Sbjct: 384 LEFAPEMKADQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLE 428

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>ARGB_SULAC (Q4JAQ2) Acetylglutamate/acetylaminoadipate kinase (EC 2.7.2.8) (EC|
           2.7.2.-) (NAG kinase) (AGK)
           (N-acetyl-L-glutamate/N-acetyl-L-aminoadipate
           5-phosphotransferase)
          Length = 261

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 21/99 (21%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
 Frame = +1

Query: 64  IVVSGTDRVLKQVIEQLNKLVNVLN----VEDLSKEAQVERELMLI------KLNVEPDQ 213
           ++    DRV++ +I+  NK++ V      V +LS +  +E + +        +   + + 
Sbjct: 10  VLKQNLDRVVQSIIKTNNKIIYVHGGGDQVTELSSKLGIEPKFVTSPEGIRSRYTTKEEL 69

Query: 214 RADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQR 330
              +M ++++ R  +  +S    ++ +TG  GK+V A+R
Sbjct: 70  EVFIMVMSSISRNILSRVSSYRNSIALTGADGKLVLAER 108

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>PEPB_SALTY (Q9RF52) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)|
          Length = 427

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
 Frame = +1

Query: 265 ISENSLTLEVTG--DPGKIVAAQRNLSKFGIKEICRTGKIALRREKIGATARFW------ 420
           I+ + +TL + G  D G I  A R +   GIK++  TG+     E+  A   FW      
Sbjct: 26  INNDGITLHLNGKDDLGLIQRAARKIDGLGIKQVALTGE-GWDTERCWA---FWAGYKGP 81

Query: 421 -GFSAASYPDLVEASRK---NPLTSVN 489
            G     +PDL +A R+   N LT ++
Sbjct: 82  KGVRTVMWPDLDDAQRQELDNRLTIID 108

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>PEPB_SALTI (Q8Z4N3) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)|
          Length = 427

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
 Frame = +1

Query: 265 ISENSLTLEVTG--DPGKIVAAQRNLSKFGIKEICRTGKIALRREKIGATARFW------ 420
           I+ + +TL + G  D G I  A R +   GIK++  TG+     E+  A   FW      
Sbjct: 26  INNDGITLHLNGKDDLGLIQRAARKIDGLGIKQVALTGE-GWDTERCWA---FWAGYKGP 81

Query: 421 -GFSAASYPDLVEASRK---NPLTSVN 489
            G     +PDL +A R+   N LT ++
Sbjct: 82  KGVRTVMWPDLDDAQRQELDNRLTIID 108

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>PEPB_SALCH (Q57LH5) Peptidase B (EC 3.4.11.23) (Aminopeptidase B)|
          Length = 427

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
 Frame = +1

Query: 265 ISENSLTLEVTG--DPGKIVAAQRNLSKFGIKEICRTGKIALRREKIGATARFW------ 420
           I+ + +TL + G  D G I  A R +   GIK++  TG+     E+  A   FW      
Sbjct: 26  INNDGITLHLNGKDDLGLIQRAARKIDGLGIKQVALTGE-GWDTERCWA---FWAGYKGP 81

Query: 421 -GFSAASYPDLVEASRK---NPLTSVN 489
            G     +PDL +A R+   N LT ++
Sbjct: 82  KGVRTVMWPDLDDAQRQELDNRLTIID 108

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>IF2_WOLTR (Q5GS99) Translation initiation factor IF-2|
          Length = 777

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
 Frame = +1

Query: 55  LFTIVVSGTDRVLKQVIEQLN--KLVNV-----LNVEDLSKEAQVEREL-MLIKLNVEPD 210
           +  IVV+  D V+KQ IE +N  K  NV     +N  D S+   VER +  L + ++ P+
Sbjct: 354 IVVIVVAADDGVMKQTIEAMNHAKAANVSIIVAINKIDRSQSGDVERIISSLPQYDLIPE 413

Query: 211 QRADVMFVATVFRAKVVDISE 273
           +    + V  V   K +++ +
Sbjct: 414 ELGGDVIVVPVSAKKKINLDK 434

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>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein|
           homolog (Fragment)
          Length = 3461

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = -2

Query: 423 SPETCSCSDLFTPQSNFSRPTNFFDPKFA*VPLCRNNFPRISSYLQS*AVLRNINNFRSE 244
           +P  CS  ++   Q NF  P +F +   A      NN P +++ L       +++ FR +
Sbjct: 299 TPTCCSTLNITQSQGNFLSPDSFVNNSHA-----ANNEPEVATCL-------SLDTFRKD 346

Query: 243 NSSYKH 226
           NSS  H
Sbjct: 347 NSSPVH 352

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>HSP1_TRAVT (Q7JIY0) Sperm protamine P1|
          Length = 49

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -1

Query: 85 CPSPRRRW*RGPYPC*APRRGTRCC 11
          C  PRRR  R    C A RR TRCC
Sbjct: 14 CCRPRRRCRRRRRSCRARRRATRCC 38

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>HSP1_SEMEN (Q9GJR3) Sperm protamine P1|
          Length = 49

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -1

Query: 85 CPSPRRRW*RGPYPC*APRRGTRCC 11
          C  PRRR  R    C A RR TRCC
Sbjct: 14 CCRPRRRCRRRRRSCRARRRATRCC 38

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>ADY3_YEAST (Q07732) Accumulates dyads protein 3|
          Length = 790

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 49  KALFTIVVSGTDRVLKQVIEQLNKL--VNVLNVEDLSKEAQVERELMLIKLNVEPDQRAD 222
           KAL   +    DR+  Q +E+LN +    +  +EDL KE   ER+    +LN+  D+   
Sbjct: 262 KALRQKLEEKDDRI--QELEELNSMNDAKLQRIEDLQKEFHNERKAASKRLNIVQDR--- 316

Query: 223 VMFVATVFRAKVVDISENSLT 285
                  FR ++  I E  +T
Sbjct: 317 -------FRKEIKKIREEKIT 330

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>ABCF2_HUMAN (Q9UG63) ATP-binding cassette sub-family F member 2 (Iron-inhibited|
           ABC transporter 2)
          Length = 623

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -1

Query: 463 AMLLQGLGKKQQKIPRNVQLLRSFHASKQFFPSDK 359
           +MLL  +GK++  IP ++ +   +H +++  PSDK
Sbjct: 125 SMLLSAIGKREVPIPEHIDI---YHLTREMPPSDK 156

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>AHPF_ECOLI (P35340) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-)|
           (Alkyl hydroperoxide reductase F52A protein)
          Length = 521

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 193 LNVEPDQRADVMFVATVFRAKVVDISENSLTLEVTGDPGKIVAAQ 327
           L   P+ +AD +    +   K VDI  N+ T EV GD  K+V  +
Sbjct: 384 LEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLE 428

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>RL2_METKA (Q8TY93) 50S ribosomal protein L2P|
          Length = 243

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = -2

Query: 129 VDKLIELLNDLLEH-PV-RPRDDDGEEGLILVEPHGEGLDVASC 4
           V K++ELL+D   + PV R R +DGEE LILV    +  D+  C
Sbjct: 43  VGKVVELLHDPARNAPVARVRFEDGEERLILVPEGTKVGDIIEC 86

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>PHEB_CLOAB (Q97JN9) ACT domain protein pheB|
          Length = 155

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 61  TIVVSGTDRVLKQVIEQLNKLVNVLNVEDLSKE 159
           T  +SG    +K ++E+L K+ NVL VE ++ E
Sbjct: 123 TFDISGISGDVKNIVEELKKIKNVLKVEIVAME 155

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>GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 745

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
 Frame = -2

Query: 384 QSNFSRP-TNFFDPKFA*VPLCRNNFPRISSYLQS*AVLRNINNFRSENSSYKHDISTLI 208
           + NF R  +   D   A   LC+   PR+S++LQ          FR     +K + +   
Sbjct: 552 ERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRMLLVWFKREFNYDD 611

Query: 207 WFNI------EFY--KHELSFNLSLLR-----*IFNIQDVDKLIELLNDL 97
            FNI      +FY  +++L F L++L+      + N+Q  D++I+  NDL
Sbjct: 612 IFNIWEVFFTDFYSSQYQLFFMLAILQKNSSPIVNNLQTFDQVIKYFNDL 661

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>Y181_METJA (Q57640) Hypothetical protein MJ0181|
          Length = 246

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 373 KIALRREKIGATARFWGFSAASYPDLVEASRKNPLTSVN 489
           ++++  ++ G T  FW +   +Y DL+E +  NP    N
Sbjct: 199 ELSIELKEAGITVDFWEYIKNNYEDLIEENYPNPYPFTN 237

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>POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2512

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = -2

Query: 387  PQSNFSRPTNFFDPKFA*VPLCRN----NFPRISSY 292
            P  + S P N+ DP+FA V +C N    N+P ++SY
Sbjct: 2006 PLYSSSVPANYSDPQFA-VAVCNNYLHENYPTVASY 2040


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.133    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,969,405
Number of Sequences: 219361
Number of extensions: 1249971
Number of successful extensions: 4030
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result